Rw4G027230
TCP Family

TCP-1/cpn60 chaperonin family

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_wichuraiana
Chr4
OG0015408
Physical Location & Seq
Reverse (-)
53650956 .. 53654127
3172 bp
Loading structure...
UTR
Exon/CDS
Intron
Rw4G027230.1

Sequence Viewer

Length: 1608 bp
ATGGCGCTGGCTTTCGATGAGTTCGGCCGGCCATTCATAATCCTGAGGGAGCAGGAGCAGAAGTCCCGACTGAGAGGCCTCGATGCTCAGAAGGCCAACATTGCCGCCGGCAAGGCCGTCGCCAAAATCCTCCGCACCTCGCTCGGACCCAAAGGCATGGACAAGATGCTCCAGAGCCCCGACGGCGAGGTCACCGTCACAAATGATGGCGCCACGATCTTGGAGCAGATGGATGTTGACAATCAAATTGCAAAGCTGATGGTTGAACTGTCGCAGAGTCAGGACTATGAAATTGGTGATGGGACAACTGGAGTTGTTGTGTTGGCTGGTTCACTTCTAGAGCAGGCTGAGCGGCTCTTGGAGCGCGGTATTCATCCCATTAGGGTTGCAGAGGGATATGAGATGGCATCCAGGATTGCTGTTGATCATTTGCAGCATATATCAAAGAAATTTGAATTTGGACTGGAAAATATTGAGCCTCTGGTTCAGACTTGCATGACTACTTTGTCATCAAAGATTGTCAATCGGTGCAAGCGTCCCCTTGCTGAGATTGCTGTCAGAGCAGTTCTTGCTGTTGCTGATTTAGAGAGGAAGGATGTGAACCTAGATTTGATTAAAGTAGAGGGGAAAGTAGGGGGCAAATTAGAGGATACTGAGCTGGTTTATGGTATTCTTATTGACAAGGATATGAGCCATCCACAAATGCCCAAGCGAATTGAAGATGCAAAAATTGCTATCTTGACTTGTCCCTTTGAGCCCCCGAAGCCAAAGACAAAGCATAAGGTCGATATTGATACAGTGGAAAAGTTTCAGACTCTGCGTGTGCAAGAACAGGAATACTTCGATCAGATGGTTCAAAAATGCAAGGATGCCGGTGCTACCTTGGTCATCTGCCAATGGGGGTTTGATGATGAAGCCAATCACCTATTGATGCACAGGAACTTGCCTGCTGTCAGATGGGTTGGTGGTGTTGAGTTGGAACTAATTGCAATAGCTACAGGGGGAAGAATTGTGCCTAGGTTCCAAGAGTTGACACCAGATAAGTTGGGGAAGGCTGGCTTGGTTCGTGAAAAATCATTTGGTACTACAAAAGATCGAATGCTGTACATTGAACACTGTGCAAATTCAAGGGCTGTAACCATATTTATCCGTGGAGGTAACAAAATGATGATAGAGGAGACCAAGCGCAGTATCCACGATGCTCTGTGTGTTGCTAGGAATCTTATTCGGAACAATTCTATTGTCTACGGTGGTGGCTCGGCAGAGATAGCTTGCTCGGTTGCTGTAGAGGCAGCTGCAGATAAACACCCAGGAGTTGAGCAATATGCTATCAGAGCATTTGCAGATGCTTTGGATGCTGTTCCTATGGCACTTGCAGAGAATAGTGGCCTTCAACCTATTGAAACACTAAATGCAGTGAAATCTCAGCAGATCCAGGAGAAAAATCCCCACTGTGGAATAGACTGCAATGATGTTGGCACTAATGATATGTGTGAGCAGAATGTCTTCGAGACTTTAATTGGAAAGCAGCAGCAAATCTTACTCGCCACACAAGTTGTCAAGATGATACTTAAAATAGATGATGTTATCTCCCCCTCCGAGTACTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
Cpn60_TCP1

Protein Analysis

535

Amino Acids

59.09

Weight (kDa)

5.56

Isoelectric Point (pI)

44.44

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Cpn60_TCP1 PF00118 40 - 531 1e-166 TCP-1/cpn60 chaperonin family
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0015408)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G24510 AT1G24510 AT1G24510
fragaria_vesca FvH4_5g28870
malus_domestica MD13G1106100.v1.1 MD16G1106300.v1.1
prunus_persica Prupe.1G240000_v2.0.a1
pyrus_communis pycom13g09210 pycom16g09050
rosa_chinensis RchiOBHm_Chr4g0432301
rosa_laevigata RLG00000006854
rosa_multiflora Rmu_sc0001084.1_g000043
rosa_roxburghii Rroxscaffold_5G00373760
rosa_rugosa Rorug04G0256900
rosa_samantha Rh4DG316300
rosa_wichuraiana Rw4G027230

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 2 cut(s) 188, 505
AccB1I GGYRCC 1 cut(s) 209
AccBSI CCGCTC 1 cut(s) 352
AccI GTMKAC 1 cut(s) 1245
AccII CGCG 1 cut(s) 366
AciI CCGC 4 cut(s) 105, 133, 352, 366
AclWI GGATC 1 cut(s) 1426
AcoI YGGCCR 2 cut(s) 25, 29
AcsI RAATTY 3 cut(s) 449, 455, 1123
AcyI GRCGYC 1 cut(s) 210
AfaI GTAC 3 cut(s) 1084, 1106, 1604
AfiI CCNNNNNNNGG 1 cut(s) 1454
AgsI TTSAA 8 cut(s) 266, 455, 719, 857, 1112, 1128, 1394, 1403
AjnI CCWGG 3 cut(s) 410, 1309, 1434
AjuI GAANNNNNNNTTGG 4 cut(s) 1043, 1062, 1075, 1094
AluBI AGCT 5 cut(s) 256, 658, 995, 1271, 1295
AluI AGCT 5 cut(s) 256, 658, 995, 1271, 1295
Alw26I GTCTC 2 cut(s) 1172, 1505
AlwI GGATC 1 cut(s) 1426
AlwNI CAGNNNCTG 1 cut(s) 817
AoxI GGCC 6 cut(s) 25, 29, 76, 93, 114, 1387
ApeKI GCWGC 5 cut(s) 433, 1292, 1295, 1528, 1531
ApoI RAATTY 3 cut(s) 449, 455, 1123
Asp700I GAANNNNTTC 2 cut(s) 807, 1505
AspA2I CCTAGG 1 cut(s) 1016
AspLEI GCGC 4 cut(s) 7, 212, 366, 1188
AspS9I GGNCC 1 cut(s) 146
AsuHPI GGTGA 3 cut(s) 184, 308, 914
AvaII GGWCC 1 cut(s) 146
AvrII CCTAGG 1 cut(s) 1016
AxyI CCTNAGG 1 cut(s) 44
BanI GGYRCC 1 cut(s) 209
BanII GRGCYC 2 cut(s) 179, 759
BbsI GAAGAC 1 cut(s) 1498
BbvI GCAGC 5 cut(s) 445, 1282, 1304, 1540, 1543
BccI CCATC 8 cut(s) 200, 223, 253, 293, 397, 702, 844, 951
BceAI ACGGC 2 cut(s) 101, 199
BcgI CGANNNNNNTGC 4 cut(s) 100, 124, 134, 158
BciT130I CCWGG 3 cut(s) 412, 1311, 1436
BciVI GTATCC 2 cut(s) 643, 1202
BclI TGATCA 1 cut(s) 424
BcoDI GTCTC 2 cut(s) 1172, 1505
BfaI CTAG 4 cut(s) 338, 605, 1017, 1215
BfmI CTRYAG 3 cut(s) 996, 1284, 1296
BfoI RGCGCY 2 cut(s) 8, 213
BfuI GTATCC 2 cut(s) 643, 1202
BglI GCCNNNNNGGC 2 cut(s) 113, 183
BisI GCNGC 7 cut(s) 105, 353, 434, 1293, 1296, 1529, 1532
BlnI CCTAGG 1 cut(s) 1016
BlpI GCTNAGC 1 cut(s) 348
BlsI GCNGC 7 cut(s) 106, 354, 435, 1294, 1297, 1530, 1533
BmcAI AGTACT 1 cut(s) 1604
Bme1390I CCNGG 3 cut(s) 412, 1311, 1436
Bme18I GGWCC 1 cut(s) 146
BmgT120I GGNCC 1 cut(s) 146
BmiI GGNNCC 3 cut(s) 148, 211, 1022
BmrFI CCNGG 3 cut(s) 412, 1311, 1436
BmsI GCATC 9 cut(s) 73, 156, 416, 712, 859, 921, 1189, 1336, 1345
BpiI GAAGAC 1 cut(s) 1498
BpmI CTGGAG 2 cut(s) 155, 330
Bpu1102I GCTNAGC 1 cut(s) 348
BsaHI GRCGYC 1 cut(s) 210
BsaI GGTCTC 1 cut(s) 1172
BsaJI CCNNGG 4 cut(s) 882, 1016, 1150, 1309
BsaXI ACNNNNNCTCC 4 cut(s) 47, 77, 303, 333
Bsc4I CCNNNNNNNGG 1 cut(s) 1454
Bse118I RCCGGY 3 cut(s) 27, 107, 872
Bse1I ACTGG 2 cut(s) 313, 468
Bse21I CCTNAGG 1 cut(s) 44
Bse3DI GCAATG 2 cut(s) 99, 1474
BseBI CCWGG 3 cut(s) 412, 1311, 1436
BseDI CCNNGG 4 cut(s) 882, 1016, 1150, 1309
BseGI GGATG 7 cut(s) 238, 373, 407, 601, 694, 874, 1360
BseLI CCNNNNNNNGG 1 cut(s) 1454
BseMI GCAATG 2 cut(s) 99, 1474
BseMII CTCAG 7 cut(s) 35, 62, 101, 339, 537, 645, 1439
BseNI ACTGG 2 cut(s) 313, 468
BseRI GAGGAG 1 cut(s) 1190
BseX3I CGGCCG 1 cut(s) 25
BseXI GCAGC 5 cut(s) 445, 1282, 1304, 1540, 1543
Bsh1236I CGCG 1 cut(s) 366
Bsh1285I CGRYCG 1 cut(s) 28
BshFI GGCC 6 cut(s) 27, 31, 78, 95, 116, 1389
BshNI GGYRCC 1 cut(s) 209
BsiEI CGRYCG 1 cut(s) 28
BsiSI CCGG 3 cut(s) 28, 108, 873
BslFI GGGAC 4 cut(s) 49, 316, 522, 732
BslI CCNNNNNNNGG 1 cut(s) 1454
BsmAI GTCTC 2 cut(s) 1172, 1505
BsmFI GGGAC 4 cut(s) 49, 316, 522, 732
BsmI GAATGC 1 cut(s) 1104
BsnI GGCC 6 cut(s) 27, 31, 78, 95, 116, 1389
Bso31I GGTCTC 1 cut(s) 1172
Bsp1286I GDGCHC 2 cut(s) 179, 759
Bsp1407I TGTACA 1 cut(s) 1104
Bsp143I GATC 5 cut(s) 216, 424, 844, 1093, 1431
Bsp1720I GCTNAGC 1 cut(s) 348
BspACI CCGC 4 cut(s) 105, 133, 352, 366
BspANI GGCC 6 cut(s) 27, 31, 78, 95, 116, 1389
BspCNI CTCAG 7 cut(s) 36, 63, 100, 340, 538, 646, 1438
BspFNI CGCG 1 cut(s) 366
BspLI GGNNCC 3 cut(s) 148, 211, 1022
BspMAI CTGCAG 1 cut(s) 1300
BspPI GGATC 1 cut(s) 1426
BspT107I GGYRCC 1 cut(s) 209
BspTNI GGTCTC 1 cut(s) 1172
BsrBI CCGCTC 1 cut(s) 352
BsrDI GCAATG 2 cut(s) 99, 1474
BsrFI RCCGGY 3 cut(s) 27, 107, 872
BsrGI TGTACA 1 cut(s) 1104
BsrI ACTGG 2 cut(s) 313, 468
BssAI RCCGGY 3 cut(s) 27, 107, 872
BssECI CCNNGG 4 cut(s) 882, 1016, 1150, 1309
BssMI GATC 5 cut(s) 216, 424, 844, 1093, 1431
BssNI GRCGYC 1 cut(s) 210
BssT1I CCWWGG 2 cut(s) 882, 1016
Bst2UI CCWGG 3 cut(s) 412, 1311, 1436
Bst4CI ACNGT 6 cut(s) 196, 270, 799, 1118, 1250, 1454
BstACI GRCGYC 1 cut(s) 210
BstAPI GCANNNNNTGC 2 cut(s) 569, 731
BstAUI TGTACA 1 cut(s) 1104
BstC8I GCNNGC 8 cut(s) 9, 29, 109, 345, 533, 948, 1057, 1273
BstDEI CTNAG 7 cut(s) 44, 71, 87, 348, 546, 654, 1425
BstDSI CCRYGG 1 cut(s) 1150
BstEII GGTNACC 1 cut(s) 190
BstF5I GGATG 7 cut(s) 238, 373, 407, 601, 694, 874, 1360
BstFNI CGCG 1 cut(s) 366
BstH2I RGCGCY 2 cut(s) 8, 213
BstHHI GCGC 4 cut(s) 7, 212, 366, 1188
BstKTI GATC 5 cut(s) 219, 427, 847, 1096, 1434
BstMAI GTCTC 2 cut(s) 1172, 1505
BstMBI GATC 5 cut(s) 216, 424, 844, 1093, 1431
BstMCI CGRYCG 1 cut(s) 28
BstNI CCWGG 3 cut(s) 412, 1311, 1436
BstPI GGTNACC 1 cut(s) 190
BstSCI CCNGG 3 cut(s) 410, 1309, 1434
BstSFI CTRYAG 3 cut(s) 996, 1284, 1296
BstUI CGCG 1 cut(s) 366
BstV1I GCAGC 5 cut(s) 445, 1282, 1304, 1540, 1543
BstV2I GAAGAC 1 cut(s) 1498
BstX2I RGATCY 1 cut(s) 1431
BstXI CCANNNNNNTGG 2 cut(s) 157, 220
BstYI RGATCY 1 cut(s) 1431
BstZI CGGCCG 1 cut(s) 25
Bsu36I CCTNAGG 1 cut(s) 44
BsuI GTATCC 2 cut(s) 643, 1202
BsuRI GGCC 6 cut(s) 27, 31, 78, 95, 116, 1389
BtgI CCRYGG 1 cut(s) 1150
BtsCI GGATG 7 cut(s) 238, 373, 407, 601, 694, 874, 1360
BtsI GCAGTG 1 cut(s) 1422
BtsIMutI CAGTG 4 cut(s) 804, 1114, 1422, 1450
Cac8I GCNNGC 8 cut(s) 9, 29, 109, 345, 533, 948, 1057, 1273
CaiI CAGNNNCTG 1 cut(s) 817
CfoI GCGC 4 cut(s) 7, 212, 366, 1188
Cfr10I RCCGGY 3 cut(s) 27, 107, 872
Cfr13I GGNCC 1 cut(s) 146
CseI GACGC 1 cut(s) 524
Csp6I GTAC 3 cut(s) 1083, 1105, 1603
CspCI CAANNNNNGTGG 2 cut(s) 1537, 1572
CviAII CATG 2 cut(s) 157, 496
CviQI GTAC 3 cut(s) 1083, 1105, 1603
DdeI CTNAG 7 cut(s) 44, 71, 87, 348, 546, 654, 1425
DinI GGCGCC 1 cut(s) 211
DpnI GATC 5 cut(s) 218, 426, 846, 1095, 1433
DpnII GATC 5 cut(s) 216, 424, 844, 1093, 1431
DrdI GACNNNNNNGTC 2 cut(s) 188, 505
DseDI GACNNNNNNGTC 2 cut(s) 188, 505
EaeI YGGCCR 2 cut(s) 25, 29
EagI CGGCCG 1 cut(s) 25
EclXI CGGCCG 1 cut(s) 25
Eco130I CCWWGG 2 cut(s) 882, 1016
Eco147I AGGCCT 1 cut(s) 78
Eco24I GRGCYC 2 cut(s) 179, 759
Eco31I GGTCTC 1 cut(s) 1172
Eco47I GGWCC 1 cut(s) 146
Eco52I CGGCCG 1 cut(s) 25
Eco81I CCTNAGG 1 cut(s) 44
Eco91I GGTNACC 1 cut(s) 190
EcoO65I GGTNACC 1 cut(s) 190
EcoRII CCWGG 3 cut(s) 410, 1309, 1434
EcoT14I CCWWGG 2 cut(s) 882, 1016
EcoT38I GRGCYC 2 cut(s) 179, 759
EgeI GGCGCC 1 cut(s) 211
EheI GGCGCC 1 cut(s) 211
ErhI CCWWGG 2 cut(s) 882, 1016
FaeI CATG 2 cut(s) 160, 499
FalI AAGNNNNNCTT 2 cut(s) 1043, 1075
FaqI GGGAC 4 cut(s) 49, 316, 522, 732
FatI CATG 2 cut(s) 156, 495
FbaI TGATCA 1 cut(s) 424
FblI GTMKAC 1 cut(s) 1245
Fnu4HI GCNGC 7 cut(s) 105, 353, 434, 1293, 1296, 1529, 1532
FokI GGATG 7 cut(s) 245, 360, 394, 608, 681, 881, 1367
FriOI GRGCYC 2 cut(s) 179, 759
FseI GGCCGGCC 1 cut(s) 31
Fsp4HI GCNGC 7 cut(s) 105, 353, 434, 1293, 1296, 1529, 1532
FspBI CTAG 4 cut(s) 338, 605, 1017, 1215
GlaI GCGC 4 cut(s) 6, 211, 365, 1187
GluI GCNGC 7 cut(s) 105, 353, 434, 1293, 1296, 1529, 1532
GsuI CTGGAG 2 cut(s) 155, 330
HaeII RGCGCY 2 cut(s) 8, 213
HaeIII GGCC 6 cut(s) 27, 31, 78, 95, 116, 1389
HapII CCGG 3 cut(s) 28, 108, 873
HgaI GACGC 1 cut(s) 524
HhaI GCGC 4 cut(s) 7, 212, 366, 1188
Hin1I GRCGYC 1 cut(s) 210
Hin1II CATG 2 cut(s) 160, 499
Hin6I GCGC 4 cut(s) 5, 210, 364, 1186
HinP1I GCGC 4 cut(s) 5, 210, 364, 1186
HincII GTYRAC 2 cut(s) 238, 1032
HindII GTYRAC 2 cut(s) 238, 1032
HinfI GANTC 3 cut(s) 277, 814, 1219
HpaII CCGG 3 cut(s) 28, 108, 873
HphI GGTGA 3 cut(s) 184, 308, 914
Hpy166II GTNNAC 5 cut(s) 238, 332, 601, 1032, 1246
Hpy188III TCNNGA 9 cut(s) 43, 66, 172, 281, 338, 739, 1067, 1510, 1561
Hpy8I GTNNAC 5 cut(s) 238, 332, 601, 1032, 1246
Hpy99I CGWCG 2 cut(s) 122, 185
HpyAV CCTTC 4 cut(s) 85, 586, 1045, 1400
HpyCH4III ACNGT 6 cut(s) 196, 270, 799, 1118, 1250, 1454
HpyF3I CTNAG 7 cut(s) 44, 71, 87, 348, 546, 654, 1425
Hsp92I GRCGYC 1 cut(s) 210
Hsp92II CATG 2 cut(s) 160, 499
HspAI GCGC 4 cut(s) 5, 210, 364, 1186
KasI GGCGCC 1 cut(s) 209
KroI GCCGGC 2 cut(s) 27, 107
KroNI GCCGGC 2 cut(s) 29, 109
Ksp22I TGATCA 1 cut(s) 424
Kzo9I GATC 5 cut(s) 216, 424, 844, 1093, 1431
LmnI GCTCC 5 cut(s) 49, 55, 174, 223, 361
Lsp1109I GCAGC 5 cut(s) 445, 1282, 1304, 1540, 1543
LweI GCATC 9 cut(s) 73, 156, 416, 712, 859, 921, 1189, 1336, 1345
MaeI CTAG 4 cut(s) 338, 605, 1017, 1215
MaeIII GTNAC 4 cut(s) 190, 196, 1135, 1157
MalI GATC 5 cut(s) 218, 426, 846, 1095, 1433
MbiI CCGCTC 1 cut(s) 352
MboI GATC 5 cut(s) 216, 424, 844, 1093, 1431
MboII GAAGA 3 cut(s) 731, 1017, 1498
MflI RGATCY 1 cut(s) 1431
MhlI GDGCHC 2 cut(s) 179, 759
Mly113I GGCGCC 1 cut(s) 210
MlyI GAGTC 2 cut(s) 286, 808
MmeI TCCRAC 1 cut(s) 957
MroNI GCCGGC 2 cut(s) 27, 107
MroXI GAANNNNTTC 2 cut(s) 807, 1505
MseI TTAA 3 cut(s) 615, 1517, 1572
MspA1I CMGCKG 1 cut(s) 1295
MspI CCGG 3 cut(s) 28, 108, 873
MspR9I CCNGG 3 cut(s) 412, 1311, 1436
Mva1269I GAATGC 1 cut(s) 1104
MvaI CCWGG 3 cut(s) 412, 1311, 1436
MvnI CGCG 1 cut(s) 366
NaeI GCCGGC 2 cut(s) 29, 109
NarI GGCGCC 1 cut(s) 210
NdeII GATC 5 cut(s) 216, 424, 844, 1093, 1431
NgoMIV GCCGGC 2 cut(s) 27, 107
NlaIII CATG 2 cut(s) 160, 499
NlaIV GGNNCC 3 cut(s) 148, 211, 1022
NmeAIII GCCGAG 1 cut(s) 1238
NmuCI GTSAC 2 cut(s) 190, 196
PceI AGGCCT 1 cut(s) 78
PcsI WCGNNNNNNNCGW 1 cut(s) 532
PctI GAATGC 1 cut(s) 1104
PdiI GCCGGC 2 cut(s) 29, 109
PdmI GAANNNNTTC 2 cut(s) 807, 1505
PfeI GAWTC 1 cut(s) 1219
PfoI TCCNGGA 2 cut(s) 410, 1434
PkrI GCNGC 7 cut(s) 106, 354, 435, 1294, 1297, 1530, 1533
PleI GAGTC 2 cut(s) 285, 808
PluTI GGCGCC 1 cut(s) 213
PpsI GAGTC 2 cut(s) 285, 808
Psp6I CCWGG 3 cut(s) 410, 1309, 1434
PspEI GGTNACC 1 cut(s) 190
PspGI CCWGG 3 cut(s) 410, 1309, 1434
PspN4I GGNNCC 3 cut(s) 148, 211, 1022
PspPI GGNCC 1 cut(s) 146
PstI CTGCAG 1 cut(s) 1300
PstNI CAGNNNCTG 1 cut(s) 817
PsuI RGATCY 1 cut(s) 1431
PvuII CAGCTG 1 cut(s) 1295
RigI GGCCGGCC 1 cut(s) 31
RsaI GTAC 3 cut(s) 1084, 1106, 1604
RsaNI GTAC 3 cut(s) 1083, 1105, 1603
SaqAI TTAA 3 cut(s) 615, 1517, 1572
SatI GCNGC 7 cut(s) 105, 353, 434, 1293, 1296, 1529, 1532
Sau3AI GATC 5 cut(s) 216, 424, 844, 1093, 1431
Sau96I GGNCC 1 cut(s) 146
ScaI AGTACT 1 cut(s) 1604
SchI GAGTC 2 cut(s) 286, 808
ScrFI CCNGG 3 cut(s) 412, 1311, 1436
SduI GDGCHC 2 cut(s) 179, 759
SfaNI GCATC 9 cut(s) 73, 156, 416, 712, 859, 921, 1189, 1336, 1345
SfcI CTRYAG 3 cut(s) 996, 1284, 1296
SfoI GGCGCC 1 cut(s) 211
SinI GGWCC 1 cut(s) 146
SseBI AGGCCT 1 cut(s) 78
SsiI CCGC 4 cut(s) 105, 133, 352, 366
SspDI GGCGCC 1 cut(s) 209
SspI AATATT 1 cut(s) 472
SspMI CTAG 4 cut(s) 338, 605, 1017, 1215
StuI AGGCCT 1 cut(s) 78
StyD4I CCNGG 3 cut(s) 410, 1309, 1434
StyI CCWWGG 2 cut(s) 882, 1016
TaaI ACNGT 6 cut(s) 196, 270, 799, 1118, 1250, 1454
TaqI TCGA 6 cut(s) 15, 81, 786, 843, 1096, 1509
TatI WGTACW 2 cut(s) 1104, 1602
TauI GCSGC 2 cut(s) 107, 355
TfiI GAWTC 1 cut(s) 1219
Tru1I TTAA 3 cut(s) 615, 1517, 1572
Tru9I TTAA 3 cut(s) 615, 1517, 1572
TscAI CASTG 4 cut(s) 804, 1121, 1422, 1457
TseFI GTSAC 2 cut(s) 190, 196
TseI GCWGC 5 cut(s) 433, 1292, 1295, 1528, 1531
Tsp45I GTSAC 2 cut(s) 190, 196
TspDTI ATGAA 4 cut(s) 25, 303, 362, 927
TspGWI ACGGA 1 cut(s) 1139
TspRI CASTG 4 cut(s) 804, 1121, 1422, 1457
VpaK11BI GGWCC 1 cut(s) 146
XapI RAATTY 3 cut(s) 449, 455, 1123
XbaI TCTAGA 1 cut(s) 337
XmaJI CCTAGG 1 cut(s) 1016
XmiI GTMKAC 1 cut(s) 1245
XmnI GAANNNNTTC 2 cut(s) 807, 1505
XspI CTAG 4 cut(s) 338, 605, 1017, 1215
ZrmI AGTACT 1 cut(s) 1604
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.