FvH4_7g20770

Leukocyte receptor cluster

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
fragaria_vesca
Fvb7
OG0009843
Physical Location & Seq
Forward (+)
16819897 .. 16829072
9176 bp
Loading structure...
UTR
Exon/CDS
Intron
FvH4_7g20770.t2

Sequence Viewer

Length: 3072 bp
ATGATGATGAACCAAGGAGGCAATACTCAGACCATTGCTGCTGTCGACCCCAATTCAATTGAGAATCGCCATGTAGCTAATGGGAACCAAGGACAGGCGCCCTCGTATTATCCGTCAACAAGTGTGGCGGAAGCGTCTTATCCGTCAACAAGTGGGGCGGAAGCGTCAGCATGGCCAACTCATCGGGTGGAGAATGGCTCCACAAATAATGGGGTTCATTCGCAAACAACGTATCAATACAATCAGCATACACAGCCGCCTGGGAGTAGTACGCCCAGTTTGGGAACAGTGAATGCACCGCAAGATTACAGTAGCTACGCGTCATACCCTAATCCTGCTGATCCGTATGGTTATGGAAGTACAGGATACCAAGGTTACTATAACAACTATCAGCAGCAACCCAACCAGTCCTACTCACAACCCGTAGGAGCATATCAAAATACAGGTGCTCCTTATCAGCCTATTTCCTCATTTCAGAATACAGGGTCTTATGCTGGGTCTGCAAGTTATTCAAGCACTTACTACAATCCTGCTGATTATCAGACTGCTGGAGGCTATGCAAGTAGCGGTTACACTAATCAAACTAATCAGACCACCGCTTGGAATGGTGGAAATTATGCAAACTATACCTCTCAACAGTATGCACCTTACACTCCAGAAGCTCCTGGTGTATATAGTTCTGCTCCTACAACGTCAACTCCACAAAATTATCAGCAGCAATATAACCAATGGGCAGATTATTACAATCAAACAGAAGTCAGTTGTGCTCCTGGGACTGAGAACTTGTCTGTTACTAGTACACAGAATGTGGGATGTCCGGTTCCAGGTGTTACCACTGGGTATCAAACCTCAGTCAACCAGCCACCACCACCACCACCTTCATACACTCCTTCATGGAGGCCAGAATCTAGTTCATCTCACTTACCATCGGTGCAGTCTGGTGCTGTAGTTGGTGGTGCTCATGATGCTTACTGGAATCATGTGGCTCCTACTTCGCAATCTCAAATTCAACATATATCTCCTAATCAAGCACAATTTCAAAAGCCTTTGGATCAAAAAAATTCTTATGATAGCTTTCAGGACCAACAGAAAGCTACAACTTCTCAATCATCAAGCATTCAGTATCCTCCTGCTTCTCAGCCACCGTATGTGTCTCATAGTTACCAAACACCTTCACAAGCTGTTCCATCAATAGATGCACAAAGAGCAAACAAACTGCAGATTCCAACAAACCCTAGAATCACTTCAAGTATAACTGTGGGTTTACGAAAAACTGAAAAGGATATAAATATGACCAGTCCAGCAGTGAAACCTGCTTACATCAGTGTTTCACTGCCAAAACCGGTCGATAAGGTGCCATCCAGTGCTAGTGCTGATTCTCTACTGAAGACTGGTATGTTCCCCAAGTCACTGCGTGGTTACGTTGAAAGAGCTTTGGCTCGTTGTAAAGATGATAATCAGATGGCTGCCTGTCAGGTTGTCATGAAGGAGATCATCACCAAGGCAACAGCTGATAGCACTCTTTACACACGAGACTGGGATACTGAGCCTCTTTTTCCCCTCCCAAATGAAGATGCTACAAATAAAGAGTTAAATTCTTCAGACCTTGTTTCATCATTGGCAAAGCTTAAAAGAAGTCCAAGTAGACGGCCCAAGAGTAGATGGGAACCTTTACCAGAGGAGAAGTCAGAGAAGTCCGCTGAGAGGCCAGCCTCTTTAAATGGCAGTGGTCTAAACTATGCTGCTTGGGGACATGTGAATGATAAGGAGAGAAAGCCATTTGTGTGGGGTTCTGGGAGTAAGAATGATAATATGAGTAATGCAAAGTTTCCCTCGCTGGAGCAGAAAAGTGCAAGTAAGATAATACAAAAGCCATTTAAGAGGCAACGCCTTTCTGATGGGGTAGGCACTACTGAGAATGGTGATGCATCTAGTGATAGTGATCCTGATCAAGGATTAGCAGCCTACTACACGGGTGCAATGGCCCTTGCAGATTCACCAGAAGAAAGAAAGAGACGTGAACATCGATCTAAGCGTTTCGAAAAAGTGCAAAGCCATCGAGGACAGAATAATCATTTCAAACCTAAAAATGCTGGTGCTGGAAACTTGTATGCTAGAAGAGCTAATGCCTTGGTGCTCAGCAAAAATTTTGAAGATGGTGCTAGCAGGGCTGTTGAAGACATTGACTGGGATTCTCTTACTGTCAAGGGGACTTGCCAAGAAATTGAGAAACGTTATTTGCGCCTCACTTCTGCACCTGATCCTGCCACTGTTAGGCCGGAGGATGTTCTTGAAAAAGCTTTGCTTATGGTACAAAATTCCCAGAAGAATTACCTATATAAATGTGATCAACTGAAGTCCATTCGCCAGGATTTGACAGTGCAACGAATTCGAAATCATTTAACAGTAAAGGTGTATGAAACTCATGCTCGGTTAGCATTGGAAGTTGGAGACCTGCCAGAATATAATCAGTGCCAGTCACAGTTGAAATCACTCTATGCTGACGGTATTGAGGGATGTCATATGGAGTTTTCTGCGTACAACTTGCTTTGTGTTATCCTTCACTCAAATAATAACAGAGATCTCTTATCATCAATGGCAAGTTTGTCAGCTGAAACAAAAAGGCACGAGGCTGTCAAACATGCTCTTGCAGTTCGAGCTGCTGTCACTTCGGGAAATTATGTCATGTTCTTCAGGCTCTATAAGACAGCTCCCAACTTAAGCACCTGCCTTATGGATCTTTATGTTGAAAAGATGCGGTTTAAGGCAGTGAGTTGCATGTGCCGATCATATCGGCCGACAATACCTGTTTCATATGTTGCTCAAATTCTGGGGTTTACCAACATAACACCTACAAATGAGGAAAGTGAGGATAAGGATTCAGAAGGATTGGAGGAATGCATTGAATGGTTGAAACTGCATGGTGCATCCTTTATTGCAGATAACAATGGGGAAATGCAGCTTGACGCGAAGTCTACTTCTTCTAGTCTTTACATGCCAGAGACTGATGCCGTGTCCCATGGAGATGCCAATCTTGCTGTTAATGATTTTTTTACACGGACACCTTCATAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044424 GO:0044464
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
SAC3_GANP

Protein Analysis

1024

Amino Acids

112.5

Weight (kDa)

6.62

Isoelectric Point (pI)

47.47

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
SAC3_GANP PF03399 747 - 953 3.4e-25 SAC3/GANP family
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 1 cut(s) 2735
Acc36I ACCTGC 3 cut(s) 1321, 2463, 2735
AccB1I GGYRCC 2 cut(s) 97, 1354
AccB7I CCANNNNNTGG 1 cut(s) 600
AccI GTMKAC 3 cut(s) 45, 1645, 2975
AccII CGCG 2 cut(s) 320, 2969
AciI CCGC 8 cut(s) 128, 158, 257, 299, 567, 597, 1698, 2758
AclI AACGTT 1 cut(s) 2233
AclWI GGATC 5 cut(s) 335, 1059, 1937, 2255, 2745
AcoI YGGCCR 2 cut(s) 173, 2795
AcsI RAATTY 7 cut(s) 1005, 1060, 1594, 2146, 2317, 2388, 2826
AcuI CTGAAG 4 cut(s) 1406, 1584, 2375, 2677
AcyI GRCGYC 1 cut(s) 98
AdeI CACNNNGTG 1 cut(s) 1415
AfaI GTAC 5 cut(s) 271, 361, 799, 2313, 2540
AfiI CCNNNNNNNGG 7 cut(s) 94, 281, 600, 824, 1704, 1952, 2274
AflII CTTAAG 1 cut(s) 2719
AflIII ACRYGT 2 cut(s) 318, 1753
AgeI ACCGGT 1 cut(s) 1342
AhdI GACNNNNNGTC 1 cut(s) 2971
AhlI ACTAGT 1 cut(s) 794
AjiI CACGTC 1 cut(s) 2018
AjnI CCWGG 5 cut(s) 259, 664, 769, 823, 2367
AloI GAACNNNNNNTCC 2 cut(s) 804, 836
Alw21I GWGCWC 4 cut(s) 451, 769, 961, 2139
Alw26I GTCTC 5 cut(s) 1158, 1527, 2008, 2445, 2996
AlwI GGATC 5 cut(s) 335, 1059, 1937, 2255, 2745
AlwNI CAGNNNCTG 1 cut(s) 3005
AoxI GGCC 7 cut(s) 173, 899, 1649, 1706, 1983, 2276, 2795
ApeKI GCWGC 8 cut(s) 38, 394, 715, 1466, 1742, 1961, 2660, 2959
ApoI RAATTY 7 cut(s) 1005, 1060, 1594, 2146, 2317, 2388, 2826
AsiGI ACCGGT 1 cut(s) 1342
Asp700I GAANNNNTTC 1 cut(s) 1243
AspLEI GCGC 2 cut(s) 100, 2244
AspS9I GGNCC 3 cut(s) 1081, 1650, 1984
AsuHPI GGTGA 3 cut(s) 1489, 1934, 1989
AsuII TTCGAA 2 cut(s) 2040, 2392
AsuNHI GCTAGC 1 cut(s) 2162
AvaII GGWCC 1 cut(s) 1081
BaeI ACNNNNGTAYC 2 cut(s) 358, 391
BalI TGGCCA 1 cut(s) 175
BanI GGYRCC 2 cut(s) 97, 1354
BauI CACGAG 2 cut(s) 1530, 2627
BbsI GAAGAC 2 cut(s) 1394, 2184
Bbv12I GWGCWC 4 cut(s) 451, 769, 961, 2139
BbvI GCAGC 8 cut(s) 25, 406, 727, 1453, 1729, 1973, 2647, 2971
BccI CCATC 8 cut(s) 934, 1195, 1366, 1456, 1656, 1892, 2064, 2150
BceAI ACGGC 2 cut(s) 1664, 2996
BcgI CGANNNNNNTGC 4 cut(s) 2039, 2073, 2372, 2406
BciT130I CCWGG 5 cut(s) 261, 666, 771, 825, 2369
BciVI GTATCC 3 cut(s) 359, 1134, 1534
BclI TGATCA 2 cut(s) 1948, 2347
BcoDI GTCTC 5 cut(s) 1158, 1527, 2008, 2445, 2996
BcuI ACTAGT 1 cut(s) 794
BfaI CTAG 8 cut(s) 795, 909, 1236, 1368, 1932, 2115, 2163, 2985
BfmI CTRYAG 2 cut(s) 945, 1217
BfoI RGCGCY 1 cut(s) 101
BfrI CTTAAG 1 cut(s) 2719
BfuAI ACCTGC 3 cut(s) 1321, 2463, 2735
BfuI GTATCC 3 cut(s) 359, 1134, 1534
BglII AGATCT 1 cut(s) 2581
BisI GCNGC 9 cut(s) 39, 257, 395, 716, 1467, 1743, 1962, 2661, 2960
BlpI GCTNAGC 1 cut(s) 2138
BlsI GCNGC 9 cut(s) 40, 258, 396, 717, 1468, 1744, 1963, 2662, 2961
Bme1390I CCNGG 5 cut(s) 261, 666, 771, 825, 2369
Bme18I GGWCC 1 cut(s) 1081
BmeRI GACNNNNNGTC 1 cut(s) 2971
BmgBI CACGTC 1 cut(s) 2018
BmgT120I GGNCC 3 cut(s) 1081, 1650, 1984
BmiI GGNNCC 7 cut(s) 86, 99, 199, 822, 987, 1356, 1668
BmrFI CCNGG 5 cut(s) 261, 666, 771, 825, 2369
BmrI ACTGGG 4 cut(s) 270, 846, 1546, 2197
BmsI GCATC 9 cut(s) 955, 1186, 1564, 1915, 1937, 2745, 2936, 2998, 3016
BmtI GCTAGC 1 cut(s) 2166
BmuI ACTGGG 4 cut(s) 270, 846, 1546, 2197
BpiI GAAGAC 2 cut(s) 1394, 2184
BplI GAGNNNNNCTC 2 cut(s) 182, 214
BpmI CTGGAG 3 cut(s) 570, 639, 1859
Bpu1102I GCTNAGC 1 cut(s) 2138
Bpu14I TTCGAA 2 cut(s) 2040, 2392
Bsa29I ATCGAT 1 cut(s) 2026
BsaBI GATNNNNATC 4 cut(s) 1455, 1941, 1947, 3030
BsaHI GRCGYC 1 cut(s) 98
BsaI GGTCTC 1 cut(s) 2445
BsaJI CCNNGG 8 cut(s) 13, 88, 260, 370, 770, 1500, 2130, 3019
BsaWI WCCGGW 2 cut(s) 817, 1342
BsaXI ACNNNNNCTCC 4 cut(s) 433, 463, 682, 712
Bsc4I CCNNNNNNNGG 7 cut(s) 94, 281, 600, 824, 1704, 1952, 2274
Bse118I RCCGGY 1 cut(s) 1342
Bse3DI GCAATG 2 cut(s) 33, 1986
Bse8I GATNNNNATC 4 cut(s) 1455, 1941, 1947, 3030
BseBI CCWGG 5 cut(s) 261, 666, 771, 825, 2369
BseCI ATCGAT 1 cut(s) 2026
BseDI CCNNGG 8 cut(s) 13, 88, 260, 370, 770, 1500, 2130, 3019
BseGI GGATG 5 cut(s) 818, 1358, 2290, 2522, 2927
BseJI GATNNNNATC 4 cut(s) 1455, 1941, 1947, 3030
BseLI CCNNNNNNNGG 7 cut(s) 94, 281, 600, 824, 1704, 1952, 2274
BseMI GCAATG 2 cut(s) 33, 1986
BseMII CTCAG 8 cut(s) 41, 768, 864, 1151, 1536, 1692, 1905, 2152
BseRI GAGGAG 1 cut(s) 1694
BseX3I CGGCCG 1 cut(s) 2795
BseXI GCAGC 8 cut(s) 25, 406, 727, 1453, 1729, 1973, 2647, 2971
BseYI CCCAGC 1 cut(s) 494
BsgI GTGCAG 2 cut(s) 953, 2238
Bsh1236I CGCG 2 cut(s) 320, 2969
Bsh1285I CGRYCG 2 cut(s) 1347, 2798
BshFI GGCC 7 cut(s) 175, 901, 1651, 1708, 1985, 2278, 2797
BshNI GGYRCC 2 cut(s) 97, 1354
BshTI ACCGGT 1 cut(s) 1342
BshVI ATCGAT 1 cut(s) 2026
BsiEI CGRYCG 2 cut(s) 1347, 2798
BsiHKAI GWGCWC 4 cut(s) 451, 769, 961, 2139
BsiSI CCGG 3 cut(s) 818, 1343, 2279
BslFI GGGAC 4 cut(s) 787, 1764, 2224, 3001
BslI CCNNNNNNNGG 7 cut(s) 94, 281, 600, 824, 1704, 1952, 2274
BsmAI GTCTC 5 cut(s) 1158, 1527, 2008, 2445, 2996
BsmBI CGTCTC 1 cut(s) 2008
BsmFI GGGAC 4 cut(s) 787, 1764, 2224, 3001
BsmI GAATGC 3 cut(s) 298, 1116, 2903
BsnI GGCC 7 cut(s) 175, 901, 1651, 1708, 1985, 2278, 2797
Bso31I GGTCTC 1 cut(s) 2445
Bsp119I TTCGAA 2 cut(s) 2040, 2392
Bsp1286I GDGCHC 4 cut(s) 451, 769, 961, 2139
Bsp1720I GCTNAGC 1 cut(s) 2138
Bsp19I CCATGG 1 cut(s) 3019
BspACI CCGC 8 cut(s) 128, 158, 257, 299, 567, 597, 1698, 2758
BspANI GGCC 7 cut(s) 175, 901, 1651, 1708, 1985, 2278, 2797
BspCNI CTCAG 8 cut(s) 40, 769, 863, 1150, 1537, 1693, 1906, 2151
BspDI ATCGAT 1 cut(s) 2026
BspFNI CGCG 2 cut(s) 320, 2969
BspHI TCATGA 2 cut(s) 961, 1482
BspLI GGNNCC 7 cut(s) 86, 99, 199, 822, 987, 1356, 1668
BspMAI CTGCAG 1 cut(s) 1221
BspMI ACCTGC 3 cut(s) 1321, 2463, 2735
BspOI GCTAGC 1 cut(s) 2166
BspPI GGATC 5 cut(s) 335, 1059, 1937, 2255, 2745
BspQI GCTCTTC 1 cut(s) 2113
BspT104I TTCGAA 2 cut(s) 2040, 2392
BspT107I GGYRCC 2 cut(s) 97, 1354
BspTI CTTAAG 1 cut(s) 2719
BspTNI GGTCTC 1 cut(s) 2445
BsrDI GCAATG 2 cut(s) 33, 1986
BsrFI RCCGGY 1 cut(s) 1342
BssAI RCCGGY 1 cut(s) 1342
BssECI CCNNGG 8 cut(s) 13, 88, 260, 370, 770, 1500, 2130, 3019
BssNI GRCGYC 1 cut(s) 98
BssSI CACGAG 2 cut(s) 1530, 2627
BssT1I CCWWGG 6 cut(s) 13, 88, 370, 1500, 2130, 3019
Bst2BI CACGAG 2 cut(s) 1530, 2627
Bst2UI CCWGG 5 cut(s) 261, 666, 771, 825, 2369
Bst6I CTCTTC 1 cut(s) 2113
BstACI GRCGYC 1 cut(s) 98
BstAFI CTTAAG 1 cut(s) 2719
BstBI TTCGAA 2 cut(s) 2040, 2392
BstC8I GCNNGC 2 cut(s) 1710, 2164
BstDEI CTNAG 9 cut(s) 27, 777, 850, 1137, 1545, 1701, 1914, 2031, 2138
BstDSI CCRYGG 1 cut(s) 3019
BstENI CCTNNNNNAGG 1 cut(s) 1950
BstF5I GGATG 5 cut(s) 818, 1358, 2290, 2522, 2927
BstFNI CGCG 2 cut(s) 320, 2969
BstH2I RGCGCY 1 cut(s) 101
BstHHI GCGC 2 cut(s) 100, 2244
BstMAI GTCTC 5 cut(s) 1158, 1527, 2008, 2445, 2996
BstMCI CGRYCG 2 cut(s) 1347, 2798
BstMWI GCNNNNNNNGC 9 cut(s) 253, 500, 965, 1205, 2120, 2168, 2435, 2657, 3035
BstNI CCWGG 5 cut(s) 261, 666, 771, 825, 2369
BstNSI RCATGY 4 cut(s) 1757, 2645, 2782, 2998
BstSCI CCNGG 5 cut(s) 259, 664, 769, 823, 2367
BstSFI CTRYAG 2 cut(s) 945, 1217
BstUI CGCG 2 cut(s) 320, 2969
BstV1I GCAGC 8 cut(s) 25, 406, 727, 1453, 1729, 1973, 2647, 2971
BstV2I GAAGAC 2 cut(s) 1394, 2184
BstX2I RGATCY 2 cut(s) 2581, 2737
BstXI CCANNNNNNTGG 1 cut(s) 1785
BstYI RGATCY 2 cut(s) 2581, 2737
BstZI CGGCCG 1 cut(s) 2795
Bsu15I ATCGAT 1 cut(s) 2026
BsuI GTATCC 3 cut(s) 359, 1134, 1534
BsuRI GGCC 7 cut(s) 175, 901, 1651, 1708, 1985, 2278, 2797
BsuTUI ATCGAT 1 cut(s) 2026
BtgI CCRYGG 1 cut(s) 3019
BtrI CACGTC 1 cut(s) 2018
BtsCI GGATG 5 cut(s) 818, 1358, 2290, 2522, 2927
BtsI GCAGTG 5 cut(s) 1311, 1331, 1409, 1732, 2775
BveI ACCTGC 3 cut(s) 1321, 2463, 2735
Cac8I GCNNGC 2 cut(s) 1710, 2164
CaiI CAGNNNCTG 1 cut(s) 3005
CciI TCATGA 2 cut(s) 961, 1482
CfoI GCGC 2 cut(s) 100, 2244
Cfr10I RCCGGY 1 cut(s) 1342
Cfr13I GGNCC 3 cut(s) 1081, 1650, 1984
ClaI ATCGAT 1 cut(s) 2026
CseI GACGC 4 cut(s) 123, 153, 309, 2975
Csp6I GTAC 5 cut(s) 270, 360, 798, 2312, 2539
CspAI ACCGGT 1 cut(s) 1342
CspCI CAANNNNNGTGG 2 cut(s) 105, 140
CviQI GTAC 5 cut(s) 270, 360, 798, 2312, 2539
DdeI CTNAG 9 cut(s) 27, 777, 850, 1137, 1545, 1701, 1914, 2031, 2138
DinI GGCGCC 1 cut(s) 99
DraI TTTAAA 1 cut(s) 1719
DraIII CACNNNGTG 1 cut(s) 1415
DriI GACNNNNNGTC 1 cut(s) 2971
EaeI YGGCCR 2 cut(s) 173, 2795
EagI CGGCCG 1 cut(s) 2795
Eam1104I CTCTTC 1 cut(s) 2113
Eam1105I GACNNNNNGTC 1 cut(s) 2971
EarI CTCTTC 1 cut(s) 2113
EciI GGCGGA 2 cut(s) 143, 173
EclXI CGGCCG 1 cut(s) 2795
Eco130I CCWWGG 6 cut(s) 13, 88, 370, 1500, 2130, 3019
Eco31I GGTCTC 1 cut(s) 2445
Eco47I GGWCC 1 cut(s) 1081
Eco52I CGGCCG 1 cut(s) 2795
Eco57I CTGAAG 4 cut(s) 1406, 1584, 2375, 2677
EcoNI CCTNNNNNAGG 1 cut(s) 1950
EcoRI GAATTC 1 cut(s) 2388
EcoRII CCWGG 5 cut(s) 259, 664, 769, 823, 2367
EcoT14I CCWWGG 6 cut(s) 13, 88, 370, 1500, 2130, 3019
EcoT22I ATGCAT 2 cut(s) 1930, 2903
EgeI GGCGCC 1 cut(s) 99
EheI GGCGCC 1 cut(s) 99
ErhI CCWWGG 6 cut(s) 13, 88, 370, 1500, 2130, 3019
Esp3I CGTCTC 1 cut(s) 2008
FalI AAGNNNNNCTT 2 cut(s) 2289, 2321
FaqI GGGAC 4 cut(s) 787, 1764, 2224, 3001
FauNDI CATATG 2 cut(s) 2523, 2815
FbaI TGATCA 2 cut(s) 1948, 2347
FblI GTMKAC 3 cut(s) 45, 1645, 2975
Fnu4HI GCNGC 9 cut(s) 39, 257, 395, 716, 1467, 1743, 1962, 2661, 2960
FokI GGATG 5 cut(s) 825, 1345, 2297, 2529, 2914
Fsp4HI GCNGC 9 cut(s) 39, 257, 395, 716, 1467, 1743, 1962, 2661, 2960
FspBI CTAG 8 cut(s) 795, 909, 1236, 1368, 1932, 2115, 2163, 2985
GlaI GCGC 2 cut(s) 99, 2243
GluI GCNGC 9 cut(s) 39, 257, 395, 716, 1467, 1743, 1962, 2661, 2960
GsaI CCCAGC 1 cut(s) 498
GsuI CTGGAG 3 cut(s) 570, 639, 1859
HaeII RGCGCY 1 cut(s) 101
HaeIII GGCC 7 cut(s) 175, 901, 1651, 1708, 1985, 2278, 2797
HapII CCGG 3 cut(s) 818, 1343, 2279
HgaI GACGC 4 cut(s) 123, 153, 309, 2975
HhaI GCGC 2 cut(s) 100, 2244
Hin1I GRCGYC 1 cut(s) 98
Hin6I GCGC 2 cut(s) 98, 2242
HinP1I GCGC 2 cut(s) 98, 2242
HincII GTYRAC 5 cut(s) 46, 117, 147, 696, 856
HindII GTYRAC 5 cut(s) 46, 117, 147, 696, 856
HindIII AAGCTT 2 cut(s) 1625, 2298
HinfI GANTC 9 cut(s) 64, 905, 976, 1222, 1239, 1376, 1994, 2192, 2879
HpaII CCGG 3 cut(s) 818, 1343, 2279
HphI GGTGA 3 cut(s) 1489, 1934, 1989
Hpy188I TCNGA 9 cut(s) 30, 477, 543, 591, 1461, 1603, 1690, 1897, 2884
Hpy188III TCNNGA 7 cut(s) 656, 962, 1079, 1483, 1946, 2291, 2673
HpyAV CCTTC 6 cut(s) 888, 900, 1182, 1480, 2570, 2879
HpyCH4IV ACGT 5 cut(s) 230, 692, 1422, 2017, 2233
HpyF10VI GCNNNNNNNGC 9 cut(s) 253, 500, 965, 1205, 2120, 2168, 2435, 2657, 3035
HpyF3I CTNAG 9 cut(s) 27, 777, 850, 1137, 1545, 1701, 1914, 2031, 2138
HpySE526I ACGT 5 cut(s) 230, 692, 1422, 2017, 2233
Hsp92I GRCGYC 1 cut(s) 98
HspAI GCGC 2 cut(s) 98, 2242
KasI GGCGCC 1 cut(s) 97
Ksp22I TGATCA 2 cut(s) 1948, 2347
LguI GCTCTTC 1 cut(s) 2113
LmnI GCTCC 9 cut(s) 203, 428, 454, 667, 688, 772, 991, 1840, 2716
Lsp1109I GCAGC 8 cut(s) 25, 406, 727, 1453, 1729, 1973, 2647, 2971
LweI GCATC 9 cut(s) 955, 1186, 1564, 1915, 1937, 2745, 2936, 2998, 3016
MaeI CTAG 8 cut(s) 795, 909, 1236, 1368, 1932, 2115, 2163, 2985
MaeII ACGT 5 cut(s) 230, 692, 1422, 2017, 2233
MaeIII GTNAC 9 cut(s) 374, 569, 790, 829, 1160, 1407, 1418, 2478, 2665
MfeI CAATTG 1 cut(s) 57
MflI RGATCY 2 cut(s) 2581, 2737
MhlI GDGCHC 4 cut(s) 451, 769, 961, 2139
MlsI TGGCCA 1 cut(s) 175
MluI ACGCGT 1 cut(s) 318
MluNI TGGCCA 1 cut(s) 175
Mly113I GGCGCC 1 cut(s) 98
MmeI TCCRAC 2 cut(s) 1250, 2428
Mox20I TGGCCA 1 cut(s) 175
Mph1103I ATGCAT 2 cut(s) 1930, 2903
MroXI GAANNNNTTC 1 cut(s) 1243
MscI TGGCCA 1 cut(s) 175
MseI TTAA 8 cut(s) 1592, 1629, 1718, 1878, 2402, 2720, 2763, 3042
MslI CAYNNNNRTG 3 cut(s) 1758, 1783, 3024
Msp20I TGGCCA 1 cut(s) 175
MspA1I CMGCKG 3 cut(s) 1511, 1700, 2612
MspCI CTTAAG 1 cut(s) 2719
MspI CCGG 3 cut(s) 818, 1343, 2279
MspR9I CCNGG 5 cut(s) 261, 666, 771, 825, 2369
MunI CAATTG 1 cut(s) 57
Mva1269I GAATGC 3 cut(s) 298, 1116, 2903
MvaI CCWGG 5 cut(s) 261, 666, 771, 825, 2369
MvnI CGCG 2 cut(s) 320, 2969
MwoI GCNNNNNNNGC 9 cut(s) 253, 500, 965, 1205, 2120, 2168, 2435, 2657, 3035
NarI GGCGCC 1 cut(s) 98
NcoI CCATGG 1 cut(s) 3019
NdeI CATATG 2 cut(s) 2523, 2815
NheI GCTAGC 1 cut(s) 2162
NlaIV GGNNCC 7 cut(s) 86, 99, 199, 822, 987, 1356, 1668
NmuCI GTSAC 3 cut(s) 1407, 2478, 2665
NsiI ATGCAT 2 cut(s) 1930, 2903
NspI RCATGY 4 cut(s) 1757, 2645, 2782, 2998
NspV TTCGAA 2 cut(s) 2040, 2392
PagI TCATGA 2 cut(s) 961, 1482
PaqCI CACCTGC 1 cut(s) 2735
PciI ACATGT 1 cut(s) 1753
PciSI GCTCTTC 1 cut(s) 2113
PcsI WCGNNNNNNNCGW 4 cut(s) 110, 227, 2023, 2032
PctI GAATGC 3 cut(s) 298, 1116, 2903
PdmI GAANNNNTTC 1 cut(s) 1243
PfeI GAWTC 9 cut(s) 64, 905, 976, 1222, 1239, 1376, 1994, 2192, 2879
PflMI CCANNNNNTGG 1 cut(s) 600
PinAI ACCGGT 1 cut(s) 1342
PkrI GCNGC 9 cut(s) 40, 258, 396, 717, 1468, 1744, 1963, 2662, 2961
PluTI GGCGCC 1 cut(s) 101
PscI ACATGT 1 cut(s) 1753
Psp1406I AACGTT 1 cut(s) 2233
Psp6I CCWGG 5 cut(s) 259, 664, 769, 823, 2367
PspFI CCCAGC 1 cut(s) 494
PspGI CCWGG 5 cut(s) 259, 664, 769, 823, 2367
PspN4I GGNNCC 7 cut(s) 86, 99, 199, 822, 987, 1356, 1668
PspPI GGNCC 3 cut(s) 1081, 1650, 1984
PstI CTGCAG 1 cut(s) 1221
PstNI CAGNNNCTG 1 cut(s) 3005
PsuI RGATCY 2 cut(s) 2581, 2737
PvuII CAGCTG 2 cut(s) 1511, 2612
RsaI GTAC 5 cut(s) 271, 361, 799, 2313, 2540
RsaNI GTAC 5 cut(s) 270, 360, 798, 2312, 2539
RseI CAYNNNNRTG 3 cut(s) 1758, 1783, 3024
SalI GTCGAC 1 cut(s) 44
SapI GCTCTTC 1 cut(s) 2113
SaqAI TTAA 8 cut(s) 1592, 1629, 1718, 1878, 2402, 2720, 2763, 3042
SatI GCNGC 9 cut(s) 39, 257, 395, 716, 1467, 1743, 1962, 2661, 2960
Sau96I GGNCC 3 cut(s) 1081, 1650, 1984
ScrFI CCNGG 5 cut(s) 261, 666, 771, 825, 2369
SduI GDGCHC 4 cut(s) 451, 769, 961, 2139
SfaNI GCATC 9 cut(s) 955, 1186, 1564, 1915, 1937, 2745, 2936, 2998, 3016
SfcI CTRYAG 2 cut(s) 945, 1217
SfoI GGCGCC 1 cut(s) 99
SfuI TTCGAA 2 cut(s) 2040, 2392
SinI GGWCC 1 cut(s) 1081
SmiMI CAYNNNNRTG 3 cut(s) 1758, 1783, 3024
SmlI CTYRAG 1 cut(s) 2719
SmoI CTYRAG 1 cut(s) 2719
SpeI ACTAGT 1 cut(s) 794
SsiI CCGC 8 cut(s) 128, 158, 257, 299, 567, 597, 1698, 2758
SspDI GGCGCC 1 cut(s) 97
SspMI CTAG 8 cut(s) 795, 909, 1236, 1368, 1932, 2115, 2163, 2985
StyD4I CCNGG 5 cut(s) 259, 664, 769, 823, 2367
StyI CCWWGG 6 cut(s) 13, 88, 370, 1500, 2130, 3019
TaiI ACGT 5 cut(s) 233, 695, 1425, 2020, 2236
TaqI TCGA 7 cut(s) 45, 1347, 2026, 2040, 2059, 2392, 2656
TatI WGTACW 2 cut(s) 359, 797
TauI GCSGC 1 cut(s) 259
TfiI GAWTC 9 cut(s) 64, 905, 976, 1222, 1239, 1376, 1994, 2192, 2879
Tru1I TTAA 8 cut(s) 1592, 1629, 1718, 1878, 2402, 2720, 2763, 3042
Tru9I TTAA 8 cut(s) 1592, 1629, 1718, 1878, 2402, 2720, 2763, 3042
TseFI GTSAC 3 cut(s) 1407, 2478, 2665
TseI GCWGC 8 cut(s) 38, 394, 715, 1466, 1742, 1961, 2660, 2959
Tsp45I GTSAC 3 cut(s) 1407, 2478, 2665
TspGWI ACGGA 3 cut(s) 102, 132, 333
Van91I CCANNNNNTGG 1 cut(s) 600
Vha464I CTTAAG 1 cut(s) 2719
VpaK11BI GGWCC 1 cut(s) 1081
XagI CCTNNNNNAGG 1 cut(s) 1950
XapI RAATTY 7 cut(s) 1005, 1060, 1594, 2146, 2317, 2388, 2826
XceI RCATGY 4 cut(s) 1757, 2645, 2782, 2998
XcmI CCANNNNNNNNNTGG 1 cut(s) 77
XmiI GTMKAC 3 cut(s) 45, 1645, 2975
XmnI GAANNNNTTC 1 cut(s) 1243
XspI CTAG 8 cut(s) 795, 909, 1236, 1368, 1932, 2115, 2163, 2985
Zsp2I ATGCAT 2 cut(s) 1930, 2903
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.