AT2G22810

1-aminocyclopropane-1-carboxylate synthase

Basic Information

Type: gene
Biological Identity
arabidopsis_thaliana
2
Physical Location & Seq
Reverse (-)
9717602 .. 9719594
1993 bp
Loading structure...
UTR
Exon/CDS
Intron
AT2G22810.1

Sequence Viewer

Length: 1425 bp
ATGGTTCAATTGTCAAGAAAAGCTACATGCAACAGCCATGGCCAAGTCTCTTCGTATTTCCTTGGTTGGGAAGAGTACGAGAAGAATCCTTACGACGTTACCAAGAACCCTCAAGGCATTATCCAGATGGGTCTTGCGGAAAATCAGCTATGCTTTGATCTACTAGAGTCATGGCTTGCACAAAACACAGACGCAGCCTGTTTCAAGAGAGATGGCCAGTCTGTTTTCCGGGAACTCGCTCTCTTTCAAGACTACCATGGCCTCTCTTCCTTCAAAAATGCCTTTGCTGATTTCATGTCAGAAAATAGAGGAAATCGAGTTTCTTTTGATTCAAACAACCTTGTGCTCACTGCTGGAGCCACTTCCGCAAACGAGACTCTAATGTTTTGTCTTGCAGATCCCGGTGACGCTTTCTTGCTTCCCACGCCATATTATCCAGGGTTTGATAGGGATCTAAAATGGCGAACCGGGGTTGAGATTGTACCAATCCAAAGCTCAAGTACTAACGGGTTTCGCATAACGAAACTTGCACTCGAAGAAGCCTACGAGCAAGCCAAGAAGCTTGACCTAAACGTCAAAGGAATACTCATCACCAACCCATCTAACCCTTTGGGTACGACAACAACCCAAACCGAACTCAACATTCTATTTGATTTCATCACCAAGAATAAGAATATACATTTAGTAAGTGACGAGATATATTCGGGCACAGTATTCAACTCTTCAGAATTCATCAGCGTCATGGAGATTCTAAAAAATAATCAACTCGAAAACACCGATGTTTTGAACCGAGTCCACATTGTTTGTAGCTTATCTAAAGATCTAGGCCTCCCTGGTTTTAGAGTTGGAGCCATTTACTCCAATGACAAAGATGTCATCTCTGCCGCTACAAAAATGTCAAGTTTCGGCCTTGTCTCCTCCCAGACACAATACCTACTATCCTCATTATTATCTGACAAGAAGTTCACTAAGAACTACCTTAGAGAGAACCAAAAACGGCTCAAGAACAGACAGAGAAAGCTCGTGTTGGGTCTAGAGGCCATCGGGATCAAATGTCTGAAGAGTAATGCGGGACTCTTTTGTTGGGTCGACATGAGACCTCTCCTTAGATCTAAAACGTTCGAAGCGGAAATGGATCTTTGGAAGAAGATTGTTTACGAAGTGAAGCTCAACATCTCTCCTGGTTCGTCGTGCCATTGTGAAGAACCGGGTTGGTTTAGAGTTTGTTTCGCGAACATGATTGATGAGACATTAAAGCTTGCTTTAAAGAGATTGAAGATGTTGGTTGATGATGAAAACTCAAGTAGAAGATGCCAAAAGAGTAAAAGCGAAAGACTAAACGGTTCGAGGAAGAAGACGATGTCAAATGTCTCTAACTGGGTTTTCCGACTATCGTTTCACGACCGTGAGGCTGAGGAACGATAG

Protein Analysis

474

Amino Acids

53.79

Weight (kDa)

8.5

Isoelectric Point (pI)

38.18

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Aminotran_1_2 PF00155 41 - 425 9.1e-97 Aminotransferase class I and II
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Orthologous Genes (Group: OG0012883)

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 2 cut(s) 572, 872
AccI GTMKAC 1 cut(s) 1089
AccII CGCG 1 cut(s) 1232
AciI CCGC 5 cut(s) 137, 366, 885, 1070, 1127
AclI AACGTT 1 cut(s) 1118
AclWI GGATC 4 cut(s) 392, 459, 1055, 1143
AcoI YGGCCR 2 cut(s) 40, 214
AcsI RAATTY 1 cut(s) 728
AcuI CTGAAG 2 cut(s) 708, 1079
AfaI GTAC 4 cut(s) 77, 483, 502, 616
AfiI CCNNNNNNNGG 1 cut(s) 67
AgsI TTSAA 8 cut(s) 8, 205, 248, 274, 333, 718, 787, 1276
AjnI CCWGG 3 cut(s) 436, 832, 1180
AleI CACNNNNGTG 1 cut(s) 1404
AluBI AGCT 8 cut(s) 23, 148, 495, 562, 810, 1021, 1168, 1258
AluI AGCT 8 cut(s) 23, 148, 495, 562, 810, 1021, 1168, 1258
Alw21I GWGCWC 1 cut(s) 348
Alw26I GTCTC 6 cut(s) 52, 368, 919, 1090, 1241, 1375
AlwI GGATC 4 cut(s) 392, 459, 1055, 1143
AoxI GGCC 6 cut(s) 40, 214, 259, 826, 907, 1038
ApeKI GCWGC 1 cut(s) 194
ApoI RAATTY 1 cut(s) 728
AsuC2I CCSGG 4 cut(s) 230, 402, 469, 1209
AsuHPI GGTGA 3 cut(s) 416, 583, 652
AsuII TTCGAA 1 cut(s) 1122
BaeGI GKGCMC 1 cut(s) 710
BalI TGGCCA 2 cut(s) 42, 216
BarI GAAGNNNNNNTAC 4 cut(s) 74, 106, 1139, 1171
BauI CACGAG 1 cut(s) 1022
BbsI GAAGAC 1 cut(s) 1361
Bbv12I GWGCWC 1 cut(s) 348
BbvCI CCTCAGC 1 cut(s) 1413
BbvI GCAGC 1 cut(s) 206
BccI CCATC 4 cut(s) 121, 206, 607, 1049
BceAI ACGGC 1 cut(s) 1013
BciT130I CCWGG 3 cut(s) 438, 834, 1182
BcnI CCSGG 4 cut(s) 230, 402, 469, 1209
BcoDI GTCTC 6 cut(s) 52, 368, 919, 1090, 1241, 1375
BfaI CTAG 3 cut(s) 164, 824, 1034
BglII AGATCT 2 cut(s) 820, 1109
BisI GCNGC 2 cut(s) 195, 885
BlsI GCNGC 2 cut(s) 196, 886
BmcAI AGTACT 1 cut(s) 502
Bme1390I CCNGG 7 cut(s) 230, 402, 438, 469, 834, 1182, 1209
BmiI GGNNCC 2 cut(s) 358, 850
BmrFI CCNGG 7 cut(s) 230, 402, 438, 469, 834, 1182, 1209
BmrI ACTGGG 1 cut(s) 1387
BmsI GCATC 1 cut(s) 1301
BmuI ACTGGG 1 cut(s) 1387
BpiI GAAGAC 1 cut(s) 1361
BpmI CTGGAG 1 cut(s) 375
Bpu10I CCTNAGC 1 cut(s) 1413
Bpu14I TTCGAA 1 cut(s) 1122
BpuEI CTTGAG 4 cut(s) 96, 481, 986, 1285
BpuMI CCSGG 4 cut(s) 230, 402, 469, 1209
BsaBI GATNNNNATC 1 cut(s) 450
BsaI GGTCTC 1 cut(s) 1090
BsaJI CCNNGG 6 cut(s) 37, 61, 256, 437, 468, 832
Bsc4I CCNNNNNNNGG 1 cut(s) 67
Bse1I ACTGG 2 cut(s) 217, 1382
Bse8I GATNNNNATC 1 cut(s) 450
BseBI CCWGG 3 cut(s) 438, 834, 1182
BseDI CCNNGG 6 cut(s) 37, 61, 256, 437, 468, 832
BseJI GATNNNNATC 1 cut(s) 450
BseLI CCNNNNNNNGG 1 cut(s) 67
BseMII CTCAG 1 cut(s) 1404
BseNI ACTGG 2 cut(s) 217, 1382
BseRI GAGGAG 1 cut(s) 907
BseSI GKGCMC 1 cut(s) 710
BseXI GCAGC 1 cut(s) 206
Bsh1236I CGCG 1 cut(s) 1232
Bsh1285I CGRYCG 1 cut(s) 1405
BshFI GGCC 6 cut(s) 42, 216, 261, 828, 909, 1040
BsiEI CGRYCG 1 cut(s) 1405
BsiHKAI GWGCWC 1 cut(s) 348
BsiSI CCGG 4 cut(s) 229, 402, 468, 1208
BslFI GGGAC 1 cut(s) 1086
BslI CCNNNNNNNGG 1 cut(s) 67
BsmAI GTCTC 6 cut(s) 52, 368, 919, 1090, 1241, 1375
BsmFI GGGAC 1 cut(s) 1086
BsnI GGCC 6 cut(s) 42, 216, 261, 828, 909, 1040
Bso31I GGTCTC 1 cut(s) 1090
Bsp119I TTCGAA 1 cut(s) 1122
Bsp1286I GDGCHC 2 cut(s) 348, 710
Bsp143I GATC 7 cut(s) 157, 397, 451, 820, 1047, 1109, 1135
Bsp19I CCATGG 2 cut(s) 37, 256
Bsp68I TCGCGA 1 cut(s) 1232
BspACI CCGC 5 cut(s) 137, 366, 885, 1070, 1127
BspANI GGCC 6 cut(s) 42, 216, 261, 828, 909, 1040
BspCNI CTCAG 1 cut(s) 1405
BspFNI CGCG 1 cut(s) 1232
BspLI GGNNCC 2 cut(s) 358, 850
BspPI GGATC 4 cut(s) 392, 459, 1055, 1143
BspT104I TTCGAA 1 cut(s) 1122
BspTNI GGTCTC 1 cut(s) 1090
BsrI ACTGG 2 cut(s) 217, 1382
BssECI CCNNGG 6 cut(s) 37, 61, 256, 437, 468, 832
BssMI GATC 7 cut(s) 157, 397, 451, 820, 1047, 1109, 1135
BssSI CACGAG 1 cut(s) 1022
BssT1I CCWWGG 3 cut(s) 37, 61, 256
Bst2BI CACGAG 1 cut(s) 1022
Bst2UI CCWGG 3 cut(s) 438, 834, 1182
Bst4CI ACNGT 3 cut(s) 712, 1343, 1406
Bst6I CTCTTC 5 cut(s) 55, 66, 271, 727, 1055
BstBI TTCGAA 1 cut(s) 1122
BstC8I GCNNGC 3 cut(s) 177, 552, 1260
BstDEI CTNAG 4 cut(s) 969, 980, 1106, 1413
BstDSI CCRYGG 2 cut(s) 37, 256
BstFNI CGCG 1 cut(s) 1232
BstKTI GATC 7 cut(s) 160, 400, 454, 823, 1050, 1112, 1138
BstMAI GTCTC 6 cut(s) 52, 368, 919, 1090, 1241, 1375
BstMBI GATC 7 cut(s) 157, 397, 451, 820, 1047, 1109, 1135
BstMCI CGRYCG 1 cut(s) 1405
BstMWI GCNNNNNNNGC 2 cut(s) 365, 424
BstNI CCWGG 3 cut(s) 438, 834, 1182
BstNSI RCATGY 1 cut(s) 30
BstSCI CCNGG 7 cut(s) 228, 400, 436, 467, 832, 1180, 1207
BstSLI GKGCMC 1 cut(s) 710
BstUI CGCG 1 cut(s) 1232
BstV1I GCAGC 1 cut(s) 206
BstV2I GAAGAC 1 cut(s) 1361
BstX2I RGATCY 5 cut(s) 397, 451, 820, 1109, 1135
BstYI RGATCY 5 cut(s) 397, 451, 820, 1109, 1135
BsuRI GGCC 6 cut(s) 42, 216, 261, 828, 909, 1040
BtgI CCRYGG 2 cut(s) 37, 256
BtsI GCAGTG 1 cut(s) 348
BtsIMutI CAGTG 1 cut(s) 348
BtuMI TCGCGA 1 cut(s) 1232
Cac8I GCNNGC 3 cut(s) 177, 552, 1260
CseI GACGC 3 cut(s) 200, 416, 727
Csp6I GTAC 4 cut(s) 76, 482, 501, 615
CspCI CAANNNNNGTGG 2 cut(s) 785, 820
CviAII CATG 8 cut(s) 27, 38, 171, 257, 295, 742, 1093, 1237
CviQI GTAC 4 cut(s) 76, 482, 501, 615
DdeI CTNAG 4 cut(s) 969, 980, 1106, 1413
DpnI GATC 7 cut(s) 159, 399, 453, 822, 1049, 1111, 1137
DpnII GATC 7 cut(s) 157, 397, 451, 820, 1047, 1109, 1135
DraI TTTAAA 1 cut(s) 1266
DrdI GACNNNNNNGTC 2 cut(s) 572, 872
DseDI GACNNNNNNGTC 2 cut(s) 572, 872
EaeI YGGCCR 2 cut(s) 40, 214
Eam1104I CTCTTC 5 cut(s) 55, 66, 271, 727, 1055
EarI CTCTTC 5 cut(s) 55, 66, 271, 727, 1055
Eco130I CCWWGG 3 cut(s) 37, 61, 256
Eco147I AGGCCT 1 cut(s) 828
Eco31I GGTCTC 1 cut(s) 1090
Eco57I CTGAAG 2 cut(s) 708, 1079
EcoRI GAATTC 1 cut(s) 728
EcoRII CCWGG 3 cut(s) 436, 832, 1180
EcoT14I CCWWGG 3 cut(s) 37, 61, 256
ErhI CCWWGG 3 cut(s) 37, 61, 256
FaeI CATG 8 cut(s) 30, 41, 174, 260, 298, 745, 1096, 1240
FaqI GGGAC 1 cut(s) 1086
FatI CATG 8 cut(s) 26, 37, 170, 256, 294, 741, 1092, 1236
FauI CCCGC 1 cut(s) 1063
FblI GTMKAC 1 cut(s) 1089
Fnu4HI GCNGC 2 cut(s) 195, 885
Fsp4HI GCNGC 2 cut(s) 195, 885
FspBI CTAG 3 cut(s) 164, 824, 1034
GluI GCNGC 2 cut(s) 195, 885
GsuI CTGGAG 1 cut(s) 375
HaeIII GGCC 6 cut(s) 42, 216, 261, 828, 909, 1040
HapII CCGG 4 cut(s) 229, 402, 468, 1208
HgaI GACGC 3 cut(s) 200, 416, 727
Hin1II CATG 8 cut(s) 30, 41, 174, 260, 298, 745, 1096, 1240
HincII GTYRAC 1 cut(s) 1090
HindII GTYRAC 1 cut(s) 1090
HindIII AAGCTT 2 cut(s) 560, 1256
HinfI GANTC 7 cut(s) 85, 167, 329, 376, 748, 792, 1074
HpaII CCGG 4 cut(s) 229, 402, 468, 1208
HphI GGTGA 3 cut(s) 416, 583, 652
Hpy166II GTNNAC 4 cut(s) 796, 966, 1090, 1156
Hpy188I TCNGA 5 cut(s) 301, 727, 955, 1059, 1388
Hpy188III TCNNGA 9 cut(s) 15, 124, 205, 248, 1003, 1034, 1045, 1231, 1400
Hpy8I GTNNAC 4 cut(s) 796, 966, 1090, 1156
Hpy99I CGWCG 2 cut(s) 98, 1192
HpyAV CCTTC 1 cut(s) 280
HpyCH4III ACNGT 3 cut(s) 712, 1343, 1406
HpyCH4IV ACGT 3 cut(s) 96, 573, 1118
HpyCH4V TGCA 4 cut(s) 30, 179, 395, 530
HpyF10VI GCNNNNNNNGC 2 cut(s) 365, 424
HpyF3I CTNAG 4 cut(s) 969, 980, 1106, 1413
HpySE526I ACGT 3 cut(s) 96, 573, 1118
Hsp92II CATG 8 cut(s) 30, 41, 174, 260, 298, 745, 1096, 1240
Kzo9I GATC 7 cut(s) 157, 397, 451, 820, 1047, 1109, 1135
LmnI GCTCC 2 cut(s) 356, 848
Lsp1109I GCAGC 1 cut(s) 206
LweI GCATC 1 cut(s) 1301
MaeI CTAG 3 cut(s) 164, 824, 1034
MaeII ACGT 3 cut(s) 96, 573, 1118
MaeIII GTNAC 3 cut(s) 97, 404, 689
MalI GATC 7 cut(s) 159, 399, 453, 822, 1049, 1111, 1137
MboI GATC 7 cut(s) 157, 397, 451, 820, 1047, 1109, 1135
MfeI CAATTG 1 cut(s) 8
MflI RGATCY 5 cut(s) 397, 451, 820, 1109, 1135
MhlI GDGCHC 2 cut(s) 348, 710
MlsI TGGCCA 2 cut(s) 42, 216
MluCI AATT 2 cut(s) 8, 728
MluNI TGGCCA 2 cut(s) 42, 216
MlyI GAGTC 4 cut(s) 176, 370, 801, 1068
MmeI TCCRAC 2 cut(s) 826, 1411
Mox20I TGGCCA 2 cut(s) 42, 216
MscI TGGCCA 2 cut(s) 42, 216
MseI TTAA 2 cut(s) 1253, 1265
MslI CAYNNNNRTG 1 cut(s) 1404
Msp20I TGGCCA 2 cut(s) 42, 216
MspI CCGG 4 cut(s) 229, 402, 468, 1208
MspR9I CCNGG 7 cut(s) 230, 402, 438, 469, 834, 1182, 1209
MunI CAATTG 1 cut(s) 8
MvaI CCWGG 3 cut(s) 438, 834, 1182
MvnI CGCG 1 cut(s) 1232
MwoI GCNNNNNNNGC 2 cut(s) 365, 424
NciI CCSGG 4 cut(s) 230, 402, 469, 1209
NcoI CCATGG 2 cut(s) 37, 256
NdeII GATC 7 cut(s) 157, 397, 451, 820, 1047, 1109, 1135
NlaIII CATG 8 cut(s) 30, 41, 174, 260, 298, 745, 1096, 1240
NlaIV GGNNCC 2 cut(s) 358, 850
NmuCI GTSAC 2 cut(s) 404, 689
NruI TCGCGA 1 cut(s) 1232
NspI RCATGY 1 cut(s) 30
NspV TTCGAA 1 cut(s) 1122
OliI CACNNNNGTG 1 cut(s) 1404
PceI AGGCCT 1 cut(s) 828
PcsI WCGNNNNNNNCGW 1 cut(s) 774
PfeI GAWTC 3 cut(s) 85, 329, 748
PflFI GACNNNGTC 1 cut(s) 1360
PfoI TCCNGGA 1 cut(s) 228
PkrI GCNGC 2 cut(s) 196, 886
PleI GAGTC 4 cut(s) 175, 370, 800, 1068
PpsI GAGTC 4 cut(s) 175, 370, 800, 1068
Psp1406I AACGTT 1 cut(s) 1118
Psp6I CCWGG 3 cut(s) 436, 832, 1180
PspGI CCWGG 3 cut(s) 436, 832, 1180
PspN4I GGNNCC 2 cut(s) 358, 850
PsuI RGATCY 5 cut(s) 397, 451, 820, 1109, 1135
PsyI GACNNNGTC 1 cut(s) 1360
RruI TCGCGA 1 cut(s) 1232
RsaI GTAC 4 cut(s) 77, 483, 502, 616
RsaNI GTAC 4 cut(s) 76, 482, 501, 615
RseI CAYNNNNRTG 1 cut(s) 1404
SalI GTCGAC 1 cut(s) 1088
SaqAI TTAA 2 cut(s) 1253, 1265
SatI GCNGC 2 cut(s) 195, 885
Sau3AI GATC 7 cut(s) 157, 397, 451, 820, 1047, 1109, 1135
ScaI AGTACT 1 cut(s) 502
SchI GAGTC 4 cut(s) 176, 370, 801, 1068
ScrFI CCNGG 7 cut(s) 230, 402, 438, 469, 834, 1182, 1209
SduI GDGCHC 2 cut(s) 348, 710
SfaNI GCATC 1 cut(s) 1301
SfuI TTCGAA 1 cut(s) 1122
SmiMI CAYNNNNRTG 1 cut(s) 1404
SmlI CTYRAG 4 cut(s) 111, 496, 1001, 1300
SmoI CTYRAG 4 cut(s) 111, 496, 1001, 1300
Sse9I AATT 2 cut(s) 8, 728
SseBI AGGCCT 1 cut(s) 828
SsiI CCGC 5 cut(s) 137, 366, 885, 1070, 1127
SspMI CTAG 3 cut(s) 164, 824, 1034
StuI AGGCCT 1 cut(s) 828
StyD4I CCNGG 7 cut(s) 228, 400, 436, 467, 832, 1180, 1207
StyI CCWWGG 3 cut(s) 37, 61, 256
TaaI ACNGT 3 cut(s) 712, 1343, 1406
TaiI ACGT 3 cut(s) 99, 576, 1121
TaqI TCGA 6 cut(s) 316, 534, 768, 1089, 1122, 1346
TasI AATT 2 cut(s) 8, 728
TatI WGTACW 1 cut(s) 500
TauI GCSGC 1 cut(s) 887
TfiI GAWTC 3 cut(s) 85, 329, 748
Tru1I TTAA 2 cut(s) 1253, 1265
Tru9I TTAA 2 cut(s) 1253, 1265
TscAI CASTG 1 cut(s) 355
TseFI GTSAC 2 cut(s) 404, 689
TseI GCWGC 1 cut(s) 194
Tsp45I GTSAC 2 cut(s) 404, 689
TspDTI ATGAA 4 cut(s) 283, 646, 721, 1308
TspRI CASTG 1 cut(s) 355
Tth111I GACNNNGTC 1 cut(s) 1360
XapI RAATTY 1 cut(s) 728
XbaI TCTAGA 1 cut(s) 1033
XceI RCATGY 1 cut(s) 30
XmiI GTMKAC 1 cut(s) 1089
XspI CTAG 3 cut(s) 164, 824, 1034
ZrmI AGTACT 1 cut(s) 502
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.