AT1G61350

Armadillo beta-catenin repeat family protein

Basic Information

Type: gene
Biological Identity
arabidopsis_thaliana
1
Physical Location & Seq
Forward (+)
22633774 .. 22636101
2328 bp
Loading structure...
UTR
Exon/CDS
Intron
AT1G61350.1

Sequence Viewer

Length: 1722 bp
ATGGGTGAAGAAGCTTGTGAGGAATCATCAAAAGCAAGCATAGAGAAAGCAATCGAAGCAATATCTTCATTGATTTCACTCTCTCACTCAATCAAATCCTTCAACATCAAATGGCAACTCATAAGAACCAAACTCCAAGAGCTTTACTCTGGTCTCGATTCTCTCCGAAATCTCAATTCTGGATTCGACCCATCTCTCTCAAGCTTAATCTCCGCCATTCTAATCTCTCTCAAAGACACTTACGATCTCGCTACTCGCTGCGTTAACGTCTCCTTCAGTGGTAAGCTTCTGATGCAAAGCGATTTAGATGTTATGGCGGGGAAATTCGATGGACATACGAGGAATCTATCTCGGATTTACTCAGCTGGGATTCTAAGTCATGGATTTGCGATCGTTGTGTTGAAGCCTAATGGTAATGCTTGTAAAGATGACATGAGGTTTTACATTAGGGATTTGTTAACGAGAATGAAGATTGGAGATCTGGAGATGAAGAAACAAGCTTTGGTTAAGCTGAATGAAGCTATGGAGGAAGATGATAGATATGTTAAGATTCTGATTGAGATTAGTGATATGGTTAATGTTCTTGTTGGGTTTCTTGATTCTGAGATTGGGATTCAAGAAGAATCTGCCAAAGCTGTGTTTTTTATATCTGGGTTTGGTTCTTATAGGGATGTTTTGATCAGATCAGGTGTGATTGGTCCTTTGGTTAGGGTTCTTGAGAATGGGAATGGTGTTGGTAGAGAAGCGTCTGCAAGGTGTTTGATGAAATTAACTGAGAATTCTGAGAATGCTTGGTCTGTTTCTGCTCATGGAGGTGTTTCAGCTTTGTTGAAGATTTGTTCTTGTAGTGATTTTGGTGGTGAATTGATTGGTACTTCGTGTGGTGTGTTGAGAAATCTCGTTGGTGTTGAAGAGATCAAGAGGTTTATGATTGAAGAAGATCATACTGTTGCTACTTTCATCAAGCTTATTGGATCAAAGGAGGAGATTGTTCAGGTAAATTCTATTGATTTACTGTTGAGTATGTGTTGTAAAGACGAACAAACCCGGGACATCTTGGTTAGAGAAGGAGGAATTCAGGAGCTAGTGAGTGTGTTATCAGATCCCAATTCGTTGTCTTCTTCGAAATCTAAGGAGATAGCATTAAGGGCGATTGATAACTTATGTTTCGGGTCTGCGGGTTGTTTGAATGCATTGATGGGTTGCAAATTCTTGGATCATTTGCTGAATCTGCTAAGAAATGGGGAGATTTCTGTTCAAGAATCAGCCTTGAAGGTCACATCTAGGCTATGTAGTTTACAAGAAGAGGTTAAGAGGATAATGGGAGAGGCGGGTTTTATGCCCGAGCTAGTTAAATTTCTCGACGCCAAATCGATAGATGTACGAGAAATGGCGAGCGTGGCACTGTACTGTTTGATCTCGGTTCCAAGGAACAGGAAGAAGTTTGCACAAGACGACTTTAACATTAGCTACATTCTCCAGTTGCTAGACCATGAAGATGGGAGCAATGTGAGCAGCGATTCAGGTAACACAAAGTTTTTGATATCGATATTGATGTCTTTAACGAGCTGCAATAGCGCGAGAAGAAAGATTGCGAGTTCAGGGTATTTGAAAAGCATAGAGAAGCTAGCAGAAACTGAAGGTTCAGATGCTAAGAAACTTGTGAAGAAGCTATCAATGAACAGATTCCGCAGCATACTCAGTGGTATTTGGCATTCCTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families

Protein Analysis

573

Amino Acids

63.02

Weight (kDa)

6.03

Isoelectric Point (pI)

42.47

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
DUF7032 PF23005 16 - 124 3.9e-32 Domain of unknown function (DUF7032)
ARM_ARMC5 PF24768 189 - 392 2.9e-09 ARMC5
ARM_PUB PF25598 248 - 454 2.3e-11 Plant U-box protein ARM repeat region
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0012984)

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccII CGCG 1 cut(s) 1580
AciI CCGC 5 cut(s) 213, 317, 1178, 1331, 1690
AclWI GGATC 3 cut(s) 982, 1097, 1224
AcsI RAATTY 6 cut(s) 323, 778, 1000, 1074, 1208, 1355
AcuI CTGAAG 2 cut(s) 259, 1659
AcyI GRCGYC 1 cut(s) 1365
AfaI GTAC 3 cut(s) 874, 1383, 1409
AjuI GAANNNNNNNTTGG 2 cut(s) 485, 517
Alw26I GTCTC 2 cut(s) 158, 274
AlwI GGATC 3 cut(s) 982, 1097, 1224
AlwNI CAGNNNCTG 1 cut(s) 1637
Ama87I CYCGRG 2 cut(s) 1047, 1343
ApeKI GCWGC 4 cut(s) 258, 1515, 1569, 1692
ApoI RAATTY 6 cut(s) 323, 778, 1000, 1074, 1208, 1355
Asp700I GAANNNNTTC 1 cut(s) 1685
AspLEI GCGC 1 cut(s) 1580
AspS9I GGNCC 1 cut(s) 698
AsuC2I CCSGG 2 cut(s) 1048, 1049
AsuHPI GGTGA 2 cut(s) 17, 872
AsuII TTCGAA 1 cut(s) 1124
AsuNHI GCTAGC 1 cut(s) 1627
AvaI CYCGRG 2 cut(s) 1047, 1343
AvaII GGWCC 1 cut(s) 698
BbsI GAAGAC 1 cut(s) 1110
BbvI GCAGC 4 cut(s) 245, 1527, 1556, 1704
BccI CCATC 4 cut(s) 199, 323, 1192, 1493
BclI TGATCA 1 cut(s) 678
BcnI CCSGG 2 cut(s) 1048, 1049
BcoDI GTCTC 2 cut(s) 158, 274
BfaI CTAG 5 cut(s) 1085, 1284, 1349, 1487, 1628
BglII AGATCT 1 cut(s) 478
BisI GCNGC 4 cut(s) 259, 1516, 1570, 1693
BlsI GCNGC 4 cut(s) 260, 1517, 1571, 1694
Bme1390I CCNGG 2 cut(s) 1048, 1049
Bme18I GGWCC 1 cut(s) 698
BmeT110I CYCGRG 2 cut(s) 1047, 1343
BmgT120I GGNCC 1 cut(s) 698
BmiI GGNNCC 1 cut(s) 1425
BmrFI CCNGG 2 cut(s) 1048, 1049
BmsI GCATC 2 cut(s) 282, 1639
BmtI GCTAGC 1 cut(s) 1631
BpiI GAAGAC 1 cut(s) 1110
BplI GAGNNNNNCTC 2 cut(s) 131, 163
BpmI CTGGAG 2 cut(s) 503, 1463
Bpu14I TTCGAA 1 cut(s) 1124
BpuEI CTTGAG 2 cut(s) 184, 737
BpuMI CCSGG 2 cut(s) 1048, 1049
Bsa29I ATCGAT 2 cut(s) 1373, 1547
BsaHI GRCGYC 1 cut(s) 1365
BsaI GGTCTC 1 cut(s) 158
BsaJI CCNNGG 2 cut(s) 1047, 1427
Bse1I ACTGG 1 cut(s) 1480
Bse3DI GCAATG 1 cut(s) 1513
BseCI ATCGAT 2 cut(s) 1373, 1547
BseDI CCNNGG 2 cut(s) 1047, 1427
BseGI GGATG 1 cut(s) 676
BseMI GCAATG 1 cut(s) 1513
BseMII CTCAG 5 cut(s) 375, 594, 765, 774, 1714
BseNI ACTGG 1 cut(s) 1480
BseRI GAGGAG 1 cut(s) 998
BseXI GCAGC 4 cut(s) 245, 1527, 1556, 1704
BseYI CCCAGC 1 cut(s) 365
Bsh1236I CGCG 1 cut(s) 1580
Bsh1285I CGRYCG 1 cut(s) 393
BshVI ATCGAT 2 cut(s) 1373, 1547
BsiEI CGRYCG 1 cut(s) 393
BsiHKCI CYCGRG 2 cut(s) 1047, 1343
BsiSI CCGG 1 cut(s) 1048
BslFI GGGAC 1 cut(s) 1064
BsmAI GTCTC 2 cut(s) 158, 274
BsmBI CGTCTC 1 cut(s) 274
BsmFI GGGAC 1 cut(s) 1064
BsmI GAATGC 3 cut(s) 793, 1195, 1714
Bso31I GGTCTC 1 cut(s) 158
BsoBI CYCGRG 2 cut(s) 1047, 1343
Bsp119I TTCGAA 1 cut(s) 1124
BspACI CCGC 5 cut(s) 213, 317, 1178, 1331, 1690
BspCNI CTCAG 5 cut(s) 374, 595, 766, 775, 1713
BspDI ATCGAT 2 cut(s) 1373, 1547
BspFNI CGCG 1 cut(s) 1580
BspLI GGNNCC 1 cut(s) 1425
BspOI GCTAGC 1 cut(s) 1631
BspPI GGATC 3 cut(s) 982, 1097, 1224
BspT104I TTCGAA 1 cut(s) 1124
BspTNI GGTCTC 1 cut(s) 158
BsrDI GCAATG 1 cut(s) 1513
BsrI ACTGG 1 cut(s) 1480
BssECI CCNNGG 2 cut(s) 1047, 1427
BssNI GRCGYC 1 cut(s) 1365
BssT1I CCWWGG 1 cut(s) 1427
Bst4CI ACNGT 4 cut(s) 949, 1017, 1407, 1412
Bst6I CTCTTC 2 cut(s) 906, 1299
BstACI GRCGYC 1 cut(s) 1365
BstBI TTCGAA 1 cut(s) 1124
BstC8I GCNNGC 3 cut(s) 37, 1396, 1629
BstDEI CTNAG 9 cut(s) 361, 374, 603, 774, 783, 1131, 1235, 1653, 1700
BstF5I GGATG 1 cut(s) 676
BstFNI CGCG 1 cut(s) 1580
BstHHI GCGC 1 cut(s) 1580
BstMAI GTCTC 2 cut(s) 158, 274
BstMCI CGRYCG 1 cut(s) 393
BstMWI GCNNNNNNNGC 7 cut(s) 56, 292, 1148, 1231, 1400, 1512, 1575
BstSCI CCNGG 2 cut(s) 1046, 1047
BstUI CGCG 1 cut(s) 1580
BstV1I GCAGC 4 cut(s) 245, 1527, 1556, 1704
BstV2I GAAGAC 1 cut(s) 1110
BstX2I RGATCY 2 cut(s) 478, 1102
BstXI CCANNNNNNTGG 1 cut(s) 1499
BstYI RGATCY 2 cut(s) 478, 1102
Bsu15I ATCGAT 2 cut(s) 1373, 1547
BsuTUI ATCGAT 2 cut(s) 1373, 1547
BtsCI GGATG 1 cut(s) 676
BtsIMutI CAGTG 3 cut(s) 283, 1403, 1708
Cac8I GCNNGC 3 cut(s) 37, 1396, 1629
CaiI CAGNNNCTG 1 cut(s) 1637
CfoI GCGC 1 cut(s) 1580
Cfr13I GGNCC 1 cut(s) 698
Cfr9I CCCGGG 1 cut(s) 1047
ClaI ATCGAT 2 cut(s) 1373, 1547
CseI GACGC 2 cut(s) 735, 1373
Csp6I GTAC 3 cut(s) 873, 1382, 1408
CviAII CATG 4 cut(s) 380, 433, 809, 1493
CviQI GTAC 3 cut(s) 873, 1382, 1408
DdeI CTNAG 9 cut(s) 361, 374, 603, 774, 783, 1131, 1235, 1653, 1700
Eam1104I CTCTTC 2 cut(s) 906, 1299
EarI CTCTTC 2 cut(s) 906, 1299
EciI GGCGGA 1 cut(s) 202
Eco130I CCWWGG 1 cut(s) 1427
Eco31I GGTCTC 1 cut(s) 158
Eco32I GATATC 1 cut(s) 1545
Eco47I GGWCC 1 cut(s) 698
Eco57I CTGAAG 2 cut(s) 259, 1659
Eco88I CYCGRG 2 cut(s) 1047, 1343
EcoRI GAATTC 2 cut(s) 778, 1074
EcoRV GATATC 1 cut(s) 1545
EcoT14I CCWWGG 1 cut(s) 1427
EcoT22I ATGCAT 1 cut(s) 1195
ErhI CCWWGG 1 cut(s) 1427
Esp3I CGTCTC 1 cut(s) 274
FaeI CATG 4 cut(s) 383, 436, 812, 1496
FaqI GGGAC 1 cut(s) 1064
FatI CATG 4 cut(s) 379, 432, 808, 1492
FauI CCCGC 3 cut(s) 310, 1171, 1324
FbaI TGATCA 1 cut(s) 678
Fnu4HI GCNGC 4 cut(s) 259, 1516, 1570, 1693
FokI GGATG 1 cut(s) 683
Fsp4HI GCNGC 4 cut(s) 259, 1516, 1570, 1693
FspBI CTAG 5 cut(s) 1085, 1284, 1349, 1487, 1628
GlaI GCGC 1 cut(s) 1579
GluI GCNGC 4 cut(s) 259, 1516, 1570, 1693
GsaI CCCAGC 1 cut(s) 369
GsuI CTGGAG 2 cut(s) 503, 1463
HapII CCGG 1 cut(s) 1048
HgaI GACGC 2 cut(s) 735, 1373
HhaI GCGC 1 cut(s) 1580
Hin1I GRCGYC 1 cut(s) 1365
Hin1II CATG 4 cut(s) 383, 436, 812, 1496
Hin6I GCGC 1 cut(s) 1578
HinP1I GCGC 1 cut(s) 1578
HincII GTYRAC 2 cut(s) 265, 459
HindII GTYRAC 2 cut(s) 265, 459
HindIII AAGCTT 5 cut(s) 12, 202, 284, 498, 965
HpaI GTTAAC 2 cut(s) 265, 459
HpaII CCGG 1 cut(s) 1048
HphI GGTGA 2 cut(s) 17, 872
Hpy166II GTNNAC 3 cut(s) 265, 459, 1298
Hpy188I TCNGA 9 cut(s) 167, 291, 354, 555, 604, 683, 784, 1102, 1648
Hpy8I GTNNAC 3 cut(s) 265, 459, 1298
Hpy99I CGWCG 1 cut(s) 1367
HpyAV CCTTC 5 cut(s) 109, 283, 1061, 1267, 1634
HpyCH4III ACNGT 4 cut(s) 949, 1017, 1407, 1412
HpyCH4IV ACGT 1 cut(s) 267
HpyCH4V TGCA 6 cut(s) 295, 752, 1193, 1206, 1448, 1572
HpyF10VI GCNNNNNNNGC 7 cut(s) 56, 292, 1148, 1231, 1400, 1512, 1575
HpyF3I CTNAG 9 cut(s) 361, 374, 603, 774, 783, 1131, 1235, 1653, 1700
HpySE526I ACGT 1 cut(s) 267
Hsp92I GRCGYC 1 cut(s) 1365
Hsp92II CATG 4 cut(s) 383, 436, 812, 1496
HspAI GCGC 1 cut(s) 1578
Ksp22I TGATCA 1 cut(s) 678
KspAI GTTAAC 2 cut(s) 265, 459
LmnI GCTCC 2 cut(s) 1081, 1503
Lsp1109I GCAGC 4 cut(s) 245, 1527, 1556, 1704
LweI GCATC 2 cut(s) 282, 1639
MaeI CTAG 5 cut(s) 1085, 1284, 1349, 1487, 1628
MaeII ACGT 1 cut(s) 267
MaeIII GTNAC 2 cut(s) 1276, 1526
MflI RGATCY 2 cut(s) 478, 1102
Mph1103I ATGCAT 1 cut(s) 1195
MroXI GAANNNNTTC 1 cut(s) 1685
MslI CAYNNNNRTG 2 cut(s) 813, 1497
MspA1I CMGCKG 1 cut(s) 365
MspI CCGG 1 cut(s) 1048
MspR9I CCNGG 2 cut(s) 1048, 1049
Mva1269I GAATGC 3 cut(s) 793, 1195, 1714
MvnI CGCG 1 cut(s) 1580
MwoI GCNNNNNNNGC 7 cut(s) 56, 292, 1148, 1231, 1400, 1512, 1575
NciI CCSGG 2 cut(s) 1048, 1049
NheI GCTAGC 1 cut(s) 1627
NlaIII CATG 4 cut(s) 383, 436, 812, 1496
NlaIV GGNNCC 1 cut(s) 1425
NmuCI GTSAC 1 cut(s) 1276
NsiI ATGCAT 1 cut(s) 1195
NspV TTCGAA 1 cut(s) 1124
PctI GAATGC 3 cut(s) 793, 1195, 1714
PdmI GAANNNNTTC 1 cut(s) 1685
PkrI GCNGC 4 cut(s) 260, 1517, 1571, 1694
Ple19I CGATCG 1 cut(s) 393
PspFI CCCAGC 1 cut(s) 365
PspN4I GGNNCC 1 cut(s) 1425
PspPI GGNCC 1 cut(s) 698
PstNI CAGNNNCTG 1 cut(s) 1637
PsuI RGATCY 2 cut(s) 478, 1102
PvuI CGATCG 1 cut(s) 393
PvuII CAGCTG 1 cut(s) 365
RsaI GTAC 3 cut(s) 874, 1383, 1409
RsaNI GTAC 3 cut(s) 873, 1382, 1408
RseI CAYNNNNRTG 2 cut(s) 813, 1497
SatI GCNGC 4 cut(s) 259, 1516, 1570, 1693
Sau96I GGNCC 1 cut(s) 698
ScrFI CCNGG 2 cut(s) 1048, 1049
SfaNI GCATC 2 cut(s) 282, 1639
SfuI TTCGAA 1 cut(s) 1124
SinI GGWCC 1 cut(s) 698
SmaI CCCGGG 1 cut(s) 1049
SmiMI CAYNNNNRTG 2 cut(s) 813, 1497
SmlI CTYRAG 2 cut(s) 199, 716
SmoI CTYRAG 2 cut(s) 199, 716
SsiI CCGC 5 cut(s) 213, 317, 1178, 1331, 1690
SspMI CTAG 5 cut(s) 1085, 1284, 1349, 1487, 1628
StyD4I CCNGG 2 cut(s) 1046, 1047
StyI CCWWGG 1 cut(s) 1427
TaaI ACNGT 4 cut(s) 949, 1017, 1407, 1412
TaiI ACGT 1 cut(s) 270
TaqI TCGA 8 cut(s) 54, 156, 186, 327, 1124, 1362, 1373, 1547
TatI WGTACW 1 cut(s) 1407
TscAI CASTG 3 cut(s) 283, 1410, 1708
TseFI GTSAC 1 cut(s) 1276
TseI GCWGC 4 cut(s) 258, 1515, 1569, 1692
Tsp45I GTSAC 1 cut(s) 1276
TspDTI ATGAA 8 cut(s) 57, 482, 503, 531, 779, 949, 1509, 1694
TspMI CCCGGG 1 cut(s) 1047
TspRI CASTG 3 cut(s) 283, 1410, 1708
VpaK11BI GGWCC 1 cut(s) 698
XapI RAATTY 6 cut(s) 323, 778, 1000, 1074, 1208, 1355
XmaI CCCGGG 1 cut(s) 1047
XmnI GAANNNNTTC 1 cut(s) 1685
XspI CTAG 5 cut(s) 1085, 1284, 1349, 1487, 1628
Zsp2I ATGCAT 1 cut(s) 1195
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.