FvH4_5g28870
TCP Family

TCP-1/cpn60 chaperonin family

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
fragaria_vesca
Fvb5
OG0015408
Physical Location & Seq
Forward (+)
19980241 .. 19984283
4043 bp
Loading structure...
UTR
Exon/CDS
Intron
FvH4_5g28870.t1

Sequence Viewer

Length: 1608 bp
ATGGCGCTGGCCTTCGATGAGTTCGGCCGGCCGTTCATTATCCTCCGGGAGCAGGAGCAGAAGTCGCGATTGCGCGGCCTCGATGCTCAGAAGGCTAACATTGCCGCCGGTAAAGCCGTCGGCAAAATCCTCCGCACCTCGCTCGGACCCAAAGGCATGGACAAGATGCTCCAGAGCCCCGACGGCGAGGTCACCGTCACAAATGATGGCGCCACCATCTTGGAGCAGATGGATGTTGACAATCAAATTGCAAAGCTGATGGTTGAGCTTTCGCGGAGTCAGGACTATGAAATTGGCGATGGGACAACTGGAGTGGTTGTGTTGGCCAGTTCACTTCTGGAGCAGGCGGAGCGGCTCTTGGAACGTGGTATTCATCCCATTAGGGTTGCTGAGGGATATGAAATGGCATCCAGGATAGCTTTTGATCATTTGCAGCATATATCGAAGAAATTTGAATTTGGAGTGGAAAATATTGAGCCTTTGGTTCAGACTTGCATGACTACTTTGTCATCAAAGATAGTCAATCGGTGCAAGCGCTCCCTTGCTGAGATTGCTGTCAAAGCAGTTCTTGCTGTTGCTGATTTAGAGAGGAAGGATGTGAACCTTGATTTGATCAAAGTAGAAGGGAAAGTAGGTGGCAAGTTAGAAGATACTGAGCTGGTTTATGGTATTCTTATTGACAAGGATATGAGCCATCCACAAATGCCCAAGCGAATTGAAGATGCAAAAATTGCTATCTTGACCTGTCCCTTTGAGCCACCGAAACCAAAGACAAAGCATAAGGTTGATATTGATACAGTGGAAAAGTTTCAGACTCTACGTGTGCAAGAACAGGAGTACTTTGATCAGATGGTTCAAAAATGCAAGGATGCTGGTGCTACCTTGGTCATCTGCCAATGGGGGTTTGATGATGAAGCCAATCACCTATTGATGCACAGGAACTTGCCTGCTGTTAGATGGGTCGGTGGTGTTGAGTTGGAACTAATTGCAATAGCTACAGGGGGAAGAATTGTGCCTAGGTTCCAAGAGTTGACACCGGATAAATTGGGGAAGGCTGGCTTGGTTCGTGAAAAATCATTTGGTACTACAAAAGATCGAATGCTGTACATTGAACACTGTGCAAATTCAAGGGCTGTAACCATATTTATCCGCGGAGGTAACAAAATGATGATAGAGGAGACCAAGCGTAGTATCCACGATGCTCTGTGTGTTGCCAGGAATCTTATTCGCAATAATTCTATTGTCTATGGTGGTGGCTCGGCAGAGATATCTTGCTCTGTTGCCGTAGAAGCAGCTGCAGATAAACACCCAGGAGTTGAGCAATATGCTATCAGAGCATTTGCAGACGCTTTGGATGCTGTTCCCATGGCACTTGCAGAGAATAGTGGCCTTCAACCTATTGAAACACTAAATGCAGTGAAGTCCCAGCAGATTAAGGAGAAAAATCCCCACTGTGGAATAGACTGCAATGATGTTGGCACTAATGATATGCGTGAGCAGAATGTGTTTGAGACTTTAATTGGAAAGCAACAGCAGATCTTACTCGCCACCCAAGTTGTCAAGATGATACTTAAAATAGATGATGTTATCTCCCCCTCCGAGTACTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
Cpn60_TCP1

Protein Analysis

536

Amino Acids

59.2

Weight (kDa)

5.8

Isoelectric Point (pI)

44.53

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Cpn60_TCP1 PF00118 42 - 531 7.8e-166 TCP-1/cpn60 chaperonin family
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0015408)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G24510 AT1G24510 AT1G24510
fragaria_vesca FvH4_5g28870
malus_domestica MD13G1106100.v1.1 MD16G1106300.v1.1
prunus_persica Prupe.1G240000_v2.0.a1
pyrus_communis pycom13g09210 pycom16g09050
rosa_chinensis RchiOBHm_Chr4g0432301
rosa_laevigata RLG00000006854
rosa_multiflora Rmu_sc0001084.1_g000043
rosa_roxburghii Rroxscaffold_5G00373760
rosa_rugosa Rorug04G0256900
rosa_samantha Rh4DG316300
rosa_wichuraiana Rw4G027230

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 2 cut(s) 188, 505
AccB1I GGYRCC 1 cut(s) 209
AccBSI CCGCTC 1 cut(s) 352
AccII CGCG 4 cut(s) 67, 75, 274, 1152
AciI CCGC 8 cut(s) 75, 105, 133, 274, 347, 352, 1150, 1152
AcoI YGGCCR 3 cut(s) 25, 29, 324
AcsI RAATTY 3 cut(s) 449, 455, 1123
AcyI GRCGYC 1 cut(s) 210
AfaI GTAC 4 cut(s) 839, 1084, 1106, 1604
AfeI AGCGCT 1 cut(s) 536
AfiI CCNNNNNNNGG 2 cut(s) 52, 1454
AflIII ACRYGT 1 cut(s) 820
AgsI TTSAA 7 cut(s) 455, 719, 857, 1112, 1128, 1394, 1403
AjnI CCWGG 3 cut(s) 410, 1214, 1309
AjuI GAANNNNNNNTTGG 4 cut(s) 1043, 1062, 1075, 1094
AluBI AGCT 6 cut(s) 256, 268, 419, 658, 995, 1295
AluI AGCT 6 cut(s) 256, 268, 419, 658, 995, 1295
Alw26I GTCTC 2 cut(s) 1172, 1505
Aor51HI AGCGCT 1 cut(s) 536
AoxI GGCC 6 cut(s) 9, 25, 29, 76, 324, 1387
ApeKI GCWGC 3 cut(s) 433, 1292, 1295
ApoI RAATTY 3 cut(s) 449, 455, 1123
Asp700I GAANNNNTTC 1 cut(s) 807
AspA2I CCTAGG 1 cut(s) 1016
AspLEI GCGC 4 cut(s) 7, 75, 212, 537
AspS9I GGNCC 1 cut(s) 146
AsuC2I CCSGG 1 cut(s) 47
AsuHPI GGTGA 2 cut(s) 184, 914
AvaII GGWCC 1 cut(s) 146
AvrII CCTAGG 1 cut(s) 1016
BalI TGGCCA 1 cut(s) 326
BanI GGYRCC 1 cut(s) 209
BanII GRGCYC 1 cut(s) 179
BbvCI CCTCAGC 1 cut(s) 390
BbvI GCAGC 3 cut(s) 445, 1282, 1304
BccI CCATC 8 cut(s) 200, 223, 224, 253, 293, 702, 844, 951
BceAI ACGGC 4 cut(s) 16, 101, 199, 1268
BcgI CGANNNNNNTGC 2 cut(s) 124, 158
BciT130I CCWGG 3 cut(s) 412, 1216, 1311
BciVI GTATCC 1 cut(s) 1202
BclI TGATCA 3 cut(s) 424, 612, 844
BcnI CCSGG 1 cut(s) 47
BcoDI GTCTC 2 cut(s) 1172, 1505
BfaI CTAG 1 cut(s) 1017
BfmI CTRYAG 2 cut(s) 996, 1296
BfoI RGCGCY 3 cut(s) 8, 213, 538
BfuI GTATCC 1 cut(s) 1202
BglI GCCNNNNNGGC 1 cut(s) 183
BglII AGATCT 1 cut(s) 1536
BisI GCNGC 6 cut(s) 76, 105, 353, 434, 1293, 1296
BlnI CCTAGG 1 cut(s) 1016
BlsI GCNGC 6 cut(s) 77, 106, 354, 435, 1294, 1297
BmcAI AGTACT 2 cut(s) 839, 1604
Bme1390I CCNGG 4 cut(s) 47, 412, 1216, 1311
Bme18I GGWCC 1 cut(s) 146
BmgT120I GGNCC 1 cut(s) 146
BmiI GGNNCC 3 cut(s) 148, 211, 1022
BmrFI CCNGG 4 cut(s) 47, 412, 1216, 1311
BmsI GCATC 8 cut(s) 73, 156, 416, 712, 859, 921, 1189, 1345
BpmI CTGGAG 3 cut(s) 155, 330, 359
Bpu10I CCTNAGC 1 cut(s) 390
BpuMI CCSGG 1 cut(s) 47
BsaAI YACGTR 1 cut(s) 821
BsaHI GRCGYC 1 cut(s) 210
BsaI GGTCTC 1 cut(s) 1172
BsaJI CCNNGG 5 cut(s) 882, 1016, 1150, 1309, 1365
BsaWI WCCGGW 1 cut(s) 1036
BsaXI ACNNNNNCTCC 4 cut(s) 47, 77, 303, 333
Bsc4I CCNNNNNNNGG 2 cut(s) 52, 1454
Bse118I RCCGGY 2 cut(s) 27, 107
Bse1I ACTGG 2 cut(s) 313, 327
Bse3DI GCAATG 2 cut(s) 99, 1474
BseBI CCWGG 3 cut(s) 412, 1216, 1311
BseDI CCNNGG 5 cut(s) 882, 1016, 1150, 1309, 1365
BseGI GGATG 7 cut(s) 238, 373, 407, 601, 694, 874, 1360
BseLI CCNNNNNNNGG 2 cut(s) 52, 1454
BseMI GCAATG 2 cut(s) 99, 1474
BseMII CTCAG 4 cut(s) 101, 381, 537, 645
BseNI ACTGG 2 cut(s) 313, 327
BseRI GAGGAG 1 cut(s) 1190
BseX3I CGGCCG 2 cut(s) 25, 29
BseXI GCAGC 3 cut(s) 445, 1282, 1304
BseYI CCCAGC 1 cut(s) 1425
Bsh1236I CGCG 4 cut(s) 67, 75, 274, 1152
Bsh1285I CGRYCG 2 cut(s) 28, 32
BshFI GGCC 6 cut(s) 11, 27, 31, 78, 326, 1389
BshNI GGYRCC 1 cut(s) 209
BsiEI CGRYCG 2 cut(s) 28, 32
BsiSI CCGG 4 cut(s) 28, 46, 108, 1037
BslFI GGGAC 3 cut(s) 316, 732, 1408
BslI CCNNNNNNNGG 2 cut(s) 52, 1454
BsmAI GTCTC 2 cut(s) 1172, 1505
BsmFI GGGAC 3 cut(s) 316, 732, 1408
BsmI GAATGC 1 cut(s) 1104
BsnI GGCC 6 cut(s) 11, 27, 31, 78, 326, 1389
Bso31I GGTCTC 1 cut(s) 1172
Bsp1286I GDGCHC 1 cut(s) 179
Bsp1407I TGTACA 1 cut(s) 1104
Bsp143I GATC 5 cut(s) 424, 612, 844, 1093, 1536
Bsp19I CCATGG 1 cut(s) 1365
Bsp68I TCGCGA 1 cut(s) 67
BspACI CCGC 8 cut(s) 75, 105, 133, 274, 347, 352, 1150, 1152
BspANI GGCC 6 cut(s) 11, 27, 31, 78, 326, 1389
BspCNI CTCAG 4 cut(s) 100, 382, 538, 646
BspFNI CGCG 4 cut(s) 67, 75, 274, 1152
BspLI GGNNCC 3 cut(s) 148, 211, 1022
BspMAI CTGCAG 1 cut(s) 1300
BspT107I GGYRCC 1 cut(s) 209
BspTNI GGTCTC 1 cut(s) 1172
BsrBI CCGCTC 1 cut(s) 352
BsrDI GCAATG 2 cut(s) 99, 1474
BsrFI RCCGGY 2 cut(s) 27, 107
BsrGI TGTACA 1 cut(s) 1104
BsrI ACTGG 2 cut(s) 313, 327
BssAI RCCGGY 2 cut(s) 27, 107
BssECI CCNNGG 5 cut(s) 882, 1016, 1150, 1309, 1365
BssMI GATC 5 cut(s) 424, 612, 844, 1093, 1536
BssNI GRCGYC 1 cut(s) 210
BssT1I CCWWGG 3 cut(s) 882, 1016, 1365
Bst2UI CCWGG 3 cut(s) 412, 1216, 1311
Bst4CI ACNGT 4 cut(s) 196, 799, 1118, 1454
BstACI GRCGYC 1 cut(s) 210
BstAPI GCANNNNNTGC 2 cut(s) 569, 731
BstAUI TGTACA 1 cut(s) 1104
BstBAI YACGTR 1 cut(s) 821
BstC8I GCNNGC 6 cut(s) 9, 29, 345, 533, 948, 1057
BstDEI CTNAG 4 cut(s) 87, 390, 546, 654
BstDSI CCRYGG 2 cut(s) 1150, 1365
BstEII GGTNACC 1 cut(s) 190
BstF5I GGATG 7 cut(s) 238, 373, 407, 601, 694, 874, 1360
BstFNI CGCG 4 cut(s) 67, 75, 274, 1152
BstH2I RGCGCY 3 cut(s) 8, 213, 538
BstHHI GCGC 4 cut(s) 7, 75, 212, 537
BstKTI GATC 5 cut(s) 427, 615, 847, 1096, 1539
BstMAI GTCTC 2 cut(s) 1172, 1505
BstMBI GATC 5 cut(s) 424, 612, 844, 1093, 1536
BstMCI CGRYCG 2 cut(s) 28, 32
BstNI CCWGG 3 cut(s) 412, 1216, 1311
BstPI GGTNACC 1 cut(s) 190
BstSCI CCNGG 4 cut(s) 45, 410, 1214, 1309
BstSFI CTRYAG 2 cut(s) 996, 1296
BstUI CGCG 4 cut(s) 67, 75, 274, 1152
BstV1I GCAGC 3 cut(s) 445, 1282, 1304
BstX2I RGATCY 1 cut(s) 1536
BstXI CCANNNNNNTGG 2 cut(s) 157, 220
BstYI RGATCY 1 cut(s) 1536
BstZI CGGCCG 2 cut(s) 25, 29
BsuI GTATCC 1 cut(s) 1202
BsuRI GGCC 6 cut(s) 11, 27, 31, 78, 326, 1389
BtgI CCRYGG 2 cut(s) 1150, 1365
BtgZI GCGATG 1 cut(s) 312
BtsCI GGATG 7 cut(s) 238, 373, 407, 601, 694, 874, 1360
BtsI GCAGTG 1 cut(s) 1422
BtsIMutI CAGTG 4 cut(s) 804, 1114, 1422, 1450
BtuMI TCGCGA 1 cut(s) 67
Cac8I GCNNGC 6 cut(s) 9, 29, 345, 533, 948, 1057
CfoI GCGC 4 cut(s) 7, 75, 212, 537
Cfr10I RCCGGY 2 cut(s) 27, 107
Cfr13I GGNCC 1 cut(s) 146
Cfr42I CCGCGG 1 cut(s) 1153
CseI GACGC 1 cut(s) 1355
Csp6I GTAC 4 cut(s) 838, 1083, 1105, 1603
CspCI CAANNNNNGTGG 4 cut(s) 294, 329, 1537, 1572
CviAII CATG 3 cut(s) 157, 496, 1366
CviQI GTAC 4 cut(s) 838, 1083, 1105, 1603
DdeI CTNAG 4 cut(s) 87, 390, 546, 654
DinI GGCGCC 1 cut(s) 211
DpnI GATC 5 cut(s) 426, 614, 846, 1095, 1538
DpnII GATC 5 cut(s) 424, 612, 844, 1093, 1536
DrdI GACNNNNNNGTC 2 cut(s) 188, 505
DseDI GACNNNNNNGTC 2 cut(s) 188, 505
EaeI YGGCCR 3 cut(s) 25, 29, 324
EagI CGGCCG 2 cut(s) 25, 29
EciI GGCGGA 1 cut(s) 362
EclXI CGGCCG 2 cut(s) 25, 29
Eco130I CCWWGG 3 cut(s) 882, 1016, 1365
Eco24I GRGCYC 1 cut(s) 179
Eco31I GGTCTC 1 cut(s) 1172
Eco32I GATATC 1 cut(s) 1269
Eco47I GGWCC 1 cut(s) 146
Eco47III AGCGCT 1 cut(s) 536
Eco52I CGGCCG 2 cut(s) 25, 29
Eco91I GGTNACC 1 cut(s) 190
EcoO65I GGTNACC 1 cut(s) 190
EcoRII CCWGG 3 cut(s) 410, 1214, 1309
EcoRV GATATC 1 cut(s) 1269
EcoT14I CCWWGG 3 cut(s) 882, 1016, 1365
EcoT38I GRGCYC 1 cut(s) 179
EgeI GGCGCC 1 cut(s) 211
EheI GGCGCC 1 cut(s) 211
ErhI CCWWGG 3 cut(s) 882, 1016, 1365
FaeI CATG 3 cut(s) 160, 499, 1369
FalI AAGNNNNNCTT 4 cut(s) 552, 584, 1043, 1075
FaqI GGGAC 3 cut(s) 316, 732, 1408
FatI CATG 3 cut(s) 156, 495, 1365
FbaI TGATCA 3 cut(s) 424, 612, 844
Fnu4HI GCNGC 6 cut(s) 76, 105, 353, 434, 1293, 1296
FokI GGATG 7 cut(s) 245, 360, 394, 608, 681, 881, 1367
FriOI GRGCYC 1 cut(s) 179
FseI GGCCGGCC 1 cut(s) 31
Fsp4HI GCNGC 6 cut(s) 76, 105, 353, 434, 1293, 1296
FspBI CTAG 1 cut(s) 1017
GlaI GCGC 4 cut(s) 6, 74, 211, 536
GluI GCNGC 6 cut(s) 76, 105, 353, 434, 1293, 1296
GsaI CCCAGC 1 cut(s) 1429
GsuI CTGGAG 3 cut(s) 155, 330, 359
HaeII RGCGCY 3 cut(s) 8, 213, 538
HaeIII GGCC 6 cut(s) 11, 27, 31, 78, 326, 1389
HapII CCGG 4 cut(s) 28, 46, 108, 1037
HgaI GACGC 1 cut(s) 1355
HhaI GCGC 4 cut(s) 7, 75, 212, 537
Hin1I GRCGYC 1 cut(s) 210
Hin1II CATG 3 cut(s) 160, 499, 1369
Hin6I GCGC 4 cut(s) 5, 73, 210, 535
HinP1I GCGC 4 cut(s) 5, 73, 210, 535
HincII GTYRAC 2 cut(s) 238, 1032
HindII GTYRAC 2 cut(s) 238, 1032
HinfI GANTC 3 cut(s) 277, 814, 1219
HpaII CCGG 4 cut(s) 28, 46, 108, 1037
HphI GGTGA 2 cut(s) 184, 914
Hpy166II GTNNAC 4 cut(s) 238, 332, 601, 1032
Hpy188I TCNGA 7 cut(s) 90, 146, 489, 813, 849, 1334, 1600
Hpy188III TCNNGA 7 cut(s) 66, 172, 281, 338, 739, 1067, 1561
Hpy8I GTNNAC 4 cut(s) 238, 332, 601, 1032
Hpy99I CGWCG 2 cut(s) 122, 185
HpyAV CCTTC 6 cut(s) 22, 85, 586, 617, 1045, 1400
HpyCH4III ACNGT 4 cut(s) 196, 799, 1118, 1454
HpyCH4IV ACGT 2 cut(s) 364, 820
HpyF3I CTNAG 4 cut(s) 87, 390, 546, 654
HpySE526I ACGT 2 cut(s) 364, 820
Hsp92I GRCGYC 1 cut(s) 210
Hsp92II CATG 3 cut(s) 160, 499, 1369
HspAI GCGC 4 cut(s) 5, 73, 210, 535
KasI GGCGCC 1 cut(s) 209
KroI GCCGGC 1 cut(s) 27
KroNI GCCGGC 1 cut(s) 29
Ksp22I TGATCA 3 cut(s) 424, 612, 844
KspI CCGCGG 1 cut(s) 1153
Kzo9I GATC 5 cut(s) 424, 612, 844, 1093, 1536
LmnI GCTCC 7 cut(s) 49, 55, 174, 223, 340, 349, 542
Lsp1109I GCAGC 3 cut(s) 445, 1282, 1304
LweI GCATC 8 cut(s) 73, 156, 416, 712, 859, 921, 1189, 1345
MaeI CTAG 1 cut(s) 1017
MaeII ACGT 2 cut(s) 364, 820
MaeIII GTNAC 4 cut(s) 190, 196, 1135, 1157
MalI GATC 5 cut(s) 426, 614, 846, 1095, 1538
MbiI CCGCTC 1 cut(s) 352
MboI GATC 5 cut(s) 424, 612, 844, 1093, 1536
MboII GAAGA 4 cut(s) 457, 659, 731, 1017
MflI RGATCY 1 cut(s) 1536
MhlI GDGCHC 1 cut(s) 179
MlsI TGGCCA 1 cut(s) 326
MluNI TGGCCA 1 cut(s) 326
Mly113I GGCGCC 1 cut(s) 210
MlyI GAGTC 2 cut(s) 286, 808
MmeI TCCRAC 1 cut(s) 957
Mox20I TGGCCA 1 cut(s) 326
MroNI GCCGGC 1 cut(s) 27
MroXI GAANNNNTTC 1 cut(s) 807
MscI TGGCCA 1 cut(s) 326
MseI TTAA 3 cut(s) 1434, 1517, 1572
Msp20I TGGCCA 1 cut(s) 326
MspA1I CMGCKG 2 cut(s) 1152, 1295
MspI CCGG 4 cut(s) 28, 46, 108, 1037
MspR9I CCNGG 4 cut(s) 47, 412, 1216, 1311
Mva1269I GAATGC 1 cut(s) 1104
MvaI CCWGG 3 cut(s) 412, 1216, 1311
MvnI CGCG 4 cut(s) 67, 75, 274, 1152
NaeI GCCGGC 1 cut(s) 29
NarI GGCGCC 1 cut(s) 210
NciI CCSGG 1 cut(s) 47
NcoI CCATGG 1 cut(s) 1365
NdeII GATC 5 cut(s) 424, 612, 844, 1093, 1536
NgoMIV GCCGGC 1 cut(s) 27
NlaIII CATG 3 cut(s) 160, 499, 1369
NlaIV GGNNCC 3 cut(s) 148, 211, 1022
NmeAIII GCCGAG 1 cut(s) 1238
NmuCI GTSAC 2 cut(s) 190, 196
NruI TCGCGA 1 cut(s) 67
PctI GAATGC 1 cut(s) 1104
PdiI GCCGGC 1 cut(s) 29
PdmI GAANNNNTTC 1 cut(s) 807
PfeI GAWTC 1 cut(s) 1219
PfoI TCCNGGA 2 cut(s) 45, 410
PkrI GCNGC 6 cut(s) 77, 106, 354, 435, 1294, 1297
PleI GAGTC 2 cut(s) 285, 808
PluTI GGCGCC 1 cut(s) 213
PpsI GAGTC 2 cut(s) 285, 808
Ppu21I YACGTR 1 cut(s) 821
Psp6I CCWGG 3 cut(s) 410, 1214, 1309
PspEI GGTNACC 1 cut(s) 190
PspFI CCCAGC 1 cut(s) 1425
PspGI CCWGG 3 cut(s) 410, 1214, 1309
PspN4I GGNNCC 3 cut(s) 148, 211, 1022
PspPI GGNCC 1 cut(s) 146
PstI CTGCAG 1 cut(s) 1300
PsuI RGATCY 1 cut(s) 1536
PvuII CAGCTG 1 cut(s) 1295
RigI GGCCGGCC 1 cut(s) 31
RruI TCGCGA 1 cut(s) 67
RsaI GTAC 4 cut(s) 839, 1084, 1106, 1604
RsaNI GTAC 4 cut(s) 838, 1083, 1105, 1603
SacII CCGCGG 1 cut(s) 1153
SaqAI TTAA 3 cut(s) 1434, 1517, 1572
SatI GCNGC 6 cut(s) 76, 105, 353, 434, 1293, 1296
Sau3AI GATC 5 cut(s) 424, 612, 844, 1093, 1536
Sau96I GGNCC 1 cut(s) 146
ScaI AGTACT 2 cut(s) 839, 1604
SchI GAGTC 2 cut(s) 286, 808
ScrFI CCNGG 4 cut(s) 47, 412, 1216, 1311
SduI GDGCHC 1 cut(s) 179
SfaNI GCATC 8 cut(s) 73, 156, 416, 712, 859, 921, 1189, 1345
SfcI CTRYAG 2 cut(s) 996, 1296
SfoI GGCGCC 1 cut(s) 211
Sfr303I CCGCGG 1 cut(s) 1153
SgrBI CCGCGG 1 cut(s) 1153
SinI GGWCC 1 cut(s) 146
SsiI CCGC 8 cut(s) 75, 105, 133, 274, 347, 352, 1150, 1152
SspDI GGCGCC 1 cut(s) 209
SspI AATATT 1 cut(s) 472
SspMI CTAG 1 cut(s) 1017
StyD4I CCNGG 4 cut(s) 45, 410, 1214, 1309
StyI CCWWGG 3 cut(s) 882, 1016, 1365
TaaI ACNGT 4 cut(s) 196, 799, 1118, 1454
TaiI ACGT 2 cut(s) 367, 823
TaqI TCGA 4 cut(s) 15, 81, 443, 1096
TatI WGTACW 3 cut(s) 837, 1104, 1602
TauI GCSGC 3 cut(s) 78, 107, 355
TfiI GAWTC 1 cut(s) 1219
Tru1I TTAA 3 cut(s) 1434, 1517, 1572
Tru9I TTAA 3 cut(s) 1434, 1517, 1572
TscAI CASTG 4 cut(s) 804, 1121, 1422, 1457
TseFI GTSAC 2 cut(s) 190, 196
TseI GCWGC 3 cut(s) 433, 1292, 1295
Tsp45I GTSAC 2 cut(s) 190, 196
TspDTI ATGAA 5 cut(s) 25, 303, 362, 414, 927
TspRI CASTG 4 cut(s) 804, 1121, 1422, 1457
VpaK11BI GGWCC 1 cut(s) 146
XapI RAATTY 3 cut(s) 449, 455, 1123
XcmI CCANNNNNNNNNTGG 1 cut(s) 334
XmaJI CCTAGG 1 cut(s) 1016
XmnI GAANNNNTTC 1 cut(s) 807
XspI CTAG 1 cut(s) 1017
ZrmI AGTACT 2 cut(s) 839, 1604
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.