Rh5DG032700

Glucose-6-phosphate phosphate translocator 2

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr5D
Physical Location & Seq
Reverse (-)
2296569 .. 2299849
3281 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh5DG032700.1

Sequence Viewer

Length: 1266 bp
ATGATCTCTTCGGTTAGGCTCAGAACCCCAACTTTCACGTCGGCACAGTTCTCGAACCAGAAGTGTTGTTTGGGAAAGATAGAGTATTGTTCCCTCCCTAATATTCAGAATGCGAAACAGAGCATCCTCTGTTCCTCCAAGCCGCTTCACATTTCTTCAGCTGAGAGTTTTGCATTGGTGGCCAAGACTCAGAAGCGCAGTTCGACAAAGTGTGAGGTGTATGAGGCAGACAGATCACGCCCGATTGAGATCAACATCGACCTGCCGGACCAGCAGGCTCGGAAGGAGACAGCTCAGACTCTCAAGATTAGTCTTTACTTTGCGACCTGGTGGGCTTTGAATGTTGTGTTCAATATATACAACAAGAAGGTTTTGAATGTGTTCCCATTTCCATGGCTCACATCCACGTTGTCACTCGCAACCGGGTCTCTGATGATGCTCATTTCATGGGCCGTTGGGATTGCTGAAGCCCCCAAAACAGATATGGACTTCTGGAAGACATTGTTTCCAGTTGCAGTGGCGCATTCAATTGGGCATGTAGCAGCGACCGTGAGTATGTCAAAGGTTGCAGTTTCATTCACGCATATCATCAAGAGTGGTGAACCTGCTTTCAGTGTTTTGGTTTCAAGGTTCTTGTTAGGCGAAACTTTTCCCAGTTCGGTTTACCTCTCACTGTTGCCAATTATCGGAGGGTGTGCGCTTGCTGCTGTAACCGAGATCAATTTCAACATGATTGGGTTTATGGGTGCTATGATATCTAATCTGGCATTCGTGTTCCGAAACATATTTTCGAAGAAAGGGATGAAGGGGAAGTCTGTCAGTGGCATGAACTACTATGCTTGTCTGTCTATGTTGTCTCTATTGATCCTGATTCCGTTTGCCATTGCCGTCGAGGGTCCCCAGTTATGGGCAGCTGGATGGAAGACAGCTCTTGCACAGATTGGTCCCAATTTCATATGGTGGTTGGCAGCTCAGAGTATCTTCTATCACTTGTATAATCAGGTTTCATACATGTCACTCGATCAGATTTCTCCCTTAACATTCAGCATCGGGAACACAATGAAGCGTATATCCGTCATAGTTTCCTCCATTATCATTTTTCGCACCCCTGTTCAACCGGTCAATTGCCTTGGAGCAGGTATTGCAATCCTTGGCACCTTCCTCTACTCACAGGTAAATATAAGTTTACTTTCACATTGGTTAAATGACTGTTCAGTATGCAATCTTACATATTTGTTCAGAATCCTGAAATATGTCTGGGGTTAA

Protein Analysis

421

Amino Acids

46.58

Weight (kDa)

9.39

Isoelectric Point (pI)

45.35

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
TPT PF03151 101 - 390 2.4e-115 Triose-phosphate Transporter family
EamA PF00892 109 - 235 2.2e-06 EamA-like transporter family
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0015018)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G61800 AT1G61800
fragaria_vesca FvH4_3g02500 FvH4_3g02500
malus_domestica MD05G1342400.v1.1 MD10G1316100.v1.1
prunus_persica Prupe.4G024500_v2.0.a1
pyrus_communis pycom10g26830
rosa_chinensis RchiOBHm_Chr5g0003801
rosa_laevigata RLG00000031176
rosa_multiflora Rmu_sc0004212.1_g000010
rosa_roxburghii Rroxscaffold_1G00072190
rosa_samantha Rh5BG032500 Rh5CG036500 Rh5DG032700
rosa_wichuraiana Rw5G003120

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc36I ACCTGC 3 cut(s) 270, 613, 1127
AccB1I GGYRCC 1 cut(s) 1154
AciI CCGC 1 cut(s) 143
AclWI GGATC 1 cut(s) 859
AcoI YGGCCR 1 cut(s) 180
AcuI CTGAAG 2 cut(s) 141, 486
AfiI CCNNNNNNNGG 3 cut(s) 686, 906, 907
AflIII ACRYGT 1 cut(s) 1011
AgeI ACCGGT 1 cut(s) 1117
AgsI TTSAA 7 cut(s) 340, 352, 376, 528, 627, 727, 1115
AjiI CACGTC 1 cut(s) 39
AjnI CCWGG 1 cut(s) 326
AjuI GAANNNNNNNTTGG 2 cut(s) 53, 85
AluBI AGCT 5 cut(s) 161, 293, 914, 929, 971
AluI AGCT 5 cut(s) 161, 293, 914, 929, 971
Alw26I GTCTC 3 cut(s) 281, 432, 861
AlwI GGATC 1 cut(s) 859
AoxI GGCC 2 cut(s) 180, 450
ApeKI GCWGC 4 cut(s) 542, 704, 911, 968
AsiGI ACCGGT 1 cut(s) 1117
Asp700I GAANNNNTTC 2 cut(s) 380, 648
AspLEI GCGC 3 cut(s) 198, 523, 700
AspS9I GGNCC 4 cut(s) 268, 450, 896, 944
AsuC2I CCSGG 1 cut(s) 424
AsuHPI GGTGA 1 cut(s) 611
AsuII TTCGAA 1 cut(s) 791
AvaII GGWCC 3 cut(s) 268, 896, 944
BalI TGGCCA 1 cut(s) 182
BanI GGYRCC 1 cut(s) 1154
BbsI GAAGAC 2 cut(s) 503, 929
BbvI GCAGC 4 cut(s) 554, 691, 923, 980
BccI CCATC 1 cut(s) 912
BceAI ACGGC 2 cut(s) 437, 872
BcgI CGANNNNNNTGC 2 cut(s) 33, 67
BciT130I CCWGG 1 cut(s) 328
BcnI CCSGG 1 cut(s) 424
BcoDI GTCTC 3 cut(s) 281, 432, 861
BfuAI ACCTGC 3 cut(s) 270, 613, 1127
BisI GCNGC 5 cut(s) 143, 543, 705, 912, 969
BlsI GCNGC 5 cut(s) 144, 544, 706, 913, 970
Bme1390I CCNGG 2 cut(s) 328, 424
Bme18I GGWCC 3 cut(s) 268, 896, 944
BmgBI CACGTC 1 cut(s) 39
BmgT120I GGNCC 4 cut(s) 268, 450, 896, 944
BmiI GGNNCC 4 cut(s) 897, 898, 946, 1156
BmrFI CCNGG 2 cut(s) 328, 424
BmrI ACTGGG 2 cut(s) 648, 895
BmsI GCATC 3 cut(s) 132, 426, 1056
BmuI ACTGGG 2 cut(s) 648, 895
BpiI GAAGAC 2 cut(s) 503, 929
Bpu14I TTCGAA 1 cut(s) 791
BpuEI CTTGAG 1 cut(s) 287
BpuMI CCSGG 1 cut(s) 424
BsaBI GATNNNNATC 2 cut(s) 248, 254
BsaI GGTCTC 1 cut(s) 432
BsaJI CCNNGG 3 cut(s) 392, 1129, 1150
BsaWI WCCGGW 1 cut(s) 1117
Bsc4I CCNNNNNNNGG 3 cut(s) 686, 906, 907
Bse118I RCCGGY 1 cut(s) 1117
Bse1I ACTGG 3 cut(s) 509, 654, 901
Bse3DI GCAATG 1 cut(s) 882
Bse8I GATNNNNATC 2 cut(s) 248, 254
BseBI CCWGG 1 cut(s) 328
BseDI CCNNGG 3 cut(s) 392, 1129, 1150
BseGI GGATG 4 cut(s) 123, 401, 807, 923
BseJI GATNNNNATC 2 cut(s) 248, 254
BseLI CCNNNNNNNGG 3 cut(s) 686, 906, 907
BseMI GCAATG 1 cut(s) 882
BseMII CTCAG 5 cut(s) 34, 153, 203, 308, 986
BseNI ACTGG 3 cut(s) 509, 654, 901
BseXI GCAGC 4 cut(s) 554, 691, 923, 980
Bsh1285I CGRYCG 1 cut(s) 549
BshFI GGCC 2 cut(s) 182, 452
BshNI GGYRCC 1 cut(s) 1154
BshTI ACCGGT 1 cut(s) 1117
BsiEI CGRYCG 1 cut(s) 549
BsiSI CCGG 3 cut(s) 266, 423, 1118
BslFI GGGAC 2 cut(s) 882, 930
BslI CCNNNNNNNGG 3 cut(s) 686, 906, 907
BsmAI GTCTC 3 cut(s) 281, 432, 861
BsmFI GGGAC 2 cut(s) 882, 930
BsmI GAATGC 3 cut(s) 115, 523, 767
BsnI GGCC 2 cut(s) 182, 452
Bso31I GGTCTC 1 cut(s) 432
Bsp119I TTCGAA 1 cut(s) 791
Bsp143I GATC 6 cut(s) 3, 233, 249, 717, 864, 1021
Bsp19I CCATGG 1 cut(s) 392
BspACI CCGC 1 cut(s) 143
BspANI GGCC 2 cut(s) 182, 452
BspCNI CTCAG 5 cut(s) 33, 154, 202, 307, 985
BspLI GGNNCC 4 cut(s) 897, 898, 946, 1156
BspMI ACCTGC 3 cut(s) 270, 613, 1127
BspPI GGATC 1 cut(s) 859
BspT104I TTCGAA 1 cut(s) 791
BspT107I GGYRCC 1 cut(s) 1154
BspTNI GGTCTC 1 cut(s) 432
BsrDI GCAATG 1 cut(s) 882
BsrFI RCCGGY 1 cut(s) 1117
BsrI ACTGG 3 cut(s) 509, 654, 901
BssAI RCCGGY 1 cut(s) 1117
BssECI CCNNGG 3 cut(s) 392, 1129, 1150
BssMI GATC 6 cut(s) 3, 233, 249, 717, 864, 1021
BssT1I CCWWGG 3 cut(s) 392, 1129, 1150
Bst2UI CCWGG 1 cut(s) 328
Bst4CI ACNGT 4 cut(s) 48, 550, 675, 1211
Bst6I CTCTTC 1 cut(s) 13
BstAPI GCANNNNNTGC 1 cut(s) 1142
BstBI TTCGAA 1 cut(s) 791
BstC8I GCNNGC 2 cut(s) 276, 702
BstDEI CTNAG 5 cut(s) 20, 162, 189, 294, 972
BstDSI CCRYGG 1 cut(s) 392
BstF5I GGATG 4 cut(s) 123, 401, 807, 923
BstHHI GCGC 3 cut(s) 198, 523, 700
BstKTI GATC 6 cut(s) 6, 236, 252, 720, 867, 1024
BstMAI GTCTC 3 cut(s) 281, 432, 861
BstMBI GATC 6 cut(s) 3, 233, 249, 717, 864, 1021
BstMCI CGRYCG 1 cut(s) 549
BstMWI GCNNNNNNNGC 4 cut(s) 179, 271, 704, 1142
BstNI CCWGG 1 cut(s) 328
BstNSI RCATGY 2 cut(s) 539, 1015
BstSCI CCNGG 2 cut(s) 326, 422
BstV1I GCAGC 4 cut(s) 554, 691, 923, 980
BstV2I GAAGAC 2 cut(s) 503, 929
BstXI CCANNNNNNTGG 1 cut(s) 393
BsuRI GGCC 2 cut(s) 182, 452
BtgI CCRYGG 1 cut(s) 392
BtrI CACGTC 1 cut(s) 39
BtsCI GGATG 4 cut(s) 123, 401, 807, 923
BtsI GCAGTG 1 cut(s) 522
BtsIMutI CAGTG 4 cut(s) 522, 619, 671, 826
BveI ACCTGC 3 cut(s) 270, 613, 1127
Cac8I GCNNGC 2 cut(s) 276, 702
CfoI GCGC 3 cut(s) 198, 523, 700
Cfr10I RCCGGY 1 cut(s) 1117
Cfr13I GGNCC 4 cut(s) 268, 450, 896, 944
CsiI ACCWGGT 1 cut(s) 326
CspAI ACCGGT 1 cut(s) 1117
CviAII CATG 6 cut(s) 393, 447, 536, 730, 826, 1012
DdeI CTNAG 5 cut(s) 20, 162, 189, 294, 972
DpnI GATC 6 cut(s) 5, 235, 251, 719, 866, 1023
DpnII GATC 6 cut(s) 3, 233, 249, 717, 864, 1021
EaeI YGGCCR 1 cut(s) 180
Eam1104I CTCTTC 1 cut(s) 13
EarI CTCTTC 1 cut(s) 13
Eco130I CCWWGG 3 cut(s) 392, 1129, 1150
Eco31I GGTCTC 1 cut(s) 432
Eco32I GATATC 1 cut(s) 756
Eco47I GGWCC 3 cut(s) 268, 896, 944
Eco57I CTGAAG 2 cut(s) 141, 486
EcoO109I RGGNCCY 1 cut(s) 896
EcoRII CCWGG 1 cut(s) 326
EcoRV GATATC 1 cut(s) 756
EcoT14I CCWWGG 3 cut(s) 392, 1129, 1150
ErhI CCWWGG 3 cut(s) 392, 1129, 1150
FaeI CATG 6 cut(s) 396, 450, 539, 733, 829, 1015
FaqI GGGAC 2 cut(s) 882, 930
FatI CATG 6 cut(s) 392, 446, 535, 729, 825, 1011
FauNDI CATATG 1 cut(s) 956
Fnu4HI GCNGC 5 cut(s) 143, 543, 705, 912, 969
FokI GGATG 4 cut(s) 110, 388, 814, 930
Fsp4HI GCNGC 5 cut(s) 143, 543, 705, 912, 969
GlaI GCGC 3 cut(s) 197, 522, 699
GluI GCNGC 5 cut(s) 143, 543, 705, 912, 969
HaeIII GGCC 2 cut(s) 182, 452
HapII CCGG 3 cut(s) 266, 423, 1118
HhaI GCGC 3 cut(s) 198, 523, 700
Hin1II CATG 6 cut(s) 396, 450, 539, 733, 829, 1015
Hin6I GCGC 3 cut(s) 196, 521, 698
HinP1I GCGC 3 cut(s) 196, 521, 698
HinfI GANTC 4 cut(s) 187, 298, 871, 1242
HpaII CCGG 3 cut(s) 266, 423, 1118
HphI GGTGA 1 cut(s) 611
Hpy166II GTNNAC 3 cut(s) 602, 664, 1187
Hpy188III TCNNGA 7 cut(s) 52, 304, 493, 592, 868, 1051, 1246
Hpy8I GTNNAC 3 cut(s) 602, 664, 1187
Hpy99I CGWCG 2 cut(s) 43, 893
HpyAV CCTTC 4 cut(s) 277, 361, 799, 1168
HpyCH4III ACNGT 4 cut(s) 48, 550, 675, 1211
HpyCH4IV ACGT 2 cut(s) 38, 407
HpyCH4V TGCA 6 cut(s) 173, 515, 569, 935, 1145, 1221
HpyF10VI GCNNNNNNNGC 4 cut(s) 179, 271, 704, 1142
HpyF3I CTNAG 5 cut(s) 20, 162, 189, 294, 972
HpySE526I ACGT 2 cut(s) 38, 407
Hsp92II CATG 6 cut(s) 396, 450, 539, 733, 829, 1015
HspAI GCGC 3 cut(s) 196, 521, 698
KflI GGGWCCC 1 cut(s) 896
Kzo9I GATC 6 cut(s) 3, 233, 249, 717, 864, 1021
LmnI GCTCC 1 cut(s) 1133
Lsp1109I GCAGC 4 cut(s) 554, 691, 923, 980
LweI GCATC 3 cut(s) 132, 426, 1056
MabI ACCWGGT 1 cut(s) 326
MaeII ACGT 2 cut(s) 38, 407
MaeIII GTNAC 3 cut(s) 411, 709, 1014
MalI GATC 6 cut(s) 5, 235, 251, 719, 866, 1023
MboI GATC 6 cut(s) 3, 233, 249, 717, 864, 1021
MboII GAAGA 5 cut(s) 147, 508, 805, 934, 973
MfeI CAATTG 2 cut(s) 528, 1123
MlsI TGGCCA 1 cut(s) 182
MluCI AATT 5 cut(s) 528, 681, 721, 949, 1123
MluNI TGGCCA 1 cut(s) 182
MlyI GAGTC 2 cut(s) 181, 292
Mox20I TGGCCA 1 cut(s) 182
MroXI GAANNNNTTC 2 cut(s) 380, 648
MscI TGGCCA 1 cut(s) 182
MseI TTAA 3 cut(s) 1037, 1202, 1264
MslI CAYNNNNRTG 1 cut(s) 391
Msp20I TGGCCA 1 cut(s) 182
MspA1I CMGCKG 2 cut(s) 161, 914
MspI CCGG 3 cut(s) 266, 423, 1118
MspR9I CCNGG 2 cut(s) 328, 424
MunI CAATTG 2 cut(s) 528, 1123
Mva1269I GAATGC 3 cut(s) 115, 523, 767
MvaI CCWGG 1 cut(s) 328
MwoI GCNNNNNNNGC 4 cut(s) 179, 271, 704, 1142
NciI CCSGG 1 cut(s) 424
NcoI CCATGG 1 cut(s) 392
NdeI CATATG 1 cut(s) 956
NdeII GATC 6 cut(s) 3, 233, 249, 717, 864, 1021
NlaIII CATG 6 cut(s) 396, 450, 539, 733, 829, 1015
NlaIV GGNNCC 4 cut(s) 897, 898, 946, 1156
NmuCI GTSAC 2 cut(s) 411, 1014
NspI RCATGY 2 cut(s) 539, 1015
NspV TTCGAA 1 cut(s) 791
PciI ACATGT 1 cut(s) 1011
PctI GAATGC 3 cut(s) 115, 523, 767
PdmI GAANNNNTTC 2 cut(s) 380, 648
PfeI GAWTC 2 cut(s) 871, 1242
PinAI ACCGGT 1 cut(s) 1117
PkrI GCNGC 5 cut(s) 144, 544, 706, 913, 970
PleI GAGTC 2 cut(s) 181, 292
PpsI GAGTC 2 cut(s) 181, 292
PpuMI RGGWCCY 1 cut(s) 896
PscI ACATGT 1 cut(s) 1011
Psp5II RGGWCCY 1 cut(s) 896
Psp6I CCWGG 1 cut(s) 326
PspGI CCWGG 1 cut(s) 326
PspN4I GGNNCC 4 cut(s) 897, 898, 946, 1156
PspPI GGNCC 4 cut(s) 268, 450, 896, 944
PspPPI RGGWCCY 1 cut(s) 896
PvuII CAGCTG 2 cut(s) 161, 914
RseI CAYNNNNRTG 1 cut(s) 391
SaqAI TTAA 3 cut(s) 1037, 1202, 1264
SatI GCNGC 5 cut(s) 143, 543, 705, 912, 969
Sau3AI GATC 6 cut(s) 3, 233, 249, 717, 864, 1021
Sau96I GGNCC 4 cut(s) 268, 450, 896, 944
SchI GAGTC 2 cut(s) 181, 292
ScrFI CCNGG 2 cut(s) 328, 424
SexAI ACCWGGT 1 cut(s) 326
SfaNI GCATC 3 cut(s) 132, 426, 1056
SfuI TTCGAA 1 cut(s) 791
SinI GGWCC 3 cut(s) 268, 896, 944
SmiMI CAYNNNNRTG 1 cut(s) 391
SmlI CTYRAG 1 cut(s) 302
SmoI CTYRAG 1 cut(s) 302
Sse9I AATT 5 cut(s) 528, 681, 721, 949, 1123
SsiI CCGC 1 cut(s) 143
SspI AATATT 1 cut(s) 103
StyD4I CCNGG 2 cut(s) 326, 422
StyI CCWWGG 3 cut(s) 392, 1129, 1150
TaaI ACNGT 4 cut(s) 48, 550, 675, 1211
TaiI ACGT 2 cut(s) 41, 410
TaqI TCGA 6 cut(s) 53, 203, 258, 791, 891, 1020
TasI AATT 5 cut(s) 528, 681, 721, 949, 1123
TauI GCSGC 1 cut(s) 145
TfiI GAWTC 2 cut(s) 871, 1242
Tru1I TTAA 3 cut(s) 1037, 1202, 1264
Tru9I TTAA 3 cut(s) 1037, 1202, 1264
TscAI CASTG 4 cut(s) 522, 619, 678, 826
TseFI GTSAC 2 cut(s) 411, 1014
TseI GCWGC 4 cut(s) 542, 704, 911, 968
Tsp45I GTSAC 2 cut(s) 411, 1014
TspDTI ATGAA 7 cut(s) 435, 564, 818, 842, 943, 996, 1076
TspGWI ACGGA 2 cut(s) 864, 1063
TspRI CASTG 4 cut(s) 522, 619, 678, 826
VpaK11BI GGWCC 3 cut(s) 268, 896, 944
XceI RCATGY 2 cut(s) 539, 1015
XcmI CCANNNNNNNNNTGG 1 cut(s) 481
XmnI GAANNNNTTC 2 cut(s) 380, 648
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.