AT1G50370

serine threonine-protein phosphatase

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
arabidopsis_thaliana
1
OG0013439
Physical Location & Seq
Forward (+)
18658508 .. 18662052
3545 bp
Loading structure...
UTR
Exon/CDS
Intron
AT1G50370.1

Sequence Viewer

Length: 912 bp
ATGGATTTAGATCAATGGATTTCCAAGGTTAAAGACGGCCAACATCTCTCTGAGGACGAGCTTCAACTTCTCTGCGAATACGTGAAAGAAATTCTTATTGAGGAATCAAATGTACAACCTGTCAACAGTCCTGTCACCGTCTGTGGTGATATCCATGGCCAGTTTCATGATCTTATGAAACTTTTCCAGACCGGAGGTCATGTTCCCGAGACCAATTACATATTTATGGGGGATTTCGTTGATAGAGGTTACAACAGTCTTGAAGTTTTCACCATTCTTTTGCTTCTTAAAGCAAGACATCCAGCCAATATCACTCTTTTGCGTGGAAATCATGAAAGTAGACAGCTAACTCAGGTGTATGGTTTCTATGACGAATGCCAAAGGAAGTATGGTAATGCTAATGCTTGGAGATATTGCACGGATGTTTTTGACTATCTTACACTTTCAGCTATTATAGATGGCACTGTTCTATGTGTTCATGGTGGCCTTTCACCTGATGTACGGACAATTGACCAGATAAGATTGATTGAGCGGAATTGCGAAATACCGCATGAAGGACCCTTCTGTGATCTTATGTGGAGTGATCCTGAAGATATTGAAACATGGGCTGTCAGTCCACGTGGAGCTGGTTGGCTTTTCGGGTCCAGGGTTACCACTGAGTTTAACCATATTAACAATCTTGATCTAGTATGTCGCGCTCACCAGCTTGTACAAGAAGGTCTCAAGTACATGTTCCAAGATAAAGGTCTTGTAACTGTGTGGTCTGCGCCTAATTACTGCTACCGTTGTGGGAATGTGGCTTCTATATTGAGTTTCAATGACAACATGGAAAGGGAAGTGAAGTTCTTCACGGAGACAGAAGAGAACAATCAAATGAGAGGGCCAAGGACAGGTGTTCCTTATTTCCTGTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
Metallophos

Protein Analysis

303

Amino Acids

34.82

Weight (kDa)

4.93

Isoelectric Point (pI)

39.06

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Metallophos PF00149 44 - 237 2.3e-46 Calcineurin-like phosphoesterase
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready
iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0013439)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G50370 AT3G19980
fragaria_vesca FvH4_4g37310
malus_domestica MD13G1001400.v1.1 MD16G1004700.v1.1
prunus_persica Prupe.1G351300_v2.0.a1 Prupe.1G351300_v2.0.a1
pyrus_communis pycom16g00010
rosa_chinensis RchiOBHm_Chr4g0447141
rosa_laevigata RLG00000005601
rosa_multiflora Rmu_ssc0000178.1_g000005
rosa_roxburghii Rroxscaffold_5G00387480
rosa_rugosa Rorug04G0378500
rosa_samantha Rh4AG439700 Rh4BG448800 Rh4CG465800 Rh4DG447200
rosa_wichuraiana Rw4G037620

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccBSI CCGCTC 1 cut(s) 532
AccI GTMKAC 1 cut(s) 340
AccII CGCG 1 cut(s) 696
AciI CCGC 2 cut(s) 532, 548
AclWI GGATC 1 cut(s) 578
AcoI YGGCCR 2 cut(s) 37, 157
AcsI RAATTY 1 cut(s) 90
AcuI CTGAAG 1 cut(s) 609
AcvI CACGTG 1 cut(s) 620
AfaI GTAC 4 cut(s) 114, 501, 711, 728
AfiI CCNNNNNNNGG 2 cut(s) 554, 890
AflIII ACRYGT 1 cut(s) 729
AgsI TTSAA 4 cut(s) 65, 263, 599, 817
AhdI GACNNNNNGTC 1 cut(s) 195
AjnI CCWGG 1 cut(s) 644
AloI GAACNNNNNNTCC 4 cut(s) 186, 218, 827, 859
AluBI AGCT 5 cut(s) 61, 346, 449, 626, 706
AluI AGCT 5 cut(s) 61, 346, 449, 626, 706
Alw26I GTCTC 3 cut(s) 203, 725, 848
AlwI GGATC 1 cut(s) 578
Ama87I CYCGRG 1 cut(s) 206
AoxI GGCC 4 cut(s) 37, 157, 484, 881
ApoI RAATTY 1 cut(s) 90
Asp700I GAANNNNTTC 2 cut(s) 182, 845
AspLEI GCGC 2 cut(s) 698, 769
AspS9I GGNCC 3 cut(s) 557, 642, 881
AsuHPI GGTGA 5 cut(s) 127, 158, 262, 483, 692
AvaI CYCGRG 1 cut(s) 206
AvaII GGWCC 2 cut(s) 557, 642
BalI TGGCCA 1 cut(s) 159
BbrPI CACGTG 1 cut(s) 620
BccI CCATC 1 cut(s) 452
BceAI ACGGC 1 cut(s) 52
BciT130I CCWGG 1 cut(s) 646
BcoDI GTCTC 3 cut(s) 203, 725, 848
BfaI CTAG 1 cut(s) 686
Bme1390I CCNGG 1 cut(s) 646
Bme18I GGWCC 2 cut(s) 557, 642
BmeRI GACNNNNNGTC 1 cut(s) 195
BmeT110I CYCGRG 1 cut(s) 206
BmgT120I GGNCC 3 cut(s) 557, 642, 881
BmiI GGNNCC 2 cut(s) 559, 643
BmrFI CCNGG 1 cut(s) 646
BpuEI CTTGAG 1 cut(s) 707
BsaAI YACGTR 2 cut(s) 82, 620
BsaBI GATNNNNATC 1 cut(s) 9
BsaI GGTCTC 2 cut(s) 203, 725
BsaJI CCNNGG 4 cut(s) 24, 154, 645, 884
BsaWI WCCGGW 1 cut(s) 191
BsaXI ACNNNNNCTCC 2 cut(s) 186, 216
Bsc4I CCNNNNNNNGG 2 cut(s) 554, 890
Bse1I ACTGG 1 cut(s) 160
Bse8I GATNNNNATC 1 cut(s) 9
BseBI CCWGG 1 cut(s) 646
BseDI CCNNGG 4 cut(s) 24, 154, 645, 884
BseGI GGATG 2 cut(s) 298, 427
BseJI GATNNNNATC 1 cut(s) 9
BseLI CCNNNNNNNGG 2 cut(s) 554, 890
BseMII CTCAG 3 cut(s) 42, 365, 648
BseNI ACTGG 1 cut(s) 160
Bsh1236I CGCG 1 cut(s) 696
BshFI GGCC 4 cut(s) 39, 159, 486, 883
BsiHKCI CYCGRG 1 cut(s) 206
BsiSI CCGG 1 cut(s) 192
BslI CCNNNNNNNGG 2 cut(s) 554, 890
BsmAI GTCTC 3 cut(s) 203, 725, 848
BsmI GAATGC 1 cut(s) 380
BsnI GGCC 4 cut(s) 39, 159, 486, 883
Bso31I GGTCTC 2 cut(s) 203, 725
BsoBI CYCGRG 1 cut(s) 206
Bsp1407I TGTACA 2 cut(s) 112, 709
Bsp143I GATC 5 cut(s) 10, 169, 568, 583, 682
Bsp19I CCATGG 1 cut(s) 154
BspACI CCGC 2 cut(s) 532, 548
BspANI GGCC 4 cut(s) 39, 159, 486, 883
BspCNI CTCAG 3 cut(s) 43, 364, 649
BspFNI CGCG 1 cut(s) 696
BspHI TCATGA 2 cut(s) 166, 331
BspLI GGNNCC 2 cut(s) 559, 643
BspPI GGATC 1 cut(s) 578
BspTNI GGTCTC 2 cut(s) 203, 725
BsrBI CCGCTC 1 cut(s) 532
BsrGI TGTACA 2 cut(s) 112, 709
BsrI ACTGG 1 cut(s) 160
BssECI CCNNGG 4 cut(s) 24, 154, 645, 884
BssMI GATC 5 cut(s) 10, 169, 568, 583, 682
BssT1I CCWWGG 3 cut(s) 24, 154, 884
Bst2UI CCWGG 1 cut(s) 646
Bst4CI ACNGT 6 cut(s) 128, 139, 257, 466, 757, 785
Bst6I CTCTTC 1 cut(s) 855
BstAUI TGTACA 2 cut(s) 112, 709
BstBAI YACGTR 2 cut(s) 82, 620
BstDEI CTNAG 3 cut(s) 51, 351, 657
BstDSI CCRYGG 1 cut(s) 154
BstEII GGTNACC 1 cut(s) 649
BstF5I GGATG 2 cut(s) 298, 427
BstFNI CGCG 1 cut(s) 696
BstHHI GCGC 2 cut(s) 698, 769
BstKTI GATC 5 cut(s) 13, 172, 571, 586, 685
BstMAI GTCTC 3 cut(s) 203, 725, 848
BstMBI GATC 5 cut(s) 10, 169, 568, 583, 682
BstNI CCWGG 1 cut(s) 646
BstNSI RCATGY 1 cut(s) 733
BstPI GGTNACC 1 cut(s) 649
BstSCI CCNGG 1 cut(s) 644
BstUI CGCG 1 cut(s) 696
BsuRI GGCC 4 cut(s) 39, 159, 486, 883
BtgI CCRYGG 1 cut(s) 154
BtsCI GGATG 2 cut(s) 298, 427
BtsIMutI CAGTG 2 cut(s) 462, 654
CciI TCATGA 2 cut(s) 166, 331
CfoI GCGC 2 cut(s) 698, 769
Cfr13I GGNCC 3 cut(s) 557, 642, 881
Csp6I GTAC 4 cut(s) 113, 500, 710, 727
CviAII CATG 9 cut(s) 155, 167, 200, 332, 479, 551, 603, 730, 826
CviQI GTAC 4 cut(s) 113, 500, 710, 727
DdeI CTNAG 3 cut(s) 51, 351, 657
DpnI GATC 5 cut(s) 12, 171, 570, 585, 684
DpnII GATC 5 cut(s) 10, 169, 568, 583, 682
DriI GACNNNNNGTC 1 cut(s) 195
EaeI YGGCCR 2 cut(s) 37, 157
Eam1104I CTCTTC 1 cut(s) 855
Eam1105I GACNNNNNGTC 1 cut(s) 195
EarI CTCTTC 1 cut(s) 855
Eco130I CCWWGG 3 cut(s) 24, 154, 884
Eco31I GGTCTC 2 cut(s) 203, 725
Eco32I GATATC 1 cut(s) 151
Eco47I GGWCC 2 cut(s) 557, 642
Eco57I CTGAAG 1 cut(s) 609
Eco72I CACGTG 1 cut(s) 620
Eco88I CYCGRG 1 cut(s) 206
Eco91I GGTNACC 1 cut(s) 649
EcoO109I RGGNCCY 1 cut(s) 557
EcoO65I GGTNACC 1 cut(s) 649
EcoRII CCWGG 1 cut(s) 644
EcoRV GATATC 1 cut(s) 151
EcoT14I CCWWGG 3 cut(s) 24, 154, 884
ErhI CCWWGG 3 cut(s) 24, 154, 884
FaeI CATG 9 cut(s) 158, 170, 203, 335, 482, 554, 606, 733, 829
FalI AAGNNNNNCTT 2 cut(s) 78, 110
FatI CATG 9 cut(s) 154, 166, 199, 331, 478, 550, 602, 729, 825
FblI GTMKAC 1 cut(s) 340
FokI GGATG 2 cut(s) 285, 434
FspBI CTAG 1 cut(s) 686
GlaI GCGC 2 cut(s) 697, 768
HaeIII GGCC 4 cut(s) 39, 159, 486, 883
HapII CCGG 1 cut(s) 192
HhaI GCGC 2 cut(s) 698, 769
Hin1II CATG 9 cut(s) 158, 170, 203, 335, 482, 554, 606, 733, 829
Hin6I GCGC 2 cut(s) 696, 767
HinP1I GCGC 2 cut(s) 696, 767
HincII GTYRAC 1 cut(s) 124
HindII GTYRAC 1 cut(s) 124
HinfI GANTC 1 cut(s) 104
HpaII CCGG 1 cut(s) 192
HphI GGTGA 5 cut(s) 127, 158, 262, 483, 692
Hpy166II GTNNAC 3 cut(s) 124, 341, 617
Hpy188I TCNGA 1 cut(s) 52
Hpy188III TCNNGA 7 cut(s) 167, 187, 206, 260, 332, 587, 680
Hpy8I GTNNAC 3 cut(s) 124, 341, 617
HpyAV CCTTC 3 cut(s) 548, 571, 710
HpyCH4III ACNGT 6 cut(s) 128, 139, 257, 466, 757, 785
HpyCH4IV ACGT 2 cut(s) 81, 619
HpyCH4V TGCA 1 cut(s) 417
HpyF3I CTNAG 3 cut(s) 51, 351, 657
HpySE526I ACGT 2 cut(s) 81, 619
Hsp92II CATG 9 cut(s) 158, 170, 203, 335, 482, 554, 606, 733, 829
HspAI GCGC 2 cut(s) 696, 767
Kzo9I GATC 5 cut(s) 10, 169, 568, 583, 682
LmnI GCTCC 1 cut(s) 623
MaeI CTAG 1 cut(s) 686
MaeII ACGT 2 cut(s) 81, 619
MaeIII GTNAC 4 cut(s) 133, 248, 649, 751
MalI GATC 5 cut(s) 12, 171, 570, 585, 684
MbiI CCGCTC 1 cut(s) 532
MboI GATC 5 cut(s) 10, 169, 568, 583, 682
MboII GAAGA 3 cut(s) 602, 838, 872
MfeI CAATTG 1 cut(s) 507
MlsI TGGCCA 1 cut(s) 159
MluCI AATT 5 cut(s) 90, 214, 507, 535, 772
MluNI TGGCCA 1 cut(s) 159
MnlI CCTC 5 cut(s) 46, 94, 188, 239, 872
Mox20I TGGCCA 1 cut(s) 159
MroXI GAANNNNTTC 2 cut(s) 182, 845
MscI TGGCCA 1 cut(s) 159
MseI TTAA 4 cut(s) 30, 288, 663, 672
MslI CAYNNNNRTG 1 cut(s) 224
Msp20I TGGCCA 1 cut(s) 159
MspI CCGG 1 cut(s) 192
MspR9I CCNGG 1 cut(s) 646
MunI CAATTG 1 cut(s) 507
Mva1269I GAATGC 1 cut(s) 380
MvaI CCWGG 1 cut(s) 646
MvnI CGCG 1 cut(s) 696
NcoI CCATGG 1 cut(s) 154
NdeII GATC 5 cut(s) 10, 169, 568, 583, 682
NlaIII CATG 9 cut(s) 158, 170, 203, 335, 482, 554, 606, 733, 829
NlaIV GGNNCC 2 cut(s) 559, 643
NmuCI GTSAC 1 cut(s) 133
NspI RCATGY 1 cut(s) 733
PagI TCATGA 2 cut(s) 166, 331
PciI ACATGT 1 cut(s) 729
PctI GAATGC 1 cut(s) 380
PdmI GAANNNNTTC 2 cut(s) 182, 845
PfeI GAWTC 1 cut(s) 104
PmaCI CACGTG 1 cut(s) 620
PmlI CACGTG 1 cut(s) 620
Ppu21I YACGTR 2 cut(s) 82, 620
PpuMI RGGWCCY 1 cut(s) 557
PscI ACATGT 1 cut(s) 729
Psp5II RGGWCCY 1 cut(s) 557
Psp6I CCWGG 1 cut(s) 644
PspCI CACGTG 1 cut(s) 620
PspEI GGTNACC 1 cut(s) 649
PspGI CCWGG 1 cut(s) 644
PspN4I GGNNCC 2 cut(s) 559, 643
PspPI GGNCC 3 cut(s) 557, 642, 881
PspPPI RGGWCCY 1 cut(s) 557
RsaI GTAC 4 cut(s) 114, 501, 711, 728
RsaNI GTAC 4 cut(s) 113, 500, 710, 727
RseI CAYNNNNRTG 1 cut(s) 224
SaqAI TTAA 4 cut(s) 30, 288, 663, 672
Sau3AI GATC 5 cut(s) 10, 169, 568, 583, 682
Sau96I GGNCC 3 cut(s) 557, 642, 881
ScrFI CCNGG 1 cut(s) 646
SinI GGWCC 2 cut(s) 557, 642
SmiMI CAYNNNNRTG 1 cut(s) 224
SmlI CTYRAG 1 cut(s) 722
SmoI CTYRAG 1 cut(s) 722
Sse9I AATT 5 cut(s) 90, 214, 507, 535, 772
SsiI CCGC 2 cut(s) 532, 548
SspMI CTAG 1 cut(s) 686
StyD4I CCNGG 1 cut(s) 644
StyI CCWWGG 3 cut(s) 24, 154, 884
TaaI ACNGT 6 cut(s) 128, 139, 257, 466, 757, 785
TaiI ACGT 2 cut(s) 84, 622
TasI AATT 5 cut(s) 90, 214, 507, 535, 772
TatI WGTACW 3 cut(s) 112, 709, 726
TfiI GAWTC 1 cut(s) 104
Tru1I TTAA 4 cut(s) 30, 288, 663, 672
Tru9I TTAA 4 cut(s) 30, 288, 663, 672
TscAI CASTG 2 cut(s) 469, 661
TseFI GTSAC 1 cut(s) 133
Tsp45I GTSAC 1 cut(s) 133
TspDTI ATGAA 5 cut(s) 155, 191, 348, 467, 567
TspGWI ACGGA 3 cut(s) 434, 517, 866
TspRI CASTG 2 cut(s) 469, 661
VpaK11BI GGWCC 2 cut(s) 557, 642
XapI RAATTY 1 cut(s) 90
XceI RCATGY 1 cut(s) 733
XcmI CCANNNNNNNNNTGG 1 cut(s) 386
XmiI GTMKAC 1 cut(s) 340
XmnI GAANNNNTTC 2 cut(s) 182, 845
XspI CTAG 1 cut(s) 686
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.