AT2G33170
ERF Family

Belongs to the protein kinase superfamily. Ser Thr protein kinase family

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
arabidopsis_thaliana
2
OG0012839
Physical Location & Seq
Reverse (-)
14056100 .. 14060848
4749 bp
Loading structure...
UTR
Exon/CDS
Intron
AT2G33170.1

Sequence Viewer

Length: 3375 bp
ATGGGTTGGTGGATCTTTGAGTTTAAGAAAGAATCAAAATCTATGTTTGTTGGGGTTTTGTTTCTCTTGACTCTTCTGGTTTGGACTTCAGAGAGTTTGAATAGTGATGGTCAGTTTCTCTTGGAGTTGAAGAACAGAGGATTTCAAGATTCGTTGAACCGTTTACATAATTGGAACGGCATTGACGAGACGCCGTGTAATTGGATAGGTGTGAATTGCAGCTCACAAGGCAGTAGTAGTAGTAGTAATAGTCTGGTGGTGACATCTCTTGATTTGAGTTCTATGAATCTCTCTGGGATAGTAAGTCCTAGCATTGGTGGTTTAGTTAACTTGGTCTATCTTAACCTCGCGTACAACGCGTTAACCGGAGATATTCCTCGGGAGATTGGAAACTGTTCGAAGCTGGAGGTTATGTTTTTGAACAATAACCAGTTTGGTGGTTCCATTCCAGTCGAGATCAACAAGTTATCGCAGTTGAGAAGTTTCAACATTTGCAATAACAAGCTTTCAGGTCCTTTGCCAGAAGAGATTGGTGATTTATACAATCTAGAAGAGCTTGTGGCTTATACTAATAACTTGACCGGTCCATTGCCTCGTTCTTTAGGAAATCTCAACAAGTTGACGACATTTCGAGCAGGGCAGAACGATTTCTCGGGGAATATACCTACTGAAATTGGTAAATGTCTTAACTTGAAGTTGCTCGGTCTTGCTCAGAATTTCATTTCTGGAGAGCTTCCCAAGGAAATTGGGATGCTTGTTAAACTTCAGGAGGTGATTCTGTGGCAGAACAAGTTTTCAGGGTTTATTCCGAAAGATATTGGGAATTTAACAAGTCTTGAGACTCTTGCTTTGTACGGTAACTCATTGGTTGGACCTATACCATCAGAGATTGGTAACATGAAGTCCTTGAAGAAGCTCTATCTTTACCAAAACCAGTTGAATGGGACTATCCCAAAGGAGCTTGGAAAGCTTTCCAAAGTAATGGAAATCGATTTCTCGGAGAATTTGTTGAGTGGGGAGATTCCAGTTGAGCTGAGCAAGATCAGTGAGTTGAGGCTGCTCTATTTGTTTCAGAACAAGTTAACTGGAATCATACCAAATGAGCTCAGTAAGTTGAGGAATTTGGCGAAACTCGATCTCTCCATCAACTCCTTAACCGGTCCTATTCCACCGGGTTTCCAGAATCTTACGTCTATGCGCCAACTTCAGCTTTTCCACAATTCCCTCAGTGGTGTAATCCCTCAAGGTCTTGGTTTGTACAGTCCTCTATGGGTTGTTGACTTCTCAGAAAACCAACTTTCAGGAAAAATACCGCCTTTTATCTGTCAACAGTCTAATCTCATTCTGTTGAATCTCGGGTCTAACAGGATATTTGGAAATATTCCACCAGGTGTATTGCGCTGCAAATCTCTGCTGCAGCTTCGTGTTGTTGGAAACCGACTCACTGGTCAGTTTCCGACTGAGTTATGCAAGCTTGTCAACCTTTCTGCTATTGAGTTGGATCAAAACCGGTTTAGCGGACCACTACCTCCTGAGATAGGCACGTGTCAGAAGCTGCAAAGACTTCATCTTGCAGCTAACCAATTTTCCTCTAATCTACCCAACGAAATCAGTAAACTCTCCAACCTGGTAACATTTAACGTTTCCTCAAACTCTCTCACTGGACCAATCCCCTCTGAAATAGCCAACTGTAAAATGCTTCAACGACTTGACTTGAGCCGGAACAGTTTCATCGGTTCTTTACCTCCCGAGCTTGGAAGCCTTCATCAGCTCGAGATACTCAGACTCTCAGAAAATAGATTCTCTGGCAACATACCGTTTACCATTGGAAACCTTACCCATCTAACTGAGCTGCAGATGGGAGGAAACTTGTTTTCAGGAAGTATACCGCCTCAACTCGGTTTACTCTCGAGTCTGCAGATTGCAATGAACCTGAGCTACAATGATTTCAGTGGTGAAATACCTCCCGAGATCGGGAATCTTCATCTGCTAATGTACCTATCTCTGAACAACAACCATCTCAGCGGCGAAATCCCGACCACATTCGAGAACTTATCCAGTTTACTCGGGTGCAACTTTTCCTACAACAACCTCACCGGACAGCTTCCACATACGCAGATCTTTCAAAACATGACTCTAACCAGTTTTCTCGGAAACAAAGGACTCTGTGGCGGCCATTTGAGAAGCTGTGACCCTAGCCACTCCTCTTGGCCTCACATTTCATCTCTAAAAGCGGGTTCTGCTCGGAGGGGGAGAATCATCATCATCGTGTCTTCAGTCATTGGCGGTATCTCTCTTTTACTAATCGCGATTGTCGTTCATTTCCTAAGAAATCCCGTGGAACCAACGGCTCCTTATGTGCACGACAAGGAACCCTTTTTTCAAGAATCCGACATTTACTTTGTCCCGAAAGAACGATTCACAGTCAAAGACATTTTGGAAGCAACAAAAGGCTTCCACGATAGCTACATTGTCGGTAGAGGCGCTTGCGGGACCGTTTACAAAGCAGTTATGCCTTCAGGTAAAACAATAGCAGTTAAAAAACTCGAATCCAACAGAGAAGGCAACAACAACAACAGCAACAACACTGATAACAGTTTCCGCGCCGAGATTCTAACACTAGGCAAAATCCGTCACAGGAACATTGTCAGGCTATACAGTTTCTGTTACCACCAAGGATCAAACTCGAACCTCTTGCTCTACGAATACATGTCTCGGGGAAGCCTTGGCGAGTTACTTCACGGCGGGAAATCACATAGCATGGATTGGCCAACTCGGTTTGCTATCGCACTCGGTGCAGCGGAAGGTCTCGCTTACTTACATCATGATTGTAAACCAAGAATCATTCACCGTGACATCAAATCGAATAACATTCTCATCGATGAGAATTTCGAAGCCCATGTTGGAGATTTCGGGTTAGCAAAAGTCATCGACATGCCACTATCAAAATCCGTCTCAGCCGTTGCTGGATCCTACGGTTACATCGCTCCCGAGTATGCATACACAATGAAAGTAACAGAGAAATGCGATATCTACAGCTTTGGAGTTGTTCTTCTTGAATTGTTAACCGGGAAAGCTCCGGTTCAGCCGCTAGAGCAAGGCGGAGATCTTGCCACGTGGACAAGAAACCATATCAGAGATCATTCGTTAACATCTGAAATCCTTGATCCTTATCTAACAAAGGTAGAGGACGATGTGATTCTCAATCATATGATCACAGTGACGAAAATTGCCGTGCTCTGTACGAAATCTTCGCCGTCTGATCGACCGACGATGAGAGAAGTAGTGTTGATGCTTATAGAGTCCGGTGAACGTGCCGGAAAAGTAATTGTGTCTACAACGTGCAGTGATTTACCTCCACCGGCGCCGCCGTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0005575 GO:0005623 GO:0005886 GO:0016020 GO:0044464 GO:0071944
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
LRRNT_2 LRR_1 LRR_8 Pkinase

Protein Analysis

1124

Amino Acids

123.72

Weight (kDa)

6.94

Isoelectric Point (pI)

37.22

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
LRRNT_2 PF08263 33 - 74 2.9e-08 Leucine rich repeat N-terminal domain
LRR_14 PF23598 81 - 211 1.3e-10 Leucine-rich repeat region
LRR_8 PF13855 87 - 145 9.2e-07 Leucine rich repeat
LRR_14 PF23598 223 - 331 8.5e-14 Leucine-rich repeat region
LRR_14 PF23598 488 - 573 4.5e-07 Leucine-rich repeat region
LRR_14 PF23598 556 - 639 6.9e-08 Leucine-rich repeat region
Pkinase PF00069 820 - 1096 9.6e-45 Protein kinase domain
PK_Tyr_Ser-Thr PF07714 825 - 1097 2e-39 Protein tyrosine and serine/threonine kinase
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready
iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0012839)

Species Orthologous Gene IDs
arabidopsis_thaliana AT2G33170 AT2G33170
fragaria_vesca FvH4_4g05590 FvH4_4g05590 FvH4_4g05590 FvH4_4g05590 FvH4_4g05590
malus_domestica MD16G1234300.v1.1
prunus_persica Prupe.1G057600_v2.0.a1
pyrus_communis pycom13g20210
rosa_chinensis RchiOBHm_Chr4g0396751
rosa_laevigata RLG00000009506
rosa_multiflora Rmu_sc0000487.1_g000004 Rmu_sc0003840.1_g000008
rosa_roxburghii Rroxscaffold_5G00341590
rosa_rugosa Rorug03G0347700
rosa_samantha Rh4BG069400
rosa_wichuraiana Rw4G005710

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 1 cut(s) 1446
AccB1I GGYRCC 1 cut(s) 3364
AccI GTMKAC 2 cut(s) 1885, 3335
AccII CGCG 4 cut(s) 350, 359, 2309, 2604
AclI AACGTT 1 cut(s) 1641
AclWI GGATC 6 cut(s) 20, 1509, 2686, 2964, 2977, 3161
AcoI YGGCCR 2 cut(s) 2173, 2768
AcsI RAATTY 5 cut(s) 715, 823, 1003, 1120, 2887
AcuI CTGAAG 5 cut(s) 72, 749, 1190, 2259, 2502
AcvI CACGTG 2 cut(s) 1545, 3117
AcyI GRCGYC 2 cut(s) 191, 3365
AdeI CACNNNGTG 2 cut(s) 1391, 2795
AfaI GTAC 5 cut(s) 353, 854, 1259, 1997, 3244
AfiI CCNNNNNNNGG 6 cut(s) 314, 1538, 1754, 1898, 1973, 1974
AflIII ACRYGT 3 cut(s) 357, 1544, 2709
AgeI ACCGGT 3 cut(s) 581, 1157, 1509
AjnI CCWGG 2 cut(s) 1387, 1626
AjuI GAANNNNNNNTTGG 2 cut(s) 2886, 2918
Alw21I GWGCWC 3 cut(s) 1107, 2364, 3240
Alw26I GTCTC 5 cut(s) 182, 833, 2718, 2813, 2959
Alw44I GTGCAC 1 cut(s) 2360
AlwI GGATC 6 cut(s) 20, 1509, 2686, 2964, 2977, 3161
AlwNI CAGNNNCTG 2 cut(s) 1555, 2664
AoxI GGCC 3 cut(s) 2173, 2210, 2768
ApaLI GTGCAC 1 cut(s) 2360
ApeKI GCWGC 9 cut(s) 219, 1057, 1401, 1414, 1417, 1555, 1574, 1852, 2798
ApoI RAATTY 5 cut(s) 715, 823, 1003, 1120, 2887
ArsI GACNNNNNNTTYG 4 cut(s) 832, 864, 2384, 2416
AsiGI ACCGGT 3 cut(s) 581, 1157, 1509
Asp700I GAANNNNTTC 4 cut(s) 394, 647, 970, 1727
AspLEI GCGC 5 cut(s) 1200, 1401, 2486, 2606, 3367
AspS9I GGNCC 7 cut(s) 512, 584, 872, 1160, 1520, 1664, 2493
AsuC2I CCSGG 2 cut(s) 1173, 3070
AsuHPI GGTGA 7 cut(s) 271, 545, 784, 1967, 2086, 2840, 3320
AsuII TTCGAA 2 cut(s) 398, 2892
AvaII GGWCC 7 cut(s) 512, 584, 872, 1160, 1520, 1664, 2493
BaeGI GKGCMC 1 cut(s) 2364
BalI TGGCCA 1 cut(s) 2770
BamHI GGATCC 1 cut(s) 2969
BanI GGYRCC 1 cut(s) 3364
BanII GRGCYC 1 cut(s) 1107
BarI GAAGNNNNNNTAC 2 cut(s) 3235, 3267
BbrPI CACGTG 2 cut(s) 1545, 3117
BbsI GAAGAC 1 cut(s) 2265
Bbv12I GWGCWC 3 cut(s) 1107, 2364, 3240
BbvI GCAGC 9 cut(s) 231, 1044, 1388, 1401, 1429, 1542, 1586, 1839, 2810
BccI CCATC 6 cut(s) 101, 889, 1151, 1848, 1852, 2025
BceAI ACGGC 8 cut(s) 178, 193, 2364, 2758, 2945, 3218, 3241, 3355
BcgI CGANNNNNNTGC 2 cut(s) 2677, 2711
BciT130I CCWGG 2 cut(s) 1389, 1628
BclI TGATCA 1 cut(s) 3213
BcnI CCSGG 2 cut(s) 1173, 3070
BcoDI GTCTC 5 cut(s) 182, 833, 2718, 2813, 2959
BfaI CTAG 5 cut(s) 309, 548, 2196, 2621, 3092
BfmI CTRYAG 4 cut(s) 1415, 1853, 1916, 3034
BfoI RGCGCY 2 cut(s) 2487, 3368
BglII AGATCT 2 cut(s) 2118, 3106
BlpI GCTNAGC 1 cut(s) 1034
Bme1390I CCNGG 4 cut(s) 1173, 1389, 1628, 3070
Bme18I GGWCC 7 cut(s) 512, 584, 872, 1160, 1520, 1664, 2493
BmgT120I GGNCC 7 cut(s) 512, 584, 872, 1160, 1520, 1664, 2493
BmiI GGNNCC 7 cut(s) 442, 2343, 2352, 2373, 2494, 2971, 3366
BmrFI CCNGG 4 cut(s) 1173, 1389, 1628, 3070
BmsI GCATC 2 cut(s) 741, 3282
BpiI GAAGAC 1 cut(s) 2265
BpmI CTGGAG 2 cut(s) 425, 747
Bpu10I CCTNAGC 1 cut(s) 1934
Bpu1102I GCTNAGC 1 cut(s) 1034
Bpu14I TTCGAA 2 cut(s) 398, 2892
BpuEI CTTGAG 3 cut(s) 857, 1227, 1735
BpuMI CCSGG 2 cut(s) 1173, 3070
Bsa29I ATCGAT 2 cut(s) 990, 2880
BsaAI YACGTR 2 cut(s) 1545, 3117
BsaBI GATNNNNATC 1 cut(s) 3171
BsaHI GRCGYC 2 cut(s) 191, 3365
BsaI GGTCTC 1 cut(s) 2813
BsaJI CCNNGG 5 cut(s) 377, 738, 2337, 2674, 2725
BsaWI WCCGGW 7 cut(s) 365, 581, 1157, 1509, 2096, 3079, 3305
BsaXI ACNNNNNCTCC 4 cut(s) 398, 428, 992, 1022
Bsc4I CCNNNNNNNGG 6 cut(s) 314, 1538, 1754, 1898, 1973, 1974
Bse118I RCCGGY 4 cut(s) 581, 1157, 1509, 3361
Bse1I ACTGG 9 cut(s) 430, 449, 934, 1025, 1090, 1450, 1666, 2058, 2142
Bse3DI GCAATG 2 cut(s) 587, 1932
Bse8I GATNNNNATC 1 cut(s) 3171
BseBI CCWGG 2 cut(s) 1389, 1628
BseCI ATCGAT 2 cut(s) 990, 2880
BseDI CCNNGG 5 cut(s) 377, 738, 2337, 2674, 2725
BseGI GGATG 1 cut(s) 756
BseJI GATNNNNATC 1 cut(s) 3171
BseLI CCNNNNNNNGG 6 cut(s) 314, 1538, 1754, 1898, 1973, 1974
BseMI GCAATG 2 cut(s) 587, 1932
BseNI ACTGG 9 cut(s) 430, 449, 934, 1025, 1090, 1450, 1666, 2058, 2142
BseRI GAGGAG 1 cut(s) 2194
BseSI GKGCMC 1 cut(s) 2364
BseXI GCAGC 9 cut(s) 231, 1044, 1388, 1401, 1429, 1542, 1586, 1839, 2810
BsgI GTGCAG 2 cut(s) 2817, 3364
Bsh1236I CGCG 4 cut(s) 350, 359, 2309, 2604
Bsh1285I CGRYCG 1 cut(s) 3269
BshFI GGCC 3 cut(s) 2175, 2212, 2770
BshNI GGYRCC 1 cut(s) 3364
BshTI ACCGGT 3 cut(s) 581, 1157, 1509
BshVI ATCGAT 2 cut(s) 990, 2880
BsiEI CGRYCG 1 cut(s) 3269
BsiHKAI GWGCWC 3 cut(s) 1107, 2364, 3240
BslFI GGGAC 3 cut(s) 958, 2390, 2506
BslI CCNNNNNNNGG 6 cut(s) 314, 1538, 1754, 1898, 1973, 1974
BsmAI GTCTC 5 cut(s) 182, 833, 2718, 2813, 2959
BsmBI CGTCTC 2 cut(s) 182, 2959
BsmFI GGGAC 3 cut(s) 958, 2390, 2506
BsnI GGCC 3 cut(s) 2175, 2212, 2770
Bso31I GGTCTC 1 cut(s) 2813
Bsp119I TTCGAA 2 cut(s) 398, 2892
Bsp1286I GDGCHC 3 cut(s) 1107, 2364, 3240
Bsp1407I TGTACA 1 cut(s) 1257
Bsp1720I GCTNAGC 1 cut(s) 1034
Bsp68I TCGCGA 1 cut(s) 2309
BspANI GGCC 3 cut(s) 2175, 2212, 2770
BspDI ATCGAT 2 cut(s) 990, 2880
BspFNI CGCG 4 cut(s) 350, 359, 2309, 2604
BspHI TCATGA 1 cut(s) 2824
BspLI GGNNCC 7 cut(s) 442, 2343, 2352, 2373, 2494, 2971, 3366
BspMAI CTGCAG 3 cut(s) 1419, 1857, 1920
BspPI GGATC 6 cut(s) 20, 1509, 2686, 2964, 2977, 3161
BspQI GCTCTTC 1 cut(s) 546
BspT104I TTCGAA 2 cut(s) 398, 2892
BspT107I GGYRCC 1 cut(s) 3364
BspTNI GGTCTC 1 cut(s) 2813
BsrDI GCAATG 2 cut(s) 587, 1932
BsrFI RCCGGY 4 cut(s) 581, 1157, 1509, 3361
BsrGI TGTACA 1 cut(s) 1257
BsrI ACTGG 9 cut(s) 430, 449, 934, 1025, 1090, 1450, 1666, 2058, 2142
BssAI RCCGGY 4 cut(s) 581, 1157, 1509, 3361
BssECI CCNNGG 5 cut(s) 377, 738, 2337, 2674, 2725
BssNAI GTATAC 1 cut(s) 1886
BssNI GRCGYC 2 cut(s) 191, 3365
BssT1I CCWWGG 3 cut(s) 738, 2674, 2725
Bst1107I GTATAC 1 cut(s) 1886
Bst2UI CCWGG 2 cut(s) 1389, 1628
Bst6I CTCTTC 3 cut(s) 78, 519, 546
BstACI GRCGYC 2 cut(s) 191, 3365
BstAPI GCANNNNNTGC 1 cut(s) 2795
BstAUI TGTACA 1 cut(s) 1257
BstBAI YACGTR 2 cut(s) 1545, 3117
BstBI TTCGAA 2 cut(s) 398, 2892
BstC8I GCNNGC 2 cut(s) 1472, 2488
BstDSI CCRYGG 1 cut(s) 2337
BstENI CCTNNNNNAGG 1 cut(s) 1536
BstF5I GGATG 1 cut(s) 756
BstFNI CGCG 4 cut(s) 350, 359, 2309, 2604
BstH2I RGCGCY 2 cut(s) 2487, 3368
BstHHI GCGC 5 cut(s) 1200, 1401, 2486, 2606, 3367
BstMAI GTCTC 5 cut(s) 182, 833, 2718, 2813, 2959
BstMCI CGRYCG 1 cut(s) 3269
BstMWI GCNNNNNNNGC 6 cut(s) 228, 356, 967, 2240, 2795, 3094
BstNI CCWGG 2 cut(s) 1389, 1628
BstNSI RCATGY 2 cut(s) 2713, 2938
BstSCI CCNGG 4 cut(s) 1171, 1387, 1626, 3068
BstSFI CTRYAG 4 cut(s) 1415, 1853, 1916, 3034
BstSLI GKGCMC 1 cut(s) 2364
BstUI CGCG 4 cut(s) 350, 359, 2309, 2604
BstV1I GCAGC 9 cut(s) 231, 1044, 1388, 1401, 1429, 1542, 1586, 1839, 2810
BstV2I GAAGAC 1 cut(s) 2265
BstX2I RGATCY 4 cut(s) 12, 2118, 2969, 3106
BstXI CCANNNNNNTGG 3 cut(s) 437, 941, 982
BstYI RGATCY 4 cut(s) 12, 2118, 2969, 3106
BstZ17I GTATAC 1 cut(s) 1886
Bsu15I ATCGAT 2 cut(s) 990, 2880
BsuRI GGCC 3 cut(s) 2175, 2212, 2770
BsuTUI ATCGAT 2 cut(s) 990, 2880
BtgI CCRYGG 1 cut(s) 2337
BtgZI GCGATG 1 cut(s) 2968
BtsCI GGATG 1 cut(s) 756
BtsI GCAGTG 1 cut(s) 3352
BtsIMutI CAGTG 8 cut(s) 1051, 1234, 1443, 1659, 1957, 2586, 3225, 3352
BtuMI TCGCGA 1 cut(s) 2309
Cac8I GCNNGC 2 cut(s) 1472, 2488
CaiI CAGNNNCTG 2 cut(s) 1555, 2664
CciI TCATGA 1 cut(s) 2824
CfoI GCGC 5 cut(s) 1200, 1401, 2486, 2606, 3367
Cfr10I RCCGGY 4 cut(s) 581, 1157, 1509, 3361
Cfr13I GGNCC 7 cut(s) 512, 584, 872, 1160, 1520, 1664, 2493
ClaI ATCGAT 2 cut(s) 990, 2880
CseI GACGC 1 cut(s) 199
CsiI ACCWGGT 2 cut(s) 1387, 1626
Csp6I GTAC 5 cut(s) 352, 853, 1258, 1996, 3243
CspAI ACCGGT 3 cut(s) 581, 1157, 1509
CspCI CAANNNNNGTGG 2 cut(s) 2189, 2224
CviAII CATG 7 cut(s) 898, 2131, 2710, 2761, 2825, 2900, 2935
CviQI GTAC 5 cut(s) 352, 853, 1258, 1996, 3243
DinI GGCGCC 1 cut(s) 3366
DraIII CACNNNGTG 2 cut(s) 1391, 2795
DrdI GACNNNNNNGTC 1 cut(s) 1446
DseDI GACNNNNNNGTC 1 cut(s) 1446
EaeI YGGCCR 2 cut(s) 2173, 2768
Eam1104I CTCTTC 3 cut(s) 78, 519, 546
EarI CTCTTC 3 cut(s) 78, 519, 546
EciI GGCGGA 1 cut(s) 3117
Ecl136II GAGCTC 1 cut(s) 1105
Eco130I CCWWGG 3 cut(s) 738, 2674, 2725
Eco24I GRGCYC 1 cut(s) 1107
Eco31I GGTCTC 1 cut(s) 2813
Eco32I GATATC 1 cut(s) 3031
Eco47I GGWCC 7 cut(s) 512, 584, 872, 1160, 1520, 1664, 2493
Eco53kI GAGCTC 1 cut(s) 1105
Eco57I CTGAAG 5 cut(s) 72, 749, 1190, 2259, 2502
Eco72I CACGTG 2 cut(s) 1545, 3117
EcoICRI GAGCTC 1 cut(s) 1105
EcoNI CCTNNNNNAGG 1 cut(s) 1536
EcoO109I RGGNCCY 1 cut(s) 512
EcoRII CCWGG 2 cut(s) 1387, 1626
EcoRV GATATC 1 cut(s) 3031
EcoT14I CCWWGG 3 cut(s) 738, 2674, 2725
EcoT22I ATGCAT 1 cut(s) 3001
EcoT38I GRGCYC 1 cut(s) 1107
EgeI GGCGCC 1 cut(s) 3366
EheI GGCGCC 1 cut(s) 3366
ErhI CCWWGG 3 cut(s) 738, 2674, 2725
Esp3I CGTCTC 2 cut(s) 182, 2959
FaeI CATG 7 cut(s) 901, 2134, 2713, 2764, 2828, 2903, 2938
FalI AAGNNNNNCTT 2 cut(s) 2360, 2392
FaqI GGGAC 3 cut(s) 958, 2390, 2506
FatI CATG 7 cut(s) 897, 2130, 2709, 2760, 2824, 2899, 2934
FauI CCCGC 3 cut(s) 2227, 2483, 2738
FauNDI CATATG 1 cut(s) 3210
FbaI TGATCA 1 cut(s) 3213
FblI GTMKAC 2 cut(s) 1885, 3335
FokI GGATG 1 cut(s) 763
FriOI GRGCYC 1 cut(s) 1107
FspBI CTAG 5 cut(s) 309, 548, 2196, 2621, 3092
GlaI GCGC 5 cut(s) 1199, 1400, 2485, 2605, 3366
GsuI CTGGAG 2 cut(s) 425, 747
HaeII RGCGCY 2 cut(s) 2487, 3368
HaeIII GGCC 3 cut(s) 2175, 2212, 2770
HgaI GACGC 1 cut(s) 199
HhaI GCGC 5 cut(s) 1200, 1401, 2486, 2606, 3367
Hin1I GRCGYC 2 cut(s) 191, 3365
Hin1II CATG 7 cut(s) 901, 2134, 2713, 2764, 2828, 2903, 2938
Hin6I GCGC 5 cut(s) 1198, 1399, 2484, 2604, 3365
HinP1I GCGC 5 cut(s) 1198, 1399, 2484, 2604, 3365
HincII GTYRAC 9 cut(s) 328, 363, 621, 1083, 1279, 1328, 1480, 3066, 3150
HindII GTYRAC 9 cut(s) 328, 363, 621, 1083, 1279, 1328, 1480, 3066, 3150
HindIII AAGCTT 3 cut(s) 503, 968, 1472
HpaI GTTAAC 5 cut(s) 328, 363, 1083, 3066, 3150
HphI GGTGA 7 cut(s) 271, 545, 784, 1967, 2086, 2840, 3320
Hpy99I CGWCG 1 cut(s) 3274
HpyAV CCTTC 4 cut(s) 1772, 2526, 2555, 2798
HpyCH4IV ACGT 6 cut(s) 1190, 1544, 1641, 3116, 3313, 3341
HpyF10VI GCNNNNNNNGC 6 cut(s) 228, 356, 967, 2240, 2795, 3094
HpySE526I ACGT 6 cut(s) 1190, 1544, 1641, 3116, 3313, 3341
Hsp92I GRCGYC 2 cut(s) 191, 3365
Hsp92II CATG 7 cut(s) 901, 2134, 2713, 2764, 2828, 2903, 2938
HspAI GCGC 5 cut(s) 1198, 1399, 2484, 2604, 3365
KasI GGCGCC 1 cut(s) 3364
Ksp22I TGATCA 1 cut(s) 3213
KspAI GTTAAC 5 cut(s) 328, 363, 1083, 3066, 3150
LguI GCTCTTC 1 cut(s) 546
LmnI GCTCC 4 cut(s) 958, 2356, 2992, 3082
Lsp1109I GCAGC 9 cut(s) 231, 1044, 1388, 1401, 1429, 1542, 1586, 1839, 2810
LweI GCATC 2 cut(s) 741, 3282
MabI ACCWGGT 2 cut(s) 1387, 1626
MaeI CTAG 5 cut(s) 309, 548, 2196, 2621, 3092
MaeII ACGT 6 cut(s) 1190, 1544, 1641, 3116, 3313, 3341
MboII GAAGA 9 cut(s) 65, 142, 536, 563, 922, 1973, 2265, 3044, 3243
MflI RGATCY 4 cut(s) 12, 2118, 2969, 3106
MhlI GDGCHC 3 cut(s) 1107, 2364, 3240
MlsI TGGCCA 1 cut(s) 2770
MluI ACGCGT 1 cut(s) 357
MluNI TGGCCA 1 cut(s) 2770
Mly113I GGCGCC 1 cut(s) 3365
MlyI GAGTC 8 cut(s) 64, 835, 1434, 1779, 1921, 2128, 2157, 3311
MmeI TCCRAC 8 cut(s) 850, 1411, 1479, 1481, 1647, 2415, 2577, 2884
Mox20I TGGCCA 1 cut(s) 2770
Mph1103I ATGCAT 1 cut(s) 3001
MroXI GAANNNNTTC 4 cut(s) 394, 647, 970, 1727
MscI TGGCCA 1 cut(s) 2770
MslI CAYNNNNRTG 2 cut(s) 2267, 2933
Msp20I TGGCCA 1 cut(s) 2770
MspA1I CMGCKG 2 cut(s) 2025, 2801
MspR9I CCNGG 4 cut(s) 1173, 1389, 1628, 3070
MvaI CCWGG 2 cut(s) 1389, 1628
MvnI CGCG 4 cut(s) 350, 359, 2309, 2604
MwoI GCNNNNNNNGC 6 cut(s) 228, 356, 967, 2240, 2795, 3094
NarI GGCGCC 1 cut(s) 3365
NciI CCSGG 2 cut(s) 1173, 3070
NdeI CATATG 1 cut(s) 3210
NlaIII CATG 7 cut(s) 901, 2134, 2713, 2764, 2828, 2903, 2938
NlaIV GGNNCC 7 cut(s) 442, 2343, 2352, 2373, 2494, 2971, 3366
NmeAIII GCCGAG 1 cut(s) 2632
NmuCI GTSAC 5 cut(s) 259, 2189, 2633, 2852, 3220
NruI TCGCGA 1 cut(s) 2309
NsiI ATGCAT 1 cut(s) 3001
NspI RCATGY 2 cut(s) 2713, 2938
NspV TTCGAA 2 cut(s) 398, 2892
PaeR7I CTCGAG 2 cut(s) 1772, 1909
PagI TCATGA 1 cut(s) 2824
PciI ACATGT 1 cut(s) 2709
PciSI GCTCTTC 1 cut(s) 546
PcsI WCGNNNNNNNCGW 2 cut(s) 183, 2313
PdmI GAANNNNTTC 4 cut(s) 394, 647, 970, 1727
PinAI ACCGGT 3 cut(s) 581, 1157, 1509
PleI GAGTC 8 cut(s) 64, 835, 1434, 1779, 1920, 2128, 2157, 3310
PluTI GGCGCC 1 cut(s) 3368
PmaCI CACGTG 2 cut(s) 1545, 3117
PmlI CACGTG 2 cut(s) 1545, 3117
PpsI GAGTC 8 cut(s) 64, 835, 1434, 1779, 1920, 2128, 2157, 3310
Ppu21I YACGTR 2 cut(s) 1545, 3117
PpuMI RGGWCCY 1 cut(s) 512
PscI ACATGT 1 cut(s) 2709
Psp124BI GAGCTC 1 cut(s) 1107
Psp1406I AACGTT 1 cut(s) 1641
Psp5II RGGWCCY 1 cut(s) 512
Psp6I CCWGG 2 cut(s) 1387, 1626
PspCI CACGTG 2 cut(s) 1545, 3117
PspGI CCWGG 2 cut(s) 1387, 1626
PspN4I GGNNCC 7 cut(s) 442, 2343, 2352, 2373, 2494, 2971, 3366
PspPI GGNCC 7 cut(s) 512, 584, 872, 1160, 1520, 1664, 2493
PspPPI RGGWCCY 1 cut(s) 512
PsrI GAACNNNNNNTAC 2 cut(s) 1922, 1954
PstI CTGCAG 3 cut(s) 1419, 1857, 1920
PstNI CAGNNNCTG 2 cut(s) 1555, 2664
PsuI RGATCY 4 cut(s) 12, 2118, 2969, 3106
RruI TCGCGA 1 cut(s) 2309
RsaI GTAC 5 cut(s) 353, 854, 1259, 1997, 3244
RsaNI GTAC 5 cut(s) 352, 853, 1258, 1996, 3243
RseI CAYNNNNRTG 2 cut(s) 2267, 2933
SacI GAGCTC 1 cut(s) 1107
SapI GCTCTTC 1 cut(s) 546
Sau96I GGNCC 7 cut(s) 512, 584, 872, 1160, 1520, 1664, 2493
SchI GAGTC 8 cut(s) 64, 835, 1434, 1779, 1921, 2128, 2157, 3311
ScrFI CCNGG 4 cut(s) 1173, 1389, 1628, 3070
SduI GDGCHC 3 cut(s) 1107, 2364, 3240
SexAI ACCWGGT 2 cut(s) 1387, 1626
SfaNI GCATC 2 cut(s) 741, 3282
SfcI CTRYAG 4 cut(s) 1415, 1853, 1916, 3034
SfoI GGCGCC 1 cut(s) 3366
Sfr274I CTCGAG 2 cut(s) 1772, 1909
SfuI TTCGAA 2 cut(s) 398, 2892
SgrAI CRCCGGYG 1 cut(s) 3361
SinI GGWCC 7 cut(s) 512, 584, 872, 1160, 1520, 1664, 2493
SlaI CTCGAG 2 cut(s) 1772, 1909
SmiMI CAYNNNNRTG 2 cut(s) 2267, 2933
SmlI CTYRAG 5 cut(s) 836, 1242, 1714, 1772, 1909
SmoI CTYRAG 5 cut(s) 836, 1242, 1714, 1772, 1909
SspDI GGCGCC 1 cut(s) 3364
SspI AATATT 1 cut(s) 1381
SspMI CTAG 5 cut(s) 309, 548, 2196, 2621, 3092
SstI GAGCTC 1 cut(s) 1107
StyD4I CCNGG 4 cut(s) 1171, 1387, 1626, 3068
StyI CCWWGG 3 cut(s) 738, 2674, 2725
TaiI ACGT 6 cut(s) 1193, 1547, 1644, 3119, 3316, 3344
TaqII GACCGA 2 cut(s) 692, 3283
TatI WGTACW 1 cut(s) 1257
TauI GCSGC 4 cut(s) 2028, 2175, 3091, 3370
TscAI CASTG 8 cut(s) 1051, 1234, 1450, 1666, 1957, 2593, 3225, 3352
TseFI GTSAC 5 cut(s) 259, 2189, 2633, 2852, 3220
TseI GCWGC 9 cut(s) 219, 1057, 1401, 1414, 1417, 1555, 1574, 1852, 2798
Tsp45I GTSAC 5 cut(s) 259, 2189, 2633, 2852, 3220
TspGWI ACGGA 2 cut(s) 2621, 2941
TspRI CASTG 8 cut(s) 1051, 1234, 1450, 1666, 1957, 2593, 3225, 3352
VneI GTGCAC 1 cut(s) 2360
VpaK11BI GGWCC 7 cut(s) 512, 584, 872, 1160, 1520, 1664, 2493
XagI CCTNNNNNAGG 1 cut(s) 1536
XapI RAATTY 5 cut(s) 715, 823, 1003, 1120, 2887
XbaI TCTAGA 1 cut(s) 547
XceI RCATGY 2 cut(s) 2713, 2938
XhoI CTCGAG 2 cut(s) 1772, 1909
XmiI GTMKAC 2 cut(s) 1885, 3335
XmnI GAANNNNTTC 4 cut(s) 394, 647, 970, 1727
XspI CTAG 5 cut(s) 309, 548, 2196, 2621, 3092
Zsp2I ATGCAT 1 cut(s) 3001
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.