AT2G39340

SAC3 GANP family protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
arabidopsis_thaliana
2
OG0009843
Physical Location & Seq
Forward (+)
16423541 .. 16430108
6568 bp
Loading structure...
UTR
Exon/CDS
Intron
AT2G39340.1

Sequence Viewer

Length: 3021 bp
ATGAATCACGGAGGGAACACTCAGGCCGTAGCACCAATGGACCCTAATTCCATTGAGAATCGATATGGTGTTGATGGAAGCCAAACACAGAAATATTCATATCAATACTCAACTGGGTCTGAAAGTGCCCCATGGACAGGGCATTCTGTTGAAAATCAGGCTGTGGAGAATGGGAACTATTCAAATTCAAACTATTACCATCCACAGCCGACAGGGCCAGCCACAGGCAATGTGCAAGAGATACCGAATACTGTATCCTTCACTATCTCATCGACGTCCGGAACTGCAAATGTGGCACAAGATTATAGTGGATATACGCCATACCAGACCTCTTCTGACCCACACAACTATTCAAACACGGGATATTCCAATTACTACAGTGGCTATCAACAGCAACCTAGCCAGTCATATCCTCAGCCTGTAGGGGCTTATCAAAACACAGGTGCTCCTCAGCCTCTTTCCTCATTTCAGAATCCAGGATCTTATGCTGGGACTCCAAGTTATTCAGGAACTTACTACAATCCTGCTGATTATCAGACTGCTGGAGGTTACCAAAGTACGAACTATAACAACCAAACGGCTGGAAGTTACCCAAGTACAAATTACAGCAATCAGACTCCTGCTTCGAACCAGGGAAACTATACGGATTACACCTCAAACCCTTATCAAAATTATACTCCTGATGCTGCTAACACACATAGCTCTACTATTGCGACCACACCACCTGTACATTATCAACAGAACTACCAACAATGGACAGAATATTACAGCCAAACAGAAGTCCCCTGTGCCCCAGGCACAGAAAAGCTGTCTACCCCAACCACAAGTGCATATAGTCAGAGCTTTCCAGTTCCTGGTGTTACTAGTGAAATGCCTGCTTCAAATAGTCAGCCTGCCCCGTCTTATGTCCAACCTTGGAGGCCGGAAACTGACTCATCCCATCCACCTTCTCAACAGCCTGGTGCAGCTGTTAGTACATCTAATGATACTTACTGGATGCATCAAGCACCAAGTCTGCAAGCTCATCATCCTGTTCCACCTCAAAATAATTACCAGAGTCCTCTGGAGACAAAACCTTTATACGAGACTCCCTTTCAGGGTCATCAGAGAGCTACATATCCTCAAGAGATGAACTCCCAGTCTTCCTTTCACCAGGCACCGTTAGGCTATCGCCAGCCTACTCAGACAGCACCGTTAGTGGATTCACAAAGGGTAAGCAAAGTACAGATTCCAACTAACCCTAGAATTGCTTCAAACTTGCCATCAGGTTTTACCAAAATGGATAAAGATAGTACAGCAGCCAGTGCAGCCCAAGCACCTGCATATGTTAGTGTTTCAATGCCAAAGCCTAAAGACCATACCACTGCTATGTCTGACCCTGGAACCTTCCCAAAATCGCTTCGTGGGTTTGTTGAGAGGGCTTTTGCCCGCTGCAAAGATGATAAAGAAAAGGAATCTTGCGAGGTTGCCCTGAGGAAGATTGTCAAAAAAGCAAAGGAGGATAATACTCTTTATACTCGAGATTGGGATACTGAGCCTCTCTCAACTGTCACGACCACAAATGTGACTAACTCTGAGTCAAGCTCCGCTCAGCTCTCTTCGTTACAAAATAAGAGCCCAACAAGACGACCCAAAAGTAGATGGGAGCCGTTGGTGGAAGGAAAACCTTTTGTGAAGCCAGCTTCAACTTTCAGCAGTGCTGTTAAATTTGGAGTTTGGAATCACCAAAATGAAAACAACAAAAAGAGCTCTGAGAGTTTTCAAAAGGTGGATGCTGCCACTGGCTTCAAGCCCACTTATTCTGGGCAAAATTCTGCAAAAAAAAGTTTCCAGCGGCCTGTCAAGCGACAGCGTTTTTCTGGTGGTGCAGCTACTGCCATTGATGATGAGGCATCTAGTGATAGTGACAAGGATTTGACACCTTACTATTCCAGTGCAATGGCACTTGCTGGTTCTGCCGAGGAAAAGAAGCGACGTGATAGTCGTTCCAAGCGTTTTGAAAAAATTCAAGGCCACAGCCGAGGGAATGATCTTACAAAACCTAAGAATGCAAATGTTGGAAATTTGCATTCTAGAAGAGCCACTGCCTTGAGGCTTAGCAAAGTTTTTGATGAAAGTGGCAGCAGAGCTGTGGAAGACATTGACTGGGATGCACTAACTGTTAAAGGCACTTGCCAGGAAATTGAGAAACGTTATCTCCGTCTGACTTCTGCGCCAGATCCTGCCACCGTAAGACCAGAGGATGTTTTGGAAAAAGCTCTGATAATGGTTCAGGATTCTCAAAAGAATTATCTTTTTAAATGTGATCAACTAAAGTCTATTCGCCAAGACCTCACAGTACAACGGATACACAATCATTTAACAGCTAAGGTTTATGAAACACATGCTAGATTAGCTTTGGAGGCAGGGGATTTACCTGAGTATAATCAGTGCCTGTCACAGTTAAAAACTCTTTATGCGGAAGGTGTAGAAGGATGCTCTCTGGAGTTTGCTGCGTACAGTCTACTCTATATTACTCTACACTCTAACAACAACCGAGAACTGCTATCATCCATGTCCAGATTATCCGAAGAAGATAAGAAGGATGAAGCAGTTAGACATGCTCTTTCAGTTCGTGCAGCTGTCACATCAGGGAATTATGTTATGTTCTTCAGACTCTACAAGACTGCACCAAACATGAATAGTTGCCTCATGGATCTCTATGTGGAGAAGATGCGTTACAAGGCTGTGAATTTTATGTCTCGTAGTTGTCGTCCTACAATCCCGGTCTCATACATAGTCCAAGTGTTGGGATTTACTGGTGCTGCAAGCGAAGGTACTGATGAAAAGGAGACCGATGGTATGGAGGACTGTTTGGAATGGCTAAAAACTCATGGTGCTAACATCATTACTGACAGCAACGGAGATATGCTTCTTGATACCAAGGCGACATCAACGAGTCTCTTCATGCCAGAACCCGAAGACGCAGTTGCTCATGGAGATCGAAATCTAGATGTCAATGATTTTTTTACACGTACATGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044424 GO:0044464
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
SAC3_GANP

Protein Analysis

1006

Amino Acids

111.26

Weight (kDa)

6.32

Isoelectric Point (pI)

46.22

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
SAC3_GANP PF03399 732 - 934 3.1e-23 SAC3/GANP family
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 1 cut(s) 1327
AasI GACNNNNNNGTC 1 cut(s) 1980
AatII GACGTC 1 cut(s) 278
Acc36I ACCTGC 1 cut(s) 1327
AccB1I GGYRCC 1 cut(s) 1156
AccB7I CCANNNNNTGG 2 cut(s) 854, 2788
AccBSI CCGCTC 1 cut(s) 1589
AccI GTMKAC 2 cut(s) 812, 2503
AccIII TCCGGA 1 cut(s) 278
AciI CCGC 4 cut(s) 1429, 1587, 1834, 2459
AclI AACGTT 1 cut(s) 2191
AclWI GGATC 3 cut(s) 487, 2213, 2703
AcsI RAATTY 6 cut(s) 184, 1706, 1810, 2004, 2062, 2731
AcuI CTGAAG 1 cut(s) 2635
AcyI GRCGYC 1 cut(s) 275
AfiI CCNNNNNNNGG 5 cut(s) 137, 224, 854, 1097, 2788
AflIII ACRYGT 1 cut(s) 3011
AhlI ACTAGT 1 cut(s) 863
AjiI CACGTC 1 cut(s) 1976
AjnI CCWGG 8 cut(s) 475, 630, 793, 853, 958, 1152, 1378, 2175
AleI CACNNNNGTG 1 cut(s) 1562
Alw21I GWGCWC 2 cut(s) 448, 1751
Alw26I GTCTC 6 cut(s) 1061, 1079, 2745, 2773, 2825, 2945
AlwI GGATC 3 cut(s) 487, 2213, 2703
AlwNI CAGNNNCTG 4 cut(s) 854, 1874, 2222, 2434
Ama87I CYCGRG 1 cut(s) 1518
Aor13HI TCCGGA 1 cut(s) 278
AoxI GGCC 5 cut(s) 24, 215, 920, 1835, 2011
ApoI RAATTY 6 cut(s) 184, 1706, 1810, 2004, 2062, 2731
ArsI GACNNNNNNTTYG 2 cut(s) 607, 639
Asp700I GAANNNNTTC 2 cut(s) 1249, 2004
AspLEI GCGC 1 cut(s) 2215
AspS9I GGNCC 2 cut(s) 40, 215
AsuC2I CCSGG 1 cut(s) 2765
AsuHPI GGTGA 2 cut(s) 1142, 1715
AsuII TTCGAA 1 cut(s) 626
AvaI CYCGRG 1 cut(s) 1518
AvaII GGWCC 1 cut(s) 40
AxyI CCTNAGG 1 cut(s) 1472
BaeGI GKGCMC 2 cut(s) 130, 793
BanI GGYRCC 1 cut(s) 1156
BanII GRGCYC 2 cut(s) 1619, 1751
BarI GAAGNNNNNNTAC 2 cut(s) 2702, 2734
BbsI GAAGAC 3 cut(s) 1134, 2142, 2967
Bbv12I GWGCWC 2 cut(s) 448, 1751
BbvCI CCTCAGC 2 cut(s) 414, 450
BccI CCATC 6 cut(s) 68, 207, 948, 1270, 1635, 2831
BceAI ACGGC 3 cut(s) 11, 594, 1633
BciT130I CCWGG 8 cut(s) 477, 632, 795, 855, 960, 1154, 1380, 2177
BciVI GTATCC 3 cut(s) 265, 1522, 2340
BclI TGATCA 1 cut(s) 2305
BcnI CCSGG 1 cut(s) 2765
BcoDI GTCTC 6 cut(s) 1061, 1079, 2745, 2773, 2825, 2945
BcuI ACTAGT 1 cut(s) 863
BfaI CTAG 7 cut(s) 399, 864, 1242, 1896, 2073, 2388, 2990
BfmI CTRYAG 2 cut(s) 376, 420
BfuAI ACCTGC 1 cut(s) 1327
BfuI GTATCC 3 cut(s) 265, 1522, 2340
BglI GCCNNNNNGGC 1 cut(s) 214
BlpI GCTNAGC 2 cut(s) 1590, 2096
Bme1390I CCNGG 9 cut(s) 477, 632, 795, 855, 960, 1154, 1380, 2177, 2765
Bme18I GGWCC 1 cut(s) 40
BmeT110I CYCGRG 1 cut(s) 1518
BmgBI CACGTC 1 cut(s) 1976
BmgT120I GGNCC 2 cut(s) 40, 215
BmiI GGNNCC 4 cut(s) 42, 1158, 1384, 1647
BmrFI CCNGG 9 cut(s) 477, 632, 795, 855, 960, 1154, 1380, 2177, 2765
BmrI ACTGGG 3 cut(s) 123, 1132, 2155
BmsI GCATC 8 cut(s) 673, 987, 1009, 1762, 1901, 2140, 2465, 2703
BmuI ACTGGG 3 cut(s) 123, 1132, 2155
BpiI GAAGAC 3 cut(s) 1134, 2142, 2967
BplI GAGNNNNNCTC 6 cut(s) 1118, 1150, 1526, 1558, 1568, 1600
BpmI CTGGAG 3 cut(s) 564, 1085, 2504
Bpu10I CCTNAGC 3 cut(s) 414, 450, 2367
Bpu1102I GCTNAGC 2 cut(s) 1590, 2096
Bpu14I TTCGAA 1 cut(s) 626
BpuEI CTTGAG 2 cut(s) 1107, 2110
BpuMI CCSGG 1 cut(s) 2765
Bsa29I ATCGAT 1 cut(s) 61
BsaAI YACGTR 1 cut(s) 3014
BsaBI GATNNNNATC 1 cut(s) 2985
BsaHI GRCGYC 1 cut(s) 275
BsaI GGTCTC 2 cut(s) 2773, 2825
BsaJI CCNNGG 8 cut(s) 131, 631, 793, 914, 1378, 1959, 2020, 2922
BsaWI WCCGGW 1 cut(s) 278
BsaXI ACNNNNNCTCC 4 cut(s) 430, 460, 2181, 2211
Bsc4I CCNNNNNNNGG 5 cut(s) 137, 224, 854, 1097, 2788
Bse21I CCTNAGG 1 cut(s) 1472
Bse3DI GCAATG 2 cut(s) 235, 1944
Bse8I GATNNNNATC 1 cut(s) 2985
BseAI TCCGGA 1 cut(s) 278
BseBI CCWGG 8 cut(s) 477, 632, 795, 855, 960, 1154, 1380, 2177
BseCI ATCGAT 1 cut(s) 61
BseDI CCNNGG 8 cut(s) 131, 631, 793, 914, 1378, 1959, 2020, 2922
BseJI GATNNNNATC 1 cut(s) 2985
BseLI CCNNNNNNNGG 5 cut(s) 137, 224, 854, 1097, 2788
BseMI GCAATG 2 cut(s) 235, 1944
BseRI GAGGAG 1 cut(s) 438
BseSI GKGCMC 2 cut(s) 130, 793
BseYI CCCAGC 1 cut(s) 488
BsgI GTGCAG 5 cut(s) 984, 1326, 1887, 2637, 2652
BshFI GGCC 5 cut(s) 26, 217, 922, 1837, 2013
BshNI GGYRCC 1 cut(s) 1156
BshVI ATCGAT 1 cut(s) 61
BsiHKAI GWGCWC 2 cut(s) 448, 1751
BsiHKCI CYCGRG 1 cut(s) 1518
BsiSI CCGG 3 cut(s) 279, 923, 2765
BslFI GGGAC 2 cut(s) 505, 767
BslI CCNNNNNNNGG 5 cut(s) 137, 224, 854, 1097, 2788
BsmAI GTCTC 6 cut(s) 1061, 1079, 2745, 2773, 2825, 2945
BsmFI GGGAC 2 cut(s) 505, 767
BsmI GAATGC 3 cut(s) 142, 2053, 2068
BsnI GGCC 5 cut(s) 26, 217, 922, 1837, 2013
Bso31I GGTCTC 2 cut(s) 2773, 2825
BsoBI CYCGRG 1 cut(s) 1518
Bsp119I TTCGAA 1 cut(s) 626
Bsp1286I GDGCHC 5 cut(s) 130, 448, 793, 1619, 1751
Bsp13I TCCGGA 1 cut(s) 278
Bsp1407I TGTACA 1 cut(s) 727
Bsp143I GATC 6 cut(s) 479, 2029, 2218, 2305, 2695, 2980
Bsp1720I GCTNAGC 2 cut(s) 1590, 2096
Bsp19I CCATGG 1 cut(s) 131
BspACI CCGC 4 cut(s) 1429, 1587, 1834, 2459
BspANI GGCC 5 cut(s) 26, 217, 922, 1837, 2013
BspDI ATCGAT 1 cut(s) 61
BspEI TCCGGA 1 cut(s) 278
BspLI GGNNCC 4 cut(s) 42, 1158, 1384, 1647
BspMI ACCTGC 1 cut(s) 1327
BspPI GGATC 3 cut(s) 487, 2213, 2703
BspQI GCTCTTC 1 cut(s) 2071
BspT104I TTCGAA 1 cut(s) 626
BspT107I GGYRCC 1 cut(s) 1156
BspTNI GGTCTC 2 cut(s) 2773, 2825
BsrBI CCGCTC 1 cut(s) 1589
BsrDI GCAATG 2 cut(s) 235, 1944
BsrGI TGTACA 1 cut(s) 727
BssECI CCNNGG 8 cut(s) 131, 631, 793, 914, 1378, 1959, 2020, 2922
BssMI GATC 6 cut(s) 479, 2029, 2218, 2305, 2695, 2980
BssNI GRCGYC 1 cut(s) 275
BssT1I CCWWGG 3 cut(s) 131, 914, 2922
Bst2UI CCWGG 8 cut(s) 477, 632, 795, 855, 960, 1154, 1380, 2177
Bst6I CTCTTC 4 cut(s) 337, 1603, 2071, 2948
BstACI GRCGYC 1 cut(s) 275
BstAPI GCANNNNNTGC 2 cut(s) 1304, 1874
BstAUI TGTACA 1 cut(s) 727
BstBAI YACGTR 1 cut(s) 3014
BstBI TTCGAA 1 cut(s) 626
BstC8I GCNNGC 8 cut(s) 219, 876, 894, 1020, 1175, 1429, 1680, 2809
BstDSI CCRYGG 1 cut(s) 131
BstEII GGTNACC 1 cut(s) 548
BstHHI GCGC 1 cut(s) 2215
BstKTI GATC 6 cut(s) 482, 2032, 2221, 2308, 2698, 2983
BstMAI GTCTC 6 cut(s) 1061, 1079, 2745, 2773, 2825, 2945
BstMBI GATC 6 cut(s) 479, 2029, 2218, 2305, 2695, 2980
BstNI CCWGG 8 cut(s) 477, 632, 795, 855, 960, 1154, 1380, 2177
BstNSI RCATGY 2 cut(s) 2387, 2603
BstPI GGTNACC 1 cut(s) 548
BstSCI CCNGG 9 cut(s) 475, 630, 793, 853, 958, 1152, 1378, 2175, 2763
BstSFI CTRYAG 2 cut(s) 376, 420
BstSLI GKGCMC 2 cut(s) 130, 793
BstV2I GAAGAC 3 cut(s) 1134, 2142, 2967
BstX2I RGATCY 3 cut(s) 479, 2218, 2695
BstXI CCANNNNNNTGG 2 cut(s) 581, 1939
BstYI RGATCY 3 cut(s) 479, 2218, 2695
Bsu15I ATCGAT 1 cut(s) 61
Bsu36I CCTNAGG 1 cut(s) 1472
BsuI GTATCC 3 cut(s) 265, 1522, 2340
BsuRI GGCC 5 cut(s) 26, 217, 922, 1837, 2013
BsuTUI ATCGAT 1 cut(s) 61
BtgI CCRYGG 1 cut(s) 131
BtrI CACGTC 1 cut(s) 1976
BtsI GCAGTG 3 cut(s) 1362, 1702, 2082
BtsIMutI CAGTG 8 cut(s) 385, 1309, 1362, 1702, 1779, 1939, 2082, 2435
BveI ACCTGC 1 cut(s) 1327
Cac8I GCNNGC 8 cut(s) 219, 876, 894, 1020, 1175, 1429, 1680, 2809
CaiI CAGNNNCTG 4 cut(s) 854, 1874, 2222, 2434
CfoI GCGC 1 cut(s) 2215
Cfr13I GGNCC 2 cut(s) 40, 215
ClaI ATCGAT 1 cut(s) 61
CseI GACGC 1 cut(s) 2972
DpnI GATC 6 cut(s) 481, 2031, 2220, 2307, 2697, 2982
DpnII GATC 6 cut(s) 479, 2029, 2218, 2305, 2695, 2980
DraI TTTAAA 1 cut(s) 2299
DrdI GACNNNNNNGTC 1 cut(s) 1980
DseDI GACNNNNNNGTC 1 cut(s) 1980
Eam1104I CTCTTC 4 cut(s) 337, 1603, 2071, 2948
EarI CTCTTC 4 cut(s) 337, 1603, 2071, 2948
Ecl136II GAGCTC 1 cut(s) 1749
Eco130I CCWWGG 3 cut(s) 131, 914, 2922
Eco24I GRGCYC 2 cut(s) 1619, 1751
Eco31I GGTCTC 2 cut(s) 2773, 2825
Eco47I GGWCC 1 cut(s) 40
Eco53kI GAGCTC 1 cut(s) 1749
Eco57I CTGAAG 1 cut(s) 2635
Eco81I CCTNAGG 1 cut(s) 1472
Eco88I CYCGRG 1 cut(s) 1518
Eco91I GGTNACC 1 cut(s) 548
EcoICRI GAGCTC 1 cut(s) 1749
EcoO65I GGTNACC 1 cut(s) 548
EcoRII CCWGG 8 cut(s) 475, 630, 793, 853, 958, 1152, 1378, 2175
EcoT14I CCWWGG 3 cut(s) 131, 914, 2922
EcoT22I ATGCAT 1 cut(s) 1002
EcoT38I GRGCYC 2 cut(s) 1619, 1751
ErhI CCWWGG 3 cut(s) 131, 914, 2922
FaqI GGGAC 2 cut(s) 505, 767
FauI CCCGC 1 cut(s) 1436
FauNDI CATATG 1 cut(s) 1324
FbaI TGATCA 1 cut(s) 2305
FblI GTMKAC 2 cut(s) 812, 2503
FriOI GRGCYC 2 cut(s) 1619, 1751
FspBI CTAG 7 cut(s) 399, 864, 1242, 1896, 2073, 2388, 2990
GlaI GCGC 1 cut(s) 2214
GsaI CCCAGC 1 cut(s) 492
GsuI CTGGAG 3 cut(s) 564, 1085, 2504
HaeIII GGCC 5 cut(s) 26, 217, 922, 1837, 2013
HapII CCGG 3 cut(s) 279, 923, 2765
HgaI GACGC 1 cut(s) 2972
HhaI GCGC 1 cut(s) 2215
Hin1I GRCGYC 1 cut(s) 275
Hin6I GCGC 1 cut(s) 2213
HinP1I GCGC 1 cut(s) 2213
HpaII CCGG 3 cut(s) 279, 923, 2765
HphI GGTGA 2 cut(s) 1142, 1715
Hpy166II GTNNAC 2 cut(s) 813, 2504
Hpy8I GTNNAC 2 cut(s) 813, 2504
Hpy99I CGWCG 2 cut(s) 277, 1977
HpyAV CCTTC 8 cut(s) 268, 957, 1396, 1652, 2456, 2465, 2575, 2807
HpyCH4IV ACGT 4 cut(s) 275, 1975, 2191, 3013
HpySE526I ACGT 4 cut(s) 275, 1975, 2191, 3013
Hsp92I GRCGYC 1 cut(s) 275
HspAI GCGC 1 cut(s) 2213
Kpn2I TCCGGA 1 cut(s) 278
Ksp22I TGATCA 1 cut(s) 2305
Kzo9I GATC 6 cut(s) 479, 2029, 2218, 2305, 2695, 2980
LguI GCTCTTC 1 cut(s) 2071
LmnI GCTCC 3 cut(s) 451, 1589, 1645
LweI GCATC 8 cut(s) 673, 987, 1009, 1762, 1901, 2140, 2465, 2703
MaeI CTAG 7 cut(s) 399, 864, 1242, 1896, 2073, 2388, 2990
MaeII ACGT 4 cut(s) 275, 1975, 2191, 3013
MalI GATC 6 cut(s) 481, 2031, 2220, 2307, 2697, 2982
MbiI CCGCTC 1 cut(s) 1589
MboI GATC 6 cut(s) 479, 2029, 2218, 2305, 2695, 2980
MflI RGATCY 3 cut(s) 479, 2218, 2695
MhlI GDGCHC 5 cut(s) 130, 448, 793, 1619, 1751
MlyI GAGTC 8 cut(s) 487, 610, 926, 1066, 1081, 1586, 2649, 2947
MmeI TCCRAC 3 cut(s) 934, 1256, 2038
Mph1103I ATGCAT 1 cut(s) 1002
MroI TCCGGA 1 cut(s) 278
MroXI GAANNNNTTC 2 cut(s) 1249, 2004
MseI TTAA 5 cut(s) 1704, 2163, 2298, 2360, 2444
MslI CAYNNNNRTG 4 cut(s) 1367, 1562, 1728, 3016
MspA1I CMGCKG 4 cut(s) 968, 1431, 1834, 2621
MspI CCGG 3 cut(s) 279, 923, 2765
MspR9I CCNGG 9 cut(s) 477, 632, 795, 855, 960, 1154, 1380, 2177, 2765
Mva1269I GAATGC 3 cut(s) 142, 2053, 2068
MvaI CCWGG 8 cut(s) 477, 632, 795, 855, 960, 1154, 1380, 2177
NciI CCSGG 1 cut(s) 2765
NcoI CCATGG 1 cut(s) 131
NdeI CATATG 1 cut(s) 1324
NdeII GATC 6 cut(s) 479, 2029, 2218, 2305, 2695, 2980
NlaIV GGNNCC 4 cut(s) 42, 1158, 1384, 1647
NmeAIII GCCGAG 2 cut(s) 1984, 2045
NmuCI GTSAC 5 cut(s) 1549, 1564, 1904, 2436, 2623
NsiI ATGCAT 1 cut(s) 1002
NspI RCATGY 2 cut(s) 2387, 2603
NspV TTCGAA 1 cut(s) 626
OliI CACNNNNGTG 1 cut(s) 1562
PaeR7I CTCGAG 1 cut(s) 1518
PaqCI CACCTGC 1 cut(s) 1327
PciSI GCTCTTC 1 cut(s) 2071
PcsI WCGNNNNNNNCGW 4 cut(s) 1981, 1990, 2197, 2749
PctI GAATGC 3 cut(s) 142, 2053, 2068
PdmI GAANNNNTTC 2 cut(s) 1249, 2004
PfeI GAWTC 8 cut(s) 4, 58, 472, 1202, 1228, 1454, 1720, 2276
PflMI CCANNNNNTGG 2 cut(s) 854, 2788
PfoI TCCNGGA 1 cut(s) 475
PleI GAGTC 8 cut(s) 487, 610, 926, 1065, 1081, 1585, 2649, 2946
PpsI GAGTC 8 cut(s) 487, 610, 926, 1065, 1081, 1585, 2649, 2946
Ppu21I YACGTR 1 cut(s) 3014
Psp124BI GAGCTC 1 cut(s) 1751
Psp1406I AACGTT 1 cut(s) 2191
Psp6I CCWGG 8 cut(s) 475, 630, 793, 853, 958, 1152, 1378, 2175
PspEI GGTNACC 1 cut(s) 548
PspFI CCCAGC 1 cut(s) 488
PspGI CCWGG 8 cut(s) 475, 630, 793, 853, 958, 1152, 1378, 2175
PspN4I GGNNCC 4 cut(s) 42, 1158, 1384, 1647
PspPI GGNCC 2 cut(s) 40, 215
PstNI CAGNNNCTG 4 cut(s) 854, 1874, 2222, 2434
PsuI RGATCY 3 cut(s) 479, 2218, 2695
PvuII CAGCTG 2 cut(s) 968, 2621
RseI CAYNNNNRTG 4 cut(s) 1367, 1562, 1728, 3016
SacI GAGCTC 1 cut(s) 1751
SapI GCTCTTC 1 cut(s) 2071
SaqAI TTAA 5 cut(s) 1704, 2163, 2298, 2360, 2444
Sau3AI GATC 6 cut(s) 479, 2029, 2218, 2305, 2695, 2980
Sau96I GGNCC 2 cut(s) 40, 215
SchI GAGTC 8 cut(s) 487, 610, 926, 1066, 1081, 1586, 2649, 2947
ScrFI CCNGG 9 cut(s) 477, 632, 795, 855, 960, 1154, 1380, 2177, 2765
SduI GDGCHC 5 cut(s) 130, 448, 793, 1619, 1751
SfaNI GCATC 8 cut(s) 673, 987, 1009, 1762, 1901, 2140, 2465, 2703
SfcI CTRYAG 2 cut(s) 376, 420
Sfr274I CTCGAG 1 cut(s) 1518
SfuI TTCGAA 1 cut(s) 626
SinI GGWCC 1 cut(s) 40
SlaI CTCGAG 1 cut(s) 1518
SmiMI CAYNNNNRTG 4 cut(s) 1367, 1562, 1728, 3016
SmlI CTYRAG 3 cut(s) 1122, 1518, 2089
SmoI CTYRAG 3 cut(s) 1122, 1518, 2089
SpeI ACTAGT 1 cut(s) 863
SsiI CCGC 4 cut(s) 1429, 1587, 1834, 2459
SspI AATATT 2 cut(s) 95, 764
SspMI CTAG 7 cut(s) 399, 864, 1242, 1896, 2073, 2388, 2990
SstI GAGCTC 1 cut(s) 1751
StyD4I CCNGG 9 cut(s) 475, 630, 793, 853, 958, 1152, 1378, 2175, 2763
StyI CCWWGG 3 cut(s) 131, 914, 2922
TaiI ACGT 4 cut(s) 278, 1978, 2194, 3016
TaqI TCGA 5 cut(s) 61, 272, 626, 1519, 2983
TaqII GACCGA 1 cut(s) 2849
TatI WGTACW 6 cut(s) 596, 727, 974, 1222, 1292, 2338
TauI GCSGC 1 cut(s) 1837
TfiI GAWTC 8 cut(s) 4, 58, 472, 1202, 1228, 1454, 1720, 2276
Tru1I TTAA 5 cut(s) 1704, 2163, 2298, 2360, 2444
Tru9I TTAA 5 cut(s) 1704, 2163, 2298, 2360, 2444
TscAI CASTG 8 cut(s) 385, 1309, 1369, 1702, 1786, 1939, 2089, 2435
TseFI GTSAC 5 cut(s) 1549, 1564, 1904, 2436, 2623
Tsp45I GTSAC 5 cut(s) 1549, 1564, 1904, 2436, 2623
TspGWI ACGGA 5 cut(s) 24, 659, 2189, 2359, 2916
TspRI CASTG 8 cut(s) 385, 1309, 1369, 1702, 1786, 1939, 2089, 2435
Van91I CCANNNNNTGG 2 cut(s) 854, 2788
VpaK11BI GGWCC 1 cut(s) 40
XapI RAATTY 6 cut(s) 184, 1706, 1810, 2004, 2062, 2731
XbaI TCTAGA 2 cut(s) 2072, 2989
XceI RCATGY 2 cut(s) 2387, 2603
XhoI CTCGAG 1 cut(s) 1518
XmiI GTMKAC 2 cut(s) 812, 2503
XmnI GAANNNNTTC 2 cut(s) 1249, 2004
XspI CTAG 7 cut(s) 399, 864, 1242, 1896, 2073, 2388, 2990
ZraI GACGTC 1 cut(s) 276
Zsp2I ATGCAT 1 cut(s) 1002
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.