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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT1G24560 |
| fragaria_vesca | FvH4_4g25380 FvH4_4g25380 FvH4_4g25380 FvH4_4g25380 |
| malus_domestica | MD13G1104300.v1.1 MD16G1104400.v1.1 |
| prunus_persica | Prupe.1G242200_v2.0.a1 Prupe.1G242200_v2.0.a1 |
| pyrus_communis | pycom13g09050 pycom16g08870 |
| rosa_chinensis | RchiOBHm_Chr4g0432671 |
| rosa_laevigata | RLG00000006824 |
| rosa_multiflora | Rmu_sc0009481.1_g000004 |
| rosa_roxburghii | Rroxscaffold_5G00374130 |
| rosa_rugosa | Rorug04G0261400 Rorug04G0261500 |
| rosa_samantha | Rh4AG316000 Rh4BG324000 Rh4CG339000 Rh4DG319400 |
| rosa_wichuraiana | Rw4G027490 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AasI | GACNNNNNNGTC | 1 cut(s) | 577 |
| Acc36I | ACCTGC | 1 cut(s) | 1028 |
| AccII | CGCG | 2 cut(s) | 85, 237 |
| AciI | CCGC | 5 cut(s) | 83, 85, 125, 158, 683 |
| AclI | AACGTT | 1 cut(s) | 1569 |
| AclWI | GGATC | 3 cut(s) | 894, 904, 917 |
| AcoI | YGGCCR | 2 cut(s) | 1380, 1937 |
| AcsI | RAATTY | 4 cut(s) | 388, 451, 1123, 1286 |
| AcuI | CTGAAG | 4 cut(s) | 167, 875, 1139, 1623 |
| AfaI | GTAC | 3 cut(s) | 529, 1174, 1276 |
| AfeI | AGCGCT | 1 cut(s) | 1189 |
| AhdI | GACNNNNNGTC | 1 cut(s) | 1678 |
| AhlI | ACTAGT | 1 cut(s) | 1466 |
| AjiI | CACGTC | 1 cut(s) | 1680 |
| AjnI | CCWGG | 1 cut(s) | 1377 |
| Alw26I | GTCTC | 5 cut(s) | 483, 995, 1457, 1760, 1810 |
| AlwI | GGATC | 3 cut(s) | 894, 904, 917 |
| AlwNI | CAGNNNCTG | 1 cut(s) | 62 |
| Ama87I | CYCGRG | 3 cut(s) | 150, 1418, 1952 |
| Aor51HI | AGCGCT | 1 cut(s) | 1189 |
| AoxI | GGCC | 2 cut(s) | 1380, 1937 |
| ApoI | RAATTY | 4 cut(s) | 388, 451, 1123, 1286 |
| Asp700I | GAANNNNTTC | 1 cut(s) | 1239 |
| AspLEI | GCGC | 4 cut(s) | 61, 237, 1190, 1524 |
| AspS9I | GGNCC | 1 cut(s) | 607 |
| AsuHPI | GGTGA | 2 cut(s) | 803, 1216 |
| AsuII | TTCGAA | 2 cut(s) | 170, 1056 |
| AvaI | CYCGRG | 3 cut(s) | 150, 1418, 1952 |
| AvaII | GGWCC | 1 cut(s) | 607 |
| BalI | TGGCCA | 2 cut(s) | 1382, 1939 |
| BamHI | GGATCC | 1 cut(s) | 909 |
| BbsI | GAAGAC | 3 cut(s) | 461, 848, 1365 |
| BbvCI | CCTCAGC | 1 cut(s) | 32 |
| BceAI | ACGGC | 1 cut(s) | 1785 |
| BcgI | CGANNNNNNTGC | 2 cut(s) | 5, 39 |
| BciT130I | CCWGG | 1 cut(s) | 1379 |
| BcoDI | GTCTC | 5 cut(s) | 483, 995, 1457, 1760, 1810 |
| BcuI | ACTAGT | 1 cut(s) | 1466 |
| BfaI | CTAG | 4 cut(s) | 360, 594, 1467, 1923 |
| BfmI | CTRYAG | 4 cut(s) | 216, 504, 1248, 1433 |
| BfoI | RGCGCY | 2 cut(s) | 62, 1191 |
| BfuAI | ACCTGC | 1 cut(s) | 1028 |
| BglII | AGATCT | 2 cut(s) | 356, 1808 |
| Bme1390I | CCNGG | 1 cut(s) | 1379 |
| Bme18I | GGWCC | 1 cut(s) | 607 |
| BmeRI | GACNNNNNGTC | 1 cut(s) | 1678 |
| BmeT110I | CYCGRG | 3 cut(s) | 150, 1418, 1952 |
| BmgBI | CACGTC | 1 cut(s) | 1680 |
| BmgT120I | GGNCC | 1 cut(s) | 607 |
| BmiI | GGNNCC | 2 cut(s) | 13, 911 |
| BmrFI | CCNGG | 1 cut(s) | 1379 |
| BmsI | GCATC | 5 cut(s) | 13, 104, 1418, 1460, 1786 |
| BpiI | GAAGAC | 3 cut(s) | 461, 848, 1365 |
| BplI | GAGNNNNNCTC | 2 cut(s) | 377, 409 |
| Bpu10I | CCTNAGC | 1 cut(s) | 32 |
| Bpu14I | TTCGAA | 2 cut(s) | 170, 1056 |
| BpuEI | CTTGAG | 3 cut(s) | 320, 773, 981 |
| BsaJI | CCNNGG | 3 cut(s) | 83, 1377, 1940 |
| Bse3DI | GCAATG | 2 cut(s) | 1590, 1788 |
| BseBI | CCWGG | 1 cut(s) | 1379 |
| BseDI | CCNNGG | 3 cut(s) | 83, 1377, 1940 |
| BseGI | GGATG | 6 cut(s) | 28, 106, 328, 1273, 1312, 1801 |
| BseMI | GCAATG | 2 cut(s) | 1590, 1788 |
| BseMII | CTCAG | 9 cut(s) | 46, 153, 494, 656, 969, 1172, 1427, 1508, 1805 |
| BseRI | GAGGAG | 2 cut(s) | 1028, 1198 |
| Bsh1236I | CGCG | 2 cut(s) | 85, 237 |
| BshFI | GGCC | 2 cut(s) | 1382, 1939 |
| BsiHKCI | CYCGRG | 3 cut(s) | 150, 1418, 1952 |
| BslFI | GGGAC | 1 cut(s) | 2004 |
| BsmAI | GTCTC | 5 cut(s) | 483, 995, 1457, 1760, 1810 |
| BsmBI | CGTCTC | 1 cut(s) | 1760 |
| BsmFI | GGGAC | 1 cut(s) | 2004 |
| BsmI | GAATGC | 1 cut(s) | 1524 |
| BsnI | GGCC | 2 cut(s) | 1382, 1939 |
| BsoBI | CYCGRG | 3 cut(s) | 150, 1418, 1952 |
| Bsp119I | TTCGAA | 2 cut(s) | 170, 1056 |
| Bsp143I | GATC | 7 cut(s) | 133, 356, 657, 886, 909, 1422, 1808 |
| Bsp19I | CCATGG | 1 cut(s) | 1940 |
| BspACI | CCGC | 5 cut(s) | 83, 85, 125, 158, 683 |
| BspANI | GGCC | 2 cut(s) | 1382, 1939 |
| BspCNI | CTCAG | 9 cut(s) | 45, 154, 493, 655, 970, 1173, 1426, 1507, 1806 |
| BspFNI | CGCG | 2 cut(s) | 85, 237 |
| BspHI | TCATGA | 1 cut(s) | 1342 |
| BspLI | GGNNCC | 2 cut(s) | 13, 911 |
| BspMAI | CTGCAG | 2 cut(s) | 1252, 1437 |
| BspMI | ACCTGC | 1 cut(s) | 1028 |
| BspPI | GGATC | 3 cut(s) | 894, 904, 917 |
| BspQI | GCTCTTC | 2 cut(s) | 540, 1100 |
| BspT104I | TTCGAA | 2 cut(s) | 170, 1056 |
| BsrDI | GCAATG | 2 cut(s) | 1590, 1788 |
| BssECI | CCNNGG | 3 cut(s) | 83, 1377, 1940 |
| BssMI | GATC | 7 cut(s) | 133, 356, 657, 886, 909, 1422, 1808 |
| BssT1I | CCWWGG | 1 cut(s) | 1940 |
| Bst2UI | CCWGG | 1 cut(s) | 1379 |
| Bst4CI | ACNGT | 4 cut(s) | 813, 966, 1138, 1871 |
| Bst6I | CTCTTC | 7 cut(s) | 540, 731, 1095, 1100, 1455, 1707, 1758 |
| BstAPI | GCANNNNNTGC | 2 cut(s) | 1787, 1796 |
| BstBI | TTCGAA | 2 cut(s) | 170, 1056 |
| BstC8I | GCNNGC | 2 cut(s) | 1384, 1725 |
| BstDSI | CCRYGG | 2 cut(s) | 83, 1940 |
| BstF5I | GGATG | 6 cut(s) | 28, 106, 328, 1273, 1312, 1801 |
| BstFNI | CGCG | 2 cut(s) | 85, 237 |
| BstH2I | RGCGCY | 2 cut(s) | 62, 1191 |
| BstHHI | GCGC | 4 cut(s) | 61, 237, 1190, 1524 |
| BstKTI | GATC | 7 cut(s) | 136, 359, 660, 889, 912, 1425, 1811 |
| BstMAI | GTCTC | 5 cut(s) | 483, 995, 1457, 1760, 1810 |
| BstMBI | GATC | 7 cut(s) | 133, 356, 657, 886, 909, 1422, 1808 |
| BstNI | CCWGG | 1 cut(s) | 1379 |
| BstSCI | CCNGG | 1 cut(s) | 1377 |
| BstSFI | CTRYAG | 4 cut(s) | 216, 504, 1248, 1433 |
| BstUI | CGCG | 2 cut(s) | 85, 237 |
| BstV2I | GAAGAC | 3 cut(s) | 461, 848, 1365 |
| BstX2I | RGATCY | 3 cut(s) | 356, 909, 1808 |
| BstXI | CCANNNNNNTGG | 1 cut(s) | 1390 |
| BstYI | RGATCY | 3 cut(s) | 356, 909, 1808 |
| BsuRI | GGCC | 2 cut(s) | 1382, 1939 |
| BtgI | CCRYGG | 2 cut(s) | 83, 1940 |
| BtgZI | GCGATG | 1 cut(s) | 51 |
| BtrI | CACGTC | 1 cut(s) | 1680 |
| BtsCI | GGATG | 6 cut(s) | 28, 106, 328, 1273, 1312, 1801 |
| BveI | ACCTGC | 1 cut(s) | 1028 |
| Cac8I | GCNNGC | 2 cut(s) | 1384, 1725 |
| CaiI | CAGNNNCTG | 1 cut(s) | 62 |
| CciI | TCATGA | 1 cut(s) | 1342 |
| CfoI | GCGC | 4 cut(s) | 61, 237, 1190, 1524 |
| Cfr13I | GGNCC | 1 cut(s) | 607 |
| Cfr42I | CCGCGG | 1 cut(s) | 86 |
| Csp6I | GTAC | 3 cut(s) | 528, 1173, 1275 |
| CviAII | CATG | 4 cut(s) | 914, 1112, 1343, 1941 |
| CviQI | GTAC | 3 cut(s) | 528, 1173, 1275 |
| DpnI | GATC | 7 cut(s) | 135, 358, 659, 888, 911, 1424, 1810 |
| DpnII | GATC | 7 cut(s) | 133, 356, 657, 886, 909, 1422, 1808 |
| DraI | TTTAAA | 2 cut(s) | 72, 372 |
| DrdI | GACNNNNNNGTC | 1 cut(s) | 577 |
| DriI | GACNNNNNGTC | 1 cut(s) | 1678 |
| DseDI | GACNNNNNNGTC | 1 cut(s) | 577 |
| EaeI | YGGCCR | 2 cut(s) | 1380, 1937 |
| Eam1104I | CTCTTC | 7 cut(s) | 540, 731, 1095, 1100, 1455, 1707, 1758 |
| Eam1105I | GACNNNNNGTC | 1 cut(s) | 1678 |
| EarI | CTCTTC | 7 cut(s) | 540, 731, 1095, 1100, 1455, 1707, 1758 |
| Eco130I | CCWWGG | 1 cut(s) | 1940 |
| Eco32I | GATATC | 1 cut(s) | 426 |
| Eco47I | GGWCC | 1 cut(s) | 607 |
| Eco47III | AGCGCT | 1 cut(s) | 1189 |
| Eco57I | CTGAAG | 4 cut(s) | 167, 875, 1139, 1623 |
| Eco88I | CYCGRG | 3 cut(s) | 150, 1418, 1952 |
| EcoRI | GAATTC | 1 cut(s) | 388 |
| EcoRII | CCWGG | 1 cut(s) | 1377 |
| EcoRV | GATATC | 1 cut(s) | 426 |
| EcoT14I | CCWWGG | 1 cut(s) | 1940 |
| ErhI | CCWWGG | 1 cut(s) | 1940 |
| Esp3I | CGTCTC | 1 cut(s) | 1760 |
| FaeI | CATG | 4 cut(s) | 917, 1115, 1346, 1944 |
| FalI | AAGNNNNNCTT | 2 cut(s) | 1692, 1724 |
| FaqI | GGGAC | 1 cut(s) | 2004 |
| FatI | CATG | 4 cut(s) | 913, 1111, 1342, 1940 |
| FauI | CCCGC | 1 cut(s) | 78 |
| FauNDI | CATATG | 1 cut(s) | 399 |
| FokI | GGATG | 6 cut(s) | 35, 113, 335, 1280, 1319, 1808 |
| FspBI | CTAG | 4 cut(s) | 360, 594, 1467, 1923 |
| GlaI | GCGC | 4 cut(s) | 60, 236, 1189, 1523 |
| HaeII | RGCGCY | 2 cut(s) | 62, 1191 |
| HaeIII | GGCC | 2 cut(s) | 1382, 1939 |
| HhaI | GCGC | 4 cut(s) | 61, 237, 1190, 1524 |
| Hin1II | CATG | 4 cut(s) | 917, 1115, 1346, 1944 |
| Hin6I | GCGC | 4 cut(s) | 59, 235, 1188, 1522 |
| HinP1I | GCGC | 4 cut(s) | 59, 235, 1188, 1522 |
| HincII | GTYRAC | 1 cut(s) | 946 |
| HindII | GTYRAC | 1 cut(s) | 946 |
| HphI | GGTGA | 2 cut(s) | 803, 1216 |
| Hpy166II | GTNNAC | 1 cut(s) | 946 |
| Hpy8I | GTNNAC | 1 cut(s) | 946 |
| Hpy99I | CGWCG | 2 cut(s) | 242, 1430 |
| HpyAV | CCTTC | 6 cut(s) | 265, 271, 766, 782, 1306, 1568 |
| HpyCH4III | ACNGT | 4 cut(s) | 813, 966, 1138, 1871 |
| HpyCH4IV | ACGT | 4 cut(s) | 256, 871, 1569, 1679 |
| HpyCH4V | TGCA | 5 cut(s) | 575, 1250, 1435, 1790, 1799 |
| HpySE526I | ACGT | 4 cut(s) | 256, 871, 1569, 1679 |
| Hsp92II | CATG | 4 cut(s) | 917, 1115, 1346, 1944 |
| HspAI | GCGC | 4 cut(s) | 59, 235, 1188, 1522 |
| KspI | CCGCGG | 1 cut(s) | 86 |
| Kzo9I | GATC | 7 cut(s) | 133, 356, 657, 886, 909, 1422, 1808 |
| LguI | GCTCTTC | 2 cut(s) | 540, 1100 |
| LmnI | GCTCC | 9 cut(s) | 11, 115, 127, 178, 598, 802, 1185, 1504, 1658 |
| LweI | GCATC | 5 cut(s) | 13, 104, 1418, 1460, 1786 |
| MaeI | CTAG | 4 cut(s) | 360, 594, 1467, 1923 |
| MaeII | ACGT | 4 cut(s) | 256, 871, 1569, 1679 |
| MaeIII | GTNAC | 1 cut(s) | 1680 |
| MalI | GATC | 7 cut(s) | 135, 358, 659, 888, 911, 1424, 1810 |
| MboI | GATC | 7 cut(s) | 133, 356, 657, 886, 909, 1422, 1808 |
| MfeI | CAATTG | 1 cut(s) | 1484 |
| MflI | RGATCY | 3 cut(s) | 356, 909, 1808 |
| MlsI | TGGCCA | 2 cut(s) | 1382, 1939 |
| MluNI | TGGCCA | 2 cut(s) | 1382, 1939 |
| MlyI | GAGTC | 6 cut(s) | 53, 251, 989, 1316, 1812, 1994 |
| MmeI | TCCRAC | 2 cut(s) | 627, 1425 |
| Mox20I | TGGCCA | 2 cut(s) | 1382, 1939 |
| MroXI | GAANNNNTTC | 1 cut(s) | 1239 |
| MscI | TGGCCA | 2 cut(s) | 1382, 1939 |
| Msp20I | TGGCCA | 2 cut(s) | 1382, 1939 |
| MspA1I | CMGCKG | 2 cut(s) | 85, 1687 |
| MspR9I | CCNGG | 1 cut(s) | 1379 |
| MunI | CAATTG | 1 cut(s) | 1484 |
| Mva1269I | GAATGC | 1 cut(s) | 1524 |
| MvaI | CCWGG | 1 cut(s) | 1379 |
| MvnI | CGCG | 2 cut(s) | 85, 237 |
| NcoI | CCATGG | 1 cut(s) | 1940 |
| NdeI | CATATG | 1 cut(s) | 399 |
| NdeII | GATC | 7 cut(s) | 133, 356, 657, 886, 909, 1422, 1808 |
| NlaIII | CATG | 4 cut(s) | 917, 1115, 1346, 1944 |
| NlaIV | GGNNCC | 2 cut(s) | 13, 911 |
| NmeAIII | GCCGAG | 1 cut(s) | 1660 |
| NmuCI | GTSAC | 1 cut(s) | 1680 |
| NspV | TTCGAA | 2 cut(s) | 170, 1056 |
| PaeR7I | CTCGAG | 2 cut(s) | 150, 1418 |
| PagI | TCATGA | 1 cut(s) | 1342 |
| PciSI | GCTCTTC | 2 cut(s) | 540, 1100 |
| PcsI | WCGNNNNNNNCGW | 1 cut(s) | 1425 |
| PctI | GAATGC | 1 cut(s) | 1524 |
| PdmI | GAANNNNTTC | 1 cut(s) | 1239 |
| PfeI | GAWTC | 7 cut(s) | 77, 283, 650, 1046, 1280, 1736, 1854 |
| PleI | GAGTC | 6 cut(s) | 52, 250, 988, 1316, 1812, 1993 |
| PpsI | GAGTC | 6 cut(s) | 52, 250, 988, 1316, 1812, 1993 |
| Psp1406I | AACGTT | 1 cut(s) | 1569 |
| Psp6I | CCWGG | 1 cut(s) | 1377 |
| PspGI | CCWGG | 1 cut(s) | 1377 |
| PspN4I | GGNNCC | 2 cut(s) | 13, 911 |
| PspPI | GGNCC | 1 cut(s) | 607 |
| PstI | CTGCAG | 2 cut(s) | 1252, 1437 |
| PstNI | CAGNNNCTG | 1 cut(s) | 62 |
| PsuI | RGATCY | 3 cut(s) | 356, 909, 1808 |
| PvuII | CAGCTG | 1 cut(s) | 1687 |
| RsaI | GTAC | 3 cut(s) | 529, 1174, 1276 |
| RsaNI | GTAC | 3 cut(s) | 528, 1173, 1275 |
| SacII | CCGCGG | 1 cut(s) | 86 |
| SapI | GCTCTTC | 2 cut(s) | 540, 1100 |
| Sau3AI | GATC | 7 cut(s) | 133, 356, 657, 886, 909, 1422, 1808 |
| Sau96I | GGNCC | 1 cut(s) | 607 |
| SchI | GAGTC | 6 cut(s) | 53, 251, 989, 1316, 1812, 1994 |
| ScrFI | CCNGG | 1 cut(s) | 1379 |
| SfaNI | GCATC | 5 cut(s) | 13, 104, 1418, 1460, 1786 |
| SfcI | CTRYAG | 4 cut(s) | 216, 504, 1248, 1433 |
| Sfr274I | CTCGAG | 2 cut(s) | 150, 1418 |
| Sfr303I | CCGCGG | 1 cut(s) | 86 |
| SfuI | TTCGAA | 2 cut(s) | 170, 1056 |
| SgrBI | CCGCGG | 1 cut(s) | 86 |
| SinI | GGWCC | 1 cut(s) | 607 |
| SlaI | CTCGAG | 2 cut(s) | 150, 1418 |
| SmlI | CTYRAG | 5 cut(s) | 150, 299, 752, 996, 1418 |
| SmoI | CTYRAG | 5 cut(s) | 150, 299, 752, 996, 1418 |
| SpeI | ACTAGT | 1 cut(s) | 1466 |
| SsiI | CCGC | 5 cut(s) | 83, 85, 125, 158, 683 |
| SspI | AATATT | 1 cut(s) | 1399 |
| SspMI | CTAG | 4 cut(s) | 360, 594, 1467, 1923 |
| StyD4I | CCNGG | 1 cut(s) | 1377 |
| StyI | CCWWGG | 1 cut(s) | 1940 |
| TaaI | ACNGT | 4 cut(s) | 813, 966, 1138, 1871 |
| TaiI | ACGT | 4 cut(s) | 259, 874, 1572, 1682 |
| TauI | GCSGC | 2 cut(s) | 85, 161 |
| TfiI | GAWTC | 7 cut(s) | 77, 283, 650, 1046, 1280, 1736, 1854 |
| TseFI | GTSAC | 1 cut(s) | 1680 |
| Tsp45I | GTSAC | 1 cut(s) | 1680 |
| TspDTI | ATGAA | 8 cut(s) | 66, 276, 549, 603, 1128, 1146, 1380, 1919 |
| TspGWI | ACGGA | 3 cut(s) | 24, 128, 628 |
| VpaK11BI | GGWCC | 1 cut(s) | 607 |
| XapI | RAATTY | 4 cut(s) | 388, 451, 1123, 1286 |
| XbaI | TCTAGA | 1 cut(s) | 359 |
| XhoI | CTCGAG | 2 cut(s) | 150, 1418 |
| XmnI | GAANNNNTTC | 1 cut(s) | 1239 |
| XspI | CTAG | 4 cut(s) | 360, 594, 1467, 1923 |