AT1G73165

No description available

Basic Information

Type: gene
Biological Identity
arabidopsis_thaliana
1
Physical Location & Seq
Reverse (-)
27508444 .. 27509272
829 bp
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UTR
Exon/CDS
Intron
AT1G73165.1

Sequence Viewer

Length: 225 bp
ATGGCTAACTTGAAATTCTTGCTGTGCTTGTTCTTGATCTGCGTTTCCTTATCGCGTTCATCAGCGTCTCGACCGATGTTCCCAAACGCAGACGGGATTAAACGAGGGCGTATGATGATAGAAGCAGAGGAAGTGTTGAAAGCGAGTATGGAGAAGCTAATGGAGAGAGGTTTTAATGAGTCCATGAGACTCAGTCCTGGAGGTCCCGATCCTCGCCATCACTAA
Functional Annotation
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
No domains found.

Protein Analysis

74

Amino Acids

8.34

Weight (kDa)

9.3

Isoelectric Point (pI)

45.98

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0019569)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G73165
prunus_persica Prupe.4G170900_v2.0.a1
pyrus_communis pycom03g18490
rosa_roxburghii Rroxscaffold_1G00048780
rosa_samantha Rh5BG219100 Rh5CG242600 Rh5DG224500

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccII CGCG 1 cut(s) 55
AclWI GGATC 1 cut(s) 203
AcsI RAATTY 1 cut(s) 14
AgsI TTSAA 2 cut(s) 13, 139
AjnI CCWGG 1 cut(s) 196
AluBI AGCT 1 cut(s) 157
AluI AGCT 1 cut(s) 157
Alw26I GTCTC 2 cut(s) 72, 181
AlwI GGATC 1 cut(s) 203
ApoI RAATTY 1 cut(s) 14
AspS9I GGNCC 1 cut(s) 203
AvaII GGWCC 1 cut(s) 203
BciT130I CCWGG 1 cut(s) 198
BcoDI GTCTC 2 cut(s) 72, 181
Bme1390I CCNGG 1 cut(s) 198
Bme18I GGWCC 1 cut(s) 203
BmgT120I GGNCC 1 cut(s) 203
BmiI GGNNCC 1 cut(s) 205
BmrFI CCNGG 1 cut(s) 198
BpmI CTGGAG 1 cut(s) 219
BseBI CCWGG 1 cut(s) 198
BseMII CTCAG 1 cut(s) 205
Bsh1236I CGCG 1 cut(s) 55
Bsh1285I CGRYCG 1 cut(s) 74
BsiEI CGRYCG 1 cut(s) 74
BslFI GGGAC 1 cut(s) 189
BsmAI GTCTC 2 cut(s) 72, 181
BsmBI CGTCTC 1 cut(s) 72
BsmFI GGGAC 1 cut(s) 189
Bsp143I GATC 2 cut(s) 36, 208
BspCNI CTCAG 1 cut(s) 204
BspFNI CGCG 1 cut(s) 55
BspLI GGNNCC 1 cut(s) 205
BspPI GGATC 1 cut(s) 203
BssMI GATC 2 cut(s) 36, 208
Bst2UI CCWGG 1 cut(s) 198
BstDEI CTNAG 1 cut(s) 191
BstFNI CGCG 1 cut(s) 55
BstKTI GATC 2 cut(s) 39, 211
BstMAI GTCTC 2 cut(s) 72, 181
BstMBI GATC 2 cut(s) 36, 208
BstMCI CGRYCG 1 cut(s) 74
BstNI CCWGG 1 cut(s) 198
BstSCI CCNGG 1 cut(s) 196
BstUI CGCG 1 cut(s) 55
Cfr13I GGNCC 1 cut(s) 203
CseI GACGC 1 cut(s) 54
CviAII CATG 1 cut(s) 184
CviJI RGCY 2 cut(s) 5, 157
CviKI_1 RGCY 2 cut(s) 5, 157
DdeI CTNAG 1 cut(s) 191
DpnI GATC 2 cut(s) 38, 210
DpnII GATC 2 cut(s) 36, 208
Eco47I GGWCC 1 cut(s) 203
EcoO109I RGGNCCY 1 cut(s) 203
EcoRII CCWGG 1 cut(s) 196
Esp3I CGTCTC 1 cut(s) 72
FaeI CATG 1 cut(s) 187
FaiI YATR 3 cut(s) 113, 149, 185
FaqI GGGAC 1 cut(s) 189
FatI CATG 1 cut(s) 183
GsuI CTGGAG 1 cut(s) 219
HgaI GACGC 1 cut(s) 54
Hin1II CATG 1 cut(s) 187
HinfI GANTC 2 cut(s) 179, 189
Hpy188III TCNNGA 3 cut(s) 34, 69, 206
HpyF3I CTNAG 1 cut(s) 191
Hsp92II CATG 1 cut(s) 187
Kzo9I GATC 2 cut(s) 36, 208
LpnPI CCDG 2 cut(s) 183, 210
MalI GATC 2 cut(s) 38, 210
MboI GATC 2 cut(s) 36, 208
MluCI AATT 1 cut(s) 14
MlyI GAGTC 2 cut(s) 183, 188
MnlI CCTC 5 cut(s) 98, 121, 161, 194, 222
MseI TTAA 2 cut(s) 99, 174
MspR9I CCNGG 1 cut(s) 198
MvaI CCWGG 1 cut(s) 198
MvnI CGCG 1 cut(s) 55
NdeII GATC 2 cut(s) 36, 208
NlaIII CATG 1 cut(s) 187
NlaIV GGNNCC 1 cut(s) 205
PflFI GACNNNGTC 1 cut(s) 192
PfoI TCCNGGA 1 cut(s) 196
PleI GAGTC 2 cut(s) 183, 187
PpsI GAGTC 2 cut(s) 183, 187
PpuMI RGGWCCY 1 cut(s) 203
Psp5II RGGWCCY 1 cut(s) 203
Psp6I CCWGG 1 cut(s) 196
PspGI CCWGG 1 cut(s) 196
PspN4I GGNNCC 1 cut(s) 205
PspPI GGNCC 1 cut(s) 203
PspPPI RGGWCCY 1 cut(s) 203
PsyI GACNNNGTC 1 cut(s) 192
SaqAI TTAA 2 cut(s) 99, 174
Sau3AI GATC 2 cut(s) 36, 208
Sau96I GGNCC 1 cut(s) 203
SchI GAGTC 2 cut(s) 183, 188
ScrFI CCNGG 1 cut(s) 198
SetI ASST 3 cut(s) 159, 172, 205
SinI GGWCC 1 cut(s) 203
Sse9I AATT 1 cut(s) 14
StyD4I CCNGG 1 cut(s) 196
TaqI TCGA 1 cut(s) 70
TaqII GACCGA 1 cut(s) 88
TasI AATT 1 cut(s) 14
Tru1I TTAA 2 cut(s) 99, 174
Tru9I TTAA 2 cut(s) 99, 174
TspDTI ATGAA 1 cut(s) 48
Tth111I GACNNNGTC 1 cut(s) 192
VpaK11BI GGWCC 1 cut(s) 203
XapI RAATTY 1 cut(s) 14
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.