AT1G24510
TCP Family

assists the folding of proteins upon ATP hydrolysis

Basic Information

Type: gene
Biological Identity
arabidopsis_thaliana
1
Physical Location & Seq
Reverse (-)
8685271 .. 8688247
2977 bp
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UTR
Exon/CDS
Intron
AT1G24510.2

Sequence Viewer

Length: 1608 bp
ATGGCGCTGGCGTTCGATGAGTTCGGGCGTCCGTTCATTATACTGAGAGAGCAAGATCAAAAGACTCGTCTTAGAGGAATCGATGCTCAGAAAGCCAATATCGCCGCTGGTAAAGCCGTGGCTCGGATCCTTCGATCCTCTCTTGGACCCAAAGGAATGGATAAGATGCTTCAAGGACCTGACGGAGACATCACCATCACAAACGATGGTGCTACGATATTGGAGCAAATGGATGTTGACAACCAGATTGCGAAACTAATGGTGGAACTGTCGCGGAGTCAGGATTATGAAATTGGTGATGGAACAACAGGTGTTGTTGTTATGGCTGGTGCACTTCTTGAGCAAGCTGAACGTCAGTTAGATAGAGGAATTCATCCCATTCGTATTGCTGAAGGATATGAGATGGCTTCTAGGGTGGCTGTTGAGCATTTGGAGCGTATTGCCCAAAAGTTTGAATTCGATGTTAATAATTATGAGCCTCTGGTTCAGACTTGCATGACTACTCTGTCCTCGAAGATTGTGAATCGATGCAAGCGCAGCTTAGCTGAGATTGCTGTTAAAGCGGTTCTTGCTGTTGCTGATTTAGAGAGGAGGGATGTTAACTTAGATCTGATCAAAGTAGAGGGGAAAGTTGGGGGAAAGTTGGAGGACACTGAGCTTATTTATGGAATACTGATTGACAAAGATATGAGTCATCCGCAAATGCCAAAGCAGATTGAAGATGCCCACATTGCCATTTTGACTTGTCCCTTTGAGCCACCGAAGCCGAAGACTAAGCATAAGGTGGACATTGATACAGTGGAAAAGTTTGAGACATTGCGCAAGCAAGAGCAGCAATATTTCGATGAGATGGTACAAAAGTGCAAGGATGTTGGTGCTACGCTGGTTATTTGCCAATGGGGATTCGATGATGAGGCAAACCATCTATTGATGCACAGGAATTTGCCTGCTGTCAGATGGGTAGGGGGTGTTGAATTAGAACTTATCGCAATAGCCACAGGCGGTAGAATTGTTCCAAGATTCCAGGAGTTGACCCCAGAGAAGTTAGGGAAGGCTGGCGTGGTTCGTGAGAAATCTTTTGGCACAACAAAAGAACGAATGCTGTATATTGAGCACTGTGCGAACTCAAAAGCTGTCACTGTTTTCATCCGTGGAGGTAACAAAATGATGATAGAAGAGACGAAACGTAGTATCCACGATGCTCTGTGTGTGGCTAGGAATCTCATCCGCAACAAATCAATTGTTTATGGAGGTGGGGCAGCTGAAATCGCTTGCTCACTTGCGGTTGATGCAGCTGCTGATAAATACCCTGGCGTGGAGCAGTATGCAATTAGGGCGTTTGCAGAAGCTTTGGACTCTGTCCCTATGGCTCTTGCAGAGAACAGTGGATTACAGCCCATTGAGACACTCTCTGCGGTTAAATCTCAGCAAATTAAGGAGAATATTCCCTTCTATGGAATAGATTGCAATGACGTGGGAACAAACGATATGAGGGAGCAAAATGTGTTTGAAACATTGATCGGGAAACAGCAACAAATTTTGCTAGCTACGCAAGTCGTTAAGATGATTCTAAAGATCGACGATGTCATCTCCAATTCTGAATACTGA

Protein Analysis

535

Amino Acids

59.38

Weight (kDa)

5.46

Isoelectric Point (pI)

44.58

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Cpn60_TCP1 PF00118 1 - 456 2.1e-145 TCP-1/cpn60 chaperonin family
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0015408)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G24510 AT1G24510 AT1G24510
fragaria_vesca FvH4_5g28870
malus_domestica MD13G1106100.v1.1 MD16G1106300.v1.1
prunus_persica Prupe.1G240000_v2.0.a1
pyrus_communis pycom13g09210 pycom16g09050
rosa_chinensis RchiOBHm_Chr4g0432301
rosa_laevigata RLG00000006854
rosa_multiflora Rmu_sc0001084.1_g000043
rosa_roxburghii Rroxscaffold_5G00373760
rosa_rugosa Rorug04G0256900
rosa_samantha Rh4DG316300
rosa_wichuraiana Rw4G027230

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 1 cut(s) 505
Acc16I TGCGCA 1 cut(s) 821
AccII CGCG 1 cut(s) 274
AciI CCGC 8 cut(s) 105, 274, 563, 698, 1002, 1228, 1283, 1415
AclWI GGATC 3 cut(s) 121, 129, 134
AcsI RAATTY 4 cut(s) 369, 455, 940, 1536
AcuI CTGAAG 1 cut(s) 411
AcyI GRCGYC 1 cut(s) 28
AfaI GTAC 1 cut(s) 855
AfiI CCNNNNNNNGG 3 cut(s) 123, 1315, 1454
AgsI TTSAA 5 cut(s) 173, 455, 719, 974, 1511
AjiI CACGTC 1 cut(s) 1474
AjnI CCWGG 2 cut(s) 1023, 1309
AluBI AGCT 9 cut(s) 347, 540, 545, 658, 1133, 1262, 1295, 1349, 1547
AluI AGCT 9 cut(s) 347, 540, 545, 658, 1133, 1262, 1295, 1349, 1547
Alw21I GWGCWC 2 cut(s) 334, 1116
Alw26I GTCTC 4 cut(s) 180, 806, 1172, 1397
Alw44I GTGCAC 1 cut(s) 330
AlwI GGATC 3 cut(s) 121, 129, 134
AlwNI CAGNNNCTG 1 cut(s) 1298
ApaLI GTGCAC 1 cut(s) 330
ApeKI GCWGC 5 cut(s) 537, 832, 1259, 1292, 1295
ApoI RAATTY 4 cut(s) 369, 455, 940, 1536
ArsI GACNNNNNNTTYG 2 cut(s) 52, 84
AspLEI GCGC 3 cut(s) 7, 537, 822
AspS9I GGNCC 2 cut(s) 146, 176
AsuHPI GGTGA 2 cut(s) 184, 308
AsuNHI GCTAGC 1 cut(s) 1543
AvaII GGWCC 2 cut(s) 146, 176
BaeGI GKGCMC 1 cut(s) 334
BaeI ACNNNNGTAYC 2 cut(s) 845, 878
BamHI GGATCC 1 cut(s) 126
BbsI GAAGAC 1 cut(s) 776
Bbv12I GWGCWC 2 cut(s) 334, 1116
BbvI GCAGC 5 cut(s) 549, 844, 1271, 1282, 1304
BccI CCATC 7 cut(s) 200, 203, 293, 397, 844, 930, 951
BceAI ACGGC 1 cut(s) 101
BciT130I CCWGG 2 cut(s) 1025, 1311
BciVI GTATCC 1 cut(s) 1202
BclI TGATCA 1 cut(s) 612
BcoDI GTCTC 4 cut(s) 180, 806, 1172, 1397
BfaI CTAG 3 cut(s) 411, 1215, 1544
BfoI RGCGCY 1 cut(s) 8
BfuI GTATCC 1 cut(s) 1202
BglII AGATCT 1 cut(s) 607
BisI GCNGC 6 cut(s) 105, 538, 833, 1260, 1293, 1296
BlpI GCTNAGC 1 cut(s) 541
BlsI GCNGC 6 cut(s) 106, 539, 834, 1261, 1294, 1297
Bme1390I CCNGG 2 cut(s) 1025, 1311
Bme18I GGWCC 2 cut(s) 146, 176
BmgBI CACGTC 1 cut(s) 1474
BmgT120I GGNCC 2 cut(s) 146, 176
BmiI GGNNCC 2 cut(s) 128, 148
BmrFI CCNGG 2 cut(s) 1025, 1311
BmsI GCATC 7 cut(s) 73, 156, 518, 712, 921, 1189, 1279
BmtI GCTAGC 1 cut(s) 1547
BpiI GAAGAC 1 cut(s) 776
BplI GAGNNNNNCTC 2 cut(s) 1394, 1426
Bpu1102I GCTNAGC 1 cut(s) 541
BpuEI CTTGAG 1 cut(s) 359
Bsa29I ATCGAT 2 cut(s) 81, 526
BsaHI GRCGYC 1 cut(s) 28
BsaJI CCNNGG 3 cut(s) 117, 1150, 1309
Bsc4I CCNNNNNNNGG 3 cut(s) 123, 1315, 1454
Bse3DI GCAATG 3 cut(s) 729, 815, 1474
BseBI CCWGG 2 cut(s) 1025, 1311
BseCI ATCGAT 2 cut(s) 81, 526
BseDI CCNNGG 3 cut(s) 117, 1150, 1309
BseGI GGATG 7 cut(s) 238, 373, 601, 694, 874, 1146, 1224
BseLI CCNNNNNNNGG 3 cut(s) 123, 1315, 1454
BseMI GCAATG 3 cut(s) 729, 815, 1474
BseMII CTCAG 5 cut(s) 35, 101, 537, 645, 1439
BseRI GAGGAG 1 cut(s) 604
BseSI GKGCMC 1 cut(s) 334
BseXI GCAGC 5 cut(s) 549, 844, 1271, 1282, 1304
Bsh1236I CGCG 1 cut(s) 274
BshVI ATCGAT 2 cut(s) 81, 526
BsiHKAI GWGCWC 2 cut(s) 334, 1116
BslFI GGGAC 2 cut(s) 732, 1346
BslI CCNNNNNNNGG 3 cut(s) 123, 1315, 1454
BsmAI GTCTC 4 cut(s) 180, 806, 1172, 1397
BsmBI CGTCTC 1 cut(s) 1172
BsmFI GGGAC 2 cut(s) 732, 1346
BsmI GAATGC 1 cut(s) 1104
Bsp1286I GDGCHC 2 cut(s) 334, 1116
Bsp143I GATC 7 cut(s) 55, 126, 134, 607, 612, 1518, 1575
Bsp1720I GCTNAGC 1 cut(s) 541
BspACI CCGC 8 cut(s) 105, 274, 563, 698, 1002, 1228, 1283, 1415
BspCNI CTCAG 5 cut(s) 36, 100, 538, 646, 1438
BspDI ATCGAT 2 cut(s) 81, 526
BspFNI CGCG 1 cut(s) 274
BspLI GGNNCC 2 cut(s) 128, 148
BspOI GCTAGC 1 cut(s) 1547
BspPI GGATC 3 cut(s) 121, 129, 134
BsrDI GCAATG 3 cut(s) 729, 815, 1474
BssECI CCNNGG 3 cut(s) 117, 1150, 1309
BssMI GATC 7 cut(s) 55, 126, 134, 607, 612, 1518, 1575
BssNI GRCGYC 1 cut(s) 28
Bst2UI CCWGG 2 cut(s) 1025, 1311
Bst4CI ACNGT 5 cut(s) 270, 799, 1118, 1141, 1385
Bst6I CTCTTC 1 cut(s) 1170
BstACI GRCGYC 1 cut(s) 28
BstC8I GCNNGC 8 cut(s) 9, 345, 533, 824, 948, 1057, 1273, 1545
BstDEI CTNAG 9 cut(s) 44, 71, 87, 541, 546, 604, 654, 774, 1425
BstDSI CCRYGG 2 cut(s) 117, 1150
BstF5I GGATG 7 cut(s) 238, 373, 601, 694, 874, 1146, 1224
BstFNI CGCG 1 cut(s) 274
BstH2I RGCGCY 1 cut(s) 8
BstHHI GCGC 3 cut(s) 7, 537, 822
BstKTI GATC 7 cut(s) 58, 129, 137, 610, 615, 1521, 1578
BstMAI GTCTC 4 cut(s) 180, 806, 1172, 1397
BstMBI GATC 7 cut(s) 55, 126, 134, 607, 612, 1518, 1575
BstNI CCWGG 2 cut(s) 1025, 1311
BstSCI CCNGG 2 cut(s) 1023, 1309
BstSLI GKGCMC 1 cut(s) 334
BstUI CGCG 1 cut(s) 274
BstV1I GCAGC 5 cut(s) 549, 844, 1271, 1282, 1304
BstV2I GAAGAC 1 cut(s) 776
BstX2I RGATCY 2 cut(s) 126, 607
BstXI CCANNNNNNTGG 1 cut(s) 157
BstYI RGATCY 2 cut(s) 126, 607
Bsu15I ATCGAT 2 cut(s) 81, 526
BsuI GTATCC 1 cut(s) 1202
BsuTUI ATCGAT 2 cut(s) 81, 526
BtgI CCRYGG 2 cut(s) 117, 1150
BtrI CACGTC 1 cut(s) 1474
BtsCI GGATG 7 cut(s) 238, 373, 601, 694, 874, 1146, 1224
BtsIMutI CAGTG 5 cut(s) 651, 804, 1114, 1137, 1390
Cac8I GCNNGC 8 cut(s) 9, 345, 533, 824, 948, 1057, 1273, 1545
CaiI CAGNNNCTG 1 cut(s) 1298
CfoI GCGC 3 cut(s) 7, 537, 822
Cfr13I GGNCC 2 cut(s) 146, 176
ClaI ATCGAT 2 cut(s) 81, 526
CseI GACGC 1 cut(s) 17
Csp6I GTAC 1 cut(s) 854
CviAII CATG 1 cut(s) 496
CviQI GTAC 1 cut(s) 854
DdeI CTNAG 9 cut(s) 44, 71, 87, 541, 546, 604, 654, 774, 1425
DpnI GATC 7 cut(s) 57, 128, 136, 609, 614, 1520, 1577
DpnII GATC 7 cut(s) 55, 126, 134, 607, 612, 1518, 1575
DrdI GACNNNNNNGTC 1 cut(s) 505
DseDI GACNNNNNNGTC 1 cut(s) 505
Eam1104I CTCTTC 1 cut(s) 1170
EarI CTCTTC 1 cut(s) 1170
Eco47I GGWCC 2 cut(s) 146, 176
Eco57I CTGAAG 1 cut(s) 411
EcoO109I RGGNCCY 1 cut(s) 176
EcoRI GAATTC 2 cut(s) 369, 455
EcoRII CCWGG 2 cut(s) 1023, 1309
Esp3I CGTCTC 1 cut(s) 1172
FaeI CATG 1 cut(s) 499
FalI AAGNNNNNCTT 4 cut(s) 524, 556, 552, 584
FaqI GGGAC 2 cut(s) 732, 1346
FatI CATG 1 cut(s) 495
FbaI TGATCA 1 cut(s) 612
Fnu4HI GCNGC 6 cut(s) 105, 538, 833, 1260, 1293, 1296
FokI GGATG 7 cut(s) 245, 360, 608, 681, 881, 1133, 1211
Fsp4HI GCNGC 6 cut(s) 105, 538, 833, 1260, 1293, 1296
FspBI CTAG 3 cut(s) 411, 1215, 1544
FspI TGCGCA 1 cut(s) 821
GlaI GCGC 3 cut(s) 6, 536, 821
GluI GCNGC 6 cut(s) 105, 538, 833, 1260, 1293, 1296
HaeII RGCGCY 1 cut(s) 8
HgaI GACGC 1 cut(s) 17
HhaI GCGC 3 cut(s) 7, 537, 822
Hin1I GRCGYC 1 cut(s) 28
Hin1II CATG 1 cut(s) 499
Hin6I GCGC 3 cut(s) 5, 535, 820
HinP1I GCGC 3 cut(s) 5, 535, 820
HincII GTYRAC 3 cut(s) 238, 601, 1032
HindII GTYRAC 3 cut(s) 238, 601, 1032
HindIII AAGCTT 1 cut(s) 1347
HpaI GTTAAC 1 cut(s) 601
HphI GGTGA 2 cut(s) 184, 308
Hpy166II GTNNAC 5 cut(s) 238, 332, 601, 787, 1032
Hpy188I TCNGA 6 cut(s) 90, 126, 489, 612, 956, 1600
Hpy188III TCNNGA 4 cut(s) 281, 338, 1067, 1522
Hpy8I GTNNAC 5 cut(s) 238, 332, 601, 787, 1032
Hpy99I CGWCG 1 cut(s) 1583
HpyAV CCTTC 4 cut(s) 140, 386, 1045, 1459
HpyCH4III ACNGT 5 cut(s) 270, 799, 1118, 1141, 1385
HpyCH4IV ACGT 3 cut(s) 352, 1186, 1473
HpyF3I CTNAG 9 cut(s) 44, 71, 87, 541, 546, 604, 654, 774, 1425
HpySE526I ACGT 3 cut(s) 352, 1186, 1473
Hsp92I GRCGYC 1 cut(s) 28
Hsp92II CATG 1 cut(s) 499
HspAI GCGC 3 cut(s) 5, 535, 820
Ksp22I TGATCA 1 cut(s) 612
KspAI GTTAAC 1 cut(s) 601
Kzo9I GATC 7 cut(s) 55, 126, 134, 607, 612, 1518, 1575
LmnI GCTCC 4 cut(s) 223, 433, 1318, 1495
Lsp1109I GCAGC 5 cut(s) 549, 844, 1271, 1282, 1304
LweI GCATC 7 cut(s) 73, 156, 518, 712, 921, 1189, 1279
MaeI CTAG 3 cut(s) 411, 1215, 1544
MaeII ACGT 3 cut(s) 352, 1186, 1473
MaeIII GTNAC 2 cut(s) 1135, 1157
MalI GATC 7 cut(s) 57, 128, 136, 609, 614, 1520, 1577
MboI GATC 7 cut(s) 55, 126, 134, 607, 612, 1518, 1575
MboII GAAGA 4 cut(s) 526, 731, 781, 1187
MfeI CAATTG 1 cut(s) 1239
MflI RGATCY 2 cut(s) 126, 607
MhlI GDGCHC 2 cut(s) 334, 1116
MlyI GAGTC 4 cut(s) 58, 286, 700, 1349
MmeI TCCRAC 1 cut(s) 624
MseI TTAA 6 cut(s) 465, 558, 600, 1419, 1434, 1560
MspA1I CMGCKG 3 cut(s) 107, 1262, 1295
MspR9I CCNGG 2 cut(s) 1025, 1311
MunI CAATTG 1 cut(s) 1239
Mva1269I GAATGC 1 cut(s) 1104
MvaI CCWGG 2 cut(s) 1025, 1311
MvnI CGCG 1 cut(s) 274
NdeII GATC 7 cut(s) 55, 126, 134, 607, 612, 1518, 1575
NheI GCTAGC 1 cut(s) 1543
NlaIII CATG 1 cut(s) 499
NlaIV GGNNCC 2 cut(s) 128, 148
NmuCI GTSAC 1 cut(s) 1135
NsbI TGCGCA 1 cut(s) 821
PcsI WCGNNNNNNNCGW 1 cut(s) 130
PctI GAATGC 1 cut(s) 1104
PfeI GAWTC 6 cut(s) 78, 523, 903, 1020, 1219, 1567
PflFI GACNNNGTC 2 cut(s) 1358, 1583
PfoI TCCNGGA 1 cut(s) 1023
PkrI GCNGC 6 cut(s) 106, 539, 834, 1261, 1294, 1297
PleI GAGTC 4 cut(s) 58, 285, 699, 1349
PpsI GAGTC 4 cut(s) 58, 285, 699, 1349
PpuMI RGGWCCY 1 cut(s) 176
Psp5II RGGWCCY 1 cut(s) 176
Psp6I CCWGG 2 cut(s) 1023, 1309
PspGI CCWGG 2 cut(s) 1023, 1309
PspN4I GGNNCC 2 cut(s) 128, 148
PspPI GGNCC 2 cut(s) 146, 176
PspPPI RGGWCCY 1 cut(s) 176
PstNI CAGNNNCTG 1 cut(s) 1298
PsuI RGATCY 2 cut(s) 126, 607
PsyI GACNNNGTC 2 cut(s) 1358, 1583
PvuII CAGCTG 2 cut(s) 1262, 1295
RsaI GTAC 1 cut(s) 855
RsaNI GTAC 1 cut(s) 854
SaqAI TTAA 6 cut(s) 465, 558, 600, 1419, 1434, 1560
SatI GCNGC 6 cut(s) 105, 538, 833, 1260, 1293, 1296
Sau3AI GATC 7 cut(s) 55, 126, 134, 607, 612, 1518, 1575
Sau96I GGNCC 2 cut(s) 146, 176
SchI GAGTC 4 cut(s) 58, 286, 700, 1349
ScrFI CCNGG 2 cut(s) 1025, 1311
SduI GDGCHC 2 cut(s) 334, 1116
SfaNI GCATC 7 cut(s) 73, 156, 518, 712, 921, 1189, 1279
SinI GGWCC 2 cut(s) 146, 176
SmlI CTYRAG 1 cut(s) 338
SmoI CTYRAG 1 cut(s) 338
SsiI CCGC 8 cut(s) 105, 274, 563, 698, 1002, 1228, 1283, 1415
SspI AATATT 2 cut(s) 839, 1444
SspMI CTAG 3 cut(s) 411, 1215, 1544
StyD4I CCNGG 2 cut(s) 1023, 1309
TaaI ACNGT 5 cut(s) 270, 799, 1118, 1141, 1385
TaiI ACGT 3 cut(s) 355, 1189, 1476
TaqI TCGA 9 cut(s) 15, 81, 133, 459, 512, 526, 843, 906, 1578
TauI GCSGC 1 cut(s) 107
TfiI GAWTC 6 cut(s) 78, 523, 903, 1020, 1219, 1567
Tru1I TTAA 6 cut(s) 465, 558, 600, 1419, 1434, 1560
Tru9I TTAA 6 cut(s) 465, 558, 600, 1419, 1434, 1560
TscAI CASTG 5 cut(s) 658, 804, 1121, 1144, 1390
TseFI GTSAC 1 cut(s) 1135
TseI GCWGC 5 cut(s) 537, 832, 1259, 1292, 1295
Tsp45I GTSAC 1 cut(s) 1135
TspDTI ATGAA 4 cut(s) 25, 303, 362, 1135
TspGWI ACGGA 3 cut(s) 21, 198, 1139
TspRI CASTG 5 cut(s) 658, 804, 1121, 1144, 1390
Tth111I GACNNNGTC 2 cut(s) 1358, 1583
VneI GTGCAC 1 cut(s) 330
VpaK11BI GGWCC 2 cut(s) 146, 176
XapI RAATTY 4 cut(s) 369, 455, 940, 1536
XspI CTAG 3 cut(s) 411, 1215, 1544
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.