citrate (Si)-synthase activity
Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.
| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT2G11270 |
| rosa_multiflora | Rmu_sc0005182.1_g000005 Rmu_sc0007826.1_g000005 |
| rosa_rugosa | Rorug07G0306100 |
| rosa_samantha | Rh6AG285600 Rh6BG287000 Rh6CG288100 Rh7BG432900 Rh7CG479600 Rh7DG448700 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AfaI | GTAC | 1 cut(s) | 198 |
| AgsI | TTSAA | 1 cut(s) | 121 |
| AluBI | AGCT | 1 cut(s) | 73 |
| AluI | AGCT | 1 cut(s) | 73 |
| AspS9I | GGNCC | 1 cut(s) | 130 |
| AsuHPI | GGTGA | 1 cut(s) | 175 |
| AsuII | TTCGAA | 1 cut(s) | 137 |
| AvaII | GGWCC | 1 cut(s) | 130 |
| BclI | TGATCA | 2 cut(s) | 18, 66 |
| BfaI | CTAG | 1 cut(s) | 90 |
| Bme18I | GGWCC | 1 cut(s) | 130 |
| BmgT120I | GGNCC | 1 cut(s) | 130 |
| BmiI | GGNNCC | 1 cut(s) | 168 |
| Bpu14I | TTCGAA | 1 cut(s) | 137 |
| BsaWI | WCCGGW | 1 cut(s) | 221 |
| Bse1I | ACTGG | 1 cut(s) | 170 |
| Bse3DI | GCAATG | 1 cut(s) | 243 |
| BseGI | GGATG | 1 cut(s) | 222 |
| BseMI | GCAATG | 1 cut(s) | 243 |
| BseNI | ACTGG | 1 cut(s) | 170 |
| BsiSI | CCGG | 1 cut(s) | 222 |
| Bsp119I | TTCGAA | 1 cut(s) | 137 |
| Bsp143I | GATC | 2 cut(s) | 18, 66 |
| BspLI | GGNNCC | 1 cut(s) | 168 |
| BspQI | GCTCTTC | 1 cut(s) | 80 |
| BspT104I | TTCGAA | 1 cut(s) | 137 |
| BsrDI | GCAATG | 1 cut(s) | 243 |
| BsrI | ACTGG | 1 cut(s) | 170 |
| BssMI | GATC | 2 cut(s) | 18, 66 |
| Bst4CI | ACNGT | 2 cut(s) | 134, 187 |
| Bst6I | CTCTTC | 1 cut(s) | 80 |
| BstBI | TTCGAA | 1 cut(s) | 137 |
| BstF5I | GGATG | 1 cut(s) | 222 |
| BstKTI | GATC | 2 cut(s) | 21, 69 |
| BstMBI | GATC | 2 cut(s) | 18, 66 |
| BtsCI | GGATG | 1 cut(s) | 222 |
| BtsIMutI | CAGTG | 1 cut(s) | 177 |
| Cfr13I | GGNCC | 1 cut(s) | 130 |
| Csp6I | GTAC | 1 cut(s) | 197 |
| CviAII | CATG | 2 cut(s) | 59, 158 |
| CviJI | RGCY | 1 cut(s) | 73 |
| CviKI_1 | RGCY | 1 cut(s) | 73 |
| CviQI | GTAC | 1 cut(s) | 197 |
| DpnI | GATC | 2 cut(s) | 20, 68 |
| DpnII | GATC | 2 cut(s) | 18, 66 |
| Eam1104I | CTCTTC | 1 cut(s) | 80 |
| EarI | CTCTTC | 1 cut(s) | 80 |
| Eco47I | GGWCC | 1 cut(s) | 130 |
| FaeI | CATG | 2 cut(s) | 62, 161 |
| FaiI | YATR | 4 cut(s) | 60, 103, 159, 194 |
| FatI | CATG | 2 cut(s) | 58, 157 |
| FbaI | TGATCA | 2 cut(s) | 18, 66 |
| FokI | GGATG | 1 cut(s) | 229 |
| FspBI | CTAG | 1 cut(s) | 90 |
| HapII | CCGG | 1 cut(s) | 222 |
| Hin1II | CATG | 2 cut(s) | 62, 161 |
| HpaII | CCGG | 1 cut(s) | 222 |
| HphI | GGTGA | 1 cut(s) | 175 |
| Hpy188I | TCNGA | 1 cut(s) | 11 |
| Hpy188III | TCNNGA | 2 cut(s) | 90, 128 |
| HpyCH4III | ACNGT | 2 cut(s) | 134, 187 |
| Hsp92II | CATG | 2 cut(s) | 62, 161 |
| Ksp22I | TGATCA | 2 cut(s) | 18, 66 |
| Kzo9I | GATC | 2 cut(s) | 18, 66 |
| LguI | GCTCTTC | 1 cut(s) | 80 |
| LpnPI | CCDG | 3 cut(s) | 113, 183, 235 |
| MaeI | CTAG | 1 cut(s) | 90 |
| MaeIII | GTNAC | 1 cut(s) | 236 |
| MalI | GATC | 2 cut(s) | 20, 68 |
| MboI | GATC | 2 cut(s) | 18, 66 |
| MboII | GAAGA | 2 cut(s) | 67, 151 |
| MluCI | AATT | 1 cut(s) | 149 |
| MnlI | CCTC | 2 cut(s) | 206, 251 |
| MseI | TTAA | 3 cut(s) | 30, 35, 152 |
| MspI | CCGG | 1 cut(s) | 222 |
| NdeII | GATC | 2 cut(s) | 18, 66 |
| NlaIII | CATG | 2 cut(s) | 62, 161 |
| NlaIV | GGNNCC | 1 cut(s) | 168 |
| NspV | TTCGAA | 1 cut(s) | 137 |
| PciSI | GCTCTTC | 1 cut(s) | 80 |
| PspN4I | GGNNCC | 1 cut(s) | 168 |
| PspPI | GGNCC | 1 cut(s) | 130 |
| RsaI | GTAC | 1 cut(s) | 198 |
| RsaNI | GTAC | 1 cut(s) | 197 |
| SapI | GCTCTTC | 1 cut(s) | 80 |
| SaqAI | TTAA | 3 cut(s) | 30, 35, 152 |
| Sau3AI | GATC | 2 cut(s) | 18, 66 |
| Sau96I | GGNCC | 1 cut(s) | 130 |
| SetI | ASST | 3 cut(s) | 75, 168, 243 |
| SfuI | TTCGAA | 1 cut(s) | 137 |
| SgeI | CNNG | 8 cut(s) | 71, 82, 102, 140, 170, 182, 212, 234 |
| SinI | GGWCC | 1 cut(s) | 130 |
| Sse9I | AATT | 1 cut(s) | 149 |
| SspMI | CTAG | 1 cut(s) | 90 |
| TaaI | ACNGT | 2 cut(s) | 134, 187 |
| TaqI | TCGA | 1 cut(s) | 137 |
| TasI | AATT | 1 cut(s) | 149 |
| Tru1I | TTAA | 3 cut(s) | 30, 35, 152 |
| Tru9I | TTAA | 3 cut(s) | 30, 35, 152 |
| TscAI | CASTG | 1 cut(s) | 177 |
| TspDTI | ATGAA | 2 cut(s) | 47, 90 |
| TspRI | CASTG | 1 cut(s) | 177 |
| VpaK11BI | GGWCC | 1 cut(s) | 130 |
| XbaI | TCTAGA | 1 cut(s) | 89 |
| XspI | CTAG | 1 cut(s) | 90 |