Inorganic phosphate transporter
Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.
| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT2G32830 |
| fragaria_vesca | FvH4_4g03540 FvH4_4g03540 |
| malus_domestica | MD07G1046300.v1.1 MD13G1213400.v1.1 |
| prunus_persica | Prupe.1G038600_v2.0.a1 Prupe.1G038600_v2.0.a1 Prupe.1G038600_v2.0.a1 Prupe.2G042500_v2.0.a1 |
| pyrus_communis | pycom07g03340 pycom13g18610 |
| rosa_chinensis | RchiOBHm_Chr4g0392861 RchiOBHm_Chr4g0392881 |
| rosa_laevigata | RLG00000009784 RLG00000009786 |
| rosa_multiflora | Rmu_sc0000498.1_g000061 Rmu_sc0000498.1_g000071 |
| rosa_roxburghii | Rroxscaffold_5G00337930 Rroxscaffold_5G00337970 |
| rosa_rugosa | Rorug03G0340800 Rorug03G0340900 |
| rosa_samantha | Rh4AG044500 Rh4BG040100 Rh4BG040200 Rh4CG047600 Rh4CG047700 Rh4DG041900 |
| rosa_wichuraiana | Rw4G003440 Rw4G003480 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| Acc65I | GGTACC | 3 cut(s) | 60, 896, 1422 |
| AccB1I | GGYRCC | 5 cut(s) | 60, 589, 896, 1364, 1422 |
| AccB7I | CCANNNNNTGG | 2 cut(s) | 909, 1129 |
| AccI | GTMKAC | 1 cut(s) | 1313 |
| AccII | CGCG | 1 cut(s) | 486 |
| AciI | CCGC | 5 cut(s) | 213, 240, 486, 762, 1427 |
| AclWI | GGATC | 4 cut(s) | 18, 602, 821, 1114 |
| AcoI | YGGCCR | 2 cut(s) | 741, 1404 |
| AcsI | RAATTY | 2 cut(s) | 1026, 1447 |
| AcuI | CTGAAG | 1 cut(s) | 1530 |
| AcyI | GRCGYC | 2 cut(s) | 1365, 1467 |
| AfaI | GTAC | 7 cut(s) | 62, 728, 898, 932, 1076, 1226, 1424 |
| AfiI | CCNNNNNNNGG | 3 cut(s) | 909, 1129, 1436 |
| AflIII | ACRYGT | 1 cut(s) | 207 |
| AgsI | TTSAA | 4 cut(s) | 815, 1013, 1032, 1195 |
| AjnI | CCWGG | 2 cut(s) | 1069, 1429 |
| Alw21I | GWGCWC | 1 cut(s) | 1020 |
| Alw26I | GTCTC | 4 cut(s) | 553, 710, 1403, 1541 |
| AlwI | GGATC | 4 cut(s) | 18, 602, 821, 1114 |
| Ama87I | CYCGRG | 1 cut(s) | 1529 |
| AoxI | GGCC | 5 cut(s) | 289, 741, 1089, 1347, 1404 |
| ApeKI | GCWGC | 9 cut(s) | 20, 196, 215, 500, 680, 989, 1334, 1337, 1385 |
| ApoI | RAATTY | 2 cut(s) | 1026, 1447 |
| Asp700I | GAANNNNTTC | 1 cut(s) | 810 |
| Asp718I | GGTACC | 3 cut(s) | 60, 896, 1422 |
| AspLEI | GCGC | 3 cut(s) | 179, 569, 1367 |
| AspS9I | GGNCC | 1 cut(s) | 1256 |
| AsuC2I | CCSGG | 2 cut(s) | 189, 1403 |
| AsuHPI | GGTGA | 4 cut(s) | 130, 290, 878, 1556 |
| AvaI | CYCGRG | 1 cut(s) | 1529 |
| AvaII | GGWCC | 1 cut(s) | 1256 |
| AxyI | CCTNAGG | 1 cut(s) | 630 |
| BaeGI | GKGCMC | 1 cut(s) | 1039 |
| BalI | TGGCCA | 1 cut(s) | 743 |
| BanI | GGYRCC | 5 cut(s) | 60, 589, 896, 1364, 1422 |
| BanII | GRGCYC | 2 cut(s) | 354, 1020 |
| BbsI | GAAGAC | 1 cut(s) | 813 |
| Bbv12I | GWGCWC | 1 cut(s) | 1020 |
| BbvI | GCAGC | 9 cut(s) | 7, 183, 227, 487, 667, 1001, 1321, 1349, 1372 |
| BccI | CCATC | 3 cut(s) | 134, 319, 1188 |
| BcgI | CGANNNNNNTGC | 2 cut(s) | 596, 630 |
| BciT130I | CCWGG | 2 cut(s) | 1071, 1431 |
| BclI | TGATCA | 1 cut(s) | 574 |
| BcnI | CCSGG | 2 cut(s) | 189, 1403 |
| BcoDI | GTCTC | 4 cut(s) | 553, 710, 1403, 1541 |
| BfaI | CTAG | 1 cut(s) | 6 |
| BfmI | CTRYAG | 5 cut(s) | 21, 934, 1021, 1335, 1356 |
| BfoI | RGCGCY | 1 cut(s) | 1368 |
| BglI | GCCNNNNNGGC | 1 cut(s) | 740 |
| Bme1390I | CCNGG | 4 cut(s) | 189, 1071, 1403, 1431 |
| Bme18I | GGWCC | 1 cut(s) | 1256 |
| BmeT110I | CYCGRG | 1 cut(s) | 1529 |
| BmgT120I | GGNCC | 1 cut(s) | 1256 |
| BmiI | GGNNCC | 6 cut(s) | 62, 591, 898, 1258, 1366, 1424 |
| BmrFI | CCNGG | 4 cut(s) | 189, 1071, 1403, 1431 |
| BmsI | GCATC | 3 cut(s) | 97, 353, 773 |
| BpiI | GAAGAC | 1 cut(s) | 813 |
| BpuMI | CCSGG | 2 cut(s) | 189, 1403 |
| Bsa29I | ATCGAT | 1 cut(s) | 1098 |
| BsaHI | GRCGYC | 2 cut(s) | 1365, 1467 |
| BsaJI | CCNNGG | 4 cut(s) | 148, 777, 892, 1070 |
| BsaXI | ACNNNNNCTCC | 4 cut(s) | 184, 214, 1344, 1374 |
| Bsc4I | CCNNNNNNNGG | 3 cut(s) | 909, 1129, 1436 |
| Bse1I | ACTGG | 2 cut(s) | 1082, 1190 |
| Bse21I | CCTNAGG | 1 cut(s) | 630 |
| Bse3DI | GCAATG | 1 cut(s) | 924 |
| BseBI | CCWGG | 2 cut(s) | 1071, 1431 |
| BseCI | ATCGAT | 1 cut(s) | 1098 |
| BseDI | CCNNGG | 4 cut(s) | 148, 777, 892, 1070 |
| BseLI | CCNNNNNNNGG | 3 cut(s) | 909, 1129, 1436 |
| BseMI | GCAATG | 1 cut(s) | 924 |
| BseMII | CTCAG | 4 cut(s) | 615, 644, 705, 1542 |
| BseNI | ACTGG | 2 cut(s) | 1082, 1190 |
| BseRI | GAGGAG | 2 cut(s) | 137, 1547 |
| BseSI | GKGCMC | 1 cut(s) | 1039 |
| BseX3I | CGGCCG | 1 cut(s) | 1404 |
| BseXI | GCAGC | 9 cut(s) | 7, 183, 227, 487, 667, 1001, 1321, 1349, 1372 |
| BseYI | CCCAGC | 2 cut(s) | 539, 1297 |
| BsgI | GTGCAG | 2 cut(s) | 1078, 1371 |
| Bsh1236I | CGCG | 1 cut(s) | 486 |
| Bsh1285I | CGRYCG | 3 cut(s) | 154, 1102, 1407 |
| BshFI | GGCC | 5 cut(s) | 291, 743, 1091, 1349, 1406 |
| BshNI | GGYRCC | 5 cut(s) | 60, 589, 896, 1364, 1422 |
| BshVI | ATCGAT | 1 cut(s) | 1098 |
| BsiEI | CGRYCG | 3 cut(s) | 154, 1102, 1407 |
| BsiHKAI | GWGCWC | 1 cut(s) | 1020 |
| BsiHKCI | CYCGRG | 1 cut(s) | 1529 |
| BsiSI | CCGG | 5 cut(s) | 189, 252, 371, 1350, 1403 |
| BslFI | GGGAC | 1 cut(s) | 659 |
| BslI | CCNNNNNNNGG | 3 cut(s) | 909, 1129, 1436 |
| BsmAI | GTCTC | 4 cut(s) | 553, 710, 1403, 1541 |
| BsmFI | GGGAC | 1 cut(s) | 659 |
| BsnI | GGCC | 5 cut(s) | 291, 743, 1091, 1349, 1406 |
| BsoBI | CYCGRG | 1 cut(s) | 1529 |
| Bsp1286I | GDGCHC | 3 cut(s) | 354, 1020, 1039 |
| Bsp143I | GATC | 8 cut(s) | 10, 115, 453, 574, 607, 826, 1099, 1119 |
| BspACI | CCGC | 5 cut(s) | 213, 240, 486, 762, 1427 |
| BspANI | GGCC | 5 cut(s) | 291, 743, 1091, 1349, 1406 |
| BspCNI | CTCAG | 4 cut(s) | 614, 643, 706, 1543 |
| BspDI | ATCGAT | 1 cut(s) | 1098 |
| BspFNI | CGCG | 1 cut(s) | 486 |
| BspHI | TCATGA | 1 cut(s) | 1143 |
| BspLI | GGNNCC | 6 cut(s) | 62, 591, 898, 1258, 1366, 1424 |
| BspMAI | CTGCAG | 2 cut(s) | 25, 1339 |
| BspPI | GGATC | 4 cut(s) | 18, 602, 821, 1114 |
| BspQI | GCTCTTC | 1 cut(s) | 1008 |
| BspT107I | GGYRCC | 5 cut(s) | 60, 589, 896, 1364, 1422 |
| BsrDI | GCAATG | 1 cut(s) | 924 |
| BsrI | ACTGG | 2 cut(s) | 1082, 1190 |
| BssECI | CCNNGG | 4 cut(s) | 148, 777, 892, 1070 |
| BssMI | GATC | 8 cut(s) | 10, 115, 453, 574, 607, 826, 1099, 1119 |
| BssNI | GRCGYC | 2 cut(s) | 1365, 1467 |
| BssT1I | CCWWGG | 2 cut(s) | 777, 892 |
| Bst2UI | CCWGG | 2 cut(s) | 1071, 1431 |
| Bst4CI | ACNGT | 4 cut(s) | 227, 1087, 1150, 1500 |
| Bst6I | CTCTTC | 2 cut(s) | 125, 1008 |
| BstACI | GRCGYC | 2 cut(s) | 1365, 1467 |
| BstC8I | GCNNGC | 5 cut(s) | 194, 272, 871, 1284, 1487 |
| BstDEI | CTNAG | 5 cut(s) | 366, 601, 630, 714, 1551 |
| BstFNI | CGCG | 1 cut(s) | 486 |
| BstH2I | RGCGCY | 1 cut(s) | 1368 |
| BstHHI | GCGC | 3 cut(s) | 179, 569, 1367 |
| BstKTI | GATC | 8 cut(s) | 13, 118, 456, 577, 610, 829, 1102, 1122 |
| BstMAI | GTCTC | 4 cut(s) | 553, 710, 1403, 1541 |
| BstMBI | GATC | 8 cut(s) | 10, 115, 453, 574, 607, 826, 1099, 1119 |
| BstMCI | CGRYCG | 3 cut(s) | 154, 1102, 1407 |
| BstNI | CCWGG | 2 cut(s) | 1071, 1431 |
| BstNSI | RCATGY | 1 cut(s) | 1489 |
| BstSCI | CCNGG | 4 cut(s) | 187, 1069, 1401, 1429 |
| BstSFI | CTRYAG | 5 cut(s) | 21, 934, 1021, 1335, 1356 |
| BstSLI | GKGCMC | 1 cut(s) | 1039 |
| BstUI | CGCG | 1 cut(s) | 486 |
| BstV1I | GCAGC | 9 cut(s) | 7, 183, 227, 487, 667, 1001, 1321, 1349, 1372 |
| BstV2I | GAAGAC | 1 cut(s) | 813 |
| BstX2I | RGATCY | 1 cut(s) | 826 |
| BstXI | CCANNNNNNTGG | 1 cut(s) | 1077 |
| BstYI | RGATCY | 1 cut(s) | 826 |
| BstZI | CGGCCG | 1 cut(s) | 1404 |
| Bsu15I | ATCGAT | 1 cut(s) | 1098 |
| Bsu36I | CCTNAGG | 1 cut(s) | 630 |
| BsuRI | GGCC | 5 cut(s) | 291, 743, 1091, 1349, 1406 |
| BsuTUI | ATCGAT | 1 cut(s) | 1098 |
| BtsI | GCAGTG | 3 cut(s) | 30, 62, 729 |
| BtsIMutI | CAGTG | 7 cut(s) | 30, 62, 729, 973, 1155, 1183, 1496 |
| Cac8I | GCNNGC | 5 cut(s) | 194, 272, 871, 1284, 1487 |
| CciI | TCATGA | 1 cut(s) | 1143 |
| CfoI | GCGC | 3 cut(s) | 179, 569, 1367 |
| Cfr13I | GGNCC | 1 cut(s) | 1256 |
| ClaI | ATCGAT | 1 cut(s) | 1098 |
| CseI | GACGC | 3 cut(s) | 61, 1424, 1456 |
| Csp6I | GTAC | 7 cut(s) | 61, 727, 897, 931, 1075, 1225, 1423 |
| CviAII | CATG | 9 cut(s) | 457, 514, 820, 878, 1000, 1144, 1156, 1322, 1486 |
| CviQI | GTAC | 7 cut(s) | 61, 727, 897, 931, 1075, 1225, 1423 |
| DdeI | CTNAG | 5 cut(s) | 366, 601, 630, 714, 1551 |
| DinI | GGCGCC | 1 cut(s) | 1366 |
| DpnI | GATC | 8 cut(s) | 12, 117, 455, 576, 609, 828, 1101, 1121 |
| DpnII | GATC | 8 cut(s) | 10, 115, 453, 574, 607, 826, 1099, 1119 |
| EaeI | YGGCCR | 2 cut(s) | 741, 1404 |
| EagI | CGGCCG | 1 cut(s) | 1404 |
| Eam1104I | CTCTTC | 2 cut(s) | 125, 1008 |
| EarI | CTCTTC | 2 cut(s) | 125, 1008 |
| Ecl136II | GAGCTC | 1 cut(s) | 1018 |
| EclXI | CGGCCG | 1 cut(s) | 1404 |
| Eco130I | CCWWGG | 2 cut(s) | 777, 892 |
| Eco24I | GRGCYC | 2 cut(s) | 354, 1020 |
| Eco47I | GGWCC | 1 cut(s) | 1256 |
| Eco52I | CGGCCG | 1 cut(s) | 1404 |
| Eco53kI | GAGCTC | 1 cut(s) | 1018 |
| Eco57I | CTGAAG | 1 cut(s) | 1530 |
| Eco81I | CCTNAGG | 1 cut(s) | 630 |
| Eco88I | CYCGRG | 1 cut(s) | 1529 |
| EcoICRI | GAGCTC | 1 cut(s) | 1018 |
| EcoRI | GAATTC | 1 cut(s) | 1447 |
| EcoRII | CCWGG | 2 cut(s) | 1069, 1429 |
| EcoT14I | CCWWGG | 2 cut(s) | 777, 892 |
| EcoT38I | GRGCYC | 2 cut(s) | 354, 1020 |
| EgeI | GGCGCC | 1 cut(s) | 1366 |
| EheI | GGCGCC | 1 cut(s) | 1366 |
| ErhI | CCWWGG | 2 cut(s) | 777, 892 |
| FaeI | CATG | 9 cut(s) | 460, 517, 823, 881, 1003, 1147, 1159, 1325, 1489 |
| FaqI | GGGAC | 1 cut(s) | 659 |
| FatI | CATG | 9 cut(s) | 456, 513, 819, 877, 999, 1143, 1155, 1321, 1485 |
| FauI | CCCGC | 2 cut(s) | 479, 1434 |
| FbaI | TGATCA | 1 cut(s) | 574 |
| FblI | GTMKAC | 1 cut(s) | 1313 |
| FriOI | GRGCYC | 2 cut(s) | 354, 1020 |
| FspBI | CTAG | 1 cut(s) | 6 |
| GlaI | GCGC | 3 cut(s) | 178, 568, 1366 |
| GsaI | CCCAGC | 2 cut(s) | 543, 1301 |
| HaeII | RGCGCY | 1 cut(s) | 1368 |
| HaeIII | GGCC | 5 cut(s) | 291, 743, 1091, 1349, 1406 |
| HapII | CCGG | 5 cut(s) | 189, 252, 371, 1350, 1403 |
| HgaI | GACGC | 3 cut(s) | 61, 1424, 1456 |
| HhaI | GCGC | 3 cut(s) | 179, 569, 1367 |
| Hin1I | GRCGYC | 2 cut(s) | 1365, 1467 |
| Hin1II | CATG | 9 cut(s) | 460, 517, 823, 881, 1003, 1147, 1159, 1325, 1489 |
| Hin6I | GCGC | 3 cut(s) | 177, 567, 1365 |
| HinP1I | GCGC | 3 cut(s) | 177, 567, 1365 |
| HincII | GTYRAC | 1 cut(s) | 223 |
| HindII | GTYRAC | 1 cut(s) | 223 |
| HinfI | GANTC | 3 cut(s) | 481, 529, 800 |
| HpaI | GTTAAC | 1 cut(s) | 223 |
| HpaII | CCGG | 5 cut(s) | 189, 252, 371, 1350, 1403 |
| HphI | GGTGA | 4 cut(s) | 130, 290, 878, 1556 |
| Hpy166II | GTNNAC | 6 cut(s) | 223, 729, 855, 1083, 1314, 1494 |
| Hpy188I | TCNGA | 6 cut(s) | 324, 463, 769, 805, 1119, 1256 |
| Hpy188III | TCNNGA | 4 cut(s) | 797, 830, 856, 1144 |
| Hpy8I | GTNNAC | 6 cut(s) | 223, 729, 855, 1083, 1314, 1494 |
| HpyAV | CCTTC | 7 cut(s) | 142, 368, 853, 1102, 1104, 1282, 1378 |
| HpyCH4III | ACNGT | 4 cut(s) | 227, 1087, 1150, 1500 |
| HpyCH4IV | ACGT | 4 cut(s) | 207, 810, 960, 1235 |
| HpyCH4V | TGCA | 9 cut(s) | 23, 35, 344, 517, 971, 1059, 1169, 1337, 1388 |
| HpyF3I | CTNAG | 5 cut(s) | 366, 601, 630, 714, 1551 |
| HpySE526I | ACGT | 4 cut(s) | 207, 810, 960, 1235 |
| Hsp92I | GRCGYC | 2 cut(s) | 1365, 1467 |
| Hsp92II | CATG | 9 cut(s) | 460, 517, 823, 881, 1003, 1147, 1159, 1325, 1489 |
| HspAI | GCGC | 3 cut(s) | 177, 567, 1365 |
| KasI | GGCGCC | 1 cut(s) | 1364 |
| KpnI | GGTACC | 3 cut(s) | 64, 900, 1426 |
| Ksp22I | TGATCA | 1 cut(s) | 574 |
| KspAI | GTTAAC | 1 cut(s) | 223 |
| Kzo9I | GATC | 8 cut(s) | 10, 115, 453, 574, 607, 826, 1099, 1119 |
| LguI | GCTCTTC | 1 cut(s) | 1008 |
| LmnI | GCTCC | 3 cut(s) | 150, 668, 1352 |
| Lsp1109I | GCAGC | 9 cut(s) | 7, 183, 227, 487, 667, 1001, 1321, 1349, 1372 |
| LweI | GCATC | 3 cut(s) | 97, 353, 773 |
| MaeI | CTAG | 1 cut(s) | 6 |
| MaeII | ACGT | 4 cut(s) | 207, 810, 960, 1235 |
| MaeIII | GTNAC | 2 cut(s) | 136, 278 |
| MalI | GATC | 8 cut(s) | 12, 117, 455, 576, 609, 828, 1101, 1121 |
| MboI | GATC | 8 cut(s) | 10, 115, 453, 574, 607, 826, 1099, 1119 |
| MboII | GAAGA | 8 cut(s) | 112, 818, 836, 1025, 1234, 1285, 1456, 1471 |
| MflI | RGATCY | 1 cut(s) | 826 |
| MhlI | GDGCHC | 3 cut(s) | 354, 1020, 1039 |
| MlsI | TGGCCA | 1 cut(s) | 743 |
| MluCI | AATT | 5 cut(s) | 555, 1026, 1170, 1249, 1447 |
| MluNI | TGGCCA | 1 cut(s) | 743 |
| Mly113I | GGCGCC | 1 cut(s) | 1365 |
| MlyI | GAGTC | 1 cut(s) | 475 |
| MmeI | TCCRAC | 1 cut(s) | 1147 |
| MnlI | CCTC | 7 cut(s) | 158, 210, 639, 899, 1302, 1525, 1546 |
| Mox20I | TGGCCA | 1 cut(s) | 743 |
| MroXI | GAANNNNTTC | 1 cut(s) | 810 |
| MscI | TGGCCA | 1 cut(s) | 743 |
| MseI | TTAA | 3 cut(s) | 30, 222, 792 |
| MslI | CAYNNNNRTG | 2 cut(s) | 323, 1148 |
| Msp20I | TGGCCA | 1 cut(s) | 743 |
| MspA1I | CMGCKG | 3 cut(s) | 218, 539, 1334 |
| MspI | CCGG | 5 cut(s) | 189, 252, 371, 1350, 1403 |
| MspR9I | CCNGG | 4 cut(s) | 189, 1071, 1403, 1431 |
| MvaI | CCWGG | 2 cut(s) | 1071, 1431 |
| MvnI | CGCG | 1 cut(s) | 486 |
| NarI | GGCGCC | 1 cut(s) | 1365 |
| NciI | CCSGG | 2 cut(s) | 189, 1403 |
| NdeII | GATC | 8 cut(s) | 10, 115, 453, 574, 607, 826, 1099, 1119 |
| NlaIII | CATG | 9 cut(s) | 460, 517, 823, 881, 1003, 1147, 1159, 1325, 1489 |
| NlaIV | GGNNCC | 6 cut(s) | 62, 591, 898, 1258, 1366, 1424 |
| NmeAIII | GCCGAG | 1 cut(s) | 1432 |
| NmuCI | GTSAC | 2 cut(s) | 136, 278 |
| NspI | RCATGY | 1 cut(s) | 1489 |
| PaeI | GCATGC | 1 cut(s) | 1489 |
| PaeR7I | CTCGAG | 1 cut(s) | 1529 |
| PagI | TCATGA | 1 cut(s) | 1143 |
| PciSI | GCTCTTC | 1 cut(s) | 1008 |
| PdmI | GAANNNNTTC | 1 cut(s) | 810 |
| PfeI | GAWTC | 2 cut(s) | 529, 800 |
| PflMI | CCANNNNNTGG | 2 cut(s) | 909, 1129 |
| Ple19I | CGATCG | 1 cut(s) | 1102 |
| PleI | GAGTC | 1 cut(s) | 475 |
| PluTI | GGCGCC | 1 cut(s) | 1368 |
| PpsI | GAGTC | 1 cut(s) | 475 |
| Psp124BI | GAGCTC | 1 cut(s) | 1020 |
| Psp6I | CCWGG | 2 cut(s) | 1069, 1429 |
| PspFI | CCCAGC | 2 cut(s) | 539, 1297 |
| PspGI | CCWGG | 2 cut(s) | 1069, 1429 |
| PspN4I | GGNNCC | 6 cut(s) | 62, 591, 898, 1258, 1366, 1424 |
| PspPI | GGNCC | 1 cut(s) | 1256 |
| PspXI | VCTCGAGB | 1 cut(s) | 1529 |
| PstI | CTGCAG | 2 cut(s) | 25, 1339 |
| PsuI | RGATCY | 1 cut(s) | 826 |
| PvuI | CGATCG | 1 cut(s) | 1102 |
| PvuII | CAGCTG | 3 cut(s) | 218, 539, 1334 |
| RsaI | GTAC | 7 cut(s) | 62, 728, 898, 932, 1076, 1226, 1424 |
| RsaNI | GTAC | 7 cut(s) | 61, 727, 897, 931, 1075, 1225, 1423 |
| RseI | CAYNNNNRTG | 2 cut(s) | 323, 1148 |
| SacI | GAGCTC | 1 cut(s) | 1020 |
| SapI | GCTCTTC | 1 cut(s) | 1008 |
| SaqAI | TTAA | 3 cut(s) | 30, 222, 792 |
| Sau3AI | GATC | 8 cut(s) | 10, 115, 453, 574, 607, 826, 1099, 1119 |
| Sau96I | GGNCC | 1 cut(s) | 1256 |
| SchI | GAGTC | 1 cut(s) | 475 |
| ScrFI | CCNGG | 4 cut(s) | 189, 1071, 1403, 1431 |
| SduI | GDGCHC | 3 cut(s) | 354, 1020, 1039 |
| SfaNI | GCATC | 3 cut(s) | 97, 353, 773 |
| SfcI | CTRYAG | 5 cut(s) | 21, 934, 1021, 1335, 1356 |
| SfoI | GGCGCC | 1 cut(s) | 1366 |
| Sfr274I | CTCGAG | 1 cut(s) | 1529 |
| SinI | GGWCC | 1 cut(s) | 1256 |
| SlaI | CTCGAG | 1 cut(s) | 1529 |
| SmiMI | CAYNNNNRTG | 2 cut(s) | 323, 1148 |
| SmlI | CTYRAG | 1 cut(s) | 1529 |
| SmoI | CTYRAG | 1 cut(s) | 1529 |
| SphI | GCATGC | 1 cut(s) | 1489 |
| Sse9I | AATT | 5 cut(s) | 555, 1026, 1170, 1249, 1447 |
| SsiI | CCGC | 5 cut(s) | 213, 240, 486, 762, 1427 |
| SspDI | GGCGCC | 1 cut(s) | 1364 |
| SspMI | CTAG | 1 cut(s) | 6 |
| SstI | GAGCTC | 1 cut(s) | 1020 |
| StyD4I | CCNGG | 4 cut(s) | 187, 1069, 1401, 1429 |
| StyI | CCWWGG | 2 cut(s) | 777, 892 |
| TaaI | ACNGT | 4 cut(s) | 227, 1087, 1150, 1500 |
| TaiI | ACGT | 4 cut(s) | 210, 813, 963, 1238 |
| TaqI | TCGA | 5 cut(s) | 563, 606, 798, 1098, 1530 |
| TaqII | GACCGA | 1 cut(s) | 140 |
| TasI | AATT | 5 cut(s) | 555, 1026, 1170, 1249, 1447 |
| TatI | WGTACW | 1 cut(s) | 1224 |
| TauI | GCSGC | 2 cut(s) | 243, 764 |
| TfiI | GAWTC | 2 cut(s) | 529, 800 |
| Tru1I | TTAA | 3 cut(s) | 30, 222, 792 |
| Tru9I | TTAA | 3 cut(s) | 30, 222, 792 |
| TscAI | CASTG | 7 cut(s) | 30, 62, 736, 973, 1155, 1190, 1503 |
| TseFI | GTSAC | 2 cut(s) | 136, 278 |
| TseI | GCWGC | 9 cut(s) | 20, 196, 215, 500, 680, 989, 1334, 1337, 1385 |
| Tsp45I | GTSAC | 2 cut(s) | 136, 278 |
| TspDTI | ATGAA | 7 cut(s) | 484, 719, 1016, 1084, 1132, 1144, 1457 |
| TspRI | CASTG | 7 cut(s) | 30, 62, 736, 973, 1155, 1190, 1503 |
| Van91I | CCANNNNNTGG | 2 cut(s) | 909, 1129 |
| VpaK11BI | GGWCC | 1 cut(s) | 1256 |
| XapI | RAATTY | 2 cut(s) | 1026, 1447 |
| XceI | RCATGY | 1 cut(s) | 1489 |
| XhoI | CTCGAG | 1 cut(s) | 1529 |
| XmiI | GTMKAC | 1 cut(s) | 1313 |
| XmnI | GAANNNNTTC | 1 cut(s) | 810 |
| XspI | CTAG | 1 cut(s) | 6 |