pycom02g15530

1-aminocyclopropane-1-carboxylate synthase

Basic Information

Type: gene
Biological Identity
pyrus_communis
Chr2
Physical Location & Seq
Forward (+)
12349883 .. 12352194
2312 bp
Loading structure...
UTR
Exon/CDS
Intron
pycom02g15530.1

Sequence Viewer

Length: 1422 bp
ATGCACATGTTATCCAGAAACGCTACGTTCAACTCTCACGGCCAAGACTCCTCCTACTTCTTAGGCTGGCAAGAGTATGAGAAGAACCCCTACCATGAGGTCCACAACACAAACGGGATTATTCAGATGGGTCTTGCAGAAAATCAGCTCTGCTTTGATCTTCTGGAGTCATGGCTCGCTAAGAATCCAGACGCAGCTGCATTTAAGAAAAATGGAGAATCCATATTTGCAGAGCTTGCACTCTTCCAAGATTATCACGGCCTTCCCGCATTCAAAAAGGCATTGGTAGATTTCATGGCAGAAATCCGAGGGAACAAAGTGACCTTTGATCCCAATCACTTAGTCCTCACCGCCGGTGCAACTTCAGCCAATGAGACCCTCATCTTCTGCCTCGCTGACCCCGGTGAAGCTGTTCTTATTCCTACACCATACTACCCAGGATTTGATAGAGACCTCAAATGGCGAACTGGAGTCGAGATTGTACCCATTCACTGCACAAGCTCCAATGGCTTCCAAATTACTGAACCCGCTCTACAAGAAGCCTACCAAGAAGCCGAAAAACGCAATCTCAGAGTCAAAGGCGTATTGGTCACGAACCCATCAAACCCATTGGGGACCACAATGACCAGAAACGAACTCAACCTCCTCCTTTCCTTCGTTGAAGACAAAGGCATCCACCTTATTAGCGACGAAATTTACTCCGGCACAGCTTTTAGCTCCGCATCCTTTATAAGCGTCATGGAAGTTCTCAAAGATAGAAAATGTGATGAGAATACCGAAGTTTGGCAGCGAGTTCACGTTGTCTATAGCCTCTCTAAGGATCTTGGTCTTCCGGGTTTTCGAGTCGGGGCGATTTACTCCAACGACGACATGGTTGTGGCCGCTGCTACAAAAATGTCAAGCTTTGGACTTGTCTCTTCTCAAACTCAGCACCTTCTCTCCGCCATGCTATCCGACAAGAAACTTACTAAGAACTACATAGCCGAGAACCAAAAAAGACTCAAACAACGTCAGAAAAAGCTTGTCTCCGGCCTTCAGAAAGCCGGCATTAGCTGCCTCAAGGGCAATGCTGGCTTGTTCTGTTGGGTGGATATGAGCCACTTGCTTAGGTCCAACACCTTCGAAGCCGAAATGGAGCTTTGGAAAAAGATTGTATACGAAGTTCGCCTCAATATCTCTCCTGGATCGTCATGTCATTGCACGGAACCTGGTTGGTTTCGTGTCTGCTTTGCAAACTTGTCCGAGGAAACACTGGACTTGGCAATGCAGAGACTGAAGGCCTTTGTGGGGGAATATTACAACGTCCCCGACGTCACTGGCCGCAGCCAAAGCAGCCAATTAAGCCACTCGAGAAGACGGTCACTCACCAAGTGGGTTTTCCGGCTATCCTTCGACGACCGCAGCCCTATTCCTGGTCGATGA

Protein Analysis

474

Amino Acids

53.2

Weight (kDa)

6.9

Isoelectric Point (pI)

42.48

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Aminotran_1_2 PF00155 41 - 425 1.6e-103 Aminotransferase class I and II
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Orthologous Genes (Group: OG0012883)

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 731
AatII GACGTC 1 cut(s) 1314
AccBSI CCGCTC 1 cut(s) 530
AccI GTMKAC 1 cut(s) 1155
AciI CCGC 8 cut(s) 267, 351, 528, 720, 882, 942, 1321, 1399
AclWI GGATC 3 cut(s) 323, 828, 1192
AcoI YGGCCR 3 cut(s) 40, 879, 1318
AcsI RAATTY 1 cut(s) 693
AcuI CTGAAG 3 cut(s) 348, 1019, 1295
AcyI GRCGYC 1 cut(s) 1311
AdeI CACNNNGTG 1 cut(s) 1371
AfaI GTAC 1 cut(s) 483
AfiI CCNNNNNNNGG 4 cut(s) 783, 817, 1287, 1412
AflIII ACRYGT 1 cut(s) 6
AgsI TTSAA 3 cut(s) 31, 274, 662
AjnI CCWGG 4 cut(s) 436, 1180, 1207, 1411
AjuI GAANNNNNNNTTGG 2 cut(s) 1361, 1393
AloI GAACNNNNNNTCC 2 cut(s) 627, 659
Alw26I GTCTC 5 cut(s) 368, 444, 919, 1030, 1264
AlwI GGATC 3 cut(s) 323, 828, 1192
AlwNI CAGNNNCTG 1 cut(s) 1273
Ama87I CYCGRG 1 cut(s) 1348
AoxI GGCC 6 cut(s) 40, 259, 879, 1030, 1278, 1318
ApeKI GCWGC 8 cut(s) 194, 197, 787, 884, 1053, 1323, 1332, 1401
ApoI RAATTY 1 cut(s) 693
Asp700I GAANNNNTTC 1 cut(s) 411
AspS9I GGNCC 3 cut(s) 100, 615, 1110
AsuC2I CCSGG 2 cut(s) 402, 834
AsuHPI GGTGA 3 cut(s) 340, 416, 1357
AsuII TTCGAA 1 cut(s) 1122
AvaI CYCGRG 1 cut(s) 1348
AvaII GGWCC 3 cut(s) 100, 615, 1110
BarI GAAGNNNNNNTAC 2 cut(s) 74, 106
BbsI GAAGAC 3 cut(s) 669, 821, 1360
BbvI GCAGC 8 cut(s) 184, 206, 799, 871, 1040, 1335, 1344, 1413
BccI CCATC 2 cut(s) 121, 607
BceAI ACGGC 2 cut(s) 55, 274
BciT130I CCWGG 4 cut(s) 438, 1182, 1209, 1413
BcnI CCSGG 2 cut(s) 402, 834
BcoDI GTCTC 5 cut(s) 368, 444, 919, 1030, 1264
BfmI CTRYAG 1 cut(s) 805
BglI GCCNNNNNGGC 1 cut(s) 1062
Bme1390I CCNGG 6 cut(s) 402, 438, 834, 1182, 1209, 1413
Bme18I GGWCC 3 cut(s) 100, 615, 1110
BmeT110I CYCGRG 1 cut(s) 1348
BmgT120I GGNCC 3 cut(s) 100, 615, 1110
BmiI GGNNCC 2 cut(s) 616, 1206
BmrFI CCNGG 6 cut(s) 402, 438, 834, 1182, 1209, 1413
BmsI GCATC 2 cut(s) 681, 731
BpiI GAAGAC 3 cut(s) 669, 821, 1360
BpmI CTGGAG 2 cut(s) 185, 489
Bpu10I CCTNAGC 1 cut(s) 1106
Bpu14I TTCGAA 1 cut(s) 1122
BpuEI CTTGAG 1 cut(s) 1043
BpuMI CCSGG 2 cut(s) 402, 834
BsaBI GATNNNNATC 1 cut(s) 333
BsaHI GRCGYC 1 cut(s) 1311
BsaI GGTCTC 2 cut(s) 368, 444
BsaJI CCNNGG 4 cut(s) 307, 400, 436, 1242
BsaXI ACNNNNNCTCC 4 cut(s) 627, 657, 923, 953
Bsc4I CCNNNNNNNGG 4 cut(s) 783, 817, 1287, 1412
Bse118I RCCGGY 2 cut(s) 353, 1043
Bse1I ACTGG 3 cut(s) 472, 1257, 1321
Bse3DI GCAATG 3 cut(s) 1072, 1195, 1269
Bse8I GATNNNNATC 1 cut(s) 333
BseBI CCWGG 4 cut(s) 438, 1182, 1209, 1413
BseDI CCNNGG 4 cut(s) 307, 400, 436, 1242
BseGI GGATG 2 cut(s) 672, 722
BseJI GATNNNNATC 1 cut(s) 333
BseLI CCNNNNNNNGG 4 cut(s) 783, 817, 1287, 1412
BseMI GCAATG 3 cut(s) 1072, 1195, 1269
BseMII CTCAG 2 cut(s) 583, 941
BseNI ACTGG 3 cut(s) 472, 1257, 1321
BseRI GAGGAG 2 cut(s) 40, 635
BseXI GCAGC 8 cut(s) 184, 206, 799, 871, 1040, 1335, 1344, 1413
BsgI GTGCAG 1 cut(s) 478
Bsh1285I CGRYCG 1 cut(s) 1399
BshFI GGCC 6 cut(s) 42, 261, 881, 1032, 1280, 1320
BsiEI CGRYCG 1 cut(s) 1399
BsiHKCI CYCGRG 1 cut(s) 1348
BsiSI CCGG 7 cut(s) 354, 402, 702, 833, 1029, 1044, 1381
BslFI GGGAC 2 cut(s) 628, 1289
BslI CCNNNNNNNGG 4 cut(s) 783, 817, 1287, 1412
BsmAI GTCTC 5 cut(s) 368, 444, 919, 1030, 1264
BsmFI GGGAC 2 cut(s) 628, 1289
BsmI GAATGC 1 cut(s) 269
BsnI GGCC 6 cut(s) 42, 261, 881, 1032, 1280, 1320
Bso31I GGTCTC 2 cut(s) 368, 444
BsoBI CYCGRG 1 cut(s) 1348
Bsp119I TTCGAA 1 cut(s) 1122
Bsp143I GATC 4 cut(s) 157, 328, 820, 1184
BspACI CCGC 8 cut(s) 267, 351, 528, 720, 882, 942, 1321, 1399
BspANI GGCC 6 cut(s) 42, 261, 881, 1032, 1280, 1320
BspCNI CTCAG 2 cut(s) 582, 940
BspLI GGNNCC 2 cut(s) 616, 1206
BspPI GGATC 3 cut(s) 323, 828, 1192
BspT104I TTCGAA 1 cut(s) 1122
BspTNI GGTCTC 2 cut(s) 368, 444
BsrBI CCGCTC 1 cut(s) 530
BsrDI GCAATG 3 cut(s) 1072, 1195, 1269
BsrFI RCCGGY 2 cut(s) 353, 1043
BsrI ACTGG 3 cut(s) 472, 1257, 1321
BssAI RCCGGY 2 cut(s) 353, 1043
BssECI CCNNGG 4 cut(s) 307, 400, 436, 1242
BssMI GATC 4 cut(s) 157, 328, 820, 1184
BssNAI GTATAC 1 cut(s) 1156
BssNI GRCGYC 1 cut(s) 1311
Bst1107I GTATAC 1 cut(s) 1156
Bst2UI CCWGG 4 cut(s) 438, 1182, 1209, 1413
Bst4CI ACNGT 1 cut(s) 1359
Bst6I CTCTTC 2 cut(s) 248, 922
BstACI GRCGYC 1 cut(s) 1311
BstAPI GCANNNNNTGC 2 cut(s) 236, 1053
BstBI TTCGAA 1 cut(s) 1122
BstC8I GCNNGC 5 cut(s) 68, 177, 237, 1045, 1072
BstDEI CTNAG 8 cut(s) 61, 180, 340, 569, 816, 927, 969, 1106
BstENI CCTNNNNNAGG 1 cut(s) 815
BstF5I GGATG 2 cut(s) 672, 722
BstKTI GATC 4 cut(s) 160, 331, 823, 1187
BstMAI GTCTC 5 cut(s) 368, 444, 919, 1030, 1264
BstMBI GATC 4 cut(s) 157, 328, 820, 1184
BstMCI CGRYCG 1 cut(s) 1399
BstMWI GCNNNNNNNGC 9 cut(s) 236, 365, 507, 1053, 1062, 1071, 1329, 1332, 1341
BstNI CCWGG 4 cut(s) 438, 1182, 1209, 1413
BstNSI RCATGY 1 cut(s) 10
BstSCI CCNGG 6 cut(s) 400, 436, 832, 1180, 1207, 1411
BstSFI CTRYAG 1 cut(s) 805
BstV1I GCAGC 8 cut(s) 184, 206, 799, 871, 1040, 1335, 1344, 1413
BstV2I GAAGAC 3 cut(s) 669, 821, 1360
BstX2I RGATCY 1 cut(s) 820
BstYI RGATCY 1 cut(s) 820
BstZ17I GTATAC 1 cut(s) 1156
BsuRI GGCC 6 cut(s) 42, 261, 881, 1032, 1280, 1320
BtsCI GGATG 2 cut(s) 672, 722
BtsI GCAGTG 1 cut(s) 490
BtsIMutI CAGTG 3 cut(s) 490, 1250, 1314
Cac8I GCNNGC 5 cut(s) 68, 177, 237, 1045, 1072
CaiI CAGNNNCTG 1 cut(s) 1273
Cfr10I RCCGGY 2 cut(s) 353, 1043
Cfr13I GGNCC 3 cut(s) 100, 615, 1110
CseI GACGC 2 cut(s) 200, 724
CsiI ACCWGGT 1 cut(s) 1207
Csp6I GTAC 1 cut(s) 482
CviAII CATG 8 cut(s) 7, 95, 171, 295, 739, 871, 946, 1191
CviQI GTAC 1 cut(s) 482
DdeI CTNAG 8 cut(s) 61, 180, 340, 569, 816, 927, 969, 1106
DpnI GATC 4 cut(s) 159, 330, 822, 1186
DpnII GATC 4 cut(s) 157, 328, 820, 1184
DraIII CACNNNGTG 1 cut(s) 1371
EaeI YGGCCR 3 cut(s) 40, 879, 1318
Eam1104I CTCTTC 2 cut(s) 248, 922
EarI CTCTTC 2 cut(s) 248, 922
EciI GGCGGA 1 cut(s) 931
Eco147I AGGCCT 1 cut(s) 1280
Eco31I GGTCTC 2 cut(s) 368, 444
Eco47I GGWCC 3 cut(s) 100, 615, 1110
Eco57I CTGAAG 3 cut(s) 348, 1019, 1295
Eco88I CYCGRG 1 cut(s) 1348
EcoNI CCTNNNNNAGG 1 cut(s) 815
EcoRII CCWGG 4 cut(s) 436, 1180, 1207, 1411
FaeI CATG 8 cut(s) 10, 98, 174, 298, 742, 874, 949, 1194
FalI AAGNNNNNCTT 2 cut(s) 399, 431
FaqI GGGAC 2 cut(s) 628, 1289
FatI CATG 8 cut(s) 6, 94, 170, 294, 738, 870, 945, 1190
FauI CCCGC 2 cut(s) 274, 535
FblI GTMKAC 1 cut(s) 1155
FokI GGATG 2 cut(s) 659, 709
GsuI CTGGAG 2 cut(s) 185, 489
HaeIII GGCC 6 cut(s) 42, 261, 881, 1032, 1280, 1320
HapII CCGG 7 cut(s) 354, 402, 702, 833, 1029, 1044, 1381
HgaI GACGC 2 cut(s) 200, 724
Hin1I GRCGYC 1 cut(s) 1311
Hin1II CATG 8 cut(s) 10, 98, 174, 298, 742, 874, 949, 1194
HindIII AAGCTT 2 cut(s) 901, 1019
HinfI GANTC 8 cut(s) 47, 167, 184, 218, 471, 573, 843, 999
HpaII CCGG 7 cut(s) 354, 402, 702, 833, 1029, 1044, 1381
HphI GGTGA 3 cut(s) 340, 416, 1357
Hpy166II GTNNAC 3 cut(s) 103, 796, 1156
Hpy188I TCNGA 7 cut(s) 126, 308, 572, 955, 1014, 1038, 1243
Hpy188III TCNNGA 6 cut(s) 15, 164, 188, 475, 592, 1350
Hpy8I GTNNAC 3 cut(s) 103, 796, 1156
Hpy99I CGWCG 4 cut(s) 692, 869, 1313, 1397
HpyAV CCTTC 7 cut(s) 272, 664, 944, 1043, 1129, 1270, 1399
HpyCH4III ACNGT 1 cut(s) 1359
HpyCH4IV ACGT 5 cut(s) 26, 798, 1009, 1302, 1311
HpyF10VI GCNNNNNNNGC 9 cut(s) 236, 365, 507, 1053, 1062, 1071, 1329, 1332, 1341
HpyF3I CTNAG 8 cut(s) 61, 180, 340, 569, 816, 927, 969, 1106
HpySE526I ACGT 5 cut(s) 26, 798, 1009, 1302, 1311
Hsp92I GRCGYC 1 cut(s) 1311
Hsp92II CATG 8 cut(s) 10, 98, 174, 298, 742, 874, 949, 1194
KroI GCCGGC 1 cut(s) 1043
KroNI GCCGGC 1 cut(s) 1045
Kzo9I GATC 4 cut(s) 157, 328, 820, 1184
LmnI GCTCC 3 cut(s) 506, 722, 1135
Lsp1109I GCAGC 8 cut(s) 184, 206, 799, 871, 1040, 1335, 1344, 1413
LweI GCATC 2 cut(s) 681, 731
MabI ACCWGGT 1 cut(s) 1207
MaeII ACGT 5 cut(s) 26, 798, 1009, 1302, 1311
MaeIII GTNAC 4 cut(s) 319, 589, 1312, 1359
MalI GATC 4 cut(s) 159, 330, 822, 1186
MbiI CCGCTC 1 cut(s) 530
MboI GATC 4 cut(s) 157, 328, 820, 1184
MboII GAAGA 8 cut(s) 94, 152, 235, 376, 674, 821, 909, 1365
MflI RGATCY 1 cut(s) 820
MluCI AATT 3 cut(s) 516, 693, 1337
MlyI GAGTC 6 cut(s) 41, 176, 480, 582, 852, 993
MmeI TCCRAC 3 cut(s) 885, 978, 1137
MroNI GCCGGC 1 cut(s) 1043
MroXI GAANNNNTTC 1 cut(s) 411
MseI TTAA 2 cut(s) 204, 1340
MslI CAYNNNNRTG 1 cut(s) 875
MspA1I CMGCKG 2 cut(s) 197, 884
MspI CCGG 7 cut(s) 354, 402, 702, 833, 1029, 1044, 1381
MspR9I CCNGG 6 cut(s) 402, 438, 834, 1182, 1209, 1413
Mva1269I GAATGC 1 cut(s) 269
MvaI CCWGG 4 cut(s) 438, 1182, 1209, 1413
MwoI GCNNNNNNNGC 9 cut(s) 236, 365, 507, 1053, 1062, 1071, 1329, 1332, 1341
NaeI GCCGGC 1 cut(s) 1045
NciI CCSGG 2 cut(s) 402, 834
NdeII GATC 4 cut(s) 157, 328, 820, 1184
NgoMIV GCCGGC 1 cut(s) 1043
NlaIII CATG 8 cut(s) 10, 98, 174, 298, 742, 874, 949, 1194
NlaIV GGNNCC 2 cut(s) 616, 1206
NmeAIII GCCGAG 1 cut(s) 1009
NmuCI GTSAC 4 cut(s) 319, 589, 1312, 1359
NspI RCATGY 1 cut(s) 10
NspV TTCGAA 1 cut(s) 1122
PaeR7I CTCGAG 1 cut(s) 1348
PceI AGGCCT 1 cut(s) 1280
PciI ACATGT 1 cut(s) 6
PcsI WCGNNNNNNNCGW 1 cut(s) 1308
PctI GAATGC 1 cut(s) 269
PdiI GCCGGC 1 cut(s) 1045
PdmI GAANNNNTTC 1 cut(s) 411
PfeI GAWTC 2 cut(s) 184, 218
PfoI TCCNGGA 1 cut(s) 1180
PleI GAGTC 6 cut(s) 41, 175, 479, 581, 851, 993
PpsI GAGTC 6 cut(s) 41, 175, 479, 581, 851, 993
PscI ACATGT 1 cut(s) 6
PsiI TTATAA 1 cut(s) 731
Psp6I CCWGG 4 cut(s) 436, 1180, 1207, 1411
PspGI CCWGG 4 cut(s) 436, 1180, 1207, 1411
PspN4I GGNNCC 2 cut(s) 616, 1206
PspPI GGNCC 3 cut(s) 100, 615, 1110
PsrI GAACNNNNNNTAC 4 cut(s) 516, 548, 1146, 1178
PstNI CAGNNNCTG 1 cut(s) 1273
PsuI RGATCY 1 cut(s) 820
PvuII CAGCTG 1 cut(s) 197
RsaI GTAC 1 cut(s) 483
RsaNI GTAC 1 cut(s) 482
RseI CAYNNNNRTG 1 cut(s) 875
SaqAI TTAA 2 cut(s) 204, 1340
Sau3AI GATC 4 cut(s) 157, 328, 820, 1184
Sau96I GGNCC 3 cut(s) 100, 615, 1110
SchI GAGTC 6 cut(s) 41, 176, 480, 582, 852, 993
ScrFI CCNGG 6 cut(s) 402, 438, 834, 1182, 1209, 1413
SexAI ACCWGGT 1 cut(s) 1207
SfaNI GCATC 2 cut(s) 681, 731
SfcI CTRYAG 1 cut(s) 805
Sfr274I CTCGAG 1 cut(s) 1348
SfuI TTCGAA 1 cut(s) 1122
SgrAI CRCCGGYG 1 cut(s) 353
SinI GGWCC 3 cut(s) 100, 615, 1110
SlaI CTCGAG 1 cut(s) 1348
SmiMI CAYNNNNRTG 1 cut(s) 875
SmlI CTYRAG 2 cut(s) 1058, 1348
SmoI CTYRAG 2 cut(s) 1058, 1348
Sse9I AATT 3 cut(s) 516, 693, 1337
SseBI AGGCCT 1 cut(s) 1280
SsiI CCGC 8 cut(s) 267, 351, 528, 720, 882, 942, 1321, 1399
SspI AATATT 1 cut(s) 1295
StuI AGGCCT 1 cut(s) 1280
StyD4I CCNGG 6 cut(s) 400, 436, 832, 1180, 1207, 1411
TaaI ACNGT 1 cut(s) 1359
TaiI ACGT 5 cut(s) 29, 801, 1012, 1305, 1314
TaqI TCGA 6 cut(s) 474, 841, 1122, 1349, 1392, 1417
TasI AATT 3 cut(s) 516, 693, 1337
TauI GCSGC 2 cut(s) 884, 1323
TfiI GAWTC 2 cut(s) 184, 218
Tru1I TTAA 2 cut(s) 204, 1340
Tru9I TTAA 2 cut(s) 204, 1340
TscAI CASTG 3 cut(s) 497, 1257, 1321
TseFI GTSAC 4 cut(s) 319, 589, 1312, 1359
TseI GCWGC 8 cut(s) 194, 197, 787, 884, 1053, 1323, 1332, 1401
Tsp45I GTSAC 4 cut(s) 319, 589, 1312, 1359
TspDTI ATGAA 1 cut(s) 283
TspGWI ACGGA 1 cut(s) 1217
TspRI CASTG 3 cut(s) 497, 1257, 1321
VpaK11BI GGWCC 3 cut(s) 100, 615, 1110
XagI CCTNNNNNAGG 1 cut(s) 815
XapI RAATTY 1 cut(s) 693
XceI RCATGY 1 cut(s) 10
XcmI CCANNNNNNNNNTGG 1 cut(s) 868
XhoI CTCGAG 1 cut(s) 1348
XmiI GTMKAC 1 cut(s) 1155
XmnI GAANNNNTTC 1 cut(s) 411
ZraI GACGTC 1 cut(s) 1312
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.