AT3G49700

1-aminocyclopropane-1-carboxylate synthase

Basic Information

Type: gene
Biological Identity
arabidopsis_thaliana
3
Physical Location & Seq
Reverse (-)
18434449 .. 18436141
1693 bp
Loading structure...
UTR
Exon/CDS
Intron
AT3G49700.1

Sequence Viewer

Length: 1413 bp
ATGAAACAACTGTCGAGAAAAGTGACAAGCAATGCTCATGGACAAGACTCTTCCTACTTCTTGGGATGGGAAGAATACGAGAAGAACCCTTACGACGAAATCAAGAACCCTAATGGGATTATTCAAATGGGTCTTGCCGAAAATCAGCTATGTTTTGATCTCATAGAGACATGGTTAGCTAAGAATCCGGACGCAGCCGGACTAAAAAAGGACGGCCAATCCATTTTCAAAGAGCTTGCTCTCTTTCAAGACTATCATGGCCTACCCGAATTCAAGAAAGCTTTGGCAGAGTTTATGGAGGAAATCAGAGGAAATAGAGTAACATTTGATCCAAGCAAGATTGTCCTAGCTGCTGGTTCAACATCTGCCAACGAAACTCTCATGTTTTGTCTCGCCGAACCCGGGGACGCTTTCCTTTTACCAACTCCTTACTATCCAGGATTCGATAGAGACTTGAAATGGAGAACGGGAGCAGAGATCGTACCTATTCATTGCTCAAGCTCTAATGGGTTCCAAATAACAGAGTCAGCTCTTCAACAAGCTTATCAACAAGCTCAAAAGCTTGATCTTAAGGTCAAAGGAGTTCTTGTTACCAACCCGTCTAACCCTCTTGGCACAATGTTGACCAGAAGAGAACTTAACCTTCTCGTTGACTTCATTACTTCCAAAAACATTCATCTCATAAGCGACGAGATCTATTCAGGTACCGTTTTTGGGTTTGAACAGTTTGTAAGTGTCATGGATGTCTTAAAAGACAAGAACCTCGAGAACAGCGAAGTCTCCAAACGAGTTCATATTGTTTATAGTCTTTCCAAAGATCTCGGTTTACCAGGTTTTCGCGTAGGAGCAATTTACTCCAACGACGAAATGGTTGTTTCCGCTGCAACAAAAATGTCAAGTTTCGGTCTCGTGTCTTCTCAAACACAGTACCTTCTCTCTGCATTGCTTTCAGACAAGAAGTTCACAAGTACATACCTCGACGAAAACCAGAAAAGACTCAAGATTCGTCAGAAGAAACTCGTGTCCGGTCTAGAAGCTGCAGGGATTACTTGTCTTAAAAGCAACGCTGGTTTGTTCTGTTGGGTTGACATGAGACATCTTTTGGACACAAACACATTCGAAGCAGAACTTGAGCTATGGAAGAAGATTGTATATGACGTCAAGCTGAATATTTCACCTGGTTCATCGTGCCATTGTACTGAACCGGGTTGGTTTAGGGTTTGTTTCGCCAACATGAGTGAAGATACGCTTGATTTGGCGATGAAGAGGCTCAAAGAGTACGTAGAGTCAACAGATAGTAGAAGAGTGATTTCAAAAAGCAGTCATGATAGGATCAAGAGTTTGAGGAAGAGAACTGTCTCCAACTGGGTTTTCCGGGTTTCATGGACCGACCGTGTACCTGATGAACGATGA

Protein Analysis

470

Amino Acids

53.17

Weight (kDa)

6.73

Isoelectric Point (pI)

36.3

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Aminotran_1_2 PF00155 41 - 424 6.4e-104 Aminotransferase class I and II
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Orthologous Genes (Group: OG0012883)

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AatII GACGTC 1 cut(s) 1161
Acc65I GGTACC 1 cut(s) 704
AccB1I GGYRCC 1 cut(s) 704
AccII CGCG 1 cut(s) 840
AccIII TCCGGA 1 cut(s) 187
AciI CCGC 1 cut(s) 879
AclWI GGATC 2 cut(s) 323, 1340
AcoI YGGCCR 1 cut(s) 214
AcsI RAATTY 1 cut(s) 269
AcyI GRCGYC 1 cut(s) 1158
AfaI GTAC 7 cut(s) 483, 706, 929, 970, 1198, 1280, 1398
AfiI CCNNNNNNNGG 2 cut(s) 402, 714
AflII CTTAAG 1 cut(s) 569
AgsI TTSAA 9 cut(s) 125, 229, 248, 274, 360, 457, 536, 722, 1314
AjnI CCWGG 3 cut(s) 436, 829, 1177
AjuI GAANNNNNNNTTGG 2 cut(s) 1355, 1387
Alw26I GTCTC 7 cut(s) 161, 395, 444, 784, 911, 1087, 1363
AlwI GGATC 2 cut(s) 323, 1340
Ama87I CYCGRG 2 cut(s) 401, 764
Aor13HI TCCGGA 1 cut(s) 187
AoxI GGCC 2 cut(s) 214, 259
ApeKI GCWGC 4 cut(s) 194, 350, 881, 1037
ApoI RAATTY 1 cut(s) 269
ArsI GACNNNNNNTTYG 2 cut(s) 987, 1019
Asp718I GGTACC 1 cut(s) 704
AspS9I GGNCC 1 cut(s) 1386
AsuC2I CCSGG 4 cut(s) 402, 403, 1206, 1376
AsuHPI GGTGA 1 cut(s) 1167
AsuII TTCGAA 1 cut(s) 1119
AvaI CYCGRG 2 cut(s) 401, 764
AvaII GGWCC 1 cut(s) 1386
BanI GGYRCC 1 cut(s) 704
BarI GAAGNNNNNNTAC 2 cut(s) 74, 106
BauI CACGAG 2 cut(s) 908, 1019
BbsI GAAGAC 1 cut(s) 906
BbvI GCAGC 4 cut(s) 206, 337, 868, 1024
BccI CCATC 1 cut(s) 60
BceAI ACGGC 1 cut(s) 229
BciT130I CCWGG 3 cut(s) 438, 831, 1179
BcnI CCSGG 4 cut(s) 402, 403, 1206, 1376
BcoDI GTCTC 7 cut(s) 161, 395, 444, 784, 911, 1087, 1363
BfaI CTAG 2 cut(s) 347, 1031
BfmI CTRYAG 1 cut(s) 1038
BfrI CTTAAG 1 cut(s) 569
BglII AGATCT 2 cut(s) 693, 817
BisI GCNGC 4 cut(s) 195, 351, 882, 1038
BlsI GCNGC 4 cut(s) 196, 352, 883, 1039
Bme1390I CCNGG 7 cut(s) 402, 403, 438, 831, 1179, 1206, 1376
Bme18I GGWCC 1 cut(s) 1386
BmeT110I CYCGRG 2 cut(s) 401, 764
BmgT120I GGNCC 1 cut(s) 1386
BmiI GGNNCC 2 cut(s) 512, 706
BmrFI CCNGG 7 cut(s) 402, 403, 438, 831, 1179, 1206, 1376
BmrI ACTGGG 1 cut(s) 1375
BmuI ACTGGG 1 cut(s) 1375
BpiI GAAGAC 1 cut(s) 906
Bpu14I TTCGAA 1 cut(s) 1119
BpuEI CTTGAG 3 cut(s) 481, 983, 1151
BpuMI CCSGG 4 cut(s) 402, 403, 1206, 1376
BsaAI YACGTR 1 cut(s) 1282
BsaHI GRCGYC 1 cut(s) 1158
BsaI GGTCTC 1 cut(s) 911
BsaJI CCNNGG 2 cut(s) 401, 402
BsaWI WCCGGW 2 cut(s) 187, 1025
BsaXI ACNNNNNCTCC 2 cut(s) 573, 603
Bsc4I CCNNNNNNNGG 2 cut(s) 402, 714
Bse1I ACTGG 1 cut(s) 1370
Bse3DI GCAATG 3 cut(s) 37, 490, 941
BseAI TCCGGA 1 cut(s) 187
BseBI CCWGG 3 cut(s) 438, 831, 1179
BseDI CCNNGG 2 cut(s) 401, 402
BseGI GGATG 2 cut(s) 71, 748
BseLI CCNNNNNNNGG 2 cut(s) 402, 714
BseMI GCAATG 3 cut(s) 37, 490, 941
BseNI ACTGG 1 cut(s) 1370
BseXI GCAGC 4 cut(s) 206, 337, 868, 1024
Bsh1236I CGCG 1 cut(s) 840
Bsh1285I CGRYCG 1 cut(s) 1393
BshFI GGCC 2 cut(s) 216, 261
BshNI GGYRCC 1 cut(s) 704
BsiEI CGRYCG 1 cut(s) 1393
BsiHKCI CYCGRG 2 cut(s) 401, 764
BsiSI CCGG 6 cut(s) 188, 198, 402, 1026, 1205, 1375
BslFI GGGAC 1 cut(s) 419
BslI CCNNNNNNNGG 2 cut(s) 402, 714
BsmAI GTCTC 7 cut(s) 161, 395, 444, 784, 911, 1087, 1363
BsmFI GGGAC 1 cut(s) 419
BsnI GGCC 2 cut(s) 216, 261
Bso31I GGTCTC 1 cut(s) 911
BsoBI CYCGRG 2 cut(s) 401, 764
Bsp119I TTCGAA 1 cut(s) 1119
Bsp13I TCCGGA 1 cut(s) 187
Bsp143I GATC 7 cut(s) 157, 328, 477, 565, 693, 817, 1332
BspACI CCGC 1 cut(s) 879
BspANI GGCC 2 cut(s) 216, 261
BspEI TCCGGA 1 cut(s) 187
BspFNI CGCG 1 cut(s) 840
BspHI TCATGA 1 cut(s) 1324
BspLI GGNNCC 2 cut(s) 512, 706
BspMAI CTGCAG 1 cut(s) 1042
BspPI GGATC 2 cut(s) 323, 1340
BspQI GCTCTTC 1 cut(s) 537
BspT104I TTCGAA 1 cut(s) 1119
BspT107I GGYRCC 1 cut(s) 704
BspTI CTTAAG 1 cut(s) 569
BspTNI GGTCTC 1 cut(s) 911
BsrDI GCAATG 3 cut(s) 37, 490, 941
BsrI ACTGG 1 cut(s) 1370
BssECI CCNNGG 2 cut(s) 401, 402
BssMI GATC 7 cut(s) 157, 328, 477, 565, 693, 817, 1332
BssNI GRCGYC 1 cut(s) 1158
BssSI CACGAG 2 cut(s) 908, 1019
Bst2BI CACGAG 2 cut(s) 908, 1019
Bst2UI CCWGG 3 cut(s) 438, 831, 1179
Bst4CI ACNGT 6 cut(s) 12, 709, 726, 927, 1357, 1394
Bst6I CTCTTC 6 cut(s) 55, 537, 625, 1259, 1297, 1343
BstACI GRCGYC 1 cut(s) 1158
BstAFI CTTAAG 1 cut(s) 569
BstBAI YACGTR 1 cut(s) 1282
BstBI TTCGAA 1 cut(s) 1119
BstC8I GCNNGC 1 cut(s) 237
BstDEI CTNAG 1 cut(s) 180
BstF5I GGATG 2 cut(s) 71, 748
BstFNI CGCG 1 cut(s) 840
BstKTI GATC 7 cut(s) 160, 331, 480, 568, 696, 820, 1335
BstMAI GTCTC 7 cut(s) 161, 395, 444, 784, 911, 1087, 1363
BstMBI GATC 7 cut(s) 157, 328, 477, 565, 693, 817, 1332
BstMCI CGRYCG 1 cut(s) 1393
BstNI CCWGG 3 cut(s) 438, 831, 1179
BstSCI CCNGG 7 cut(s) 400, 401, 436, 829, 1177, 1204, 1374
BstSFI CTRYAG 1 cut(s) 1038
BstSNI TACGTA 1 cut(s) 1282
BstUI CGCG 1 cut(s) 840
BstV1I GCAGC 4 cut(s) 206, 337, 868, 1024
BstV2I GAAGAC 1 cut(s) 906
BstX2I RGATCY 2 cut(s) 693, 817
BstYI RGATCY 2 cut(s) 693, 817
BsuRI GGCC 2 cut(s) 216, 261
BtgZI GCGATG 1 cut(s) 1274
BtsCI GGATG 2 cut(s) 71, 748
Cac8I GCNNGC 1 cut(s) 237
CciI TCATGA 1 cut(s) 1324
Cfr13I GGNCC 1 cut(s) 1386
Cfr9I CCCGGG 1 cut(s) 401
CseI GACGC 2 cut(s) 200, 416
CsiI ACCWGGT 2 cut(s) 829, 1177
Csp6I GTAC 7 cut(s) 482, 705, 928, 969, 1197, 1279, 1397
CviAII CATG 9 cut(s) 38, 171, 257, 382, 739, 1090, 1234, 1325, 1383
CviQI GTAC 7 cut(s) 482, 705, 928, 969, 1197, 1279, 1397
DdeI CTNAG 1 cut(s) 180
DpnI GATC 7 cut(s) 159, 330, 479, 567, 695, 819, 1334
DpnII GATC 7 cut(s) 157, 328, 477, 565, 693, 817, 1332
EaeI YGGCCR 1 cut(s) 214
Eam1104I CTCTTC 6 cut(s) 55, 537, 625, 1259, 1297, 1343
EarI CTCTTC 6 cut(s) 55, 537, 625, 1259, 1297, 1343
Eco105I TACGTA 1 cut(s) 1282
Eco31I GGTCTC 1 cut(s) 911
Eco47I GGWCC 1 cut(s) 1386
Eco88I CYCGRG 2 cut(s) 401, 764
EcoRI GAATTC 1 cut(s) 269
EcoRII CCWGG 3 cut(s) 436, 829, 1177
FaeI CATG 9 cut(s) 41, 174, 260, 385, 742, 1093, 1237, 1328, 1386
FalI AAGNNNNNCTT 6 cut(s) 570, 602, 1113, 1145, 1233, 1265
FaqI GGGAC 1 cut(s) 419
FatI CATG 9 cut(s) 37, 170, 256, 381, 738, 1089, 1233, 1324, 1382
Fnu4HI GCNGC 4 cut(s) 195, 351, 882, 1038
FokI GGATG 2 cut(s) 78, 755
Fsp4HI GCNGC 4 cut(s) 195, 351, 882, 1038
FspBI CTAG 2 cut(s) 347, 1031
GluI GCNGC 4 cut(s) 195, 351, 882, 1038
HaeIII GGCC 2 cut(s) 216, 261
HapII CCGG 6 cut(s) 188, 198, 402, 1026, 1205, 1375
HgaI GACGC 2 cut(s) 200, 416
Hin1I GRCGYC 1 cut(s) 1158
Hin1II CATG 9 cut(s) 41, 174, 260, 385, 742, 1093, 1237, 1328, 1386
HincII GTYRAC 4 cut(s) 624, 652, 1087, 1290
HindII GTYRAC 4 cut(s) 624, 652, 1087, 1290
HindIII AAGCTT 3 cut(s) 279, 540, 560
HinfI GANTC 7 cut(s) 47, 184, 441, 524, 996, 1003, 1286
HpaII CCGG 6 cut(s) 188, 198, 402, 1026, 1205, 1375
HphI GGTGA 1 cut(s) 1167
Hpy166II GTNNAC 7 cut(s) 624, 652, 827, 963, 1087, 1290, 1397
Hpy188I TCNGA 3 cut(s) 308, 952, 1011
Hpy8I GTNNAC 7 cut(s) 624, 652, 827, 963, 1087, 1290, 1397
Hpy99I CGWCG 4 cut(s) 98, 692, 866, 983
HpyAV CCTTC 2 cut(s) 653, 941
HpyCH4III ACNGT 6 cut(s) 12, 709, 726, 927, 1357, 1394
HpyCH4IV ACGT 2 cut(s) 1158, 1281
HpyCH4V TGCA 3 cut(s) 884, 941, 1040
HpyF3I CTNAG 1 cut(s) 180
HpySE526I ACGT 2 cut(s) 1158, 1281
Hsp92I GRCGYC 1 cut(s) 1158
Hsp92II CATG 9 cut(s) 41, 174, 260, 385, 742, 1093, 1237, 1328, 1386
Kpn2I TCCGGA 1 cut(s) 187
KpnI GGTACC 1 cut(s) 708
Kzo9I GATC 7 cut(s) 157, 328, 477, 565, 693, 817, 1332
LguI GCTCTTC 1 cut(s) 537
LmnI GCTCC 2 cut(s) 470, 845
Lsp1109I GCAGC 4 cut(s) 206, 337, 868, 1024
MabI ACCWGGT 2 cut(s) 829, 1177
MaeI CTAG 2 cut(s) 347, 1031
MaeII ACGT 2 cut(s) 1158, 1281
MaeIII GTNAC 3 cut(s) 22, 319, 589
MalI GATC 7 cut(s) 159, 330, 479, 567, 695, 819, 1334
MboI GATC 7 cut(s) 157, 328, 477, 565, 693, 817, 1332
MflI RGATCY 2 cut(s) 693, 817
MluCI AATT 2 cut(s) 269, 849
MlyI GAGTC 4 cut(s) 41, 533, 990, 1295
MmeI TCCRAC 2 cut(s) 882, 1386
MnlI CCTC 7 cut(s) 292, 302, 618, 773, 986, 1260, 1338
MroI TCCGGA 1 cut(s) 187
MseI TTAA 4 cut(s) 570, 639, 749, 1056
MspA1I CMGCKG 1 cut(s) 881
MspCI CTTAAG 1 cut(s) 569
MspI CCGG 6 cut(s) 188, 198, 402, 1026, 1205, 1375
MspR9I CCNGG 7 cut(s) 402, 403, 438, 831, 1179, 1206, 1376
MvaI CCWGG 3 cut(s) 438, 831, 1179
MvnI CGCG 1 cut(s) 840
NciI CCSGG 4 cut(s) 402, 403, 1206, 1376
NdeII GATC 7 cut(s) 157, 328, 477, 565, 693, 817, 1332
NlaIII CATG 9 cut(s) 41, 174, 260, 385, 742, 1093, 1237, 1328, 1386
NlaIV GGNNCC 2 cut(s) 512, 706
NmuCI GTSAC 1 cut(s) 22
NspV TTCGAA 1 cut(s) 1119
PaeR7I CTCGAG 1 cut(s) 764
PagI TCATGA 1 cut(s) 1324
PciSI GCTCTTC 1 cut(s) 537
PcsI WCGNNNNNNNCGW 1 cut(s) 771
PfeI GAWTC 3 cut(s) 184, 441, 1003
PfoI TCCNGGA 1 cut(s) 436
PkrI GCNGC 4 cut(s) 196, 352, 883, 1039
PleI GAGTC 4 cut(s) 41, 532, 990, 1294
PpsI GAGTC 4 cut(s) 41, 532, 990, 1294
Ppu21I YACGTR 1 cut(s) 1282
Psp6I CCWGG 3 cut(s) 436, 829, 1177
PspGI CCWGG 3 cut(s) 436, 829, 1177
PspN4I GGNNCC 2 cut(s) 512, 706
PspPI GGNCC 1 cut(s) 1386
PstI CTGCAG 1 cut(s) 1042
PsuI RGATCY 2 cut(s) 693, 817
RsaI GTAC 7 cut(s) 483, 706, 929, 970, 1198, 1280, 1398
RsaNI GTAC 7 cut(s) 482, 705, 928, 969, 1197, 1279, 1397
SapI GCTCTTC 1 cut(s) 537
SaqAI TTAA 4 cut(s) 570, 639, 749, 1056
SatI GCNGC 4 cut(s) 195, 351, 882, 1038
Sau3AI GATC 7 cut(s) 157, 328, 477, 565, 693, 817, 1332
Sau96I GGNCC 1 cut(s) 1386
SchI GAGTC 4 cut(s) 41, 533, 990, 1295
ScrFI CCNGG 7 cut(s) 402, 403, 438, 831, 1179, 1206, 1376
SexAI ACCWGGT 2 cut(s) 829, 1177
SfcI CTRYAG 1 cut(s) 1038
Sfr274I CTCGAG 1 cut(s) 764
SfuI TTCGAA 1 cut(s) 1119
SinI GGWCC 1 cut(s) 1386
SlaI CTCGAG 1 cut(s) 764
SmaI CCCGGG 1 cut(s) 403
SmlI CTYRAG 5 cut(s) 496, 569, 764, 998, 1130
SmoI CTYRAG 5 cut(s) 496, 569, 764, 998, 1130
SnaBI TACGTA 1 cut(s) 1282
Sse9I AATT 2 cut(s) 269, 849
SsiI CCGC 1 cut(s) 879
SspI AATATT 1 cut(s) 1171
SspMI CTAG 2 cut(s) 347, 1031
StyD4I CCNGG 7 cut(s) 400, 401, 436, 829, 1177, 1204, 1374
TaaI ACNGT 6 cut(s) 12, 709, 726, 927, 1357, 1394
TaiI ACGT 2 cut(s) 1161, 1284
TaqI TCGA 5 cut(s) 14, 444, 765, 978, 1119
TaqII GACCGA 2 cut(s) 893, 1403
TasI AATT 2 cut(s) 269, 849
TatI WGTACW 2 cut(s) 968, 1196
TfiI GAWTC 3 cut(s) 184, 441, 1003
Tru1I TTAA 4 cut(s) 570, 639, 749, 1056
Tru9I TTAA 4 cut(s) 570, 639, 749, 1056
TseFI GTSAC 1 cut(s) 22
TseI GCWGC 4 cut(s) 194, 350, 881, 1037
Tsp45I GTSAC 1 cut(s) 22
TspDTI ATGAA 8 cut(s) 17, 479, 646, 665, 782, 1173, 1277, 1371
TspMI CCCGGG 1 cut(s) 401
Vha464I CTTAAG 1 cut(s) 569
VpaK11BI GGWCC 1 cut(s) 1386
XapI RAATTY 1 cut(s) 269
XbaI TCTAGA 1 cut(s) 1030
XcmI CCANNNNNNNNNTGG 1 cut(s) 865
XhoI CTCGAG 1 cut(s) 764
XmaI CCCGGG 1 cut(s) 401
XspI CTAG 2 cut(s) 347, 1031
ZraI GACGTC 1 cut(s) 1159
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.