Basic Information

Type: gene

Biological Identity

Species

rosa_roxburghii

Chromosome

GWHEROQ00000005

Orthogroup ID

OG0005218

Physical Location & Seq

Genomic Coordinates Forward (+)

6119915 .. 6123651

Gene Structure 3737 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rroxscaffold_5G00337930.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1617 bp

ATGGCTAAAGAGCAATTGGGAGTGCTAAATGCACTTGATGTTGCCAAGACTCAATGGTATCATTTCACAGCAATTGTAATTGCTGGAATGGGATTCTTCACTGATGCTTATGATCTTTTCTGCATTTCCTTGGTCTCCAAGTTACTCGGCCGCATATACTACACCGACATAACCCATCCGAAGCCAGGAACGTTACCACCAAATGTGGCTGCTGCCGTTAATGGTGTGGCTCTAGTTGGAACCCTAGCCGGCCAACTCTTCTTCGGGTGGCTCGGTGACAAATTGGGTCGCAAAAAGGTCTATGGGATCACCCTTGTTCTCATGGTCGTCTGTTCCATTGCATCTGGCCTCTCATTTTCGGATCACCCAACCAGCGTGATCTCCACTCTTTGCTTCTTCCGCTTCTGGCTCGGATTCGGCATTGGTGGCGACTACCCCCTTTCCGCCACAATCATGTCCGAATATGCCAACAAAAAAACCCGTGGGGCTTTTATAGCAGCGGTGTTTGCTATGCAAGGGTTTGGGATTTTGGCTGGAGGAATTGTGGCTTTGATTGTCTCAACTGCTTTCGATAAAAGCTTCCCAGCTCCTACATACGCAGAGAATGCGGCTGCTTCTCTAGCCCCTCAAGCCGATTATGTCTGGCGGATAATTCTCATGTTTGGGGCTGTTCCTGCTGGTATGACTTACTACTGGCGTATGAAAATGCCTGAAACTGCCCGTTACACCGCCCTCGTGGCCAAAAATGCCAAGCTAGCTGCAGCAGACATGTCTAAGGTTCTCCAAGTTGAACTTGAAGATGAAGAAGAGAAGGTACAGAAATATACTGAAGAGAAATCCAATTCCTTTGGTTTGTTCAGTAAGGAGTTTGCTAAAAGGCATGGTTGGCATTTACTTGGAACAACTTCAACTTGGTTCCTATTAGACATTGCCTTCTACAGCCAAAACCTTTTCCAAAAGGATATCTTCTCTGCAATCGGGTGGATCCCTTCAGCCGAAAAAATGAATGCAATTCATGAGGTTTTTAGAATTGCAAGAGCTCAGACACTCATAGCAATGTGCAGCACTGTGCCCGGCTACTGGTTCACTGTGGTGTTCATTGATTATATGGGCCGATTTGCAATCCAACTGATGGGCTTCTTCTTCATGACAGTCTTCATGTTTGCACTTGCAATTCCTTACCATCACTGGACCTTGAAGCCCAATAGAATTGGGTTTGTAGTAATTTATTCACTAACCTTTTTCTTTGCCAACTTTGGGCCCAATGCCACCACATTCGTTGTACCCGCTGAAATTTTCCCGGCCCGTCTGAGGTCAACGTGTCACGGAATTTCCGCGGCTGCTGGGAAGGCGGGAGCAATCGTGGGAGCTTTCGGATTCTTGTATGCGGCCCAAAACAAGGACCCGAAGAAGACCGATGCAGGGTACCCGCCCGGCATTGGTGTGAAGAATGCTCTTATTATGCTTGGCGTTATCAACTTTTTCGGGATGGTGTTTACTTTCTTGGTGCCAGAGTCCAAGGGAAAATCACTTGAAGAGTTGACAGGTGAGAATGAAGATGGGGATGAGGCCACGGAGGAGCAAGCCCCTCCTACTTATAGAACTGTTCCAGTGTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0005215 GO:0005315 GO:0005575 GO:0005623 GO:0005886 GO:0005887 GO:0006810 GO:0006811 GO:0006817 GO:0006820 GO:0006950 GO:0007154 GO:0008150 GO:0008509 GO:0009267 GO:0009605 GO:0009987 GO:0009991 GO:0015075 GO:0015103 GO:0015114 GO:0015291 GO:0015318 GO:0015698 GO:0016020 GO:0016021 GO:0016036 GO:0022804 GO:0022857 GO:0031224 GO:0031226 GO:0031667 GO:0031668 GO:0031669 GO:0033554 GO:0034220 GO:0035435 GO:0042594 GO:0044425 GO:0044459 GO:0044464 GO:0050896 GO:0051179 GO:0051234 GO:0051716 GO:0055085 GO:0071496 GO:0071944 GO:0098656 GO:0098660 GO:0098661 GO:1901683 GO:1901684

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Sugar_tr

Protein Analysis

538

Amino Acids

59.08

Weight (kDa)

8.37

Isoelectric Point (pI)

30.65

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Sugar_tr	PF00083	26 - 514	8.8e-51	Sugar (and other) transporter
MFS_1	PF07690	65 - 457	3.7e-23	Major Facilitator Superfamily

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

Line Width

Align Labels (Cladogram)

Image

Tree File

Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0005218)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT2G32830
fragaria_vesca	FvH4_4g03540 FvH4_4g03540
malus_domestica	MD07G1046300.v1.1 MD13G1213400.v1.1
prunus_persica	Prupe.1G038600_v2.0.a1 Prupe.1G038600_v2.0.a1 Prupe.1G038600_v2.0.a1 Prupe.2G042500_v2.0.a1
pyrus_communis	pycom07g03340 pycom13g18610
rosa_chinensis	RchiOBHm_Chr4g0392861 RchiOBHm_Chr4g0392881
rosa_laevigata	RLG00000009784 RLG00000009786
rosa_multiflora	Rmu_sc0000498.1_g000061 Rmu_sc0000498.1_g000071
rosa_roxburghii	Rroxscaffold_5G00337930 Rroxscaffold_5G00337970
rosa_rugosa	Rorug03G0340800 Rorug03G0340900
rosa_samantha	Rh4AG044500 Rh4BG040100 Rh4BG040200 Rh4CG047600 Rh4CG047700 Rh4DG041900
rosa_wichuraiana	Rw4G003440 Rw4G003480

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
Acc65I	GGTACC	1 cut(s)	1425
AccB1I	GGYRCC	2 cut(s)	1425, 1507
AccB7I	CCANNNNNTGG	1 cut(s)	1132
AccII	CGCG	1 cut(s)	1337
AclI	AACGTT	1 cut(s)	191
AclWI	GGATC	4 cut(s)	314, 369, 979, 992
AcoI	YGGCCR	3 cut(s)	148, 250, 738
AcsI	RAATTY	2 cut(s)	1293, 1329
AcuI	CTGAAG	2 cut(s)	849, 975
AfaI	GTAC	3 cut(s)	816, 1284, 1427
AfiI	CCNNNNNNNGG	8 cut(s)	185, 1080, 1132, 1257, 1311, 1399, 1422, 1439
AflIII	ACRYGT	2 cut(s)	768, 1319
AgsI	TTSAA	5 cut(s)	791, 797, 909, 1198, 1535
AjnI	CCWGG	1 cut(s)	184
AleI	CACNNNNGTG	1 cut(s)	1091
AluBI	AGCT	6 cut(s)	579, 587, 754, 758, 1040, 1370
AluI	AGCT	6 cut(s)	579, 587, 754, 758, 1040, 1370
Alw21I	GWGCWC	1 cut(s)	1042
Alw26I	GTCTC	2 cut(s)	139, 562
AlwI	GGATC	4 cut(s)	314, 369, 979, 992
AoxI	GGCC	9 cut(s)	148, 250, 346, 738, 1111, 1259, 1302, 1389, 1569
ApaI	GGGCCC	1 cut(s)	1263
ApeKI	GCWGC	8 cut(s)	209, 212, 497, 611, 758, 761, 1062, 1340
ApoI	RAATTY	2 cut(s)	1293, 1329
Asp700I	GAANNNNTTC	1 cut(s)	904
Asp718I	GGTACC	1 cut(s)	1425
AspS9I	GGNCC	7 cut(s)	1111, 1191, 1259, 1260, 1303, 1390, 1402
AsuC2I	CCSGG	3 cut(s)	1074, 1301, 1434
AsuHPI	GGTGA	4 cut(s)	287, 301, 356, 1559
AsuNHI	GCTAGC	1 cut(s)	754
AvaII	GGWCC	2 cut(s)	1191, 1402
BaeGI	GKGCMC	2 cut(s)	1074, 1263
BalI	TGGCCA	1 cut(s)	740
BamHI	GGATCC	1 cut(s)	984
BanI	GGYRCC	2 cut(s)	1425, 1507
BanII	GRGCYC	2 cut(s)	1042, 1263
BarI	GAAGNNNNNNTAC	2 cut(s)	798, 830
BauI	CACGAG	1 cut(s)	734
BbsI	GAAGAC	2 cut(s)	1147, 1418
Bbv12I	GWGCWC	1 cut(s)	1042
BbvI	GCAGC	8 cut(s)	196, 199, 509, 598, 745, 773, 1074, 1327
BccI	CCATC	5 cut(s)	183, 1126, 1191, 1483, 1553
BceAI	ACGGC	1 cut(s)	200
BciT130I	CCWGG	1 cut(s)	186
BcnI	CCSGG	3 cut(s)	1074, 1301, 1434
BcoDI	GTCTC	2 cut(s)	139, 562
BfaI	CTAG	4 cut(s)	233, 245, 620, 755
BfmI	CTRYAG	2 cut(s)	759, 937
BglI	GCCNNNNNGGC	1 cut(s)	737
Bme1390I	CCNGG	4 cut(s)	186, 1074, 1301, 1434
Bme18I	GGWCC	2 cut(s)	1191, 1402
BmgT120I	GGNCC	7 cut(s)	1111, 1191, 1259, 1260, 1303, 1390, 1402
BmiI	GGNNCC	7 cut(s)	241, 917, 986, 1261, 1404, 1427, 1509
BmrFI	CCNGG	4 cut(s)	186, 1074, 1301, 1434
BmsI	GCATC	3 cut(s)	94, 350, 1408
BmtI	GCTAGC	1 cut(s)	758
BpiI	GAAGAC	2 cut(s)	1147, 1418
BpmI	CTGGAG	1 cut(s)	555
BpuEI	CTTGAG	1 cut(s)	612
BpuMI	CCSGG	3 cut(s)	1074, 1301, 1434
BsaI	GGTCTC	1 cut(s)	139
BsaJI	CCNNGG	5 cut(s)	129, 481, 1335, 1518, 1572
BsaXI	ACNNNNNCTCC	4 cut(s)	528, 558, 1347, 1377
Bsc4I	CCNNNNNNNGG	8 cut(s)	185, 1080, 1132, 1257, 1311, 1399, 1422, 1439
Bse118I	RCCGGY	1 cut(s)	248
Bse1I	ACTGG	4 cut(s)	698, 1085, 1193, 1610
Bse3DI	GCAATG	3 cut(s)	336, 927, 1062
BseBI	CCWGG	1 cut(s)	186
BseDI	CCNNGG	5 cut(s)	129, 481, 1335, 1518, 1572
BseGI	GGATG	3 cut(s)	175, 1494, 1570
BseLI	CCNNNNNNNGG	8 cut(s)	185, 1080, 1132, 1257, 1311, 1399, 1422, 1439
BseMI	GCAATG	3 cut(s)	336, 927, 1062
BseMII	CTCAG	2 cut(s)	1055, 1301
BseNI	ACTGG	4 cut(s)	698, 1085, 1193, 1610
BseRI	GAGGAG	1 cut(s)	1592
BseSI	GKGCMC	2 cut(s)	1074, 1263
BseX3I	CGGCCG	1 cut(s)	148
BseXI	GCAGC	8 cut(s)	196, 199, 509, 598, 745, 773, 1074, 1327
BseYI	CCCAGC	2 cut(s)	583, 1343
BsgI	GTGCAG	1 cut(s)	1081
Bsh1236I	CGCG	1 cut(s)	1337
Bsh1285I	CGRYCG	1 cut(s)	151
BshFI	GGCC	9 cut(s)	150, 252, 348, 740, 1113, 1261, 1304, 1391, 1571
BshNI	GGYRCC	2 cut(s)	1425, 1507
BsiEI	CGRYCG	1 cut(s)	151
BsiHKAI	GWGCWC	1 cut(s)	1042
BsiSI	CCGG	4 cut(s)	249, 1074, 1301, 1434
BslI	CCNNNNNNNGG	8 cut(s)	185, 1080, 1132, 1257, 1311, 1399, 1422, 1439
BsmAI	GTCTC	2 cut(s)	139, 562
BsmI	GAATGC	3 cut(s)	610, 1012, 1456
BsnI	GGCC	9 cut(s)	150, 252, 348, 740, 1113, 1261, 1304, 1391, 1571
Bso31I	GGTCTC	1 cut(s)	139
Bsp120I	GGGCCC	1 cut(s)	1259
Bsp1286I	GDGCHC	3 cut(s)	1042, 1074, 1263
Bsp143I	GATC	5 cut(s)	112, 306, 361, 378, 984
BspANI	GGCC	9 cut(s)	150, 252, 348, 740, 1113, 1261, 1304, 1391, 1571
BspCNI	CTCAG	2 cut(s)	1054, 1302
BspFNI	CGCG	1 cut(s)	1337
BspHI	TCATGA	2 cut(s)	1015, 1146
BspLI	GGNNCC	7 cut(s)	241, 917, 986, 1261, 1404, 1427, 1509
BspMAI	CTGCAG	1 cut(s)	763
BspOI	GCTAGC	1 cut(s)	758
BspPI	GGATC	4 cut(s)	314, 369, 979, 992
BspT107I	GGYRCC	2 cut(s)	1425, 1507
BspTNI	GGTCTC	1 cut(s)	139
BsrDI	GCAATG	3 cut(s)	336, 927, 1062
BsrFI	RCCGGY	1 cut(s)	248
BsrI	ACTGG	4 cut(s)	698, 1085, 1193, 1610
BssAI	RCCGGY	1 cut(s)	248
BssECI	CCNNGG	5 cut(s)	129, 481, 1335, 1518, 1572
BssMI	GATC	5 cut(s)	112, 306, 361, 378, 984
BssSI	CACGAG	1 cut(s)	734
BssT1I	CCWWGG	2 cut(s)	129, 1518
Bst2BI	CACGAG	1 cut(s)	734
Bst2UI	CCWGG	1 cut(s)	186
Bst4CI	ACNGT	4 cut(s)	1069, 1090, 1153, 1606
Bst6I	CTCTTC	4 cut(s)	263, 801, 825, 1530
BstAPI	GCANNNNNTGC	1 cut(s)	605
BstC8I	GCNNGC	3 cut(s)	250, 756, 1584
BstDEI	CTNAG	3 cut(s)	774, 1041, 1310
BstDSI	CCRYGG	3 cut(s)	481, 1335, 1572
BstF5I	GGATG	3 cut(s)	175, 1494, 1570
BstFNI	CGCG	1 cut(s)	1337
BstKTI	GATC	5 cut(s)	115, 309, 364, 381, 987
BstMAI	GTCTC	2 cut(s)	139, 562
BstMBI	GATC	5 cut(s)	112, 306, 361, 378, 984
BstMCI	CGRYCG	1 cut(s)	151
BstNI	CCWGG	1 cut(s)	186
BstNSI	RCATGY	1 cut(s)	772
BstSCI	CCNGG	4 cut(s)	184, 1072, 1299, 1432
BstSFI	CTRYAG	2 cut(s)	759, 937
BstSLI	GKGCMC	2 cut(s)	1074, 1263
BstUI	CGCG	1 cut(s)	1337
BstV1I	GCAGC	8 cut(s)	196, 199, 509, 598, 745, 773, 1074, 1327
BstV2I	GAAGAC	2 cut(s)	1147, 1418
BstX2I	RGATCY	1 cut(s)	984
BstYI	RGATCY	1 cut(s)	984
BstZI	CGGCCG	1 cut(s)	148
BsuRI	GGCC	9 cut(s)	150, 252, 348, 740, 1113, 1261, 1304, 1391, 1571
BtgI	CCRYGG	3 cut(s)	481, 1335, 1572
BtsCI	GGATG	3 cut(s)	175, 1494, 1570
BtsIMutI	CAGTG	5 cut(s)	99, 1065, 1086, 1186, 1617
Cac8I	GCNNGC	3 cut(s)	250, 756, 1584
CciI	TCATGA	2 cut(s)	1015, 1146
Cfr10I	RCCGGY	1 cut(s)	248
Cfr13I	GGNCC	7 cut(s)	1111, 1191, 1259, 1260, 1303, 1390, 1402
Cfr42I	CCGCGG	1 cut(s)	1338
Csp6I	GTAC	3 cut(s)	815, 1283, 1426
CspCI	CAANNNNNGTGG	2 cut(s)	1261, 1296
CviAII	CATG	8 cut(s)	322, 454, 658, 769, 881, 1016, 1147, 1159
CviQI	GTAC	3 cut(s)	815, 1283, 1426
DdeI	CTNAG	3 cut(s)	774, 1041, 1310
DpnI	GATC	5 cut(s)	114, 308, 363, 380, 986
DpnII	GATC	5 cut(s)	112, 306, 361, 378, 984
EaeI	YGGCCR	3 cut(s)	148, 250, 738
EagI	CGGCCG	1 cut(s)	148
Eam1104I	CTCTTC	4 cut(s)	263, 801, 825, 1530
EarI	CTCTTC	4 cut(s)	263, 801, 825, 1530
EciI	GGCGGA	2 cut(s)	433, 661
Ecl136II	GAGCTC	1 cut(s)	1040
EclXI	CGGCCG	1 cut(s)	148
Eco130I	CCWWGG	2 cut(s)	129, 1518
Eco24I	GRGCYC	2 cut(s)	1042, 1263
Eco31I	GGTCTC	1 cut(s)	139
Eco32I	GATATC	1 cut(s)	964
Eco47I	GGWCC	2 cut(s)	1191, 1402
Eco52I	CGGCCG	1 cut(s)	148
Eco53kI	GAGCTC	1 cut(s)	1040
Eco57I	CTGAAG	2 cut(s)	849, 975
EcoICRI	GAGCTC	1 cut(s)	1040
EcoO109I	RGGNCCY	1 cut(s)	1402
EcoRII	CCWGG	1 cut(s)	184
EcoRV	GATATC	1 cut(s)	964
EcoT14I	CCWWGG	2 cut(s)	129, 1518
EcoT38I	GRGCYC	2 cut(s)	1042, 1263
ErhI	CCWWGG	2 cut(s)	129, 1518
FaeI	CATG	8 cut(s)	325, 457, 661, 772, 884, 1019, 1150, 1162
FalI	AAGNNNNNCTT	4 cut(s)	777, 809, 950, 982
FatI	CATG	8 cut(s)	321, 453, 657, 768, 880, 1015, 1146, 1158
FauI	CCCGC	3 cut(s)	1294, 1345, 1437
FokI	GGATG	3 cut(s)	162, 1501, 1577
FriOI	GRGCYC	2 cut(s)	1042, 1263
FspBI	CTAG	4 cut(s)	233, 245, 620, 755
GsaI	CCCAGC	2 cut(s)	587, 1347
GsuI	CTGGAG	1 cut(s)	555
HaeIII	GGCC	9 cut(s)	150, 252, 348, 740, 1113, 1261, 1304, 1391, 1571
HapII	CCGG	4 cut(s)	249, 1074, 1301, 1434
Hin1II	CATG	8 cut(s)	325, 457, 661, 772, 884, 1019, 1150, 1162
HincII	GTYRAC	2 cut(s)	1317, 1542
HindII	GTYRAC	2 cut(s)	1317, 1542
HindIII	AAGCTT	1 cut(s)	577
HinfI	GANTC	5 cut(s)	49, 93, 414, 1377, 1514
HpaII	CCGG	4 cut(s)	249, 1074, 1301, 1434
HphI	GGTGA	4 cut(s)	287, 301, 356, 1559
Hpy166II	GTNNAC	4 cut(s)	1086, 1317, 1497, 1542
Hpy188I	TCNGA	7 cut(s)	180, 361, 413, 460, 1044, 1311, 1376
Hpy188III	TCNNGA	3 cut(s)	1016, 1147, 1486
Hpy8I	GTNNAC	4 cut(s)	1086, 1317, 1497, 1542
HpyAV	CCTTC	4 cut(s)	805, 943, 999, 1342
HpyCH4III	ACNGT	4 cut(s)	1069, 1090, 1153, 1606
HpyCH4IV	ACGT	2 cut(s)	191, 1319
HpyF3I	CTNAG	3 cut(s)	774, 1041, 1310
HpySE526I	ACGT	2 cut(s)	191, 1319
Hsp92II	CATG	8 cut(s)	325, 457, 661, 772, 884, 1019, 1150, 1162
KpnI	GGTACC	1 cut(s)	1429
KroI	GCCGGC	1 cut(s)	248
KroNI	GCCGGC	1 cut(s)	250
KspI	CCGCGG	1 cut(s)	1338
Kzo9I	GATC	5 cut(s)	112, 306, 361, 378, 984
LmnI	GCTCC	4 cut(s)	592, 1355, 1367, 1579
Lsp1109I	GCAGC	8 cut(s)	196, 199, 509, 598, 745, 773, 1074, 1327
LweI	GCATC	3 cut(s)	94, 350, 1408
MaeI	CTAG	4 cut(s)	233, 245, 620, 755
MaeII	ACGT	2 cut(s)	191, 1319
MaeIII	GTNAC	5 cut(s)	141, 192, 275, 722, 1322
MalI	GATC	5 cut(s)	114, 308, 363, 380, 986
MboI	GATC	5 cut(s)	112, 306, 361, 378, 984
MfeI	CAATTG	2 cut(s)	14, 72
MflI	RGATCY	1 cut(s)	984
MhlI	GDGCHC	3 cut(s)	1042, 1074, 1263
MlsI	TGGCCA	1 cut(s)	740
MluNI	TGGCCA	1 cut(s)	740
MlyI	GAGTC	2 cut(s)	43, 1523
MmeI	TCCRAC	2 cut(s)	217, 1150
MnlI	CCTC	9 cut(s)	359, 530, 636, 743, 1012, 1305, 1561, 1570, 1599
Mox20I	TGGCCA	1 cut(s)	740
MroNI	GCCGGC	1 cut(s)	248
MroXI	GAANNNNTTC	1 cut(s)	904
MscI	TGGCCA	1 cut(s)	740
MseI	TTAA	1 cut(s)	219
MslI	CAYNNNNRTG	4 cut(s)	452, 1055, 1091, 1442
Msp20I	TGGCCA	1 cut(s)	740
MspA1I	CMGCKG	3 cut(s)	500, 1289, 1337
MspI	CCGG	4 cut(s)	249, 1074, 1301, 1434
MspR9I	CCNGG	4 cut(s)	186, 1074, 1301, 1434
MunI	CAATTG	2 cut(s)	14, 72
Mva1269I	GAATGC	3 cut(s)	610, 1012, 1456
MvaI	CCWGG	1 cut(s)	186
MvnI	CGCG	1 cut(s)	1337
NaeI	GCCGGC	1 cut(s)	250
NciI	CCSGG	3 cut(s)	1074, 1301, 1434
NdeII	GATC	5 cut(s)	112, 306, 361, 378, 984
NgoMIV	GCCGGC	1 cut(s)	248
NheI	GCTAGC	1 cut(s)	754
NlaIII	CATG	8 cut(s)	325, 457, 661, 772, 884, 1019, 1150, 1162
NlaIV	GGNNCC	7 cut(s)	241, 917, 986, 1261, 1404, 1427, 1509
NmeAIII	GCCGAG	1 cut(s)	126
NmuCI	GTSAC	2 cut(s)	275, 1322
NspI	RCATGY	1 cut(s)	772
OliI	CACNNNNGTG	1 cut(s)	1091
PagI	TCATGA	2 cut(s)	1015, 1146
PciI	ACATGT	1 cut(s)	768
PctI	GAATGC	3 cut(s)	610, 1012, 1456
PdiI	GCCGGC	1 cut(s)	250
PdmI	GAANNNNTTC	1 cut(s)	904
PfeI	GAWTC	3 cut(s)	93, 414, 1377
PflMI	CCANNNNNTGG	1 cut(s)	1132
PleI	GAGTC	2 cut(s)	43, 1522
PpsI	GAGTC	2 cut(s)	43, 1522
PpuMI	RGGWCCY	1 cut(s)	1402
PscI	ACATGT	1 cut(s)	768
Psp124BI	GAGCTC	1 cut(s)	1042
Psp1406I	AACGTT	1 cut(s)	191
Psp5II	RGGWCCY	1 cut(s)	1402
Psp6I	CCWGG	1 cut(s)	184
PspFI	CCCAGC	2 cut(s)	583, 1343
PspGI	CCWGG	1 cut(s)	184
PspN4I	GGNNCC	7 cut(s)	241, 917, 986, 1261, 1404, 1427, 1509
PspOMI	GGGCCC	1 cut(s)	1259
PspPI	GGNCC	7 cut(s)	1111, 1191, 1259, 1260, 1303, 1390, 1402
PspPPI	RGGWCCY	1 cut(s)	1402
PstI	CTGCAG	1 cut(s)	763
PsuI	RGATCY	1 cut(s)	984
RsaI	GTAC	3 cut(s)	816, 1284, 1427
RsaNI	GTAC	3 cut(s)	815, 1283, 1426
RseI	CAYNNNNRTG	4 cut(s)	452, 1055, 1091, 1442
SacI	GAGCTC	1 cut(s)	1042
SacII	CCGCGG	1 cut(s)	1338
SaqAI	TTAA	1 cut(s)	219
Sau3AI	GATC	5 cut(s)	112, 306, 361, 378, 984
Sau96I	GGNCC	7 cut(s)	1111, 1191, 1259, 1260, 1303, 1390, 1402
SchI	GAGTC	2 cut(s)	43, 1523
ScrFI	CCNGG	4 cut(s)	186, 1074, 1301, 1434
SduI	GDGCHC	3 cut(s)	1042, 1074, 1263
SfaNI	GCATC	3 cut(s)	94, 350, 1408
SfcI	CTRYAG	2 cut(s)	759, 937
Sfr303I	CCGCGG	1 cut(s)	1338
SgrBI	CCGCGG	1 cut(s)	1338
SinI	GGWCC	2 cut(s)	1191, 1402
SmiMI	CAYNNNNRTG	4 cut(s)	452, 1055, 1091, 1442
SmlI	CTYRAG	1 cut(s)	627
SmoI	CTYRAG	1 cut(s)	627
SspMI	CTAG	4 cut(s)	233, 245, 620, 755
SstI	GAGCTC	1 cut(s)	1042
StyD4I	CCNGG	4 cut(s)	184, 1072, 1299, 1432
StyI	CCWWGG	2 cut(s)	129, 1518
TaaI	ACNGT	4 cut(s)	1069, 1090, 1153, 1606
TaiI	ACGT	2 cut(s)	194, 1322
TaqI	TCGA	1 cut(s)	570
TaqII	GACCGA	1 cut(s)	1430
TauI	GCSGC	4 cut(s)	153, 611, 1340, 1391
TfiI	GAWTC	3 cut(s)	93, 414, 1377
Tru1I	TTAA	1 cut(s)	219
Tru9I	TTAA	1 cut(s)	219
TscAI	CASTG	5 cut(s)	106, 1072, 1093, 1193, 1617
TseFI	GTSAC	2 cut(s)	275, 1322
TseI	GCWGC	8 cut(s)	209, 212, 497, 611, 758, 761, 1062, 1340
Tsp45I	GTSAC	2 cut(s)	275, 1322
TspDTI	ATGAA	8 cut(s)	716, 816, 1004, 1019, 1087, 1135, 1147, 1569
TspGWI	ACGGA	2 cut(s)	1341, 1589
TspRI	CASTG	5 cut(s)	106, 1072, 1093, 1193, 1617
Van91I	CCANNNNNTGG	1 cut(s)	1132
VpaK11BI	GGWCC	2 cut(s)	1191, 1402
XapI	RAATTY	2 cut(s)	1293, 1329
XceI	RCATGY	1 cut(s)	772
XmnI	GAANNNNTTC	1 cut(s)	904
XspI	CTAG	4 cut(s)	233, 245, 620, 755

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.