AT2G43490

RAB GTPase activator

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
arabidopsis_thaliana
2
OG0002463
Physical Location & Seq
Reverse (-)
18054392 .. 18058924
4533 bp
Loading structure...
UTR
Exon/CDS
Intron
AT2G43490.3

Sequence Viewer

Length: 2238 bp
ATGTGTTCTGGTGGAGAAGGAAAACAATGGAGCTGTGGAAAAGCGGGTGTAGTGAGTTTGCAGAAAGTTGGATCTTTGGTTCGAGATTTGAGCGAGCCTTGTCTTTCACAGTCACGGATACAGGTTGTTATAACTATCGGCAAAATGCTTAAGCCAGAGAAGTGGCAAGCGTCTTTTGATAGCGACGGAAGAGTTTCTGGTTTCCAGAAGGCGCTTAAATTAATTATTTTAGGGGGAATCGACCCATCTATTAGAGCTGAAGTTTGGGAATTTCTCCTTGGTTGTTATGCGTTGAGCAGCACCTCTGAGTACCGTAATCAACTCAGGGTAGCTCGAAGGAAGCGATACAATGATTTGCTCAAGCAATGCCAGACGATGCATTCAAGTGTGGGAACTGGTTCACTTGCCTATGTTGTGGGATCTAAAGTTATGGATATGCGGAAATCTTATAGAGATGAGGCAGTAAAGGTTGCTACTACAGATGAAAACAGAGAAGATGCTTTTATAGATAATAATGATAATGCTAATACTGAAAATCATCACAGTGATTGGAGTAATAATGGTACTGATACATCTCATTTACACAGAAGGGGAAGTTCTAGTGAGTCAGTTGATTTAGTAAGTGGAAGAGAAAGTCCGGAGAGCGTAGTATACAACACTTCCTCCTTTGTATCTGCCTCTAGTCCTTATGGCTATGCTTCCCCTGACGGTTATTTCGACTTTCCCTCGCTACCGGTTACAGATTTGTTTGGGAGAAATAGTTTAGATAAGATTGAGGTTTCTACGCCAGATGAGGATGCTTCACTGAAAAGTGAATTAAGATCTGAGGATGAGGGAATGCACAATTTTCGAATTGATAAGAATGCTGATTTAATTAGAGAACAACGTAGGTCCACTCCAGAGATCAAAGTGATGCATTCGGATTCTGTTGGACCATCGTCTTATACTGGTCGCAATGCAGAAATAGTTGATGGTCTGAGAATATCAGATGTCCCTGAAATGGCATCAGTAAAGGACACTCCCTCTCGTGTTGGGAATGTCACGGAAGATCGAGTGTCTGAATGGCTTTGGACTTTGCATCGAATAGTTGTTGATGTGGTAAGGACGGATAGCCACCTTGAGTTTTATGAGGATCCAGGAAATCTAGGAAGAATGTCGGATATCCTTGCGGTTTATGCTTGGGTTGATCCTGCAACTGGTTATTGCCAAGGAATGAGTGATTTAGTCTCTCCTTTCGTGGTTCTATTTGAAGATAATGCTGATGCCTTCTGGTGCTTTGAAATGCTCATAAGAAGAACGCGTGCGAATTTCCAAATGGAGGGACCAACTGGGGTGATGGATCAATTGCAATCATTGTGGCACATATTGCAGATTACAGATAAAGATATATTTTCCCACTTATCGCGTATTGGGGCTGAAAGTCTTCATTTTGCCTTCCGGATGCTTTTAGTTCTGTTCCGACGGGAATTGTCTTTTAACGAAGCTCTCAGGATGTGGGAGATGATGTGGGCAGCTGATTATGATGAATCTGTTACTGAAACTTTGGAGAATGATTGCTTGGAGCCTTTGGTGATTCAGCTTCCAAGAAAATCTGAACCTGAGGTGAGTGAAGAAATGATAGAGGATGGAATTGGTAATAGTACAAAGAGGGAACCAATGATTTCAAAGAGCGGGCCAATTTCAAAGAGCAGCGGTTTGTTGTCAAGGAGCGGTTTGCTGCCGAAGAGTGGTCCGTTGCCAAAGACTGCGGGTCCTTTCTCTGATGAGAGTGAGATAAAGTCAGCATCATCCTCGTATCACTTTTGTGGGTTGACAAGAAGTCTTTGGTCAAGGAATGATAGAACAACACATGTCCCTTGTGTCGTTTCATCCATAAAAAAAGGGGATGATGCTCTTCCTGTCTTTTGTGTGGCGGCGATTTTAATCATGAATCGACATAAGATCATGAAAGAAACTCGCTCGATCGATGACATGATACAGATCTTCAATGATAAGGTTCTTGTATTCCGCGTGAGAAGATGCATACGTACAGCCATGAAACTTCGTAGGAAATACATGTACAAGAGTCAGGTAATCAAGACTAAGAGTCACACTCAGTCTCAGAATCTCAACCAGGTTCATATCCAGCATCAAACCCATATGGAGAGCCAGAGGCCGGAGGAGATTCAGAGCCATGGTGAGAACCAGAGCCAAACACCAAGTTTTCATCATAGTCCTGCCACTCAGAATGGTGACTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
RabGAP-TBC

Protein Analysis

745

Amino Acids

83.89

Weight (kDa)

5.92

Isoelectric Point (pI)

52.43

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
RabGAP-TBC PF00566 356 - 505 5e-32 Rab-GTPase-TBC domain
RabGap-TBC_2 PF23436 386 - 504 1.3e-10 RabGAP TBC domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 131
AccBSI CCGCTC 2 cut(s) 1671, 1710
AccI GTMKAC 1 cut(s) 651
AccII CGCG 3 cut(s) 1300, 1405, 2010
AccIII TCCGGA 2 cut(s) 637, 1437
AciI CCGC 9 cut(s) 44, 439, 1169, 1671, 1692, 1710, 1748, 1913, 2008
AclWI GGATC 6 cut(s) 79, 427, 1127, 1140, 1181, 1347
AcsI RAATTY 2 cut(s) 269, 1306
AcuI CTGAAG 1 cut(s) 279
AfaI GTAC 5 cut(s) 311, 565, 1642, 2029, 2060
AfiI CCNNNNNNNGG 5 cut(s) 1000, 1196, 1318, 1727, 2155
AflII CTTAAG 1 cut(s) 149
AflIII ACRYGT 3 cut(s) 1298, 1849, 2055
AgeI ACCGGT 1 cut(s) 733
AgsI TTSAA 6 cut(s) 384, 1250, 1280, 1665, 1683, 1987
AhdI GACNNNNNGTC 3 cut(s) 1749, 1818, 2085
AjnI CCWGG 2 cut(s) 1135, 2112
AjuI GAANNNNNNNTTGG 4 cut(s) 261, 293, 1541, 1573
AleI CACNNNNGTG 1 cut(s) 1803
AloI GAACNNNNNNTCC 2 cut(s) 63, 95
AluBI AGCT 6 cut(s) 33, 257, 332, 1484, 1514, 1579
AluI AGCT 6 cut(s) 33, 257, 332, 1484, 1514, 1579
Alw26I GTCTC 2 cut(s) 1231, 2103
AlwI GGATC 6 cut(s) 79, 427, 1127, 1140, 1181, 1347
Aor13HI TCCGGA 2 cut(s) 637, 1437
AoxI GGCC 2 cut(s) 1673, 2153
ApeKI GCWGC 4 cut(s) 297, 1511, 1689, 1717
ApoI RAATTY 2 cut(s) 269, 1306
ArsI GACNNNNNNTTYG 2 cut(s) 698, 730
AseI ATTAAT 1 cut(s) 221
AsiGI ACCGGT 1 cut(s) 733
Asp700I GAANNNNTTC 3 cut(s) 193, 397, 1422
AspLEI GCGC 1 cut(s) 214
AspS9I GGNCC 6 cut(s) 891, 932, 1322, 1673, 1730, 1751
AsuHPI GGTGA 4 cut(s) 1345, 1582, 1615, 2189
AsuII TTCGAA 1 cut(s) 850
AvaII GGWCC 5 cut(s) 891, 932, 1322, 1730, 1751
AxyI CCTNAGG 1 cut(s) 1599
BamHI GGATCC 1 cut(s) 1132
BauI CACGAG 1 cut(s) 1026
BbsI GAAGAC 1 cut(s) 1415
BbvI GCAGC 4 cut(s) 309, 1523, 1701, 1704
BccI CCATC 5 cut(s) 253, 943, 965, 1330, 1619
BcgI CGANNNNNNTGC 4 cut(s) 830, 864, 1773, 1807
BciT130I CCWGG 2 cut(s) 1137, 2114
BciVI GTATCC 1 cut(s) 111
BcoDI GTCTC 2 cut(s) 1231, 2103
BfaI CTAG 4 cut(s) 600, 681, 1145, 2236
BfmI CTRYAG 1 cut(s) 477
BfoI RGCGCY 1 cut(s) 215
BfrI CTTAAG 1 cut(s) 149
BfuI GTATCC 1 cut(s) 111
BglII AGATCT 2 cut(s) 821, 1980
BisI GCNGC 5 cut(s) 298, 1512, 1690, 1718, 1914
BlsI GCNGC 5 cut(s) 299, 1513, 1691, 1719, 1915
Bme1390I CCNGG 2 cut(s) 1137, 2114
Bme18I GGWCC 5 cut(s) 891, 932, 1322, 1730, 1751
BmeRI GACNNNNNGTC 3 cut(s) 1749, 1818, 2085
BmgT120I GGNCC 6 cut(s) 891, 932, 1322, 1673, 1730, 1751
BmiI GGNNCC 5 cut(s) 1134, 1323, 1563, 1653, 1752
BmrFI CCNGG 2 cut(s) 1137, 2114
BmrI ACTGGG 1 cut(s) 1338
BmuI ACTGGG 1 cut(s) 1338
BoxI GACNNNNGTC 1 cut(s) 937
BpiI GAAGAC 1 cut(s) 1415
BplI GAGNNNNNCTC 2 cut(s) 2077, 2109
BpmI CTGGAG 1 cut(s) 882
Bpu14I TTCGAA 1 cut(s) 850
BpuEI CTTGAG 2 cut(s) 344, 1139
Bsa29I ATCGAT 1 cut(s) 1965
BsaAI YACGTR 1 cut(s) 2027
BsaBI GATNNNNATC 2 cut(s) 1922, 1979
BsaJI CCNNGG 3 cut(s) 277, 1207, 2173
BsaWI WCCGGW 3 cut(s) 637, 733, 1437
BsaXI ACNNNNNCTCC 6 cut(s) 647, 677, 745, 775, 1490, 1520
Bsc4I CCNNNNNNNGG 5 cut(s) 1000, 1196, 1318, 1727, 2155
Bse118I RCCGGY 1 cut(s) 733
Bse1I ACTGG 4 cut(s) 400, 952, 1201, 1333
Bse21I CCTNAGG 1 cut(s) 1599
Bse3DI GCAATG 2 cut(s) 371, 961
Bse8I GATNNNNATC 2 cut(s) 1922, 1979
BseAI TCCGGA 2 cut(s) 637, 1437
BseBI CCWGG 2 cut(s) 1137, 2114
BseCI ATCGAT 1 cut(s) 1965
BseDI CCNNGG 3 cut(s) 277, 1207, 2173
BseGI GGATG 8 cut(s) 802, 835, 1446, 1497, 1630, 1787, 1868, 1891
BseJI GATNNNNATC 2 cut(s) 1922, 1979
BseLI CCNNNNNNNGG 5 cut(s) 1000, 1196, 1318, 1727, 2155
BseMI GCAATG 2 cut(s) 371, 961
BseMII CTCAG 9 cut(s) 297, 337, 816, 968, 1501, 1590, 2108, 2114, 2237
BseNI ACTGG 4 cut(s) 400, 952, 1201, 1333
BseRI GAGGAG 1 cut(s) 2174
BseXI GCAGC 4 cut(s) 309, 1523, 1701, 1704
Bsh1236I CGCG 3 cut(s) 1300, 1405, 2010
Bsh1285I CGRYCG 1 cut(s) 1965
BshFI GGCC 2 cut(s) 1675, 2155
BshTI ACCGGT 1 cut(s) 733
BshVI ATCGAT 1 cut(s) 1965
BsiEI CGRYCG 1 cut(s) 1965
BsiSI CCGG 4 cut(s) 638, 734, 1438, 2156
BslFI GGGAC 3 cut(s) 977, 1335, 1838
BslI CCNNNNNNNGG 5 cut(s) 1000, 1196, 1318, 1727, 2155
BsmAI GTCTC 2 cut(s) 1231, 2103
BsmFI GGGAC 3 cut(s) 977, 1335, 1838
BsmI GAATGC 4 cut(s) 379, 843, 868, 916
BsnI GGCC 2 cut(s) 1675, 2155
Bsp119I TTCGAA 1 cut(s) 850
Bsp13I TCCGGA 2 cut(s) 637, 1437
Bsp1407I TGTACA 1 cut(s) 2058
Bsp19I CCATGG 1 cut(s) 2173
BspACI CCGC 9 cut(s) 44, 439, 1169, 1671, 1692, 1710, 1748, 1913, 2008
BspANI GGCC 2 cut(s) 1675, 2155
BspCNI CTCAG 9 cut(s) 298, 336, 817, 969, 1500, 1591, 2107, 2113, 2236
BspDI ATCGAT 1 cut(s) 1965
BspEI TCCGGA 2 cut(s) 637, 1437
BspFNI CGCG 3 cut(s) 1300, 1405, 2010
BspHI TCATGA 2 cut(s) 1926, 1944
BspLI GGNNCC 5 cut(s) 1134, 1323, 1563, 1653, 1752
BspPI GGATC 6 cut(s) 79, 427, 1127, 1140, 1181, 1347
BspQI GCTCTTC 1 cut(s) 1899
BspT104I TTCGAA 1 cut(s) 850
BspTI CTTAAG 1 cut(s) 149
BsrBI CCGCTC 2 cut(s) 1671, 1710
BsrDI GCAATG 2 cut(s) 371, 961
BsrFI RCCGGY 1 cut(s) 733
BsrGI TGTACA 1 cut(s) 2058
BsrI ACTGG 4 cut(s) 400, 952, 1201, 1333
BssAI RCCGGY 1 cut(s) 733
BssECI CCNNGG 3 cut(s) 277, 1207, 2173
BssNAI GTATAC 1 cut(s) 652
BssSI CACGAG 1 cut(s) 1026
BssT1I CCWWGG 3 cut(s) 277, 1207, 2173
Bst1107I GTATAC 1 cut(s) 652
Bst2BI CACGAG 1 cut(s) 1026
Bst2UI CCWGG 2 cut(s) 1137, 2114
Bst4CI ACNGT 4 cut(s) 111, 314, 545, 710
Bst6I CTCTTC 4 cut(s) 184, 622, 1718, 1899
BstAFI CTTAAG 1 cut(s) 149
BstAPI GCANNNNNTGC 1 cut(s) 1366
BstAUI TGTACA 1 cut(s) 2058
BstBAI YACGTR 1 cut(s) 2027
BstBI TTCGAA 1 cut(s) 850
BstC8I GCNNGC 4 cut(s) 95, 168, 1302, 1673
BstDSI CCRYGG 1 cut(s) 2173
BstF5I GGATG 8 cut(s) 802, 835, 1446, 1497, 1630, 1787, 1868, 1891
BstFNI CGCG 3 cut(s) 1300, 1405, 2010
BstH2I RGCGCY 1 cut(s) 215
BstHHI GCGC 1 cut(s) 214
BstMAI GTCTC 2 cut(s) 1231, 2103
BstMCI CGRYCG 1 cut(s) 1965
BstMWI GCNNNNNNNGC 2 cut(s) 1175, 1366
BstNI CCWGG 2 cut(s) 1137, 2114
BstNSI RCATGY 2 cut(s) 1853, 2059
BstPAI GACNNNNGTC 1 cut(s) 937
BstSCI CCNGG 2 cut(s) 1135, 2112
BstSFI CTRYAG 1 cut(s) 477
BstSNI TACGTA 1 cut(s) 2027
BstUI CGCG 3 cut(s) 1300, 1405, 2010
BstV1I GCAGC 4 cut(s) 309, 1523, 1701, 1704
BstV2I GAAGAC 1 cut(s) 1415
BstX2I RGATCY 5 cut(s) 71, 419, 821, 1132, 1980
BstXI CCANNNNNNTGG 1 cut(s) 162
BstYI RGATCY 5 cut(s) 71, 419, 821, 1132, 1980
BstZ17I GTATAC 1 cut(s) 652
Bsu15I ATCGAT 1 cut(s) 1965
Bsu36I CCTNAGG 1 cut(s) 1599
BsuI GTATCC 1 cut(s) 111
BsuRI GGCC 2 cut(s) 1675, 2155
BsuTUI ATCGAT 1 cut(s) 1965
BtgI CCRYGG 1 cut(s) 2173
BtsCI GGATG 8 cut(s) 802, 835, 1446, 1497, 1630, 1787, 1868, 1891
BtsIMutI CAGTG 2 cut(s) 550, 803
Cac8I GCNNGC 4 cut(s) 95, 168, 1302, 1673
CciI TCATGA 2 cut(s) 1926, 1944
CfoI GCGC 1 cut(s) 214
Cfr10I RCCGGY 1 cut(s) 733
Cfr13I GGNCC 6 cut(s) 891, 932, 1322, 1673, 1730, 1751
ClaI ATCGAT 1 cut(s) 1965
CseI GACGC 1 cut(s) 159
CsiI ACCWGGT 1 cut(s) 2112
Csp6I GTAC 5 cut(s) 310, 564, 1641, 2028, 2059
CspAI ACCGGT 1 cut(s) 733
CspCI CAANNNNNGTGG 2 cut(s) 1337, 1372
CviAII CATG 7 cut(s) 1850, 1927, 1945, 1972, 2035, 2056, 2174
CviQI GTAC 5 cut(s) 310, 564, 1641, 2028, 2059
DriI GACNNNNNGTC 3 cut(s) 1749, 1818, 2085
Eam1104I CTCTTC 4 cut(s) 184, 622, 1718, 1899
Eam1105I GACNNNNNGTC 3 cut(s) 1749, 1818, 2085
EarI CTCTTC 4 cut(s) 184, 622, 1718, 1899
Eco105I TACGTA 1 cut(s) 2027
Eco130I CCWWGG 3 cut(s) 277, 1207, 2173
Eco32I GATATC 1 cut(s) 1162
Eco47I GGWCC 5 cut(s) 891, 932, 1322, 1730, 1751
Eco57I CTGAAG 1 cut(s) 279
Eco81I CCTNAGG 1 cut(s) 1599
EcoO109I RGGNCCY 1 cut(s) 1751
EcoRII CCWGG 2 cut(s) 1135, 2112
EcoRV GATATC 1 cut(s) 1162
EcoT14I CCWWGG 3 cut(s) 277, 1207, 2173
EcoT22I ATGCAT 3 cut(s) 381, 918, 2024
ErhI CCWWGG 3 cut(s) 277, 1207, 2173
FaeI CATG 7 cut(s) 1853, 1930, 1948, 1975, 2038, 2059, 2177
FaqI GGGAC 3 cut(s) 977, 1335, 1838
FatI CATG 7 cut(s) 1849, 1926, 1944, 1971, 2034, 2055, 2173
FauI CCCGC 3 cut(s) 37, 1664, 1741
FauNDI CATATG 1 cut(s) 2139
FblI GTMKAC 1 cut(s) 651
Fnu4HI GCNGC 5 cut(s) 298, 1512, 1690, 1718, 1914
FokI GGATG 8 cut(s) 809, 842, 1453, 1504, 1637, 1774, 1855, 1898
Fsp4HI GCNGC 5 cut(s) 298, 1512, 1690, 1718, 1914
FspBI CTAG 4 cut(s) 600, 681, 1145, 2236
GlaI GCGC 1 cut(s) 213
GluI GCNGC 5 cut(s) 298, 1512, 1690, 1718, 1914
GsuI CTGGAG 1 cut(s) 882
HaeII RGCGCY 1 cut(s) 215
HaeIII GGCC 2 cut(s) 1675, 2155
HapII CCGG 4 cut(s) 638, 734, 1438, 2156
HgaI GACGC 1 cut(s) 159
HhaI GCGC 1 cut(s) 214
Hin1II CATG 7 cut(s) 1853, 1930, 1948, 1975, 2038, 2059, 2177
Hin6I GCGC 1 cut(s) 212
HinP1I GCGC 1 cut(s) 212
HincII GTYRAC 1 cut(s) 1812
HindII GTYRAC 1 cut(s) 1812
HpaII CCGG 4 cut(s) 638, 734, 1438, 2156
HphI GGTGA 4 cut(s) 1345, 1582, 1615, 2189
Hpy166II GTNNAC 4 cut(s) 401, 652, 894, 1812
Hpy188III TCNNGA 9 cut(s) 83, 205, 638, 899, 1438, 1489, 1927, 1945, 2077
Hpy8I GTNNAC 4 cut(s) 401, 652, 894, 1812
Hpy99I CGWCG 2 cut(s) 188, 1464
HpyAV CCTTC 6 cut(s) 11, 202, 330, 582, 1276, 1444
HpyCH4III ACNGT 4 cut(s) 111, 314, 545, 710
HpyCH4IV ACGT 2 cut(s) 886, 2026
HpyF10VI GCNNNNNNNGC 2 cut(s) 1175, 1366
HpySE526I ACGT 2 cut(s) 886, 2026
Hsp92II CATG 7 cut(s) 1853, 1930, 1948, 1975, 2038, 2059, 2177
HspAI GCGC 1 cut(s) 212
Kpn2I TCCGGA 2 cut(s) 637, 1437
LguI GCTCTTC 1 cut(s) 1899
LmnI GCTCC 3 cut(s) 30, 1561, 1707
Lsp1109I GCAGC 4 cut(s) 309, 1523, 1701, 1704
MabI ACCWGGT 1 cut(s) 2112
MaeI CTAG 4 cut(s) 600, 681, 1145, 2236
MaeII ACGT 2 cut(s) 886, 2026
MaeIII GTNAC 6 cut(s) 111, 736, 1039, 1531, 2087, 2231
MbiI CCGCTC 2 cut(s) 1671, 1710
MfeI CAATTG 1 cut(s) 1343
MflI RGATCY 5 cut(s) 71, 419, 821, 1132, 1980
MluI ACGCGT 1 cut(s) 1298
MlyI GAGTC 3 cut(s) 614, 2074, 2095
MmeI TCCRAC 4 cut(s) 49, 910, 1137, 1483
Mph1103I ATGCAT 3 cut(s) 381, 918, 2024
MroI TCCGGA 2 cut(s) 637, 1437
MroXI GAANNNNTTC 3 cut(s) 193, 397, 1422
MseI TTAA 7 cut(s) 150, 216, 221, 818, 872, 1476, 1922
MslI CAYNNNNRTG 3 cut(s) 384, 543, 1803
MspA1I CMGCKG 2 cut(s) 1514, 1692
MspCI CTTAAG 1 cut(s) 149
MspI CCGG 4 cut(s) 638, 734, 1438, 2156
MspR9I CCNGG 2 cut(s) 1137, 2114
MunI CAATTG 1 cut(s) 1343
Mva1269I GAATGC 4 cut(s) 379, 843, 868, 916
MvaI CCWGG 2 cut(s) 1137, 2114
MvnI CGCG 3 cut(s) 1300, 1405, 2010
MwoI GCNNNNNNNGC 2 cut(s) 1175, 1366
NcoI CCATGG 1 cut(s) 2173
NdeI CATATG 1 cut(s) 2139
NlaIII CATG 7 cut(s) 1853, 1930, 1948, 1975, 2038, 2059, 2177
NlaIV GGNNCC 5 cut(s) 1134, 1323, 1563, 1653, 1752
NmuCI GTSAC 4 cut(s) 111, 1039, 2087, 2231
NsiI ATGCAT 3 cut(s) 381, 918, 2024
NspI RCATGY 2 cut(s) 1853, 2059
NspV TTCGAA 1 cut(s) 850
OliI CACNNNNGTG 1 cut(s) 1803
PagI TCATGA 2 cut(s) 1926, 1944
PciI ACATGT 2 cut(s) 1849, 2055
PciSI GCTCTTC 1 cut(s) 1899
PcsI WCGNNNNNNNCGW 2 cut(s) 340, 714
PctI GAATGC 4 cut(s) 379, 843, 868, 916
PdmI GAANNNNTTC 3 cut(s) 193, 397, 1422
PfeI GAWTC 7 cut(s) 237, 923, 1526, 1573, 1930, 2104, 2164
PfoI TCCNGGA 1 cut(s) 1135
PinAI ACCGGT 1 cut(s) 733
PkrI GCNGC 5 cut(s) 299, 1513, 1691, 1719, 1915
Ple19I CGATCG 1 cut(s) 1965
PleI GAGTC 3 cut(s) 613, 2073, 2094
PpsI GAGTC 3 cut(s) 613, 2073, 2094
Ppu21I YACGTR 1 cut(s) 2027
PpuMI RGGWCCY 1 cut(s) 1751
PscI ACATGT 2 cut(s) 1849, 2055
PshAI GACNNNNGTC 1 cut(s) 937
PshBI ATTAAT 1 cut(s) 221
PsiI TTATAA 1 cut(s) 131
Psp5II RGGWCCY 1 cut(s) 1751
Psp6I CCWGG 2 cut(s) 1135, 2112
PspGI CCWGG 2 cut(s) 1135, 2112
PspN4I GGNNCC 5 cut(s) 1134, 1323, 1563, 1653, 1752
PspPI GGNCC 6 cut(s) 891, 932, 1322, 1673, 1730, 1751
PspPPI RGGWCCY 1 cut(s) 1751
PsuI RGATCY 5 cut(s) 71, 419, 821, 1132, 1980
PvuI CGATCG 1 cut(s) 1965
PvuII CAGCTG 1 cut(s) 1514
RsaI GTAC 5 cut(s) 311, 565, 1642, 2029, 2060
RsaNI GTAC 5 cut(s) 310, 564, 1641, 2028, 2059
RseI CAYNNNNRTG 3 cut(s) 384, 543, 1803
SapI GCTCTTC 1 cut(s) 1899
SaqAI TTAA 7 cut(s) 150, 216, 221, 818, 872, 1476, 1922
SatI GCNGC 5 cut(s) 298, 1512, 1690, 1718, 1914
Sau96I GGNCC 6 cut(s) 891, 932, 1322, 1673, 1730, 1751
SchI GAGTC 3 cut(s) 614, 2074, 2095
ScrFI CCNGG 2 cut(s) 1137, 2114
SexAI ACCWGGT 1 cut(s) 2112
SfcI CTRYAG 1 cut(s) 477
SfuI TTCGAA 1 cut(s) 850
SinI GGWCC 5 cut(s) 891, 932, 1322, 1730, 1751
SmiMI CAYNNNNRTG 3 cut(s) 384, 543, 1803
SmlI CTYRAG 3 cut(s) 149, 359, 1118
SmoI CTYRAG 3 cut(s) 149, 359, 1118
SnaBI TACGTA 1 cut(s) 2027
SsiI CCGC 9 cut(s) 44, 439, 1169, 1671, 1692, 1710, 1748, 1913, 2008
SspMI CTAG 4 cut(s) 600, 681, 1145, 2236
StyD4I CCNGG 2 cut(s) 1135, 2112
StyI CCWWGG 3 cut(s) 277, 1207, 2173
TaaI ACNGT 4 cut(s) 111, 314, 545, 710
TaiI ACGT 2 cut(s) 889, 2029
TatI WGTACW 2 cut(s) 1640, 2058
TauI GCSGC 1 cut(s) 1916
TfiI GAWTC 7 cut(s) 237, 923, 1526, 1573, 1930, 2104, 2164
Tru1I TTAA 7 cut(s) 150, 216, 221, 818, 872, 1476, 1922
Tru9I TTAA 7 cut(s) 150, 216, 221, 818, 872, 1476, 1922
TscAI CASTG 2 cut(s) 550, 810
TseFI GTSAC 4 cut(s) 111, 1039, 2087, 2231
TseI GCWGC 4 cut(s) 297, 1511, 1689, 1717
Tsp45I GTSAC 4 cut(s) 111, 1039, 2087, 2231
TspDTI ATGAA 9 cut(s) 498, 1415, 1539, 1857, 1943, 1961, 2051, 2108, 2195
TspGWI ACGGA 5 cut(s) 130, 201, 1058, 1121, 1722
TspRI CASTG 2 cut(s) 550, 810
Vha464I CTTAAG 1 cut(s) 149
VpaK11BI GGWCC 5 cut(s) 891, 932, 1322, 1730, 1751
VspI ATTAAT 1 cut(s) 221
XapI RAATTY 2 cut(s) 269, 1306
XceI RCATGY 2 cut(s) 1853, 2059
XmiI GTMKAC 1 cut(s) 651
XmnI GAANNNNTTC 3 cut(s) 193, 397, 1422
XspI CTAG 4 cut(s) 600, 681, 1145, 2236
Zsp2I ATGCAT 3 cut(s) 381, 918, 2024
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.