Prupe.1G384800_v2.0.a1

Belongs to the multi antimicrobial extrusion (MATE) (TC 2.A.66.1) family

Basic Information

Type: gene
Biological Identity
prunus_persica
Pp01
Physical Location & Seq
Forward (+)
34503329 .. 34507109
3781 bp
Loading structure...
UTR
Exon/CDS
Intron
Prupe.1G384800.2

Sequence Viewer

Length: 1446 bp
ATGGACAATAATACCCCGCTCCTCGCTTCGAACCACAGCGGCCATGAACAAGAAGAGAAAGTCGGCATTGTTAAGGAGTTCGGGATCGAGTCTAAGAAGCTATGGAAGATTGCGGGCCCGGCTATCTTCACCGCCATATGCCAGTACTCCTTGGGTGCTCTCACTCAGGTCTTTTCCGGGTTCGTCGGGGATGTCGAGCTAGCCGCCGTCTCCGTCGAGAACTCCGTCATCGCCGGCCTGGCTTTCGGTGTCATGCTGGGAATGGGGAGTGCACTGGAGACGCTGTGTGGGCAAGCATACGGTGCGGGGCAGATCAGGATGTTGGGGATATACATGCAGAGATCGTGGATCATTTTGCTGGTAACAGCTTGTGTTTTGGTGCCGGTCTATGTTTGGTCGCCTCCCATTCTTGAGCTGGTCGGAGAGACCGATCAGATCTCAGAGGCCGCCGGAAAGTTTGCTCTGTGGATGCTTCCACAATTGTTTGCCTACGCACTCAATTTTCCCATACAAAAGTTTTTGCAAGCACAGAGGAAGGTCTTTGTCATGGCCTGGATATCAGCTGTAGTGCTAGTATTACATGCAGTATTCAGCTGGTTGTTGATATTGAAGCTTGGGTGGGGCTTAACTGGGGCAGCAGTCACACTCAACATATCATGGTGGCTAATTGTTATTGCCCAATTGTTGTACATCTTCATCACCAAGTCAGATGGTGCTTGGAGTGGATTCTCTTGGCTTGCATTTGCAGACTTATTTGGCTTTGTTAAGCTCTCTTTAGCTTCTGCTGTCATGTTATGCTTGGAATTCTGGTACTTGATGGTGCTAGTGGTTATAACAGGCCGTTTGAAGAACCCTTTGATCCCAGTTGATGCCATCTCTATTTGCATGAACATAAATGGATGGGATGCAATGATTGCGATTGGGTTTAATGCTGCAATAAGTGTGAGAGTATCAAATGAACTTGGAGCTGGAAATGCCAAGATAGCGAAATTTGCTGTGGTAGTGGTTTCCGTCACTTCAGTGGCTATAGGAGTGGTTTGCTTGGCTGTAGTTTTGACCACAAGAGATTATTTCCCGTACCTTTTCACCAGCAGTGAAGCCGTTGCTAAGGAAACTACTCAACTTGCACTCTTGCTTGGAATCACAGTCCTTCTCAACAGCCTTCAACCAGTCTTATCTGGTGTCGCTGTTGGAGCAGGATGGCAAGCTCTTGTCGCATACATCAACATTGGGTGTTACTATATCGTCGGATTGCCAGCTGGAATACTTCTTGGATTCACATTTGGTTTTGGAGTGGAGGGTATTTGGTCAGGGATGATTGGTGGCATTGCCTTGCAAACCCTAATCTTGATCGTGGTCGTTTCCTTAACTAACTGGAACAAAGAAGCTGATGAGGCAGAGAGCCGTGTCCAGAAGTGGGGAGGAGGAGTAGCTGCACAGGATTAA

Protein Analysis

482

Amino Acids

51.63

Weight (kDa)

5.37

Isoelectric Point (pI)

27.12

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0016632)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G47530 AT1G47530
fragaria_vesca FvH4_2g40430
malus_domestica MD00G1039400.v1.1 MD08G1037600.v1.1
prunus_persica Prupe.1G384800_v2.0.a1
pyrus_communis pycom08g02990
rosa_chinensis RchiOBHm_Chr6g0300301
rosa_laevigata RLG00000011349
rosa_multiflora Rmu_sc0001670.1_g000023
rosa_roxburghii Rroxscaffold_7G00167910
rosa_rugosa Rorug06G0294800
rosa_samantha Rh6CG422300
rosa_wichuraiana Rw6G035630

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 833
AccB1I GGYRCC 1 cut(s) 379
AccBSI CCGCTC 1 cut(s) 19
AciI CCGC 7 cut(s) 17, 39, 113, 132, 204, 305, 447
AclWI GGATC 3 cut(s) 92, 356, 853
AcoI YGGCCR 1 cut(s) 40
AcsI RAATTY 2 cut(s) 803, 989
AcuI CTGAAG 1 cut(s) 1002
AfaI GTAC 4 cut(s) 146, 689, 812, 1079
AfiI CCNNNNNNNGG 1 cut(s) 1417
AgsI TTSAA 3 cut(s) 610, 847, 1166
AjnI CCWGG 2 cut(s) 237, 551
AleI CACNNNNGTG 1 cut(s) 1019
Alw21I GWGCWC 2 cut(s) 160, 274
Alw26I GTCTC 3 cut(s) 214, 272, 419
Alw44I GTGCAC 1 cut(s) 270
AlwI GGATC 3 cut(s) 92, 356, 853
AoxI GGCC 6 cut(s) 40, 115, 235, 444, 549, 838
ApaI GGGCCC 1 cut(s) 119
ApaLI GTGCAC 1 cut(s) 270
ApeKI GCWGC 3 cut(s) 635, 932, 1433
ApoI RAATTY 2 cut(s) 803, 989
AspS9I GGNCC 2 cut(s) 115, 116
AsuC2I CCSGG 2 cut(s) 119, 178
AsuHPI GGTGA 3 cut(s) 121, 691, 1078
AsuII TTCGAA 1 cut(s) 29
AsuNHI GCTAGC 1 cut(s) 199
BaeGI GKGCMC 2 cut(s) 119, 274
BanI GGYRCC 1 cut(s) 379
BanII GRGCYC 1 cut(s) 119
Bbv12I GWGCWC 2 cut(s) 160, 274
BbvI GCAGC 3 cut(s) 647, 919, 1420
BccI CCATC 5 cut(s) 704, 811, 881, 894, 1194
BceAI ACGGC 4 cut(s) 191, 825, 1085, 1389
BciT130I CCWGG 2 cut(s) 239, 553
BcnI CCSGG 2 cut(s) 119, 178
BcoDI GTCTC 3 cut(s) 214, 272, 419
BfaI CTAG 3 cut(s) 200, 572, 824
BfmI CTRYAG 3 cut(s) 564, 1026, 1047
BglI GCCNNNNNGGC 1 cut(s) 239
BglII AGATCT 1 cut(s) 435
BisI GCNGC 6 cut(s) 40, 204, 447, 636, 933, 1434
BlsI GCNGC 6 cut(s) 41, 205, 448, 637, 934, 1435
BmcAI AGTACT 1 cut(s) 146
Bme1390I CCNGG 4 cut(s) 119, 178, 239, 553
BmgT120I GGNCC 2 cut(s) 115, 116
BmiI GGNNCC 2 cut(s) 117, 381
BmrFI CCNGG 4 cut(s) 119, 178, 239, 553
BmrI ACTGGG 2 cut(s) 639, 857
BmsI GCATC 3 cut(s) 459, 859, 895
BmtI GCTAGC 1 cut(s) 203
BmuI ACTGGG 2 cut(s) 639, 857
BpmI CTGGAG 1 cut(s) 296
Bpu10I CCTNAGC 1 cut(s) 1107
Bpu14I TTCGAA 1 cut(s) 29
BpuEI CTTGAG 1 cut(s) 431
BpuMI CCSGG 2 cut(s) 119, 178
BsaI GGTCTC 1 cut(s) 419
BsaJI CCNNGG 1 cut(s) 150
BsaXI ACNNNNNCTCC 4 cut(s) 269, 299, 1413, 1443
Bsc4I CCNNNNNNNGG 1 cut(s) 1417
Bse118I RCCGGY 2 cut(s) 233, 382
Bse1I ACTGG 6 cut(s) 142, 279, 634, 863, 1169, 1379
Bse3DI GCAATG 2 cut(s) 915, 1326
BseBI CCWGG 2 cut(s) 239, 553
BseDI CCNNGG 1 cut(s) 150
BseGI GGATG 7 cut(s) 196, 324, 474, 905, 910, 1205, 1320
BseLI CCNNNNNNNGG 1 cut(s) 1417
BseMI GCAATG 2 cut(s) 915, 1326
BseMII CTCAG 2 cut(s) 179, 453
BseNI ACTGG 6 cut(s) 142, 279, 634, 863, 1169, 1379
BseRI GAGGAG 3 cut(s) 11, 1437, 1440
BseSI GKGCMC 2 cut(s) 119, 274
BseXI GCAGC 3 cut(s) 647, 919, 1420
BseYI CCCAGC 1 cut(s) 256
BsgI GTGCAG 1 cut(s) 1419
BshFI GGCC 6 cut(s) 42, 117, 237, 446, 551, 840
BshNI GGYRCC 1 cut(s) 379
BsiHKAI GWGCWC 2 cut(s) 160, 274
BsiSI CCGG 5 cut(s) 119, 177, 234, 383, 450
BslI CCNNNNNNNGG 1 cut(s) 1417
BsmAI GTCTC 3 cut(s) 214, 272, 419
BsmBI CGTCTC 2 cut(s) 214, 272
BsnI GGCC 6 cut(s) 42, 117, 237, 446, 551, 840
Bso31I GGTCTC 1 cut(s) 419
Bsp119I TTCGAA 1 cut(s) 29
Bsp120I GGGCCC 1 cut(s) 115
Bsp1286I GDGCHC 3 cut(s) 119, 160, 274
Bsp1407I TGTACA 1 cut(s) 687
Bsp143I GATC 8 cut(s) 84, 312, 341, 348, 430, 435, 858, 1350
BspACI CCGC 7 cut(s) 17, 39, 113, 132, 204, 305, 447
BspANI GGCC 6 cut(s) 42, 117, 237, 446, 551, 840
BspCNI CTCAG 2 cut(s) 178, 452
BspLI GGNNCC 2 cut(s) 117, 381
BspOI GCTAGC 1 cut(s) 203
BspPI GGATC 3 cut(s) 92, 356, 853
BspT104I TTCGAA 1 cut(s) 29
BspT107I GGYRCC 1 cut(s) 379
BspTNI GGTCTC 1 cut(s) 419
BsrBI CCGCTC 1 cut(s) 19
BsrDI GCAATG 2 cut(s) 915, 1326
BsrFI RCCGGY 2 cut(s) 233, 382
BsrGI TGTACA 1 cut(s) 687
BsrI ACTGG 6 cut(s) 142, 279, 634, 863, 1169, 1379
BssAI RCCGGY 2 cut(s) 233, 382
BssECI CCNNGG 1 cut(s) 150
BssMI GATC 8 cut(s) 84, 312, 341, 348, 430, 435, 858, 1350
BssT1I CCWWGG 1 cut(s) 150
Bst2UI CCWGG 2 cut(s) 239, 553
Bst4CI ACNGT 2 cut(s) 302, 1147
Bst6I CTCTTC 1 cut(s) 48
BstAPI GCANNNNNTGC 2 cut(s) 302, 914
BstAUI TGTACA 1 cut(s) 687
BstBI TTCGAA 1 cut(s) 29
BstC8I GCNNGC 8 cut(s) 115, 201, 235, 294, 525, 738, 1206, 1257
BstDEI CTNAG 4 cut(s) 93, 165, 439, 1107
BstF5I GGATG 7 cut(s) 196, 324, 474, 905, 910, 1205, 1320
BstKTI GATC 8 cut(s) 87, 315, 344, 351, 433, 438, 861, 1353
BstMAI GTCTC 3 cut(s) 214, 272, 419
BstMBI GATC 8 cut(s) 84, 312, 341, 348, 430, 435, 858, 1350
BstNI CCWGG 2 cut(s) 239, 553
BstNSI RCATGY 2 cut(s) 337, 584
BstSCI CCNGG 4 cut(s) 117, 176, 237, 551
BstSFI CTRYAG 3 cut(s) 564, 1026, 1047
BstSLI GKGCMC 2 cut(s) 119, 274
BstV1I GCAGC 3 cut(s) 647, 919, 1420
BstX2I RGATCY 1 cut(s) 435
BstYI RGATCY 1 cut(s) 435
BsuRI GGCC 6 cut(s) 42, 117, 237, 446, 551, 840
BtgZI GCGATG 1 cut(s) 214
BtsCI GGATG 7 cut(s) 196, 324, 474, 905, 910, 1205, 1320
BtsI GCAGTG 1 cut(s) 1099
BtsIMutI CAGTG 3 cut(s) 272, 1026, 1099
Cac8I GCNNGC 8 cut(s) 115, 201, 235, 294, 525, 738, 1206, 1257
Cfr10I RCCGGY 2 cut(s) 233, 382
Cfr13I GGNCC 2 cut(s) 115, 116
CseI GACGC 1 cut(s) 289
Csp6I GTAC 4 cut(s) 145, 688, 811, 1078
CviAII CATG 8 cut(s) 44, 253, 334, 547, 581, 657, 790, 886
CviQI GTAC 4 cut(s) 145, 688, 811, 1078
DdeI CTNAG 4 cut(s) 93, 165, 439, 1107
DpnI GATC 8 cut(s) 86, 314, 343, 350, 432, 437, 860, 1352
DpnII GATC 8 cut(s) 84, 312, 341, 348, 430, 435, 858, 1350
EaeI YGGCCR 1 cut(s) 40
Eam1104I CTCTTC 1 cut(s) 48
EarI CTCTTC 1 cut(s) 48
Eco130I CCWWGG 1 cut(s) 150
Eco24I GRGCYC 1 cut(s) 119
Eco31I GGTCTC 1 cut(s) 419
Eco32I GATATC 1 cut(s) 558
Eco57I CTGAAG 1 cut(s) 1002
EcoRI GAATTC 1 cut(s) 803
EcoRII CCWGG 2 cut(s) 237, 551
EcoRV GATATC 1 cut(s) 558
EcoT14I CCWWGG 1 cut(s) 150
EcoT38I GRGCYC 1 cut(s) 119
ErhI CCWWGG 1 cut(s) 150
Esp3I CGTCTC 2 cut(s) 214, 272
FaeI CATG 8 cut(s) 47, 256, 337, 550, 584, 660, 793, 889
FatI CATG 8 cut(s) 43, 252, 333, 546, 580, 656, 789, 885
FauI CCCGC 3 cut(s) 24, 106, 298
FauNDI CATATG 1 cut(s) 137
Fnu4HI GCNGC 6 cut(s) 40, 204, 447, 636, 933, 1434
FokI GGATG 7 cut(s) 203, 331, 481, 912, 917, 1212, 1327
FriOI GRGCYC 1 cut(s) 119
Fsp4HI GCNGC 6 cut(s) 40, 204, 447, 636, 933, 1434
FspBI CTAG 3 cut(s) 200, 572, 824
GluI GCNGC 6 cut(s) 40, 204, 447, 636, 933, 1434
GsaI CCCAGC 1 cut(s) 260
GsuI CTGGAG 1 cut(s) 296
HaeIII GGCC 6 cut(s) 42, 117, 237, 446, 551, 840
HapII CCGG 5 cut(s) 119, 177, 234, 383, 450
HgaI GACGC 1 cut(s) 289
Hin1II CATG 8 cut(s) 47, 256, 337, 550, 584, 660, 793, 889
HindIII AAGCTT 1 cut(s) 611
HinfI GANTC 4 cut(s) 89, 726, 1140, 1275
HpaII CCGG 5 cut(s) 119, 177, 234, 383, 450
HphI GGTGA 3 cut(s) 121, 691, 1078
Hpy166II GTNNAC 1 cut(s) 272
Hpy188I TCNGA 5 cut(s) 422, 435, 442, 709, 1250
Hpy188III TCNNGA 6 cut(s) 82, 217, 316, 410, 1348, 1411
Hpy8I GTNNAC 1 cut(s) 272
Hpy99I CGWCG 3 cut(s) 188, 218, 1250
HpyAV CCTTC 3 cut(s) 529, 1160, 1172
HpyCH4III ACNGT 2 cut(s) 302, 1147
HpyF3I CTNAG 4 cut(s) 93, 165, 439, 1107
Hsp92II CATG 8 cut(s) 47, 256, 337, 550, 584, 660, 793, 889
KroI GCCGGC 1 cut(s) 233
KroNI GCCGGC 1 cut(s) 235
Kzo9I GATC 8 cut(s) 84, 312, 341, 348, 430, 435, 858, 1350
LmnI GCTCC 3 cut(s) 24, 965, 1193
Lsp1109I GCAGC 3 cut(s) 647, 919, 1420
LweI GCATC 3 cut(s) 459, 859, 895
MaeI CTAG 3 cut(s) 200, 572, 824
MaeIII GTNAC 4 cut(s) 361, 640, 1012, 1235
MalI GATC 8 cut(s) 86, 314, 343, 350, 432, 437, 860, 1352
MbiI CCGCTC 1 cut(s) 19
MboI GATC 8 cut(s) 84, 312, 341, 348, 430, 435, 858, 1350
MboII GAAGA 5 cut(s) 65, 118, 118, 685, 859
MfeI CAATTG 2 cut(s) 479, 680
MflI RGATCY 1 cut(s) 435
MhlI GDGCHC 3 cut(s) 119, 160, 274
MluCI AATT 6 cut(s) 479, 499, 666, 680, 803, 989
MlyI GAGTC 1 cut(s) 98
MmeI TCCRAC 3 cut(s) 400, 1171, 1228
MnlI CCTC 8 cut(s) 32, 411, 436, 525, 1291, 1387, 1415, 1418
MroNI GCCGGC 1 cut(s) 233
MseI TTAA 6 cut(s) 72, 626, 765, 927, 1367, 1444
MslI CAYNNNNRTG 1 cut(s) 1019
MspA1I CMGCKG 4 cut(s) 39, 563, 594, 1259
MspI CCGG 5 cut(s) 119, 177, 234, 383, 450
MspR9I CCNGG 4 cut(s) 119, 178, 239, 553
MunI CAATTG 2 cut(s) 479, 680
MvaI CCWGG 2 cut(s) 239, 553
NaeI GCCGGC 1 cut(s) 235
NciI CCSGG 2 cut(s) 119, 178
NdeI CATATG 1 cut(s) 137
NdeII GATC 8 cut(s) 84, 312, 341, 348, 430, 435, 858, 1350
NgoMIV GCCGGC 1 cut(s) 233
NheI GCTAGC 1 cut(s) 199
NlaIII CATG 8 cut(s) 47, 256, 337, 550, 584, 660, 793, 889
NlaIV GGNNCC 2 cut(s) 117, 381
NmuCI GTSAC 2 cut(s) 640, 1012
NspI RCATGY 2 cut(s) 337, 584
NspV TTCGAA 1 cut(s) 29
OliI CACNNNNGTG 1 cut(s) 1019
PcsI WCGNNNNNNNCGW 3 cut(s) 192, 222, 426
PdiI GCCGGC 1 cut(s) 235
PfeI GAWTC 3 cut(s) 726, 1140, 1275
PkrI GCNGC 6 cut(s) 41, 205, 448, 637, 934, 1435
PleI GAGTC 1 cut(s) 97
PpsI GAGTC 1 cut(s) 97
PsiI TTATAA 1 cut(s) 833
Psp6I CCWGG 2 cut(s) 237, 551
PspFI CCCAGC 1 cut(s) 256
PspGI CCWGG 2 cut(s) 237, 551
PspN4I GGNNCC 2 cut(s) 117, 381
PspOMI GGGCCC 1 cut(s) 115
PspPI GGNCC 2 cut(s) 115, 116
PsuI RGATCY 1 cut(s) 435
PvuII CAGCTG 3 cut(s) 563, 594, 1259
RsaI GTAC 4 cut(s) 146, 689, 812, 1079
RsaNI GTAC 4 cut(s) 145, 688, 811, 1078
RseI CAYNNNNRTG 1 cut(s) 1019
SaqAI TTAA 6 cut(s) 72, 626, 765, 927, 1367, 1444
SatI GCNGC 6 cut(s) 40, 204, 447, 636, 933, 1434
Sau3AI GATC 8 cut(s) 84, 312, 341, 348, 430, 435, 858, 1350
Sau96I GGNCC 2 cut(s) 115, 116
ScaI AGTACT 1 cut(s) 146
SchI GAGTC 1 cut(s) 98
ScrFI CCNGG 4 cut(s) 119, 178, 239, 553
SduI GDGCHC 3 cut(s) 119, 160, 274
SfaNI GCATC 3 cut(s) 459, 859, 895
SfcI CTRYAG 3 cut(s) 564, 1026, 1047
SfuI TTCGAA 1 cut(s) 29
SmiMI CAYNNNNRTG 1 cut(s) 1019
SmlI CTYRAG 1 cut(s) 410
SmoI CTYRAG 1 cut(s) 410
Sse9I AATT 6 cut(s) 479, 499, 666, 680, 803, 989
SsiI CCGC 7 cut(s) 17, 39, 113, 132, 204, 305, 447
SspMI CTAG 3 cut(s) 200, 572, 824
StyD4I CCNGG 4 cut(s) 117, 176, 237, 551
StyI CCWWGG 1 cut(s) 150
TaaI ACNGT 2 cut(s) 302, 1147
TaqI TCGA 4 cut(s) 29, 87, 195, 216
TaqII GACCGA 1 cut(s) 443
TasI AATT 6 cut(s) 479, 499, 666, 680, 803, 989
TatI WGTACW 2 cut(s) 144, 687
TauI GCSGC 3 cut(s) 42, 206, 449
TfiI GAWTC 3 cut(s) 726, 1140, 1275
Tru1I TTAA 6 cut(s) 72, 626, 765, 927, 1367, 1444
Tru9I TTAA 6 cut(s) 72, 626, 765, 927, 1367, 1444
TscAI CASTG 3 cut(s) 279, 1026, 1099
TseFI GTSAC 2 cut(s) 640, 1012
TseI GCWGC 3 cut(s) 635, 932, 1433
Tsp45I GTSAC 2 cut(s) 640, 1012
TspDTI ATGAA 4 cut(s) 60, 685, 902, 972
TspGWI ACGGA 3 cut(s) 202, 214, 1000
TspRI CASTG 3 cut(s) 279, 1026, 1099
VneI GTGCAC 1 cut(s) 270
XapI RAATTY 2 cut(s) 803, 989
XceI RCATGY 2 cut(s) 337, 584
XcmI CCANNNNNNNNNTGG 1 cut(s) 412
XspI CTAG 3 cut(s) 200, 572, 824
ZrmI AGTACT 1 cut(s) 146
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.