AT1G61800

Glucose-6-phosphate phosphate translocator 2

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
arabidopsis_thaliana
1
OG0015018
Physical Location & Seq
Forward (+)
22824414 .. 22826902
2489 bp
Loading structure...
UTR
Exon/CDS
Intron
AT1G61800.2

Sequence Viewer

Length: 1167 bp
ATGCTTTCTTCAATCAAACCATCTTCGTCTTCCTTCTCCACCGCTATCTCCGGCAGCGTAAGGCGGTCAATTCCTACAAAGCTCAAGTTTTCTCCTTTACTCATCATCAAAAACTGCCATAACCAAAGCTTTAACGCTAATGTTGTCTCCCATCAAAAGCCTCTACACATTTCATCTGCTTCGAATTTCAAGCGTGAGGTCAAAGTCGAAGCTTACGAGGCCGATCGTTCCCGTCCACTGGACATCAACATCGAGCTTCCCGATGAACAATCCGCGCAGAAACTGAAAATCGGAATCTACTTCGCAACTTGGTGGGCACTTAACGTTGTCTTCAACATCTACAACAAGAAAGTCCTCAATGCTTTTCCTTACCCGTGGCTTACTTCGACGTTGTCTCTCGCTTGTGGTTCTTTGATGATGCTTGTCTCTTGGGCTACTAGAATCGCAGATGCTCCTAAAACTGATCTCGAGTTCTGGAAAACTCTGTTCCCGGTCGCTGTAGCACACACGATAGGACACGTTGCAGCAACAGTGAGTATGTCAAAAGTAGCAGTTTCCTTCACACACATCATTAAAAGTGGTGAACCAGCTTTCAGTGTCTTAGTCTCAAGATTCTTCATGGGAGAGACTTTCCCTCTTCCTGTCTATCTCTCTCTCTTACCAATCATCGGAGGCTGCGCTCTCGCGGCCATCACCGAGCTTAACTTCAACATCACTGGGTTTATGGGGGCAATGATATCGAATTTGGCATTTGTGTTCCGGAATATCTTTTCGAAGAAAGGGATGAAAGGGAAGTCAGTGAGCGGAATGAACTACTACGCTTGCTTATCGATGATGTCTCTTGTGATCCTCACTCCATTTTCTATTGCCGTGGAAGGTCCTCAAATGTGGGCTGCTGGTTGGCAAAATGCGGTTTCTCAAGTCGGACCAAACTTTGTCTGGTGGGTAGTGGCACAAAGTGTGTTTTACCATTTGTACAATCAGGTCTCATACATGTCATTAGACCAGATTTCGCCGTTAACTTTCAGTATCGGTAATACGATGAAGCGGATTTCCGTTATTGTTGCATCGATCATCATTTTCCATACCCCGATTCAACCGGTTAATGCCCTCGGTGCTGCCATTGCGATTTTTGGAACTTTCCTCTACTCACAGGCGAAGCAGTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0000003 GO:0003006 GO:0003674 GO:0005215 GO:0005315 GO:0005342 GO:0005488 GO:0005515 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005773 GO:0005774 GO:0006810 GO:0006811 GO:0006820 GO:0006996 GO:0007033 GO:0007275 GO:0008028 GO:0008150 GO:0008152 GO:0008509 GO:0008514 GO:0008643 GO:0009314 GO:0009416 GO:0009536 GO:0009553 GO:0009555 GO:0009605 GO:0009607 GO:0009624 GO:0009628 GO:0009642 GO:0009643 GO:0009743 GO:0009744 GO:0009746 GO:0009749 GO:0009790 GO:0009791 GO:0009793 GO:0009987 GO:0010033 GO:0010109 GO:0010152 GO:0010154 GO:0015075 GO:0015120 GO:0015144 GO:0015152 GO:0015291 GO:0015318 GO:0015605 GO:0015711 GO:0015712 GO:0015713 GO:0015714 GO:0015717 GO:0015718 GO:0015748 GO:0015760 GO:0015849 GO:0015979 GO:0016020 GO:0016043 GO:0019222 GO:0019904 GO:0021700 GO:0022414 GO:0022804 GO:0022857 GO:0031090 GO:0031323 GO:0032501 GO:0032502 GO:0034219 GO:0034220 GO:0034284 GO:0034285 GO:0034389 GO:0035436 GO:0042221 GO:0042873 GO:0042879 GO:0043207 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044237 GO:0044422 GO:0044424 GO:0044437 GO:0044444 GO:0044446 GO:0044464 GO:0046942 GO:0046943 GO:0048229 GO:0048316 GO:0048608 GO:0048731 GO:0048856 GO:0050789 GO:0050794 GO:0050896 GO:0051179 GO:0051234 GO:0051704 GO:0051707 GO:0055085 GO:0061458 GO:0065007 GO:0071702 GO:0071840 GO:0071917 GO:0080167 GO:0098588 GO:0098656 GO:0098805 GO:1901264 GO:1901505 GO:1901700 GO:1903825 GO:1905039
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
TPT

Protein Analysis

388

Amino Acids

42.75

Weight (kDa)

9.64

Isoelectric Point (pI)

45.8

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
TPT PF03151 95 - 384 1.1e-117 Triose-phosphate Transporter family
EamA PF00892 102 - 229 3.1e-07 EamA-like transporter family
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Orthologous Genes (Group: OG0015018)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G61800 AT1G61800
fragaria_vesca FvH4_3g02500 FvH4_3g02500
malus_domestica MD05G1342400.v1.1 MD10G1316100.v1.1
prunus_persica Prupe.4G024500_v2.0.a1
pyrus_communis pycom10g26830
rosa_chinensis RchiOBHm_Chr5g0003801
rosa_laevigata RLG00000031176
rosa_multiflora Rmu_sc0004212.1_g000010
rosa_roxburghii Rroxscaffold_1G00072190
rosa_samantha Rh5BG032500 Rh5CG036500 Rh5DG032700
rosa_wichuraiana Rw5G003120

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccBSI CCGCTC 1 cut(s) 804
AccII CGCG 2 cut(s) 275, 686
AccIII TCCGGA 1 cut(s) 759
AciI CCGC 7 cut(s) 42, 64, 273, 686, 804, 911, 1048
AclI AACGTT 1 cut(s) 324
AclWI GGATC 1 cut(s) 841
AcoI YGGCCR 1 cut(s) 687
AcsI RAATTY 2 cut(s) 184, 742
AdeI CACNNNGTG 1 cut(s) 959
AfaI GTAC 1 cut(s) 977
AfiI CCNNNNNNNGG 2 cut(s) 238, 668
AflIII ACRYGT 2 cut(s) 517, 993
AgeI ACCGGT 1 cut(s) 1099
AgsI TTSAA 5 cut(s) 12, 190, 334, 709, 1097
AluBI AGCT 6 cut(s) 82, 129, 212, 256, 590, 700
AluI AGCT 6 cut(s) 82, 129, 212, 256, 590, 700
Alw26I GTCTC 7 cut(s) 151, 399, 430, 610, 620, 843, 991
AlwI GGATC 1 cut(s) 841
AlwNI CAGNNNCTG 1 cut(s) 283
Ama87I CYCGRG 1 cut(s) 467
Aor13HI TCCGGA 1 cut(s) 759
AoxI GGCC 2 cut(s) 219, 687
ApeKI GCWGC 5 cut(s) 54, 524, 675, 893, 1118
ApoI RAATTY 2 cut(s) 184, 742
AsiGI ACCGGT 1 cut(s) 1099
AspLEI GCGC 2 cut(s) 277, 680
AspS9I GGNCC 2 cut(s) 878, 926
AsuC2I CCSGG 1 cut(s) 491
AsuHPI GGTGA 2 cut(s) 593, 685
AsuII TTCGAA 2 cut(s) 182, 773
AvaI CYCGRG 1 cut(s) 467
AvaII GGWCC 2 cut(s) 878, 926
BaeGI GKGCMC 1 cut(s) 319
BbsI GAAGAC 2 cut(s) 21, 322
BbvI GCAGC 5 cut(s) 66, 536, 662, 880, 1105
BccI CCATC 3 cut(s) 28, 159, 698
BceAI ACGGC 2 cut(s) 854, 1000
BcgI CGANNNNNNTGC 2 cut(s) 720, 754
BcnI CCSGG 1 cut(s) 491
BcoDI GTCTC 7 cut(s) 151, 399, 430, 610, 620, 843, 991
BfaI CTAG 1 cut(s) 438
BfmI CTRYAG 1 cut(s) 498
BisI GCNGC 6 cut(s) 55, 525, 676, 687, 894, 1119
BlsI GCNGC 6 cut(s) 56, 526, 677, 688, 895, 1120
Bme1390I CCNGG 1 cut(s) 491
Bme18I GGWCC 2 cut(s) 878, 926
BmeT110I CYCGRG 1 cut(s) 467
BmgT120I GGNCC 2 cut(s) 878, 926
BmrFI CCNGG 1 cut(s) 491
BmrI ACTGGG 1 cut(s) 726
BmsI GCATC 3 cut(s) 408, 439, 1076
BmuI ACTGGG 1 cut(s) 726
BpiI GAAGAC 2 cut(s) 21, 322
Bpu14I TTCGAA 2 cut(s) 182, 773
BpuEI CTTGAG 3 cut(s) 68, 592, 903
BpuMI CCSGG 1 cut(s) 491
Bsa29I ATCGAT 2 cut(s) 830, 1070
BsaI GGTCTC 1 cut(s) 991
BsaJI CCNNGG 3 cut(s) 374, 870, 1111
BsaWI WCCGGW 2 cut(s) 759, 1099
Bsc4I CCNNNNNNNGG 2 cut(s) 238, 668
Bse118I RCCGGY 1 cut(s) 1099
Bse1I ACTGG 2 cut(s) 243, 721
Bse3DI GCAATG 2 cut(s) 738, 1122
BseAI TCCGGA 1 cut(s) 759
BseCI ATCGAT 2 cut(s) 830, 1070
BseDI CCNNGG 3 cut(s) 374, 870, 1111
BseGI GGATG 1 cut(s) 789
BseLI CCNNNNNNNGG 2 cut(s) 238, 668
BseMI GCAATG 2 cut(s) 738, 1122
BseNI ACTGG 2 cut(s) 243, 721
BseSI GKGCMC 1 cut(s) 319
BseXI GCAGC 5 cut(s) 66, 536, 662, 880, 1105
Bsh1236I CGCG 2 cut(s) 275, 686
Bsh1285I CGRYCG 2 cut(s) 226, 495
BshFI GGCC 2 cut(s) 221, 689
BshTI ACCGGT 1 cut(s) 1099
BshVI ATCGAT 2 cut(s) 830, 1070
BsiEI CGRYCG 2 cut(s) 226, 495
BsiHKCI CYCGRG 1 cut(s) 467
BsiSI CCGG 4 cut(s) 51, 491, 760, 1100
BslI CCNNNNNNNGG 2 cut(s) 238, 668
BsmAI GTCTC 7 cut(s) 151, 399, 430, 610, 620, 843, 991
BsnI GGCC 2 cut(s) 221, 689
Bso31I GGTCTC 1 cut(s) 991
BsoBI CYCGRG 1 cut(s) 467
Bsp119I TTCGAA 2 cut(s) 182, 773
Bsp1286I GDGCHC 1 cut(s) 319
Bsp13I TCCGGA 1 cut(s) 759
Bsp1407I TGTACA 1 cut(s) 975
Bsp143I GATC 4 cut(s) 223, 463, 846, 1071
BspACI CCGC 7 cut(s) 42, 64, 273, 686, 804, 911, 1048
BspANI GGCC 2 cut(s) 221, 689
BspDI ATCGAT 2 cut(s) 830, 1070
BspEI TCCGGA 1 cut(s) 759
BspFNI CGCG 2 cut(s) 275, 686
BspPI GGATC 1 cut(s) 841
BspT104I TTCGAA 2 cut(s) 182, 773
BspTNI GGTCTC 1 cut(s) 991
BsrBI CCGCTC 1 cut(s) 804
BsrDI GCAATG 2 cut(s) 738, 1122
BsrFI RCCGGY 1 cut(s) 1099
BsrGI TGTACA 1 cut(s) 975
BsrI ACTGG 2 cut(s) 243, 721
BssAI RCCGGY 1 cut(s) 1099
BssECI CCNNGG 3 cut(s) 374, 870, 1111
BssMI GATC 4 cut(s) 223, 463, 846, 1071
Bst4CI ACNGT 1 cut(s) 532
Bst6I CTCTTC 1 cut(s) 642
BstAUI TGTACA 1 cut(s) 975
BstBI TTCGAA 2 cut(s) 182, 773
BstC8I GCNNGC 1 cut(s) 823
BstDEI CTNAG 1 cut(s) 601
BstDSI CCRYGG 2 cut(s) 374, 870
BstF5I GGATG 1 cut(s) 789
BstFNI CGCG 2 cut(s) 275, 686
BstHHI GCGC 2 cut(s) 277, 680
BstKTI GATC 4 cut(s) 226, 466, 849, 1074
BstMAI GTCTC 7 cut(s) 151, 399, 430, 610, 620, 843, 991
BstMBI GATC 4 cut(s) 223, 463, 846, 1071
BstMCI CGRYCG 2 cut(s) 226, 495
BstMWI GCNNNNNNNGC 4 cut(s) 218, 686, 1115, 1124
BstNSI RCATGY 1 cut(s) 997
BstSCI CCNGG 1 cut(s) 489
BstSFI CTRYAG 1 cut(s) 498
BstSLI GKGCMC 1 cut(s) 319
BstUI CGCG 2 cut(s) 275, 686
BstV1I GCAGC 5 cut(s) 66, 536, 662, 880, 1105
BstV2I GAAGAC 2 cut(s) 21, 322
Bsu15I ATCGAT 2 cut(s) 830, 1070
BsuRI GGCC 2 cut(s) 221, 689
BsuTUI ATCGAT 2 cut(s) 830, 1070
BtgI CCRYGG 2 cut(s) 374, 870
BtsCI GGATG 1 cut(s) 789
BtsIMutI CAGTG 5 cut(s) 236, 537, 601, 714, 804
Cac8I GCNNGC 1 cut(s) 823
CaiI CAGNNNCTG 1 cut(s) 283
CfoI GCGC 2 cut(s) 277, 680
Cfr10I RCCGGY 1 cut(s) 1099
Cfr13I GGNCC 2 cut(s) 878, 926
ClaI ATCGAT 2 cut(s) 830, 1070
Csp6I GTAC 1 cut(s) 976
CspAI ACCGGT 1 cut(s) 1099
CviAII CATG 2 cut(s) 619, 994
CviQI GTAC 1 cut(s) 976
DdeI CTNAG 1 cut(s) 601
DpnI GATC 4 cut(s) 225, 465, 848, 1073
DpnII GATC 4 cut(s) 223, 463, 846, 1071
DraIII CACNNNGTG 1 cut(s) 959
EaeI YGGCCR 1 cut(s) 687
Eam1104I CTCTTC 1 cut(s) 642
EarI CTCTTC 1 cut(s) 642
Eco31I GGTCTC 1 cut(s) 991
Eco32I GATATC 1 cut(s) 738
Eco47I GGWCC 2 cut(s) 878, 926
Eco88I CYCGRG 1 cut(s) 467
EcoO109I RGGNCCY 1 cut(s) 878
EcoRV GATATC 1 cut(s) 738
FaeI CATG 2 cut(s) 622, 997
FaiI YATR 7 cut(s) 120, 539, 620, 725, 991, 995, 1086
FatI CATG 2 cut(s) 618, 993
Fnu4HI GCNGC 6 cut(s) 55, 525, 676, 687, 894, 1119
FokI GGATG 1 cut(s) 796
Fsp4HI GCNGC 6 cut(s) 55, 525, 676, 687, 894, 1119
FspBI CTAG 1 cut(s) 438
GlaI GCGC 2 cut(s) 276, 679
GluI GCNGC 6 cut(s) 55, 525, 676, 687, 894, 1119
HaeIII GGCC 2 cut(s) 221, 689
HapII CCGG 4 cut(s) 51, 491, 760, 1100
HhaI GCGC 2 cut(s) 277, 680
Hin1II CATG 2 cut(s) 622, 997
Hin6I GCGC 2 cut(s) 275, 678
HinP1I GCGC 2 cut(s) 275, 678
HincII GTYRAC 1 cut(s) 1020
HindII GTYRAC 1 cut(s) 1020
HindIII AAGCTT 2 cut(s) 127, 210
HinfI GANTC 4 cut(s) 294, 441, 612, 1093
HpaI GTTAAC 1 cut(s) 1020
HpaII CCGG 4 cut(s) 51, 491, 760, 1100
HphI GGTGA 2 cut(s) 593, 685
Hpy166II GTNNAC 3 cut(s) 236, 584, 1020
Hpy188I TCNGA 3 cut(s) 293, 671, 926
Hpy188III TCNNGA 5 cut(s) 260, 467, 475, 609, 760
Hpy8I GTNNAC 3 cut(s) 236, 584, 1020
Hpy99I CGWCG 1 cut(s) 391
HpyAV CCTTC 3 cut(s) 43, 568, 869
HpyCH4III ACNGT 1 cut(s) 532
HpyCH4IV ACGT 3 cut(s) 324, 389, 519
HpyCH4V TGCA 2 cut(s) 524, 1067
HpyF10VI GCNNNNNNNGC 4 cut(s) 218, 686, 1115, 1124
HpyF3I CTNAG 1 cut(s) 601
HpySE526I ACGT 3 cut(s) 324, 389, 519
Hsp92II CATG 2 cut(s) 622, 997
HspAI GCGC 2 cut(s) 275, 678
Kpn2I TCCGGA 1 cut(s) 759
KspAI GTTAAC 1 cut(s) 1020
Kzo9I GATC 4 cut(s) 223, 463, 846, 1071
LmnI GCTCC 1 cut(s) 457
Lsp1109I GCAGC 5 cut(s) 66, 536, 662, 880, 1105
LweI GCATC 3 cut(s) 408, 439, 1076
MaeI CTAG 1 cut(s) 438
MaeII ACGT 3 cut(s) 324, 389, 519
MalI GATC 4 cut(s) 225, 465, 848, 1073
MbiI CCGCTC 1 cut(s) 804
MboI GATC 4 cut(s) 223, 463, 846, 1071
MboII GAAGA 6 cut(s) 15, 21, 322, 607, 629, 787
MhlI GDGCHC 1 cut(s) 319
MluCI AATT 3 cut(s) 69, 184, 742
MmeI TCCRAC 1 cut(s) 904
MroI TCCGGA 1 cut(s) 759
MseI TTAA 6 cut(s) 132, 321, 573, 702, 1019, 1104
MspI CCGG 4 cut(s) 51, 491, 760, 1100
MspR9I CCNGG 1 cut(s) 491
MvnI CGCG 2 cut(s) 275, 686
MwoI GCNNNNNNNGC 4 cut(s) 218, 686, 1115, 1124
NciI CCSGG 1 cut(s) 491
NdeII GATC 4 cut(s) 223, 463, 846, 1071
NlaIII CATG 2 cut(s) 622, 997
NspI RCATGY 1 cut(s) 997
NspV TTCGAA 2 cut(s) 182, 773
PaeR7I CTCGAG 1 cut(s) 467
PciI ACATGT 1 cut(s) 993
PcsI WCGNNNNNNNCGW 2 cut(s) 213, 258
PfeI GAWTC 4 cut(s) 294, 441, 612, 1093
PflFI GACNNNGTC 1 cut(s) 391
PinAI ACCGGT 1 cut(s) 1099
PkrI GCNGC 6 cut(s) 56, 526, 677, 688, 895, 1120
Ple19I CGATCG 1 cut(s) 226
PpuMI RGGWCCY 1 cut(s) 878
PscI ACATGT 1 cut(s) 993
Psp1406I AACGTT 1 cut(s) 324
Psp5II RGGWCCY 1 cut(s) 878
PspPI GGNCC 2 cut(s) 878, 926
PspPPI RGGWCCY 1 cut(s) 878
PstNI CAGNNNCTG 1 cut(s) 283
PsyI GACNNNGTC 1 cut(s) 391
PvuI CGATCG 1 cut(s) 226
RsaI GTAC 1 cut(s) 977
RsaNI GTAC 1 cut(s) 976
SaqAI TTAA 6 cut(s) 132, 321, 573, 702, 1019, 1104
SatI GCNGC 6 cut(s) 55, 525, 676, 687, 894, 1119
Sau3AI GATC 4 cut(s) 223, 463, 846, 1071
Sau96I GGNCC 2 cut(s) 878, 926
ScrFI CCNGG 1 cut(s) 491
SduI GDGCHC 1 cut(s) 319
SfaNI GCATC 3 cut(s) 408, 439, 1076
SfcI CTRYAG 1 cut(s) 498
Sfr274I CTCGAG 1 cut(s) 467
SfuI TTCGAA 2 cut(s) 182, 773
SinI GGWCC 2 cut(s) 878, 926
SlaI CTCGAG 1 cut(s) 467
SmlI CTYRAG 4 cut(s) 83, 467, 607, 918
SmoI CTYRAG 4 cut(s) 83, 467, 607, 918
Sse9I AATT 3 cut(s) 69, 184, 742
SsiI CCGC 7 cut(s) 42, 64, 273, 686, 804, 911, 1048
SspMI CTAG 1 cut(s) 438
StyD4I CCNGG 1 cut(s) 489
TaaI ACNGT 1 cut(s) 532
TaiI ACGT 3 cut(s) 327, 392, 522
TaqI TCGA 9 cut(s) 182, 207, 252, 386, 468, 740, 773, 830, 1070
TasI AATT 3 cut(s) 69, 184, 742
TatI WGTACW 1 cut(s) 975
TauI GCSGC 1 cut(s) 689
TfiI GAWTC 4 cut(s) 294, 441, 612, 1093
Tru1I TTAA 6 cut(s) 132, 321, 573, 702, 1019, 1104
Tru9I TTAA 6 cut(s) 132, 321, 573, 702, 1019, 1104
TscAI CASTG 5 cut(s) 243, 537, 601, 721, 804
TseI GCWGC 5 cut(s) 54, 524, 675, 893, 1118
TspDTI ATGAA 6 cut(s) 162, 279, 607, 800, 824, 1058
TspGWI ACGGA 1 cut(s) 1045
TspRI CASTG 5 cut(s) 243, 537, 601, 721, 804
Tth111I GACNNNGTC 1 cut(s) 391
VpaK11BI GGWCC 2 cut(s) 878, 926
XapI RAATTY 2 cut(s) 184, 742
XceI RCATGY 1 cut(s) 997
XcmI CCANNNNNNNNNTGG 1 cut(s) 936
XhoI CTCGAG 1 cut(s) 467
XspI CTAG 1 cut(s) 438
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.