carbohydrate transmembrane transporter inorganic phosphate transmembrane transporter phosphate transmembrane transporter sugar hydrogen symporter
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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT2G32830 |
| fragaria_vesca | FvH4_4g03540 FvH4_4g03540 |
| malus_domestica | MD07G1046300.v1.1 MD13G1213400.v1.1 |
| prunus_persica | Prupe.1G038600_v2.0.a1 Prupe.1G038600_v2.0.a1 Prupe.1G038600_v2.0.a1 Prupe.2G042500_v2.0.a1 |
| pyrus_communis | pycom07g03340 pycom13g18610 |
| rosa_chinensis | RchiOBHm_Chr4g0392861 RchiOBHm_Chr4g0392881 |
| rosa_laevigata | RLG00000009784 RLG00000009786 |
| rosa_multiflora | Rmu_sc0000498.1_g000061 Rmu_sc0000498.1_g000071 |
| rosa_roxburghii | Rroxscaffold_5G00337930 Rroxscaffold_5G00337970 |
| rosa_rugosa | Rorug03G0340800 Rorug03G0340900 |
| rosa_samantha | Rh4AG044500 Rh4BG040100 Rh4BG040200 Rh4CG047600 Rh4CG047700 Rh4DG041900 |
| rosa_wichuraiana | Rw4G003440 Rw4G003480 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| Acc65I | GGTACC | 1 cut(s) | 239 |
| AccB1I | GGYRCC | 3 cut(s) | 239, 485, 1067 |
| AccB7I | CCANNNNNTGG | 2 cut(s) | 915, 1135 |
| AccBSI | CCGCTC | 1 cut(s) | 731 |
| AccI | GTMKAC | 1 cut(s) | 725 |
| AccII | CGCG | 2 cut(s) | 83, 1391 |
| AccIII | TCCGGA | 1 cut(s) | 1513 |
| AclWI | GGATC | 2 cut(s) | 599, 798 |
| AcoI | YGGCCR | 2 cut(s) | 286, 381 |
| AcsI | RAATTY | 5 cut(s) | 820, 826, 869, 1453, 1603 |
| AcvI | CACGTG | 1 cut(s) | 482 |
| AcyI | GRCGYC | 1 cut(s) | 486 |
| AfaI | GTAC | 4 cut(s) | 59, 241, 327, 565 |
| AfiI | CCNNNNNNNGG | 3 cut(s) | 915, 1135, 1442 |
| AflIII | ACRYGT | 2 cut(s) | 479, 639 |
| AgsI | TTSAA | 4 cut(s) | 28, 583, 785, 825 |
| AjnI | CCWGG | 3 cut(s) | 184, 1075, 1435 |
| AloI | GAACNNNNNNTCC | 2 cut(s) | 181, 213 |
| AluBI | AGCT | 9 cut(s) | 142, 174, 256, 283, 368, 668, 677, 740, 1043 |
| AluI | AGCT | 9 cut(s) | 142, 174, 256, 283, 368, 668, 677, 740, 1043 |
| Alw21I | GWGCWC | 1 cut(s) | 657 |
| Alw26I | GTCTC | 5 cut(s) | 552, 562, 893, 1039, 1189 |
| AlwI | GGATC | 2 cut(s) | 599, 798 |
| Ama87I | CYCGRG | 2 cut(s) | 338, 559 |
| Aor13HI | TCCGGA | 1 cut(s) | 1513 |
| AoxI | GGCC | 5 cut(s) | 148, 228, 250, 286, 381 |
| ApeKI | GCWGC | 4 cut(s) | 41, 209, 497, 945 |
| ApoI | RAATTY | 5 cut(s) | 820, 826, 869, 1453, 1603 |
| Asp718I | GGTACC | 1 cut(s) | 239 |
| AspA2I | CCTAGG | 1 cut(s) | 145 |
| AspLEI | GCGC | 3 cut(s) | 488, 589, 1396 |
| AspS9I | GGNCC | 1 cut(s) | 1262 |
| AsuC2I | CCSGG | 1 cut(s) | 1622 |
| AsuHPI | GGTGA | 5 cut(s) | 287, 838, 853, 1021, 1081 |
| AvaI | CYCGRG | 2 cut(s) | 338, 559 |
| AvaII | GGWCC | 1 cut(s) | 1262 |
| AvrII | CCTAGG | 1 cut(s) | 145 |
| BaeI | ACNNNNGTAYC | 2 cut(s) | 1569, 1602 |
| BalI | TGGCCA | 1 cut(s) | 383 |
| BanI | GGYRCC | 3 cut(s) | 239, 485, 1067 |
| BbrPI | CACGTG | 1 cut(s) | 482 |
| BbsI | GAAGAC | 3 cut(s) | 496, 1018, 1421 |
| Bbv12I | GWGCWC | 1 cut(s) | 657 |
| BbvI | GCAGC | 4 cut(s) | 53, 196, 509, 957 |
| BccI | CCATC | 3 cut(s) | 458, 978, 1129 |
| BceAI | ACGGC | 2 cut(s) | 485, 864 |
| BcgI | CGANNNNNNTGC | 2 cut(s) | 112, 146 |
| BciT130I | CCWGG | 3 cut(s) | 186, 1077, 1437 |
| BclI | TGATCA | 1 cut(s) | 1186 |
| BcnI | CCSGG | 1 cut(s) | 1622 |
| BcoDI | GTCTC | 5 cut(s) | 552, 562, 893, 1039, 1189 |
| BfaI | CTAG | 2 cut(s) | 146, 926 |
| BfoI | RGCGCY | 2 cut(s) | 489, 590 |
| BlnI | CCTAGG | 1 cut(s) | 145 |
| Bme1390I | CCNGG | 4 cut(s) | 186, 1077, 1437, 1622 |
| Bme18I | GGWCC | 1 cut(s) | 1262 |
| BmeT110I | CYCGRG | 2 cut(s) | 338, 559 |
| BmgT120I | GGNCC | 1 cut(s) | 1262 |
| BmiI | GGNNCC | 6 cut(s) | 241, 487, 616, 920, 1069, 1512 |
| BmrFI | CCNGG | 4 cut(s) | 186, 1077, 1437, 1622 |
| BmsI | GCATC | 5 cut(s) | 94, 132, 306, 1411, 1455 |
| BpiI | GAAGAC | 3 cut(s) | 496, 1018, 1421 |
| Bpu10I | CCTNAGC | 1 cut(s) | 244 |
| BpuEI | CTTGAG | 1 cut(s) | 612 |
| BpuMI | CCSGG | 1 cut(s) | 1622 |
| Bsa29I | ATCGAT | 1 cut(s) | 1104 |
| BsaAI | YACGTR | 2 cut(s) | 482, 640 |
| BsaBI | GATNNNNATC | 1 cut(s) | 77 |
| BsaHI | GRCGYC | 1 cut(s) | 486 |
| BsaI | GGTCTC | 1 cut(s) | 893 |
| BsaJI | CCNNGG | 3 cut(s) | 145, 1075, 1436 |
| BsaWI | WCCGGW | 3 cut(s) | 399, 1513, 1607 |
| BsaXI | ACNNNNNCTCC | 8 cut(s) | 181, 211, 528, 558, 1350, 1380, 1566, 1596 |
| Bsc4I | CCNNNNNNNGG | 3 cut(s) | 915, 1135, 1442 |
| Bse1I | ACTGG | 2 cut(s) | 1088, 1129 |
| Bse8I | GATNNNNATC | 1 cut(s) | 77 |
| BseAI | TCCGGA | 1 cut(s) | 1513 |
| BseBI | CCWGG | 3 cut(s) | 186, 1077, 1437 |
| BseCI | ATCGAT | 1 cut(s) | 1104 |
| BseDI | CCNNGG | 3 cut(s) | 145, 1075, 1436 |
| BseGI | GGATG | 3 cut(s) | 705, 989, 1125 |
| BseJI | GATNNNNATC | 1 cut(s) | 77 |
| BseLI | CCNNNNNNNGG | 3 cut(s) | 915, 1135, 1442 |
| BseMII | CTCAG | 3 cut(s) | 378, 456, 1284 |
| BseNI | ACTGG | 2 cut(s) | 1088, 1129 |
| BseX3I | CGGCCG | 1 cut(s) | 286 |
| BseXI | GCAGC | 4 cut(s) | 53, 196, 509, 957 |
| BseYI | CCCAGC | 1 cut(s) | 673 |
| Bsh1236I | CGCG | 2 cut(s) | 83, 1391 |
| Bsh1285I | CGRYCG | 2 cut(s) | 289, 1117 |
| BshFI | GGCC | 5 cut(s) | 150, 230, 252, 288, 383 |
| BshNI | GGYRCC | 3 cut(s) | 239, 485, 1067 |
| BshVI | ATCGAT | 1 cut(s) | 1104 |
| BsiEI | CGRYCG | 2 cut(s) | 289, 1117 |
| BsiHKAI | GWGCWC | 1 cut(s) | 657 |
| BsiHKCI | CYCGRG | 2 cut(s) | 338, 559 |
| BsiSI | CCGG | 7 cut(s) | 400, 534, 710, 1304, 1514, 1608, 1622 |
| BslFI | GGGAC | 2 cut(s) | 1058, 1604 |
| BslI | CCNNNNNNNGG | 3 cut(s) | 915, 1135, 1442 |
| BsmAI | GTCTC | 5 cut(s) | 552, 562, 893, 1039, 1189 |
| BsmBI | CGTCTC | 2 cut(s) | 562, 1039 |
| BsmFI | GGGAC | 2 cut(s) | 1058, 1604 |
| BsmI | GAATGC | 1 cut(s) | 1097 |
| BsnI | GGCC | 5 cut(s) | 150, 230, 252, 288, 383 |
| Bso31I | GGTCTC | 1 cut(s) | 893 |
| BsoBI | CYCGRG | 2 cut(s) | 338, 559 |
| Bsp1286I | GDGCHC | 1 cut(s) | 657 |
| Bsp13I | TCCGGA | 1 cut(s) | 1513 |
| Bsp143I | GATC | 6 cut(s) | 112, 604, 790, 1155, 1186, 1316 |
| BspANI | GGCC | 5 cut(s) | 150, 230, 252, 288, 383 |
| BspCNI | CTCAG | 3 cut(s) | 377, 455, 1285 |
| BspDI | ATCGAT | 1 cut(s) | 1104 |
| BspEI | TCCGGA | 1 cut(s) | 1513 |
| BspFNI | CGCG | 2 cut(s) | 83, 1391 |
| BspHI | TCATGA | 1 cut(s) | 1149 |
| BspLI | GGNNCC | 6 cut(s) | 241, 487, 616, 920, 1069, 1512 |
| BspPI | GGATC | 2 cut(s) | 599, 798 |
| BspQI | GCTCTTC | 1 cut(s) | 263 |
| BspT107I | GGYRCC | 3 cut(s) | 239, 485, 1067 |
| BspTNI | GGTCTC | 1 cut(s) | 893 |
| BsrBI | CCGCTC | 1 cut(s) | 731 |
| BsrI | ACTGG | 2 cut(s) | 1088, 1129 |
| BssECI | CCNNGG | 3 cut(s) | 145, 1075, 1436 |
| BssMI | GATC | 6 cut(s) | 112, 604, 790, 1155, 1186, 1316 |
| BssNAI | GTATAC | 1 cut(s) | 726 |
| BssNI | GRCGYC | 1 cut(s) | 486 |
| BssT1I | CCWWGG | 1 cut(s) | 145 |
| Bst1107I | GTATAC | 1 cut(s) | 726 |
| Bst2UI | CCWGG | 3 cut(s) | 186, 1077, 1437 |
| Bst4CI | ACNGT | 8 cut(s) | 305, 622, 887, 1033, 1072, 1093, 1582, 1597 |
| Bst6I | CTCTTC | 3 cut(s) | 263, 959, 1533 |
| BstACI | GRCGYC | 1 cut(s) | 486 |
| BstBAI | YACGTR | 2 cut(s) | 482, 640 |
| BstC8I | GCNNGC | 4 cut(s) | 250, 254, 877, 1470 |
| BstDEI | CTNAG | 6 cut(s) | 244, 364, 442, 529, 774, 1293 |
| BstF5I | GGATG | 3 cut(s) | 705, 989, 1125 |
| BstFNI | CGCG | 2 cut(s) | 83, 1391 |
| BstH2I | RGCGCY | 2 cut(s) | 489, 590 |
| BstHHI | GCGC | 3 cut(s) | 488, 589, 1396 |
| BstKTI | GATC | 6 cut(s) | 115, 607, 793, 1158, 1189, 1319 |
| BstMAI | GTCTC | 5 cut(s) | 552, 562, 893, 1039, 1189 |
| BstMBI | GATC | 6 cut(s) | 112, 604, 790, 1155, 1186, 1316 |
| BstMCI | CGRYCG | 2 cut(s) | 289, 1117 |
| BstMWI | GCNNNNNNNGC | 9 cut(s) | 38, 190, 426, 494, 506, 584, 652, 674, 737 |
| BstNI | CCWGG | 3 cut(s) | 186, 1077, 1437 |
| BstSCI | CCNGG | 4 cut(s) | 184, 1075, 1435, 1620 |
| BstUI | CGCG | 2 cut(s) | 83, 1391 |
| BstV1I | GCAGC | 4 cut(s) | 53, 196, 509, 957 |
| BstV2I | GAAGAC | 3 cut(s) | 496, 1018, 1421 |
| BstX2I | RGATCY | 1 cut(s) | 790 |
| BstYI | RGATCY | 1 cut(s) | 790 |
| BstZ17I | GTATAC | 1 cut(s) | 726 |
| BstZI | CGGCCG | 1 cut(s) | 286 |
| Bsu15I | ATCGAT | 1 cut(s) | 1104 |
| BsuRI | GGCC | 5 cut(s) | 150, 230, 252, 288, 383 |
| BsuTUI | ATCGAT | 1 cut(s) | 1104 |
| BtgZI | GCGATG | 1 cut(s) | 916 |
| BtsCI | GGATG | 3 cut(s) | 705, 989, 1125 |
| BtsIMutI | CAGTG | 2 cut(s) | 99, 618 |
| Cac8I | GCNNGC | 4 cut(s) | 250, 254, 877, 1470 |
| CciI | TCATGA | 1 cut(s) | 1149 |
| CfoI | GCGC | 3 cut(s) | 488, 589, 1396 |
| Cfr13I | GGNCC | 1 cut(s) | 1262 |
| ClaI | ATCGAT | 1 cut(s) | 1104 |
| CseI | GACGC | 1 cut(s) | 47 |
| Csp6I | GTAC | 4 cut(s) | 58, 240, 326, 564 |
| CviAII | CATG | 7 cut(s) | 322, 454, 575, 658, 915, 1150, 1328 |
| CviQI | GTAC | 4 cut(s) | 58, 240, 326, 564 |
| DdeI | CTNAG | 6 cut(s) | 244, 364, 442, 529, 774, 1293 |
| DinI | GGCGCC | 1 cut(s) | 487 |
| DpnI | GATC | 6 cut(s) | 114, 606, 792, 1157, 1188, 1318 |
| DpnII | GATC | 6 cut(s) | 112, 604, 790, 1155, 1186, 1316 |
| EaeI | YGGCCR | 2 cut(s) | 286, 381 |
| EagI | CGGCCG | 1 cut(s) | 286 |
| Eam1104I | CTCTTC | 3 cut(s) | 263, 959, 1533 |
| EarI | CTCTTC | 3 cut(s) | 263, 959, 1533 |
| EciI | GGCGGA | 3 cut(s) | 661, 712, 1587 |
| EclXI | CGGCCG | 1 cut(s) | 286 |
| Eco130I | CCWWGG | 1 cut(s) | 145 |
| Eco31I | GGTCTC | 1 cut(s) | 893 |
| Eco32I | GATATC | 1 cut(s) | 1335 |
| Eco47I | GGWCC | 1 cut(s) | 1262 |
| Eco52I | CGGCCG | 1 cut(s) | 286 |
| Eco72I | CACGTG | 1 cut(s) | 482 |
| Eco88I | CYCGRG | 2 cut(s) | 338, 559 |
| EcoRI | GAATTC | 2 cut(s) | 869, 1453 |
| EcoRII | CCWGG | 3 cut(s) | 184, 1075, 1435 |
| EcoRV | GATATC | 1 cut(s) | 1335 |
| EcoT14I | CCWWGG | 1 cut(s) | 145 |
| EgeI | GGCGCC | 1 cut(s) | 487 |
| EheI | GGCGCC | 1 cut(s) | 487 |
| ErhI | CCWWGG | 1 cut(s) | 145 |
| Esp3I | CGTCTC | 2 cut(s) | 562, 1039 |
| FaeI | CATG | 7 cut(s) | 325, 457, 578, 661, 918, 1153, 1331 |
| FaqI | GGGAC | 2 cut(s) | 1058, 1604 |
| FatI | CATG | 7 cut(s) | 321, 453, 574, 657, 914, 1149, 1327 |
| FauI | CCCGC | 3 cut(s) | 76, 1000, 1348 |
| FbaI | TGATCA | 1 cut(s) | 1186 |
| FblI | GTMKAC | 1 cut(s) | 725 |
| FokI | GGATG | 3 cut(s) | 712, 996, 1112 |
| FspBI | CTAG | 2 cut(s) | 146, 926 |
| GlaI | GCGC | 3 cut(s) | 487, 588, 1395 |
| GsaI | CCCAGC | 1 cut(s) | 677 |
| HaeII | RGCGCY | 2 cut(s) | 489, 590 |
| HaeIII | GGCC | 5 cut(s) | 150, 230, 252, 288, 383 |
| HapII | CCGG | 7 cut(s) | 400, 534, 710, 1304, 1514, 1608, 1622 |
| HgaI | GACGC | 1 cut(s) | 47 |
| HhaI | GCGC | 3 cut(s) | 488, 589, 1396 |
| Hin1I | GRCGYC | 1 cut(s) | 486 |
| Hin1II | CATG | 7 cut(s) | 325, 457, 578, 661, 918, 1153, 1331 |
| Hin6I | GCGC | 3 cut(s) | 486, 587, 1394 |
| HinP1I | GCGC | 3 cut(s) | 486, 587, 1394 |
| HincII | GTYRAC | 1 cut(s) | 1239 |
| HindII | GTYRAC | 1 cut(s) | 1239 |
| HinfI | GANTC | 8 cut(s) | 525, 540, 988, 1119, 1177, 1207, 1406, 1517 |
| HpaII | CCGG | 7 cut(s) | 400, 534, 710, 1304, 1514, 1608, 1622 |
| HphI | GGTGA | 5 cut(s) | 287, 838, 853, 1021, 1081 |
| Hpy166II | GTNNAC | 4 cut(s) | 301, 726, 1089, 1239 |
| Hpy188I | TCNGA | 7 cut(s) | 460, 524, 744, 766, 983, 1405, 1411 |
| Hpy188III | TCNNGA | 5 cut(s) | 136, 559, 1150, 1514, 1548 |
| Hpy8I | GTNNAC | 4 cut(s) | 301, 726, 1089, 1239 |
| Hpy99I | CGWCG | 3 cut(s) | 1097, 1276, 1279 |
| HpyAV | CCTTC | 5 cut(s) | 241, 499, 589, 859, 905 |
| HpyCH4III | ACNGT | 8 cut(s) | 305, 622, 887, 1033, 1072, 1093, 1582, 1597 |
| HpyCH4IV | ACGT | 4 cut(s) | 165, 481, 639, 1277 |
| HpyCH4V | TGCA | 2 cut(s) | 514, 800 |
| HpyF10VI | GCNNNNNNNGC | 9 cut(s) | 38, 190, 426, 494, 506, 584, 652, 674, 737 |
| HpyF3I | CTNAG | 6 cut(s) | 244, 364, 442, 529, 774, 1293 |
| HpySE526I | ACGT | 4 cut(s) | 165, 481, 639, 1277 |
| Hsp92I | GRCGYC | 1 cut(s) | 486 |
| Hsp92II | CATG | 7 cut(s) | 325, 457, 578, 661, 918, 1153, 1331 |
| HspAI | GCGC | 3 cut(s) | 486, 587, 1394 |
| KasI | GGCGCC | 1 cut(s) | 485 |
| Kpn2I | TCCGGA | 1 cut(s) | 1513 |
| KpnI | GGTACC | 1 cut(s) | 243 |
| Ksp22I | TGATCA | 1 cut(s) | 1186 |
| Kzo9I | GATC | 6 cut(s) | 112, 604, 790, 1155, 1186, 1316 |
| LguI | GCTCTTC | 1 cut(s) | 263 |
| LmnI | GCTCC | 7 cut(s) | 147, 179, 198, 620, 665, 1358, 1370 |
| Lsp1109I | GCAGC | 4 cut(s) | 53, 196, 509, 957 |
| LweI | GCATC | 5 cut(s) | 94, 132, 306, 1411, 1455 |
| MaeI | CTAG | 2 cut(s) | 146, 926 |
| MaeII | ACGT | 4 cut(s) | 165, 481, 639, 1277 |
| MaeIII | GTNAC | 5 cut(s) | 133, 275, 359, 881, 1079 |
| MalI | GATC | 6 cut(s) | 114, 606, 792, 1157, 1188, 1318 |
| MbiI | CCGCTC | 1 cut(s) | 731 |
| MboI | GATC | 6 cut(s) | 112, 604, 790, 1155, 1186, 1316 |
| MflI | RGATCY | 1 cut(s) | 790 |
| MhlI | GDGCHC | 1 cut(s) | 657 |
| MlsI | TGGCCA | 1 cut(s) | 383 |
| MluNI | TGGCCA | 1 cut(s) | 383 |
| Mly113I | GGCGCC | 1 cut(s) | 486 |
| MlyI | GAGTC | 1 cut(s) | 1526 |
| MmeI | TCCRAC | 2 cut(s) | 438, 1348 |
| Mox20I | TGGCCA | 1 cut(s) | 383 |
| MroI | TCCGGA | 1 cut(s) | 1513 |
| MscI | TGGCCA | 1 cut(s) | 383 |
| MseI | TTAA | 2 cut(s) | 219, 1479 |
| MslI | CAYNNNNRTG | 1 cut(s) | 452 |
| Msp20I | TGGCCA | 1 cut(s) | 383 |
| MspA1I | CMGCKG | 1 cut(s) | 215 |
| MspI | CCGG | 7 cut(s) | 400, 534, 710, 1304, 1514, 1608, 1622 |
| MspR9I | CCNGG | 4 cut(s) | 186, 1077, 1437, 1622 |
| Mva1269I | GAATGC | 1 cut(s) | 1097 |
| MvaI | CCWGG | 3 cut(s) | 186, 1077, 1437 |
| MvnI | CGCG | 2 cut(s) | 83, 1391 |
| MwoI | GCNNNNNNNGC | 9 cut(s) | 38, 190, 426, 494, 506, 584, 652, 674, 737 |
| NarI | GGCGCC | 1 cut(s) | 486 |
| NciI | CCSGG | 1 cut(s) | 1622 |
| NdeII | GATC | 6 cut(s) | 112, 604, 790, 1155, 1186, 1316 |
| NlaIII | CATG | 7 cut(s) | 325, 457, 578, 661, 918, 1153, 1331 |
| NlaIV | GGNNCC | 6 cut(s) | 241, 487, 616, 920, 1069, 1512 |
| NmeAIII | GCCGAG | 2 cut(s) | 264, 879 |
| NmuCI | GTSAC | 4 cut(s) | 133, 275, 359, 881 |
| PaeR7I | CTCGAG | 1 cut(s) | 559 |
| PagI | TCATGA | 1 cut(s) | 1149 |
| PciSI | GCTCTTC | 1 cut(s) | 263 |
| PcsI | WCGNNNNNNNCGW | 2 cut(s) | 1017, 1101 |
| PctI | GAATGC | 1 cut(s) | 1097 |
| PfeI | GAWTC | 7 cut(s) | 525, 540, 988, 1119, 1177, 1207, 1406 |
| PflMI | CCANNNNNTGG | 2 cut(s) | 915, 1135 |
| PleI | GAGTC | 1 cut(s) | 1525 |
| PluTI | GGCGCC | 1 cut(s) | 489 |
| PmaCI | CACGTG | 1 cut(s) | 482 |
| PmlI | CACGTG | 1 cut(s) | 482 |
| PpsI | GAGTC | 1 cut(s) | 1525 |
| Ppu21I | YACGTR | 2 cut(s) | 482, 640 |
| Psp6I | CCWGG | 3 cut(s) | 184, 1075, 1435 |
| PspCI | CACGTG | 1 cut(s) | 482 |
| PspFI | CCCAGC | 1 cut(s) | 673 |
| PspGI | CCWGG | 3 cut(s) | 184, 1075, 1435 |
| PspN4I | GGNNCC | 6 cut(s) | 241, 487, 616, 920, 1069, 1512 |
| PspPI | GGNCC | 1 cut(s) | 1262 |
| PsuI | RGATCY | 1 cut(s) | 790 |
| RsaI | GTAC | 4 cut(s) | 59, 241, 327, 565 |
| RsaNI | GTAC | 4 cut(s) | 58, 240, 326, 564 |
| RseI | CAYNNNNRTG | 1 cut(s) | 452 |
| SapI | GCTCTTC | 1 cut(s) | 263 |
| SaqAI | TTAA | 2 cut(s) | 219, 1479 |
| Sau3AI | GATC | 6 cut(s) | 112, 604, 790, 1155, 1186, 1316 |
| Sau96I | GGNCC | 1 cut(s) | 1262 |
| SchI | GAGTC | 1 cut(s) | 1526 |
| ScrFI | CCNGG | 4 cut(s) | 186, 1077, 1437, 1622 |
| SduI | GDGCHC | 1 cut(s) | 657 |
| SfaNI | GCATC | 5 cut(s) | 94, 132, 306, 1411, 1455 |
| SfoI | GGCGCC | 1 cut(s) | 487 |
| Sfr274I | CTCGAG | 1 cut(s) | 559 |
| SinI | GGWCC | 1 cut(s) | 1262 |
| SlaI | CTCGAG | 1 cut(s) | 559 |
| SmiMI | CAYNNNNRTG | 1 cut(s) | 452 |
| SmlI | CTYRAG | 2 cut(s) | 559, 627 |
| SmoI | CTYRAG | 2 cut(s) | 559, 627 |
| SspDI | GGCGCC | 1 cut(s) | 485 |
| SspMI | CTAG | 2 cut(s) | 146, 926 |
| StyD4I | CCNGG | 4 cut(s) | 184, 1075, 1435, 1620 |
| StyI | CCWWGG | 1 cut(s) | 145 |
| TaaI | ACNGT | 8 cut(s) | 305, 622, 887, 1033, 1072, 1093, 1582, 1597 |
| TaiI | ACGT | 4 cut(s) | 168, 484, 642, 1280 |
| TaqI | TCGA | 6 cut(s) | 560, 1104, 1117, 1210, 1319, 1547 |
| TaqII | GACCGA | 1 cut(s) | 1103 |
| TatI | WGTACW | 1 cut(s) | 563 |
| TfiI | GAWTC | 7 cut(s) | 525, 540, 988, 1119, 1177, 1207, 1406 |
| Tru1I | TTAA | 2 cut(s) | 219, 1479 |
| Tru9I | TTAA | 2 cut(s) | 219, 1479 |
| TscAI | CASTG | 2 cut(s) | 106, 625 |
| TseFI | GTSAC | 4 cut(s) | 133, 275, 359, 881 |
| TseI | GCWGC | 4 cut(s) | 41, 209, 497, 945 |
| Tsp45I | GTSAC | 4 cut(s) | 133, 275, 359, 881 |
| TspDTI | ATGAA | 7 cut(s) | 481, 716, 819, 1022, 1090, 1114, 1138 |
| TspGWI | ACGGA | 1 cut(s) | 387 |
| TspRI | CASTG | 2 cut(s) | 106, 625 |
| Van91I | CCANNNNNTGG | 2 cut(s) | 915, 1135 |
| VpaK11BI | GGWCC | 1 cut(s) | 1262 |
| XapI | RAATTY | 5 cut(s) | 820, 826, 869, 1453, 1603 |
| XhoI | CTCGAG | 1 cut(s) | 559 |
| XmaJI | CCTAGG | 1 cut(s) | 145 |
| XmiI | GTMKAC | 1 cut(s) | 725 |
| XspI | CTAG | 2 cut(s) | 146, 926 |