Belongs to the multi antimicrobial extrusion (MATE) (TC 2.A.66.1) family
Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.
| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT1G47530 AT1G47530 |
| fragaria_vesca | FvH4_2g40430 |
| malus_domestica | MD00G1039400.v1.1 MD08G1037600.v1.1 |
| prunus_persica | Prupe.1G384800_v2.0.a1 |
| pyrus_communis | pycom08g02990 |
| rosa_chinensis | RchiOBHm_Chr6g0300301 |
| rosa_laevigata | RLG00000011349 |
| rosa_multiflora | Rmu_sc0001670.1_g000023 |
| rosa_roxburghii | Rroxscaffold_7G00167910 |
| rosa_rugosa | Rorug06G0294800 |
| rosa_samantha | Rh6CG422300 |
| rosa_wichuraiana | Rw6G035630 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| Acc36I | ACCTGC | 1 cut(s) | 1279 |
| AccBSI | CCGCTC | 1 cut(s) | 1211 |
| AccI | GTMKAC | 1 cut(s) | 402 |
| AccII | CGCG | 2 cut(s) | 320, 464 |
| AciI | CCGC | 9 cut(s) | 112, 219, 320, 462, 464, 491, 1202, 1211, 1412 |
| AclI | AACGTT | 1 cut(s) | 355 |
| AclWI | GGATC | 2 cut(s) | 481, 578 |
| AcoI | YGGCCR | 1 cut(s) | 193 |
| AcsI | RAATTY | 2 cut(s) | 530, 1004 |
| AcyI | GRCGYC | 1 cut(s) | 71 |
| AfaI | GTAC | 1 cut(s) | 827 |
| AfiI | CCNNNNNNNGG | 1 cut(s) | 675 |
| AgeI | ACCGGT | 1 cut(s) | 851 |
| AgsI | TTSAA | 4 cut(s) | 233, 1035, 1107, 1171 |
| AluBI | AGCT | 8 cut(s) | 214, 609, 653, 697, 976, 1086, 1115, 1337 |
| AluI | AGCT | 8 cut(s) | 214, 609, 653, 697, 976, 1086, 1115, 1337 |
| Alw21I | GWGCWC | 2 cut(s) | 175, 216 |
| Alw26I | GTCTC | 5 cut(s) | 203, 229, 287, 860, 1027 |
| AlwI | GGATC | 2 cut(s) | 481, 578 |
| AlwNI | CAGNNNCTG | 1 cut(s) | 1225 |
| AoxI | GGCC | 2 cut(s) | 84, 193 |
| ApeKI | GCWGC | 5 cut(s) | 509, 650, 947, 992, 1121 |
| ApoI | RAATTY | 2 cut(s) | 530, 1004 |
| AsiGI | ACCGGT | 1 cut(s) | 851 |
| AspLEI | GCGC | 2 cut(s) | 320, 1447 |
| AspS9I | GGNCC | 3 cut(s) | 84, 131, 763 |
| AsuHPI | GGTGA | 3 cut(s) | 46, 215, 706 |
| AsuNHI | GCTAGC | 1 cut(s) | 751 |
| AvaII | GGWCC | 2 cut(s) | 131, 763 |
| BanII | GRGCYC | 2 cut(s) | 216, 415 |
| BauI | CACGAG | 3 cut(s) | 36, 670, 1132 |
| Bbv12I | GWGCWC | 2 cut(s) | 175, 216 |
| BbvI | GCAGC | 5 cut(s) | 521, 662, 934, 1004, 1133 |
| BccI | CCATC | 6 cut(s) | 271, 331, 556, 826, 896, 1425 |
| BceAI | ACGGC | 4 cut(s) | 7, 180, 206, 1127 |
| BcoDI | GTCTC | 5 cut(s) | 203, 229, 287, 860, 1027 |
| BfaI | CTAG | 2 cut(s) | 752, 1298 |
| BfuAI | ACCTGC | 1 cut(s) | 1279 |
| BisI | GCNGC | 8 cut(s) | 113, 219, 462, 510, 651, 948, 993, 1122 |
| BlpI | GCTNAGC | 1 cut(s) | 1404 |
| BlsI | GCNGC | 8 cut(s) | 114, 220, 463, 511, 652, 949, 994, 1123 |
| Bme18I | GGWCC | 2 cut(s) | 131, 763 |
| BmgT120I | GGNCC | 3 cut(s) | 84, 131, 763 |
| BmiI | GGNNCC | 4 cut(s) | 61, 414, 444, 764 |
| BmsI | GCATC | 1 cut(s) | 874 |
| BmtI | GCTAGC | 1 cut(s) | 755 |
| BpmI | CTGGAG | 2 cut(s) | 597, 1163 |
| Bpu10I | CCTNAGC | 1 cut(s) | 790 |
| Bpu1102I | GCTNAGC | 1 cut(s) | 1404 |
| BpuEI | CTTGAG | 1 cut(s) | 230 |
| BsaAI | YACGTR | 1 cut(s) | 1237 |
| BsaBI | GATNNNNATC | 2 cut(s) | 932, 1370 |
| BsaHI | GRCGYC | 1 cut(s) | 71 |
| BsaI | GGTCTC | 1 cut(s) | 860 |
| BsaJI | CCNNGG | 2 cut(s) | 462, 1303 |
| BsaWI | WCCGGW | 4 cut(s) | 46, 56, 248, 851 |
| BsaXI | ACNNNNNCTCC | 6 cut(s) | 284, 314, 809, 839, 1317, 1347 |
| Bsc4I | CCNNNNNNNGG | 1 cut(s) | 675 |
| Bse118I | RCCGGY | 1 cut(s) | 851 |
| Bse1I | ACTGG | 3 cut(s) | 742, 878, 1394 |
| Bse3DI | GCAATG | 1 cut(s) | 1242 |
| Bse8I | GATNNNNATC | 2 cut(s) | 932, 1370 |
| BseDI | CCNNGG | 2 cut(s) | 462, 1303 |
| BseGI | GGATG | 3 cut(s) | 282, 339, 489 |
| BseJI | GATNNNNATC | 2 cut(s) | 932, 1370 |
| BseLI | CCNNNNNNNGG | 1 cut(s) | 675 |
| BseMI | GCAATG | 1 cut(s) | 1242 |
| BseMII | CTCAG | 4 cut(s) | 194, 240, 1023, 1395 |
| BseNI | ACTGG | 3 cut(s) | 742, 878, 1394 |
| BseRI | GAGGAG | 2 cut(s) | 405, 435 |
| BseX3I | CGGCCG | 1 cut(s) | 193 |
| BseXI | GCAGC | 5 cut(s) | 521, 662, 934, 1004, 1133 |
| BseYI | CCCAGC | 1 cut(s) | 976 |
| BsgI | GTGCAG | 2 cut(s) | 669, 1002 |
| Bsh1236I | CGCG | 2 cut(s) | 320, 464 |
| Bsh1285I | CGRYCG | 2 cut(s) | 196, 936 |
| BshFI | GGCC | 2 cut(s) | 86, 195 |
| BshTI | ACCGGT | 1 cut(s) | 851 |
| BsiEI | CGRYCG | 2 cut(s) | 196, 936 |
| BsiHKAI | GWGCWC | 2 cut(s) | 175, 216 |
| BsiSI | CCGG | 5 cut(s) | 47, 57, 192, 249, 852 |
| BslFI | GGGAC | 3 cut(s) | 336, 651, 776 |
| BslI | CCNNNNNNNGG | 1 cut(s) | 675 |
| BsmAI | GTCTC | 5 cut(s) | 203, 229, 287, 860, 1027 |
| BsmBI | CGTCTC | 4 cut(s) | 203, 229, 287, 1027 |
| BsmFI | GGGAC | 3 cut(s) | 336, 651, 776 |
| BsnI | GGCC | 2 cut(s) | 86, 195 |
| Bso31I | GGTCTC | 1 cut(s) | 860 |
| Bsp1286I | GDGCHC | 3 cut(s) | 175, 216, 415 |
| Bsp143I | GATC | 3 cut(s) | 486, 570, 933 |
| Bsp1720I | GCTNAGC | 1 cut(s) | 1404 |
| BspACI | CCGC | 9 cut(s) | 112, 219, 320, 462, 464, 491, 1202, 1211, 1412 |
| BspANI | GGCC | 2 cut(s) | 86, 195 |
| BspCNI | CTCAG | 4 cut(s) | 193, 239, 1022, 1396 |
| BspFNI | CGCG | 2 cut(s) | 320, 464 |
| BspLI | GGNNCC | 4 cut(s) | 61, 414, 444, 764 |
| BspMI | ACCTGC | 1 cut(s) | 1279 |
| BspOI | GCTAGC | 1 cut(s) | 755 |
| BspPI | GGATC | 2 cut(s) | 481, 578 |
| BspQI | GCTCTTC | 1 cut(s) | 620 |
| BspTNI | GGTCTC | 1 cut(s) | 860 |
| BsrBI | CCGCTC | 1 cut(s) | 1211 |
| BsrDI | GCAATG | 1 cut(s) | 1242 |
| BsrFI | RCCGGY | 1 cut(s) | 851 |
| BsrI | ACTGG | 3 cut(s) | 742, 878, 1394 |
| BssAI | RCCGGY | 1 cut(s) | 851 |
| BssECI | CCNNGG | 2 cut(s) | 462, 1303 |
| BssMI | GATC | 3 cut(s) | 486, 570, 933 |
| BssNI | GRCGYC | 1 cut(s) | 71 |
| BssSI | CACGAG | 3 cut(s) | 36, 670, 1132 |
| Bst2BI | CACGAG | 3 cut(s) | 36, 670, 1132 |
| Bst4CI | ACNGT | 2 cut(s) | 728, 1162 |
| Bst6I | CTCTTC | 2 cut(s) | 96, 620 |
| BstACI | GRCGYC | 1 cut(s) | 71 |
| BstBAI | YACGTR | 1 cut(s) | 1237 |
| BstC8I | GCNNGC | 6 cut(s) | 216, 611, 753, 1221, 1349, 1410 |
| BstDEI | CTNAG | 6 cut(s) | 180, 226, 790, 1009, 1069, 1404 |
| BstDSI | CCRYGG | 1 cut(s) | 462 |
| BstF5I | GGATG | 3 cut(s) | 282, 339, 489 |
| BstFNI | CGCG | 2 cut(s) | 320, 464 |
| BstHHI | GCGC | 2 cut(s) | 320, 1447 |
| BstKTI | GATC | 3 cut(s) | 489, 573, 936 |
| BstMAI | GTCTC | 5 cut(s) | 203, 229, 287, 860, 1027 |
| BstMBI | GATC | 3 cut(s) | 486, 570, 933 |
| BstMCI | CGRYCG | 2 cut(s) | 196, 936 |
| BstMWI | GCNNNNNNNGC | 9 cut(s) | 134, 317, 509, 989, 998, 1121, 1208, 1229, 1409 |
| BstNSI | RCATGY | 1 cut(s) | 599 |
| BstUI | CGCG | 2 cut(s) | 320, 464 |
| BstV1I | GCAGC | 5 cut(s) | 521, 662, 934, 1004, 1133 |
| BstX2I | RGATCY | 1 cut(s) | 570 |
| BstYI | RGATCY | 1 cut(s) | 570 |
| BstZI | CGGCCG | 1 cut(s) | 193 |
| BsuRI | GGCC | 2 cut(s) | 86, 195 |
| BtgI | CCRYGG | 1 cut(s) | 462 |
| BtsCI | GGATG | 3 cut(s) | 282, 339, 489 |
| BtsI | GCAGTG | 1 cut(s) | 144 |
| BtsIMutI | CAGTG | 3 cut(s) | 144, 1017, 1158 |
| BveI | ACCTGC | 1 cut(s) | 1279 |
| Cac8I | GCNNGC | 6 cut(s) | 216, 611, 753, 1221, 1349, 1410 |
| CaiI | CAGNNNCTG | 1 cut(s) | 1225 |
| CfoI | GCGC | 2 cut(s) | 320, 1447 |
| Cfr10I | RCCGGY | 1 cut(s) | 851 |
| Cfr13I | GGNCC | 3 cut(s) | 84, 131, 763 |
| Cfr42I | CCGCGG | 1 cut(s) | 465 |
| CseI | GACGC | 1 cut(s) | 60 |
| Csp6I | GTAC | 1 cut(s) | 826 |
| CspAI | ACCGGT | 1 cut(s) | 851 |
| CviAII | CATG | 6 cut(s) | 268, 360, 596, 901, 925, 1057 |
| CviQI | GTAC | 1 cut(s) | 826 |
| DdeI | CTNAG | 6 cut(s) | 180, 226, 790, 1009, 1069, 1404 |
| DpnI | GATC | 3 cut(s) | 488, 572, 935 |
| DpnII | GATC | 3 cut(s) | 486, 570, 933 |
| EaeI | YGGCCR | 1 cut(s) | 193 |
| EagI | CGGCCG | 1 cut(s) | 193 |
| Eam1104I | CTCTTC | 2 cut(s) | 96, 620 |
| EarI | CTCTTC | 2 cut(s) | 96, 620 |
| Ecl136II | GAGCTC | 1 cut(s) | 214 |
| EclXI | CGGCCG | 1 cut(s) | 193 |
| Eco24I | GRGCYC | 2 cut(s) | 216, 415 |
| Eco31I | GGTCTC | 1 cut(s) | 860 |
| Eco47I | GGWCC | 2 cut(s) | 131, 763 |
| Eco52I | CGGCCG | 1 cut(s) | 193 |
| Eco53kI | GAGCTC | 1 cut(s) | 214 |
| EcoICRI | GAGCTC | 1 cut(s) | 214 |
| EcoO109I | RGGNCCY | 1 cut(s) | 763 |
| EcoT38I | GRGCYC | 2 cut(s) | 216, 415 |
| Esp3I | CGTCTC | 4 cut(s) | 203, 229, 287, 1027 |
| FaeI | CATG | 6 cut(s) | 271, 363, 599, 904, 928, 1060 |
| FaqI | GGGAC | 3 cut(s) | 336, 651, 776 |
| FatI | CATG | 6 cut(s) | 267, 359, 595, 900, 924, 1056 |
| FauI | CCCGC | 4 cut(s) | 313, 457, 498, 1204 |
| FauNDI | CATATG | 1 cut(s) | 313 |
| FblI | GTMKAC | 1 cut(s) | 402 |
| Fnu4HI | GCNGC | 8 cut(s) | 113, 219, 462, 510, 651, 948, 993, 1122 |
| FokI | GGATG | 3 cut(s) | 289, 346, 496 |
| FriOI | GRGCYC | 2 cut(s) | 216, 415 |
| Fsp4HI | GCNGC | 8 cut(s) | 113, 219, 462, 510, 651, 948, 993, 1122 |
| FspBI | CTAG | 2 cut(s) | 752, 1298 |
| GlaI | GCGC | 2 cut(s) | 319, 1446 |
| GluI | GCNGC | 8 cut(s) | 113, 219, 462, 510, 651, 948, 993, 1122 |
| GsaI | CCCAGC | 1 cut(s) | 980 |
| GsuI | CTGGAG | 2 cut(s) | 597, 1163 |
| HaeIII | GGCC | 2 cut(s) | 86, 195 |
| HapII | CCGG | 5 cut(s) | 47, 57, 192, 249, 852 |
| HgaI | GACGC | 1 cut(s) | 60 |
| HhaI | GCGC | 2 cut(s) | 320, 1447 |
| Hin1I | GRCGYC | 1 cut(s) | 71 |
| Hin1II | CATG | 6 cut(s) | 271, 363, 599, 904, 928, 1060 |
| Hin6I | GCGC | 2 cut(s) | 318, 1445 |
| HinP1I | GCGC | 2 cut(s) | 318, 1445 |
| HinfI | GANTC | 4 cut(s) | 104, 1290, 1371, 1417 |
| HpaII | CCGG | 5 cut(s) | 47, 57, 192, 249, 852 |
| HphI | GGTGA | 3 cut(s) | 46, 215, 706 |
| Hpy166II | GTNNAC | 6 cut(s) | 206, 305, 403, 735, 918, 1240 |
| Hpy188I | TCNGA | 4 cut(s) | 183, 724, 1265, 1428 |
| Hpy188III | TCNNGA | 6 cut(s) | 38, 520, 576, 761, 1045, 1168 |
| Hpy8I | GTNNAC | 6 cut(s) | 206, 305, 403, 735, 918, 1240 |
| HpyAV | CCTTC | 4 cut(s) | 268, 439, 869, 905 |
| HpyCH4III | ACNGT | 2 cut(s) | 728, 1162 |
| HpyCH4IV | ACGT | 3 cut(s) | 296, 355, 1236 |
| HpyF10VI | GCNNNNNNNGC | 9 cut(s) | 134, 317, 509, 989, 998, 1121, 1208, 1229, 1409 |
| HpyF3I | CTNAG | 6 cut(s) | 180, 226, 790, 1009, 1069, 1404 |
| HpySE526I | ACGT | 3 cut(s) | 296, 355, 1236 |
| Hsp92I | GRCGYC | 1 cut(s) | 71 |
| Hsp92II | CATG | 6 cut(s) | 271, 363, 599, 904, 928, 1060 |
| HspAI | GCGC | 2 cut(s) | 318, 1445 |
| KspI | CCGCGG | 1 cut(s) | 465 |
| Kzo9I | GATC | 3 cut(s) | 486, 570, 933 |
| LguI | GCTCTTC | 1 cut(s) | 620 |
| LmnI | GCTCC | 3 cut(s) | 418, 448, 1208 |
| Lsp1109I | GCAGC | 5 cut(s) | 521, 662, 934, 1004, 1133 |
| LweI | GCATC | 1 cut(s) | 874 |
| MaeI | CTAG | 2 cut(s) | 752, 1298 |
| MaeII | ACGT | 3 cut(s) | 296, 355, 1236 |
| MaeIII | GTNAC | 2 cut(s) | 540, 847 |
| MalI | GATC | 3 cut(s) | 488, 572, 935 |
| MbiI | CCGCTC | 1 cut(s) | 1211 |
| MboI | GATC | 3 cut(s) | 486, 570, 933 |
| MboII | GAAGA | 3 cut(s) | 113, 424, 607 |
| MflI | RGATCY | 1 cut(s) | 570 |
| MhlI | GDGCHC | 3 cut(s) | 175, 216, 415 |
| MluCI | AATT | 2 cut(s) | 530, 1004 |
| MlyI | GAGTC | 2 cut(s) | 113, 1426 |
| MmeI | TCCRAC | 1 cut(s) | 1186 |
| MseI | TTAA | 3 cut(s) | 630, 710, 942 |
| MslI | CAYNNNNRTG | 1 cut(s) | 899 |
| MspA1I | CMGCKG | 1 cut(s) | 464 |
| MspI | CCGG | 5 cut(s) | 47, 57, 192, 249, 852 |
| MvnI | CGCG | 2 cut(s) | 320, 464 |
| MwoI | GCNNNNNNNGC | 9 cut(s) | 134, 317, 509, 989, 998, 1121, 1208, 1229, 1409 |
| NdeI | CATATG | 1 cut(s) | 313 |
| NdeII | GATC | 3 cut(s) | 486, 570, 933 |
| NheI | GCTAGC | 1 cut(s) | 751 |
| NlaIII | CATG | 6 cut(s) | 271, 363, 599, 904, 928, 1060 |
| NlaIV | GGNNCC | 4 cut(s) | 61, 414, 444, 764 |
| NmeAIII | GCCGAG | 1 cut(s) | 1284 |
| NmuCI | GTSAC | 1 cut(s) | 540 |
| NspI | RCATGY | 1 cut(s) | 599 |
| PciSI | GCTCTTC | 1 cut(s) | 620 |
| PfeI | GAWTC | 2 cut(s) | 1290, 1371 |
| PinAI | ACCGGT | 1 cut(s) | 851 |
| PkrI | GCNGC | 8 cut(s) | 114, 220, 463, 511, 652, 949, 994, 1123 |
| Ple19I | CGATCG | 1 cut(s) | 936 |
| PleI | GAGTC | 2 cut(s) | 112, 1425 |
| PpsI | GAGTC | 2 cut(s) | 112, 1425 |
| Ppu21I | YACGTR | 1 cut(s) | 1237 |
| PpuMI | RGGWCCY | 1 cut(s) | 763 |
| Psp124BI | GAGCTC | 1 cut(s) | 216 |
| Psp1406I | AACGTT | 1 cut(s) | 355 |
| Psp5II | RGGWCCY | 1 cut(s) | 763 |
| PspFI | CCCAGC | 1 cut(s) | 976 |
| PspN4I | GGNNCC | 4 cut(s) | 61, 414, 444, 764 |
| PspPI | GGNCC | 3 cut(s) | 84, 131, 763 |
| PspPPI | RGGWCCY | 1 cut(s) | 763 |
| PstNI | CAGNNNCTG | 1 cut(s) | 1225 |
| PsuI | RGATCY | 1 cut(s) | 570 |
| PvuI | CGATCG | 1 cut(s) | 936 |
| RsaI | GTAC | 1 cut(s) | 827 |
| RsaNI | GTAC | 1 cut(s) | 826 |
| RseI | CAYNNNNRTG | 1 cut(s) | 899 |
| SacI | GAGCTC | 1 cut(s) | 216 |
| SacII | CCGCGG | 1 cut(s) | 465 |
| SapI | GCTCTTC | 1 cut(s) | 620 |
| SaqAI | TTAA | 3 cut(s) | 630, 710, 942 |
| SatI | GCNGC | 8 cut(s) | 113, 219, 462, 510, 651, 948, 993, 1122 |
| Sau3AI | GATC | 3 cut(s) | 486, 570, 933 |
| Sau96I | GGNCC | 3 cut(s) | 84, 131, 763 |
| SchI | GAGTC | 2 cut(s) | 113, 1426 |
| SduI | GDGCHC | 3 cut(s) | 175, 216, 415 |
| SfaNI | GCATC | 1 cut(s) | 874 |
| Sfr303I | CCGCGG | 1 cut(s) | 465 |
| SgrBI | CCGCGG | 1 cut(s) | 465 |
| SinI | GGWCC | 2 cut(s) | 131, 763 |
| SmiMI | CAYNNNNRTG | 1 cut(s) | 899 |
| SmlI | CTYRAG | 1 cut(s) | 209 |
| SmoI | CTYRAG | 1 cut(s) | 209 |
| Sse9I | AATT | 2 cut(s) | 530, 1004 |
| SsiI | CCGC | 9 cut(s) | 112, 219, 320, 462, 464, 491, 1202, 1211, 1412 |
| SspMI | CTAG | 2 cut(s) | 752, 1298 |
| SstI | GAGCTC | 1 cut(s) | 216 |
| TaaI | ACNGT | 2 cut(s) | 728, 1162 |
| TaiI | ACGT | 3 cut(s) | 299, 358, 1239 |
| TaqI | TCGA | 5 cut(s) | 107, 882, 932, 968, 1420 |
| TasI | AATT | 2 cut(s) | 530, 1004 |
| TauI | GCSGC | 3 cut(s) | 115, 221, 464 |
| TfiI | GAWTC | 2 cut(s) | 1290, 1371 |
| Tru1I | TTAA | 3 cut(s) | 630, 710, 942 |
| Tru9I | TTAA | 3 cut(s) | 630, 710, 942 |
| TscAI | CASTG | 3 cut(s) | 151, 1017, 1165 |
| TseFI | GTSAC | 1 cut(s) | 540 |
| TseI | GCWGC | 5 cut(s) | 509, 650, 947, 992, 1121 |
| Tsp45I | GTSAC | 1 cut(s) | 540 |
| TspDTI | ATGAA | 3 cut(s) | 348, 607, 917 |
| TspRI | CASTG | 3 cut(s) | 151, 1017, 1165 |
| VpaK11BI | GGWCC | 2 cut(s) | 131, 763 |
| XapI | RAATTY | 2 cut(s) | 530, 1004 |
| XceI | RCATGY | 1 cut(s) | 599 |
| XmiI | GTMKAC | 1 cut(s) | 402 |
| XspI | CTAG | 2 cut(s) | 752, 1298 |