Basic Information

Type: gene

Biological Identity

Species

prunus_persica

Chromosome

Pp01

Orthogroup ID

OG0002463

Physical Location & Seq

Genomic Coordinates Reverse (-)

19480876 .. 19494561

Gene Structure 13686 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Prupe.1G200000.32

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2115 bp

ATGCCTTGTGGAGGTGGCGAGGATAAGCAATGGGGTTGTGGGAAATGTGGTGCCGCTGTTAATTTGCAAAGAGTTGGTTCAATTGTCCGTGACATTGGCGACCCATGCCTCTCGCAGTCGCCTATAAAGGTGGTTATAGCTGTGAACAAAATGCTTAAACCGGAGAAGTGGCAGGCAACATTTGATAGCGATGGGAAGAATTTTTGTTTTCAGAAGGCACTCAAATTAATAGTATTGGGGGGCGTTGATCAATCTATAAGGCCAGAAGTGTGGGAATTTTTACTTGGTTGTTATGCTCTGGGTAGTACTGCGGAGTCTCGAAGGCAGTTGCGGACAGCCCGGAGGGAACGTTACAGGGACCTGATTAAGCAGTGCCAAATGATGCATTCAAGCATTGGAACTGGTTCACTTGCTTATGTTGTTGGGTCCAAGGTTATGGATGTTAGGGCACCGTCTAAAGATGACGAAGGAGGGGAAGCTAAAGTTGAACATAGACAAACTTCTTTTGATAATACTAACAAAGTAGAGAACTATTGTGATAGGAATAATAATTGTACAGATACATCATATGCATGCCAACAAGAGAGTTCTAGTGAGTCGGCCGACCTTGTCAGTGTGAGGGAAAGCACAGATAGTGCAGCATATGATTCTTCTTGTTTCATACATACTTCTAGTCCACATGACTGCAGCTCCCCAAAGCTAGGGAGAGAAGCAGATGGAACAAAATATGTACCAAAAAGTTATTTTGAATATCCTACTTTACCGGTCGCTGATTTGTTTGAAAAGTGTGAAGAAGATGATGAAGGTCGTGTGTCTGATGATAAACTTTCTGCGCAATGTAAGTCAAGGTTGAAAAAGGACAGCATGCACAGTTTTCAAGTCAATAACAATGTAGATTTAGTTATTGAATCAAATTGCTCACCATCCAAGAATGTTTCACGCACCATTAACTCTGAAATTGAAATGGTTCGTACTGATGCCCATCATTCAGTATTGCAGTCCAATAATATGGGTAAGAAGAAAGAAATAGTAAACAGGATGAGAATATCAGATGTACCAGATACAGAATTTAGAAATACAACAATGTCTCAAGGAGGGACTGTGAGTGAAGACAGAGTATCTGAATGGCTTTGGACTCTCCACCGAATAGTTGTTGATGTGGTAAGAACAGACAGTCATCTTGAATTCTATGAGGATGCAAAAAATTTAGCTAGGATGTCAGATATTCTTGCTGTTTACGCGTGGGTTGATCCAGCAACCGGATATTGTCAAGGTATGAGTGACTTGCTGTCTCCATTTGTCGTCCTGTTTGAGGATAATGCTGATGCGTTTTGGTGCTTTGAGATGCTTCTAAGGAGAATGCGGGAAAATTTTCAGATGGAAGGACCAACTGGGGTAATGAAGCAGTTGCAAGCATTGTGGAATATCTTGGAACTCACAGACAGGGAAATGTTTGCACACCTGTCACACATAGGTGCTGAAAGCCTTCATTTTGCATTTCGGATGCTGCTGGTACTCTTCCGTCGGGAGTTATCGTTTGATGATGCTCTTTGTATGTGGGAGATGATGTGGGCTGCTGATTTTCAAGAATCCTTGGCTTACAATTTAGAGGACAGCTGTCTAGAAGCCTTGGTGGTGCAGCTTCCTAGGGATTTGGAAGCAGAAATGAGGGGTGAAAGTGCGGAGGGTGGTGGTGATATGAAGGGCGGCTCACATTCAAATCATGGAAATCCGGAACACTCCATGTCTGACACTGGAATGAAATCAGCATCAACATATCATTTTTGTGGGTTGACAAGGAATTTTTGGTCAAAGAATGATCGCATGCACATCTGCACTGCAGTCTCATCAACTAGGAATGGGGATGATGAGTTACCGGTCTTCTGTGTTGCCGCAATCCTCATCATGAACCGCCAGAAAATCATTCGTCAGACGCGCTCAATTGATGATATGATAAAGATTTTCAATGATAATTTGCTGAAAATCAGTGTCAAAAGATGCATCCGCACAGCAGTCAAGCTTCGGAAGAAATATTTCTACAAGGTGGACAGGTTGGCTTATTGGTCCTCCCAGTTATGCTCATTGGGTGCTTGGCGGGCAAAAAAAGGCCCATGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0005096 GO:0005488 GO:0005515 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005829 GO:0006810 GO:0006886 GO:0008047 GO:0008104 GO:0008150 GO:0012505 GO:0012506 GO:0015031 GO:0015833 GO:0016020 GO:0017016 GO:0017137 GO:0019899 GO:0030234 GO:0030659 GO:0030695 GO:0031090 GO:0031267 GO:0031338 GO:0031410 GO:0031982 GO:0032879 GO:0033036 GO:0033043 GO:0034613 GO:0042886 GO:0043085 GO:0043087 GO:0043226 GO:0043227 GO:0043229 GO:0043547 GO:0044093 GO:0044422 GO:0044424 GO:0044433 GO:0044444 GO:0044446 GO:0044464 GO:0045184 GO:0046907 GO:0050789 GO:0050790 GO:0050794 GO:0051020 GO:0051049 GO:0051128 GO:0051179 GO:0051234 GO:0051336 GO:0051345 GO:0051641 GO:0051649 GO:0060589 GO:0060627 GO:0065007 GO:0065009 GO:0070727 GO:0071702 GO:0071705 GO:0090630 GO:0097708 GO:0098772

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

RabGAP-TBC

Protein Analysis

705

Amino Acids

79.58

Weight (kDa)

5.93

Isoelectric Point (pI)

46.93

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0002463)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT2G43490 AT2G43490 AT2G43490 AT2G43490 AT2G43490 AT2G43490 AT2G43490 AT2G43490
malus_domestica	MD04G1046500.v1.1
prunus_persica	Prupe.1G200000_v2.0.a1 Prupe.1G200000_v2.0.a1 Prupe.1G200000_v2.0.a1 Prupe.1G200000_v2.0.a1 Prupe.1G200000_v2.0.a1 Prupe.1G200000_v2.0.a1 Prupe.1G200000_v2.0.a1 Prupe.1G200000_v2.0.a1 Prupe.1G200000_v2.0.a1 Prupe.1G200000_v2.0.a1 Prupe.1G200000_v2.0.a1 Prupe.1G200000_v2.0.a1 Prupe.1G200000_v2.0.a1 Prupe.1G200000_v2.0.a1 Prupe.1G200000_v2.0.a1 Prupe.1G200000_v2.0.a1 Prupe.1G200000_v2.0.a1 Prupe.1G200000_v2.0.a1 Prupe.1G200000_v2.0.a1 Prupe.1G200000_v2.0.a1 Prupe.1G200000_v2.0.a1 Prupe.1G200000_v2.0.a1 Prupe.1G200000_v2.0.a1 Prupe.1G200000_v2.0.a1 Prupe.1G200000_v2.0.a1 Prupe.1G200000_v2.0.a1 Prupe.1G200000_v2.0.a1 Prupe.1G200000_v2.0.a1 Prupe.1G200000_v2.0.a1 Prupe.1G200000_v2.0.a1
pyrus_communis	pycom04g04040 pycom13g26960

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
Acc16I	TGCGCA	1 cut(s)	834
AccB1I	GGYRCC	2 cut(s)	50, 448
AccII	CGCG	2 cut(s)	1241, 1936
AccIII	TCCGGA	1 cut(s)	1732
AclI	AACGTT	1 cut(s)	349
AclWI	GGATC	1 cut(s)	1244
AcoI	YGGCCR	1 cut(s)	600
AcsI	RAATTY	7 cut(s)	199, 275, 1067, 1184, 1204, 1369, 1801
AfaI	GTAC	6 cut(s)	307, 556, 732, 973, 1056, 1515
AfiI	CCNNNNNNNGG	4 cut(s)	11, 701, 1259, 1312
AflIII	ACRYGT	1 cut(s)	1239
AgeI	ACCGGT	2 cut(s)	763, 1876
AhdI	GACNNNNNGTC	1 cut(s)	1288
AjuI	GAANNNNNNNTTGG	2 cut(s)	267, 299
AleI	CACNNNNGTG	1 cut(s)	1473
AluBI	AGCT	8 cut(s)	140, 479, 690, 700, 1211, 1617, 1642, 2020
AluI	AGCT	8 cut(s)	140, 479, 690, 700, 1211, 1617, 1642, 2020
Alw26I	GTCTC	4 cut(s)	321, 1092, 1296, 1849
AlwI	GGATC	1 cut(s)	1244
Aor13HI	TCCGGA	1 cut(s)	1732
AoxI	GGCC	3 cut(s)	260, 600, 2107
ApeKI	GCWGC	5 cut(s)	638, 687, 1507, 1574, 1639
ApoI	RAATTY	7 cut(s)	199, 275, 1067, 1184, 1204, 1369, 1801
AseI	ATTAAT	1 cut(s)	227
AsiGI	ACCGGT	2 cut(s)	763, 1876
Asp700I	GAANNNNTTC	5 cut(s)	403, 966, 1371, 1485, 2033
AspA2I	CCTAGG	1 cut(s)	1646
AspLEI	GCGC	2 cut(s)	835, 1938
AspS9I	GGNCC	5 cut(s)	358, 426, 1385, 2064, 2108
AsuC2I	CCSGG	1 cut(s)	340
AsuHPI	GGTGA	3 cut(s)	912, 1685, 1706
AvaII	GGWCC	4 cut(s)	358, 426, 1385, 2064
AvrII	CCTAGG	1 cut(s)	1646
BaeGI	GKGCMC	1 cut(s)	451
BanI	GGYRCC	2 cut(s)	50, 448
BbsI	GAAGAC	2 cut(s)	1116, 1873
BbvI	GCAGC	5 cut(s)	650, 699, 1494, 1561, 1651
BccI	CCATC	5 cut(s)	185, 710, 931, 990, 1372
BclI	TGATCA	1 cut(s)	247
BcnI	CCSGG	1 cut(s)	340
BcoDI	GTCTC	4 cut(s)	321, 1092, 1296, 1849
BfaI	CTAG	7 cut(s)	591, 672, 701, 1212, 1622, 1647, 1854
BfmI	CTRYAG	2 cut(s)	685, 1839
BisI	GCNGC	8 cut(s)	54, 639, 688, 1508, 1575, 1640, 1708, 1893
BlnI	CCTAGG	1 cut(s)	1646
BlsI	GCNGC	8 cut(s)	55, 640, 689, 1509, 1576, 1641, 1709, 1894
BmcAI	AGTACT	1 cut(s)	307
Bme1390I	CCNGG	1 cut(s)	340
Bme18I	GGWCC	4 cut(s)	358, 426, 1385, 2064
BmeRI	GACNNNNNGTC	1 cut(s)	1288
BmgT120I	GGNCC	5 cut(s)	358, 426, 1385, 2064, 2108
BmiI	GGNNCC	4 cut(s)	52, 359, 427, 450
BmrFI	CCNGG	1 cut(s)	340
BmrI	ACTGGG	2 cut(s)	1401, 2065
BmuI	ACTGGG	2 cut(s)	1401, 2065
BoxI	GACNNNNGTC	1 cut(s)	1617
BpiI	GAAGAC	2 cut(s)	1116, 1873
BpuEI	CTTGAG	1 cut(s)	1074
BpuMI	CCSGG	1 cut(s)	340
BsaBI	GATNNNNATC	1 cut(s)	981
BsaJI	CCNNGG	4 cut(s)	429, 1593, 1629, 1646
BsaWI	WCCGGW	5 cut(s)	160, 763, 1259, 1732, 1876
Bsc4I	CCNNNNNNNGG	4 cut(s)	11, 701, 1259, 1312
Bse118I	RCCGGY	2 cut(s)	763, 1876
Bse1I	ACTGG	4 cut(s)	406, 1396, 1759, 2071
Bse3DI	GCAATG	2 cut(s)	35, 842
Bse8I	GATNNNNATC	1 cut(s)	981
BseAI	TCCGGA	1 cut(s)	1732
BseDI	CCNNGG	4 cut(s)	429, 1593, 1629, 1646
BseGI	GGATG	8 cut(s)	445, 923, 1044, 1201, 1221, 1509, 1870, 2001
BseJI	GATNNNNATC	1 cut(s)	981
BseLI	CCNNNNNNNGG	4 cut(s)	11, 701, 1259, 1312
BseMI	GCAATG	2 cut(s)	35, 842
BseNI	ACTGG	4 cut(s)	406, 1396, 1759, 2071
BseSI	GKGCMC	1 cut(s)	451
BseX3I	CGGCCG	1 cut(s)	600
BseXI	GCAGC	5 cut(s)	650, 699, 1494, 1561, 1651
BsgI	GTGCAG	3 cut(s)	657, 1658, 1819
Bsh1236I	CGCG	2 cut(s)	1241, 1936
Bsh1285I	CGRYCG	2 cut(s)	603, 768
BshFI	GGCC	3 cut(s)	262, 602, 2109
BshNI	GGYRCC	2 cut(s)	50, 448
BshTI	ACCGGT	2 cut(s)	763, 1876
BsiEI	CGRYCG	2 cut(s)	603, 768
BsiSI	CCGG	6 cut(s)	161, 340, 764, 1260, 1733, 1877
BslFI	GGGAC	2 cut(s)	371, 1111
BslI	CCNNNNNNNGG	4 cut(s)	11, 701, 1259, 1312
BsmAI	GTCTC	4 cut(s)	321, 1092, 1296, 1849
BsmFI	GGGAC	2 cut(s)	371, 1111
BsmI	GAATGC	2 cut(s)	385, 1365
BsnI	GGCC	3 cut(s)	262, 602, 2109
Bsp1286I	GDGCHC	1 cut(s)	451
Bsp13I	TCCGGA	1 cut(s)	1732
Bsp1407I	TGTACA	1 cut(s)	554
Bsp143I	GATC	3 cut(s)	247, 1249, 1819
BspANI	GGCC	3 cut(s)	262, 602, 2109
BspEI	TCCGGA	1 cut(s)	1732
BspFNI	CGCG	2 cut(s)	1241, 1936
BspHI	TCATGA	1 cut(s)	1905
BspLI	GGNNCC	4 cut(s)	52, 359, 427, 450
BspMAI	CTGCAG	2 cut(s)	689, 1843
BspPI	GGATC	1 cut(s)	1244
BspT107I	GGYRCC	2 cut(s)	50, 448
BsrDI	GCAATG	2 cut(s)	35, 842
BsrFI	RCCGGY	2 cut(s)	763, 1876
BsrGI	TGTACA	1 cut(s)	554
BsrI	ACTGG	4 cut(s)	406, 1396, 1759, 2071
BssAI	RCCGGY	2 cut(s)	763, 1876
BssECI	CCNNGG	4 cut(s)	429, 1593, 1629, 1646
BssMI	GATC	3 cut(s)	247, 1249, 1819
BssT1I	CCWWGG	4 cut(s)	429, 1593, 1629, 1646
Bst4CI	ACNGT	4 cut(s)	453, 872, 1102, 1175
Bst6I	CTCTTC	1 cut(s)	1523
BstAUI	TGTACA	1 cut(s)	554
BstC8I	GCNNGC	6 cut(s)	174, 574, 866, 1413, 1826, 2097
BstDEI	CTNAG	1 cut(s)	1352
BstENI	CCTNNNNNAGG	2 cut(s)	9, 1310
BstF5I	GGATG	8 cut(s)	445, 923, 1044, 1201, 1221, 1509, 1870, 2001
BstFNI	CGCG	2 cut(s)	1241, 1936
BstHHI	GCGC	2 cut(s)	835, 1938
BstKTI	GATC	3 cut(s)	250, 1252, 1822
BstMAI	GTCTC	4 cut(s)	321, 1092, 1296, 1849
BstMBI	GATC	3 cut(s)	247, 1249, 1819
BstMCI	CGRYCG	2 cut(s)	603, 768
BstMWI	GCNNNNNNNGC	3 cut(s)	105, 1238, 2096
BstNSI	RCATGY	3 cut(s)	576, 868, 1828
BstPAI	GACNNNNGTC	1 cut(s)	1617
BstSCI	CCNGG	1 cut(s)	338
BstSFI	CTRYAG	2 cut(s)	685, 1839
BstSLI	GKGCMC	1 cut(s)	451
BstUI	CGCG	2 cut(s)	1241, 1936
BstV1I	GCAGC	5 cut(s)	650, 699, 1494, 1561, 1651
BstV2I	GAAGAC	2 cut(s)	1116, 1873
BstXI	CCANNNNNNTGG	3 cut(s)	270, 436, 1009
BstZI	CGGCCG	1 cut(s)	600
BsuRI	GGCC	3 cut(s)	262, 602, 2109
BtgZI	GCGATG	1 cut(s)	204
BtsCI	GGATG	8 cut(s)	445, 923, 1044, 1201, 1221, 1509, 1870, 2001
BtsI	GCAGTG	2 cut(s)	377, 1836
BtsIMutI	CAGTG	5 cut(s)	377, 619, 1752, 1836, 1993
Cac8I	GCNNGC	6 cut(s)	174, 574, 866, 1413, 1826, 2097
CciI	TCATGA	1 cut(s)	1905
CfoI	GCGC	2 cut(s)	835, 1938
Cfr10I	RCCGGY	2 cut(s)	763, 1876
Cfr13I	GGNCC	5 cut(s)	358, 426, 1385, 2064, 2108
CseI	GACGC	1 cut(s)	1942
Csp6I	GTAC	6 cut(s)	306, 555, 731, 972, 1055, 1514
CspAI	ACCGGT	2 cut(s)	763, 1876
CspCI	CAANNNNNGTGG	2 cut(s)	1400, 1435
CviAII	CATG	9 cut(s)	105, 573, 680, 865, 1724, 1744, 1825, 1906, 2112
CviQI	GTAC	6 cut(s)	306, 555, 731, 972, 1055, 1514
DdeI	CTNAG	1 cut(s)	1352
DpnI	GATC	3 cut(s)	249, 1251, 1821
DpnII	GATC	3 cut(s)	247, 1249, 1819
DriI	GACNNNNNGTC	1 cut(s)	1288
EaeI	YGGCCR	1 cut(s)	600
EagI	CGGCCG	1 cut(s)	600
Eam1104I	CTCTTC	1 cut(s)	1523
Eam1105I	GACNNNNNGTC	1 cut(s)	1288
EarI	CTCTTC	1 cut(s)	1523
EclXI	CGGCCG	1 cut(s)	600
Eco130I	CCWWGG	4 cut(s)	429, 1593, 1629, 1646
Eco47I	GGWCC	4 cut(s)	358, 426, 1385, 2064
Eco52I	CGGCCG	1 cut(s)	600
EcoNI	CCTNNNNNAGG	2 cut(s)	9, 1310
EcoO109I	RGGNCCY	1 cut(s)	358
EcoRI	GAATTC	1 cut(s)	1184
EcoT14I	CCWWGG	4 cut(s)	429, 1593, 1629, 1646
EcoT22I	ATGCAT	3 cut(s)	387, 574, 2003
ErhI	CCWWGG	4 cut(s)	429, 1593, 1629, 1646
FaeI	CATG	9 cut(s)	108, 576, 683, 868, 1727, 1747, 1828, 1909, 2115
FaqI	GGGAC	2 cut(s)	371, 1111
FatI	CATG	9 cut(s)	104, 572, 679, 864, 1723, 1743, 1824, 1905, 2111
FauI	CCCGC	2 cut(s)	1356, 2088
FauNDI	CATATG	2 cut(s)	568, 643
FbaI	TGATCA	1 cut(s)	247
Fnu4HI	GCNGC	8 cut(s)	54, 639, 688, 1508, 1575, 1640, 1708, 1893
FokI	GGATG	8 cut(s)	452, 910, 1051, 1208, 1228, 1516, 1877, 1988
Fsp4HI	GCNGC	8 cut(s)	54, 639, 688, 1508, 1575, 1640, 1708, 1893
FspBI	CTAG	7 cut(s)	591, 672, 701, 1212, 1622, 1647, 1854
FspI	TGCGCA	1 cut(s)	834
GlaI	GCGC	2 cut(s)	834, 1937
GluI	GCNGC	8 cut(s)	54, 639, 688, 1508, 1575, 1640, 1708, 1893
HaeIII	GGCC	3 cut(s)	262, 602, 2109
HapII	CCGG	6 cut(s)	161, 340, 764, 1260, 1733, 1877
HgaI	GACGC	1 cut(s)	1942
HhaI	GCGC	2 cut(s)	835, 1938
Hin1II	CATG	9 cut(s)	108, 576, 683, 868, 1727, 1747, 1828, 1909, 2115
Hin6I	GCGC	2 cut(s)	833, 1936
HinP1I	GCGC	2 cut(s)	833, 1936
HincII	GTYRAC	1 cut(s)	1794
HindII	GTYRAC	1 cut(s)	1794
HindIII	AAGCTT	1 cut(s)	2018
HinfI	GANTC	6 cut(s)	314, 596, 647, 908, 1135, 1589
HpaII	CCGG	6 cut(s)	161, 340, 764, 1260, 1733, 1877
HphI	GGTGA	3 cut(s)	912, 1685, 1706
Hpy166II	GTNNAC	7 cut(s)	145, 407, 677, 1033, 1237, 1794, 2047
Hpy188III	TCNNGA	7 cut(s)	318, 1181, 1526, 1586, 1622, 1733, 1906
Hpy8I	GTNNAC	7 cut(s)	145, 407, 677, 1033, 1237, 1794, 2047
Hpy99I	CGWCG	1 cut(s)	1527
HpyAV	CCTTC	7 cut(s)	208, 315, 461, 797, 1376, 1496, 1696
HpyCH4III	ACNGT	4 cut(s)	453, 872, 1102, 1175
HpyCH4IV	ACGT	1 cut(s)	349
HpyF10VI	GCNNNNNNNGC	3 cut(s)	105, 1238, 2096
HpyF3I	CTNAG	1 cut(s)	1352
HpySE526I	ACGT	1 cut(s)	349
Hsp92II	CATG	9 cut(s)	108, 576, 683, 868, 1727, 1747, 1828, 1909, 2115
HspAI	GCGC	2 cut(s)	833, 1936
Kpn2I	TCCGGA	1 cut(s)	1732
Ksp22I	TGATCA	1 cut(s)	247
Kzo9I	GATC	3 cut(s)	247, 1249, 1819
LmnI	GCTCC	1 cut(s)	695
Lsp1109I	GCAGC	5 cut(s)	650, 699, 1494, 1561, 1651
MaeI	CTAG	7 cut(s)	591, 672, 701, 1212, 1622, 1647, 1854
MaeII	ACGT	1 cut(s)	349
MaeIII	GTNAC	5 cut(s)	89, 350, 1280, 1464, 1872
MalI	GATC	3 cut(s)	249, 1251, 1821
MboI	GATC	3 cut(s)	247, 1249, 1819
MboII	GAAGA	9 cut(s)	208, 642, 803, 806, 1030, 1121, 1510, 1873, 2038
MfeI	CAATTG	2 cut(s)	81, 1941
MhlI	GDGCHC	1 cut(s)	451
MluI	ACGCGT	1 cut(s)	1239
MlyI	GAGTC	3 cut(s)	323, 605, 1129
Mph1103I	ATGCAT	3 cut(s)	387, 574, 2003
MroI	TCCGGA	1 cut(s)	1732
MroXI	GAANNNNTTC	5 cut(s)	403, 966, 1371, 1485, 2033
MseI	TTAA	5 cut(s)	60, 156, 227, 366, 948
MslI	CAYNNNNRTG	4 cut(s)	571, 1473, 1757, 1785
MspA1I	CMGCKG	2 cut(s)	56, 1617
MspI	CCGG	6 cut(s)	161, 340, 764, 1260, 1733, 1877
MspR9I	CCNGG	1 cut(s)	340
MunI	CAATTG	2 cut(s)	81, 1941
Mva1269I	GAATGC	2 cut(s)	385, 1365
MvnI	CGCG	2 cut(s)	1241, 1936
MwoI	GCNNNNNNNGC	3 cut(s)	105, 1238, 2096
NciI	CCSGG	1 cut(s)	340
NdeI	CATATG	2 cut(s)	568, 643
NdeII	GATC	3 cut(s)	247, 1249, 1819
NlaIII	CATG	9 cut(s)	108, 576, 683, 868, 1727, 1747, 1828, 1909, 2115
NlaIV	GGNNCC	4 cut(s)	52, 359, 427, 450
NmuCI	GTSAC	3 cut(s)	89, 1280, 1464
NsbI	TGCGCA	1 cut(s)	834
NsiI	ATGCAT	3 cut(s)	387, 574, 2003
NspI	RCATGY	3 cut(s)	576, 868, 1828
OliI	CACNNNNGTG	1 cut(s)	1473
PaeI	GCATGC	3 cut(s)	576, 868, 1828
PagI	TCATGA	1 cut(s)	1905
PctI	GAATGC	2 cut(s)	385, 1365
PdmI	GAANNNNTTC	5 cut(s)	403, 966, 1371, 1485, 2033
PfeI	GAWTC	3 cut(s)	647, 908, 1589
PflFI	GACNNNGTC	1 cut(s)	608
PinAI	ACCGGT	2 cut(s)	763, 1876
PkrI	GCNGC	8 cut(s)	55, 640, 689, 1509, 1576, 1641, 1709, 1894
PleI	GAGTC	3 cut(s)	322, 604, 1129
PpsI	GAGTC	3 cut(s)	322, 604, 1129
PpuMI	RGGWCCY	1 cut(s)	358
PshAI	GACNNNNGTC	1 cut(s)	1617
PshBI	ATTAAT	1 cut(s)	227
Psp1406I	AACGTT	1 cut(s)	349
Psp5II	RGGWCCY	1 cut(s)	358
PspN4I	GGNNCC	4 cut(s)	52, 359, 427, 450
PspPI	GGNCC	5 cut(s)	358, 426, 1385, 2064, 2108
PspPPI	RGGWCCY	1 cut(s)	358
PstI	CTGCAG	2 cut(s)	689, 1843
PsyI	GACNNNGTC	1 cut(s)	608
PvuII	CAGCTG	1 cut(s)	1617
RsaI	GTAC	6 cut(s)	307, 556, 732, 973, 1056, 1515
RsaNI	GTAC	6 cut(s)	306, 555, 731, 972, 1055, 1514
RseI	CAYNNNNRTG	4 cut(s)	571, 1473, 1757, 1785
SaqAI	TTAA	5 cut(s)	60, 156, 227, 366, 948
SatI	GCNGC	8 cut(s)	54, 639, 688, 1508, 1575, 1640, 1708, 1893
Sau3AI	GATC	3 cut(s)	247, 1249, 1819
Sau96I	GGNCC	5 cut(s)	358, 426, 1385, 2064, 2108
ScaI	AGTACT	1 cut(s)	307
SchI	GAGTC	3 cut(s)	323, 605, 1129
ScrFI	CCNGG	1 cut(s)	340
SduI	GDGCHC	1 cut(s)	451
SfcI	CTRYAG	2 cut(s)	685, 1839
SinI	GGWCC	4 cut(s)	358, 426, 1385, 2064
SmiMI	CAYNNNNRTG	4 cut(s)	571, 1473, 1757, 1785
SmlI	CTYRAG	1 cut(s)	1089
SmoI	CTYRAG	1 cut(s)	1089
SphI	GCATGC	3 cut(s)	576, 868, 1828
SspI	AATATT	1 cut(s)	2033
SspMI	CTAG	7 cut(s)	591, 672, 701, 1212, 1622, 1647, 1854
StyD4I	CCNGG	1 cut(s)	338
StyI	CCWWGG	4 cut(s)	429, 1593, 1629, 1646
TaaI	ACNGT	4 cut(s)	453, 872, 1102, 1175
TaiI	ACGT	1 cut(s)	352
TaqI	TCGA	1 cut(s)	319
TatI	WGTACW	2 cut(s)	305, 554
TauI	GCSGC	3 cut(s)	56, 1710, 1895
TfiI	GAWTC	3 cut(s)	647, 908, 1589
Tru1I	TTAA	5 cut(s)	60, 156, 227, 366, 948
Tru9I	TTAA	5 cut(s)	60, 156, 227, 366, 948
TscAI	CASTG	5 cut(s)	377, 619, 1759, 1843, 1993
TseFI	GTSAC	3 cut(s)	89, 1280, 1464
TseI	GCWGC	5 cut(s)	638, 687, 1507, 1574, 1639
Tsp45I	GTSAC	3 cut(s)	89, 1280, 1464
TspDTI	ATGAA	7 cut(s)	649, 816, 1415, 1478, 1715, 1775, 1922
TspGWI	ACGGA	2 cut(s)	77, 1511
TspRI	CASTG	5 cut(s)	377, 619, 1759, 1843, 1993
Tth111I	GACNNNGTC	1 cut(s)	608
VpaK11BI	GGWCC	4 cut(s)	358, 426, 1385, 2064
VspI	ATTAAT	1 cut(s)	227
XagI	CCTNNNNNAGG	2 cut(s)	9, 1310
XapI	RAATTY	7 cut(s)	199, 275, 1067, 1184, 1204, 1369, 1801
XbaI	TCTAGA	1 cut(s)	1621
XceI	RCATGY	3 cut(s)	576, 868, 1828
XmaJI	CCTAGG	1 cut(s)	1646
XmnI	GAANNNNTTC	5 cut(s)	403, 966, 1371, 1485, 2033
XspI	CTAG	7 cut(s)	591, 672, 701, 1212, 1622, 1647, 1854
ZrmI	AGTACT	1 cut(s)	307
Zsp2I	ATGCAT	3 cut(s)	387, 574, 2003

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.