Basic Information

Type: gene

Biological Identity

Species

pyrus_communis

Chromosome

Chr4

Orthogroup ID

OG0002463

Physical Location & Seq

Genomic Coordinates Reverse (-)

3627627 .. 3636246

Gene Structure 8620 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

pycom04g04040.2

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2088 bp

ATGTCTTGTGGAGGTGAAGAGGACAAGCAATGTGGTTGTGGGAAATCAGGTGCCGCCATTAATTTGCAAAGAGTTGGTTCAATTGTGCGAGAGATTAGCGACCCATGCCTCTCTCAGTCACCTATAAAGGTGGTTATAACTGTGAACAAAATGCTTAAGCCGGAGAAGTGGCAGGCAACATTTGATAGCGATGGGAAGAATTTTGGTTTTCAGAAGGCACTCAAATTAATAGCATTGGGGGGTGTCGATCCATCTATAAGACCAGAAGTCTGGGAATTTTTACTTGGTTGTTATGCTCTGGGTAGCACTGAAGAGTCTCGGCGGCAGTTGCGGACAGCCCGGAGGGAACGTTACAGTGACCTGATTAAGCAGTGCCAAATGATCCATTCAAGCATTGGAACTGGTTCACTTGCTTATGTTGTTGGGTCCAAGGTTATGGATGTGAGGGCACCGTCTAAAGAGGAGGATGGGAGGGAAGCTAAAGTTGAACATAGACAAACTTCTTTTGATAATACTAACAAAGTAGAGAATTATTGTGATAGGAATAATAATTGTACAGATACATCATATGCATGCCAACAAGAGAGTTCTAGCGATTCGGTTGACCTTGTCAGTCTGAGGGAGAGCACAGATAGTGTAGCATATGATTCTTCTTCTTTCATACGTACTTCAGGGCCACATGACTGCAGCTCCCCAAAGCTAGGGAGCGAAGCAGATGAAACAAAACATGTACCACAAAGTTATTTTGACTTTCCTCCTTTACCTGTTGCTGATTTGTTTGGAAAGTGTGAAGAAGATAAAAAAGAAGGTGGAGTGCACGATGATAAAGTTTCTCTGCAACATAAGTCCAGGTCGAAAAAGGACAGCATGCACAGTTTTCAAGTCAATAACAATGTAGACTTAGTTATTGAATCAAACTGCTCACCATCCAAGAAAGTTTCATGTGTCATTAACTCTGAAATTGAATTGGTTTCTACTGATGCCCATCAATCGGTGACGCAGCTGAATAATATGGGTAACAAGACAGAAATGGTAAACGGGTTGAAAATATCGGATGTACCAGAAACAGAATTTAGAAATACAATCATGTCTCAAGGAGGGGCTGTGAATGAAGACAGGGTATCTGAATGGCTTTGGACTCTCCACCGAATAGTTGTTGATGTGGTAAGAACAGATAGTCATCTTGAATTCTACGAGGATGCTAAAAATTTAGCTAGGATGTCAGATATTCTTGCTGTTTATGCATGGGTGGATCCAGCTACGGGATATTGTCAAGGTATGAGTGACTTGCTGTCTCCATTTGTGGTTCTCTTTGAGGATGATGCTGATGCATTTTGGTGCTTTGAGATGCTTCTAAGAAGAATGCGTGAAAATTTCCAAATGGAAGGACCGACTGGGGTAATGAAGCAGTTGCAAGGATTGTGGAATATCTTGGAACTCACAGACAGGGAAATGTTTTCACACCTGTCACACATAGGTGCTGAAAGCCTGCATTTTGCATTCCGGATGCTGCTTGTTCTCTTTCGTCGGGAGTTGTCTTTTAATGATGCTCTTTGTATGTGGGAGATGATGTGGGCCGCTGATTTTCAAGAATCCTTGGCTTACAATTTAGATGACAACTGTCTGGAAGCCTTGGTAGTACAACTTCCGAGTGATTCTGAAGCAGAATTGAGGGTTGAAACTGCTGAGAGTGGTGGTCATACAAAGAGCGGATCACATTCAAATAGTGGCAATCTAGAATGCTCCGTGTCTGACACTGGAATGAAGTCTGGATCAGCCTATAATTTTTGCGGGTTGACAAGGAATTTTTGGTCAAGGAATGACCGGATGCACATCTGCTCTGTGGTCTCATCAACAAGGAATGGAGATGATGAATTACCGGTCTTCTGTGTTGCAGCAATCCTCATCATGAACCGTCAGAAAATTATTCGCGAGACGCGTTCAATTGATGATATGATAAAGACTTTCAATGATAAGTTGCTGAAAATCAATGTGAAAAGATGCATCCGCTCAGCGGTCAAGCTTCGGAAGAAATATTTCTACAAGCTTATCAGGAGAAACAGCCCTGCAGCTCGGAATGGTGACTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0005096 GO:0005488 GO:0005515 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005829 GO:0006810 GO:0006886 GO:0008047 GO:0008104 GO:0008150 GO:0012505 GO:0012506 GO:0015031 GO:0015833 GO:0016020 GO:0017016 GO:0017137 GO:0019899 GO:0030234 GO:0030659 GO:0030695 GO:0031090 GO:0031267 GO:0031338 GO:0031410 GO:0031982 GO:0032879 GO:0033036 GO:0033043 GO:0034613 GO:0042886 GO:0043085 GO:0043087 GO:0043226 GO:0043227 GO:0043229 GO:0043547 GO:0044093 GO:0044422 GO:0044424 GO:0044433 GO:0044444 GO:0044446 GO:0044464 GO:0045184 GO:0046907 GO:0050789 GO:0050790 GO:0050794 GO:0051020 GO:0051049 GO:0051128 GO:0051179 GO:0051234 GO:0051336 GO:0051345 GO:0051641 GO:0051649 GO:0060589 GO:0060627 GO:0065007 GO:0065009 GO:0070727 GO:0071702 GO:0071705 GO:0090630 GO:0097708 GO:0098772

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

RabGAP-TBC

Protein Analysis

696

Amino Acids

78.12

Weight (kDa)

5.54

Isoelectric Point (pI)

53.52

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0002463)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT2G43490 AT2G43490 AT2G43490 AT2G43490 AT2G43490 AT2G43490 AT2G43490 AT2G43490
malus_domestica	MD04G1046500.v1.1
prunus_persica	Prupe.1G200000_v2.0.a1 Prupe.1G200000_v2.0.a1 Prupe.1G200000_v2.0.a1 Prupe.1G200000_v2.0.a1 Prupe.1G200000_v2.0.a1 Prupe.1G200000_v2.0.a1 Prupe.1G200000_v2.0.a1 Prupe.1G200000_v2.0.a1 Prupe.1G200000_v2.0.a1 Prupe.1G200000_v2.0.a1 Prupe.1G200000_v2.0.a1 Prupe.1G200000_v2.0.a1 Prupe.1G200000_v2.0.a1 Prupe.1G200000_v2.0.a1 Prupe.1G200000_v2.0.a1 Prupe.1G200000_v2.0.a1 Prupe.1G200000_v2.0.a1 Prupe.1G200000_v2.0.a1 Prupe.1G200000_v2.0.a1 Prupe.1G200000_v2.0.a1 Prupe.1G200000_v2.0.a1 Prupe.1G200000_v2.0.a1 Prupe.1G200000_v2.0.a1 Prupe.1G200000_v2.0.a1 Prupe.1G200000_v2.0.a1 Prupe.1G200000_v2.0.a1 Prupe.1G200000_v2.0.a1 Prupe.1G200000_v2.0.a1 Prupe.1G200000_v2.0.a1 Prupe.1G200000_v2.0.a1
pyrus_communis	pycom04g04040 pycom13g26960

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	137
AccB1I	GGYRCC	2 cut(s)	50, 448
AccBSI	CCGCTC	2 cut(s)	1710, 2010
AccI	GTMKAC	1 cut(s)	897
AccII	CGCG	2 cut(s)	1932, 1939
AccIII	TCCGGA	1 cut(s)	1503
AciI	CCGC	8 cut(s)	54, 322, 331, 1578, 1710, 1791, 2008, 2015
AclI	AACGTT	1 cut(s)	349
AclWI	GGATC	6 cut(s)	242, 376, 1247, 1260, 1720, 1780
AcsI	RAATTY	7 cut(s)	199, 275, 1070, 1187, 1207, 1372, 1804
AcuI	CTGAAG	3 cut(s)	330, 654, 1680
AfaI	GTAC	5 cut(s)	556, 667, 732, 1059, 1641
AfiI	CCNNNNNNNGG	4 cut(s)	701, 991, 1262, 2014
AflII	CTTAAG	1 cut(s)	155
AflIII	ACRYGT	2 cut(s)	727, 1937
AgeI	ACCGGT	1 cut(s)	1879
AhdI	GACNNNNNGTC	2 cut(s)	266, 1291
AjnI	CCWGG	1 cut(s)	848
AjuI	GAANNNNNNNTTGG	2 cut(s)	267, 299
AleI	CACNNNNGTG	1 cut(s)	1476
AluBI	AGCT	9 cut(s)	479, 690, 700, 1003, 1214, 1259, 2023, 2047, 2072
AluI	AGCT	9 cut(s)	479, 690, 700, 1003, 1214, 1259, 2023, 2047, 2072
Alw21I	GWGCWC	2 cut(s)	629, 819
Alw26I	GTCTC	5 cut(s)	321, 1095, 1299, 1852, 1928
Alw44I	GTGCAC	1 cut(s)	815
AlwI	GGATC	6 cut(s)	242, 376, 1247, 1260, 1720, 1780
Aor13HI	TCCGGA	1 cut(s)	1503
AoxI	GGCC	2 cut(s)	674, 1575
ApaLI	GTGCAC	1 cut(s)	815
ApeKI	GCWGC	5 cut(s)	687, 1000, 1510, 1895, 2069
ApoI	RAATTY	7 cut(s)	199, 275, 1070, 1187, 1207, 1372, 1804
AseI	ATTAAT	2 cut(s)	60, 227
AsiGI	ACCGGT	1 cut(s)	1879
Asp700I	GAANNNNTTC	2 cut(s)	403, 2036
AspS9I	GGNCC	4 cut(s)	426, 674, 1388, 1575
AsuC2I	CCSGG	1 cut(s)	340
AsuHPI	GGTGA	4 cut(s)	26, 111, 915, 1006
AvaII	GGWCC	2 cut(s)	426, 1388
BaeGI	GKGCMC	2 cut(s)	451, 819
BamHI	GGATCC	1 cut(s)	1252
BanI	GGYRCC	2 cut(s)	50, 448
BarI	GAAGNNNNNNTAC	2 cut(s)	1629, 1661
BbsI	GAAGAC	2 cut(s)	1119, 1876
Bbv12I	GWGCWC	2 cut(s)	629, 819
BbvI	GCAGC	5 cut(s)	699, 1012, 1497, 1907, 2081
BccI	CCATC	5 cut(s)	185, 259, 461, 934, 993
BciT130I	CCWGG	1 cut(s)	850
BcnI	CCSGG	1 cut(s)	340
BcoDI	GTCTC	5 cut(s)	321, 1095, 1299, 1852, 1928
BfaI	CTAG	5 cut(s)	591, 701, 1215, 1736, 2086
BfmI	CTRYAG	2 cut(s)	685, 2067
BfrI	CTTAAG	1 cut(s)	155
BisI	GCNGC	8 cut(s)	54, 323, 688, 1001, 1511, 1578, 1896, 2070
BlpI	GCTNAGC	1 cut(s)	2011
BlsI	GCNGC	8 cut(s)	55, 324, 689, 1002, 1512, 1579, 1897, 2071
Bme1390I	CCNGG	2 cut(s)	340, 850
Bme18I	GGWCC	2 cut(s)	426, 1388
BmeRI	GACNNNNNGTC	2 cut(s)	266, 1291
BmgT120I	GGNCC	4 cut(s)	426, 674, 1388, 1575
BmiI	GGNNCC	4 cut(s)	52, 427, 450, 1254
BmrFI	CCNGG	2 cut(s)	340, 850
BmrI	ACTGGG	1 cut(s)	1404
BmuI	ACTGGG	1 cut(s)	1404
BoxI	GACNNNNGTC	1 cut(s)	1620
BpiI	GAAGAC	2 cut(s)	1119, 1876
Bpu1102I	GCTNAGC	1 cut(s)	2011
BpuEI	CTTGAG	1 cut(s)	1077
BpuMI	CCSGG	1 cut(s)	340
BsaAI	YACGTR	1 cut(s)	665
BsaBI	GATNNNNATC	3 cut(s)	984, 1179, 1832
BsaI	GGTCTC	1 cut(s)	1852
BsaJI	CCNNGG	3 cut(s)	429, 1596, 1632
BsaWI	WCCGGW	3 cut(s)	1503, 1824, 1879
BsaXI	ACNNNNNCTCC	8 cut(s)	334, 364, 674, 704, 1089, 1119, 1556, 1586
Bsc4I	CCNNNNNNNGG	4 cut(s)	701, 991, 1262, 2014
Bse118I	RCCGGY	1 cut(s)	1879
Bse1I	ACTGG	3 cut(s)	406, 1399, 1762
Bse3DI	GCAATG	1 cut(s)	35
Bse8I	GATNNNNATC	3 cut(s)	984, 1179, 1832
BseAI	TCCGGA	1 cut(s)	1503
BseBI	CCWGG	1 cut(s)	850
BseDI	CCNNGG	3 cut(s)	429, 1596, 1632
BseJI	GATNNNNATC	3 cut(s)	984, 1179, 1832
BseLI	CCNNNNNNNGG	4 cut(s)	701, 991, 1262, 2014
BseMI	GCAATG	1 cut(s)	35
BseMII	CTCAG	4 cut(s)	128, 608, 1677, 2025
BseNI	ACTGG	3 cut(s)	406, 1399, 1762
BseRI	GAGGAG	1 cut(s)	476
BseSI	GKGCMC	2 cut(s)	451, 819
BseXI	GCAGC	5 cut(s)	699, 1012, 1497, 1907, 2081
Bsh1236I	CGCG	2 cut(s)	1932, 1939
BshFI	GGCC	2 cut(s)	676, 1577
BshNI	GGYRCC	2 cut(s)	50, 448
BshTI	ACCGGT	1 cut(s)	1879
BsiHKAI	GWGCWC	2 cut(s)	629, 819
BsiSI	CCGG	5 cut(s)	161, 340, 1504, 1825, 1880
BslI	CCNNNNNNNGG	4 cut(s)	701, 991, 1262, 2014
BsmAI	GTCTC	5 cut(s)	321, 1095, 1299, 1852, 1928
BsmBI	CGTCTC	1 cut(s)	1928
BsmI	GAATGC	3 cut(s)	1368, 1499, 1745
BsnI	GGCC	2 cut(s)	676, 1577
Bso31I	GGTCTC	1 cut(s)	1852
Bsp1286I	GDGCHC	3 cut(s)	451, 629, 819
Bsp13I	TCCGGA	1 cut(s)	1503
Bsp1407I	TGTACA	1 cut(s)	554
Bsp143I	GATC	5 cut(s)	247, 381, 1252, 1712, 1772
Bsp1720I	GCTNAGC	1 cut(s)	2011
Bsp68I	TCGCGA	1 cut(s)	1932
BspACI	CCGC	8 cut(s)	54, 322, 331, 1578, 1710, 1791, 2008, 2015
BspANI	GGCC	2 cut(s)	676, 1577
BspCNI	CTCAG	4 cut(s)	127, 609, 1678, 2024
BspEI	TCCGGA	1 cut(s)	1503
BspFNI	CGCG	2 cut(s)	1932, 1939
BspHI	TCATGA	1 cut(s)	1908
BspLI	GGNNCC	4 cut(s)	52, 427, 450, 1254
BspMAI	CTGCAG	2 cut(s)	689, 2071
BspPI	GGATC	6 cut(s)	242, 376, 1247, 1260, 1720, 1780
BspT107I	GGYRCC	2 cut(s)	50, 448
BspTI	CTTAAG	1 cut(s)	155
BspTNI	GGTCTC	1 cut(s)	1852
BsrBI	CCGCTC	2 cut(s)	1710, 2010
BsrDI	GCAATG	1 cut(s)	35
BsrFI	RCCGGY	1 cut(s)	1879
BsrGI	TGTACA	1 cut(s)	554
BsrI	ACTGG	3 cut(s)	406, 1399, 1762
BssAI	RCCGGY	1 cut(s)	1879
BssECI	CCNNGG	3 cut(s)	429, 1596, 1632
BssMI	GATC	5 cut(s)	247, 381, 1252, 1712, 1772
BssT1I	CCWWGG	3 cut(s)	429, 1596, 1632
Bst2UI	CCWGG	1 cut(s)	850
Bst4CI	ACNGT	6 cut(s)	142, 356, 453, 875, 1622, 1916
Bst6I	CTCTTC	2 cut(s)	12, 306
BstAFI	CTTAAG	1 cut(s)	155
BstAUI	TGTACA	1 cut(s)	554
BstBAI	YACGTR	1 cut(s)	665
BstC8I	GCNNGC	4 cut(s)	174, 574, 869, 1490
BstDEI	CTNAG	6 cut(s)	114, 617, 901, 1355, 1686, 2011
BstFNI	CGCG	2 cut(s)	1932, 1939
BstKTI	GATC	5 cut(s)	250, 384, 1255, 1715, 1775
BstMAI	GTCTC	5 cut(s)	321, 1095, 1299, 1852, 1928
BstMBI	GATC	5 cut(s)	247, 381, 1252, 1712, 1772
BstMWI	GCNNNNNNNGC	3 cut(s)	105, 328, 1241
BstNI	CCWGG	1 cut(s)	850
BstNSI	RCATGY	3 cut(s)	576, 731, 871
BstPAI	GACNNNNGTC	1 cut(s)	1620
BstSCI	CCNGG	2 cut(s)	338, 848
BstSFI	CTRYAG	2 cut(s)	685, 2067
BstSLI	GKGCMC	2 cut(s)	451, 819
BstSNI	TACGTA	1 cut(s)	665
BstUI	CGCG	2 cut(s)	1932, 1939
BstV1I	GCAGC	5 cut(s)	699, 1012, 1497, 1907, 2081
BstV2I	GAAGAC	2 cut(s)	1119, 1876
BstX2I	RGATCY	1 cut(s)	1252
BstXI	CCANNNNNNTGG	2 cut(s)	270, 436
BstYI	RGATCY	1 cut(s)	1252
BsuRI	GGCC	2 cut(s)	676, 1577
BtgZI	GCGATG	1 cut(s)	204
BtsI	GCAGTG	1 cut(s)	377
BtsIMutI	CAGTG	4 cut(s)	306, 361, 377, 1755
BtuMI	TCGCGA	1 cut(s)	1932
Cac8I	GCNNGC	4 cut(s)	174, 574, 869, 1490
CciI	TCATGA	1 cut(s)	1908
Cfr10I	RCCGGY	1 cut(s)	1879
Cfr13I	GGNCC	4 cut(s)	426, 674, 1388, 1575
CseI	GACGC	2 cut(s)	1006, 1945
Csp6I	GTAC	5 cut(s)	555, 666, 731, 1058, 1640
CspAI	ACCGGT	1 cut(s)	1879
CspCI	CAANNNNNGTGG	4 cut(s)	13, 48, 1403, 1438
CviAII	CATG	9 cut(s)	105, 573, 680, 728, 868, 942, 1087, 1245, 1909
CviQI	GTAC	5 cut(s)	555, 666, 731, 1058, 1640
DdeI	CTNAG	6 cut(s)	114, 617, 901, 1355, 1686, 2011
DpnI	GATC	5 cut(s)	249, 383, 1254, 1714, 1774
DpnII	GATC	5 cut(s)	247, 381, 1252, 1712, 1772
DriI	GACNNNNNGTC	2 cut(s)	266, 1291
Eam1104I	CTCTTC	2 cut(s)	12, 306
Eam1105I	GACNNNNNGTC	2 cut(s)	266, 1291
EarI	CTCTTC	2 cut(s)	12, 306
Eco105I	TACGTA	1 cut(s)	665
Eco130I	CCWWGG	3 cut(s)	429, 1596, 1632
Eco31I	GGTCTC	1 cut(s)	1852
Eco47I	GGWCC	2 cut(s)	426, 1388
Eco57I	CTGAAG	3 cut(s)	330, 654, 1680
EcoRI	GAATTC	1 cut(s)	1187
EcoRII	CCWGG	1 cut(s)	848
EcoT14I	CCWWGG	3 cut(s)	429, 1596, 1632
EcoT22I	ATGCAT	4 cut(s)	574, 1246, 1333, 2006
ErhI	CCWWGG	3 cut(s)	429, 1596, 1632
Esp3I	CGTCTC	1 cut(s)	1928
FaeI	CATG	9 cut(s)	108, 576, 683, 731, 871, 945, 1090, 1248, 1912
FatI	CATG	9 cut(s)	104, 572, 679, 727, 867, 941, 1086, 1244, 1908
FauI	CCCGC	1 cut(s)	1784
FauNDI	CATATG	2 cut(s)	568, 643
FblI	GTMKAC	1 cut(s)	897
Fnu4HI	GCNGC	8 cut(s)	54, 323, 688, 1001, 1511, 1578, 1896, 2070
Fsp4HI	GCNGC	8 cut(s)	54, 323, 688, 1001, 1511, 1578, 1896, 2070
FspBI	CTAG	5 cut(s)	591, 701, 1215, 1736, 2086
GluI	GCNGC	8 cut(s)	54, 323, 688, 1001, 1511, 1578, 1896, 2070
HaeIII	GGCC	2 cut(s)	676, 1577
HapII	CCGG	5 cut(s)	161, 340, 1504, 1825, 1880
HgaI	GACGC	2 cut(s)	1006, 1945
Hin1II	CATG	9 cut(s)	108, 576, 683, 731, 871, 945, 1090, 1248, 1912
HincII	GTYRAC	2 cut(s)	604, 1797
HindII	GTYRAC	2 cut(s)	604, 1797
HindIII	AAGCTT	2 cut(s)	2021, 2045
HinfI	GANTC	7 cut(s)	314, 596, 647, 911, 1138, 1592, 1655
HpaII	CCGG	5 cut(s)	161, 340, 1504, 1825, 1880
HphI	GGTGA	4 cut(s)	26, 111, 915, 1006
Hpy166II	GTNNAC	7 cut(s)	145, 407, 604, 817, 898, 1036, 1797
Hpy8I	GTNNAC	7 cut(s)	145, 407, 604, 817, 898, 1036, 1797
Hpy99I	CGWCG	1 cut(s)	1530
HpyAV	CCTTC	3 cut(s)	208, 800, 1379
HpyCH4III	ACNGT	6 cut(s)	142, 356, 453, 875, 1622, 1916
HpyCH4IV	ACGT	2 cut(s)	349, 664
HpyF10VI	GCNNNNNNNGC	3 cut(s)	105, 328, 1241
HpyF3I	CTNAG	6 cut(s)	114, 617, 901, 1355, 1686, 2011
HpySE526I	ACGT	2 cut(s)	349, 664
Hsp92II	CATG	9 cut(s)	108, 576, 683, 731, 871, 945, 1090, 1248, 1912
Kpn2I	TCCGGA	1 cut(s)	1503
Kzo9I	GATC	5 cut(s)	247, 381, 1252, 1712, 1772
LmnI	GCTCC	3 cut(s)	695, 705, 1748
Lsp1109I	GCAGC	5 cut(s)	699, 1012, 1497, 1907, 2081
MaeI	CTAG	5 cut(s)	591, 701, 1215, 1736, 2086
MaeII	ACGT	2 cut(s)	349, 664
MaeIII	GTNAC	8 cut(s)	117, 350, 356, 994, 1016, 1283, 1467, 2081
MalI	GATC	5 cut(s)	249, 383, 1254, 1714, 1774
MbiI	CCGCTC	2 cut(s)	1710, 2010
MboI	GATC	5 cut(s)	247, 381, 1252, 1712, 1772
MfeI	CAATTG	2 cut(s)	81, 1944
MflI	RGATCY	1 cut(s)	1252
MhlI	GDGCHC	3 cut(s)	451, 629, 819
MluI	ACGCGT	1 cut(s)	1937
MlyI	GAGTC	2 cut(s)	323, 1132
Mph1103I	ATGCAT	4 cut(s)	574, 1246, 1333, 2006
MroI	TCCGGA	1 cut(s)	1503
MroXI	GAANNNNTTC	2 cut(s)	403, 2036
MseI	TTAA	6 cut(s)	60, 156, 227, 366, 951, 1542
MslI	CAYNNNNRTG	4 cut(s)	571, 1336, 1476, 1760
MspA1I	CMGCKG	3 cut(s)	1003, 1580, 2015
MspCI	CTTAAG	1 cut(s)	155
MspI	CCGG	5 cut(s)	161, 340, 1504, 1825, 1880
MspR9I	CCNGG	2 cut(s)	340, 850
MunI	CAATTG	2 cut(s)	81, 1944
Mva1269I	GAATGC	3 cut(s)	1368, 1499, 1745
MvaI	CCWGG	1 cut(s)	850
MvnI	CGCG	2 cut(s)	1932, 1939
MwoI	GCNNNNNNNGC	3 cut(s)	105, 328, 1241
NciI	CCSGG	1 cut(s)	340
NdeI	CATATG	2 cut(s)	568, 643
NdeII	GATC	5 cut(s)	247, 381, 1252, 1712, 1772
NlaIII	CATG	9 cut(s)	108, 576, 683, 731, 871, 945, 1090, 1248, 1912
NlaIV	GGNNCC	4 cut(s)	52, 427, 450, 1254
NmeAIII	GCCGAG	1 cut(s)	298
NmuCI	GTSAC	6 cut(s)	117, 356, 994, 1283, 1467, 2081
NruI	TCGCGA	1 cut(s)	1932
NsiI	ATGCAT	4 cut(s)	574, 1246, 1333, 2006
NspI	RCATGY	3 cut(s)	576, 731, 871
OliI	CACNNNNGTG	1 cut(s)	1476
PaeI	GCATGC	2 cut(s)	576, 871
PagI	TCATGA	1 cut(s)	1908
PciI	ACATGT	1 cut(s)	727
PcsI	WCGNNNNNNNCGW	1 cut(s)	1936
PctI	GAATGC	3 cut(s)	1368, 1499, 1745
PdmI	GAANNNNTTC	2 cut(s)	403, 2036
PfeI	GAWTC	5 cut(s)	596, 647, 911, 1592, 1655
PflFI	GACNNNGTC	1 cut(s)	608
PinAI	ACCGGT	1 cut(s)	1879
PkrI	GCNGC	8 cut(s)	55, 324, 689, 1002, 1512, 1579, 1897, 2071
PleI	GAGTC	2 cut(s)	322, 1132
PpsI	GAGTC	2 cut(s)	322, 1132
Ppu21I	YACGTR	1 cut(s)	665
PscI	ACATGT	1 cut(s)	727
PshAI	GACNNNNGTC	1 cut(s)	1620
PshBI	ATTAAT	2 cut(s)	60, 227
PsiI	TTATAA	1 cut(s)	137
Psp1406I	AACGTT	1 cut(s)	349
Psp6I	CCWGG	1 cut(s)	848
PspGI	CCWGG	1 cut(s)	848
PspN4I	GGNNCC	4 cut(s)	52, 427, 450, 1254
PspPI	GGNCC	4 cut(s)	426, 674, 1388, 1575
PstI	CTGCAG	2 cut(s)	689, 2071
PsuI	RGATCY	1 cut(s)	1252
PsyI	GACNNNGTC	1 cut(s)	608
PvuII	CAGCTG	1 cut(s)	1003
RruI	TCGCGA	1 cut(s)	1932
RsaI	GTAC	5 cut(s)	556, 667, 732, 1059, 1641
RsaNI	GTAC	5 cut(s)	555, 666, 731, 1058, 1640
RseI	CAYNNNNRTG	4 cut(s)	571, 1336, 1476, 1760
SaqAI	TTAA	6 cut(s)	60, 156, 227, 366, 951, 1542
SatI	GCNGC	8 cut(s)	54, 323, 688, 1001, 1511, 1578, 1896, 2070
Sau3AI	GATC	5 cut(s)	247, 381, 1252, 1712, 1772
Sau96I	GGNCC	4 cut(s)	426, 674, 1388, 1575
SchI	GAGTC	2 cut(s)	323, 1132
ScrFI	CCNGG	2 cut(s)	340, 850
SduI	GDGCHC	3 cut(s)	451, 629, 819
SfcI	CTRYAG	2 cut(s)	685, 2067
SinI	GGWCC	2 cut(s)	426, 1388
SmiMI	CAYNNNNRTG	4 cut(s)	571, 1336, 1476, 1760
SmlI	CTYRAG	2 cut(s)	155, 1092
SmoI	CTYRAG	2 cut(s)	155, 1092
SnaBI	TACGTA	1 cut(s)	665
SphI	GCATGC	2 cut(s)	576, 871
SsiI	CCGC	8 cut(s)	54, 322, 331, 1578, 1710, 1791, 2008, 2015
SspI	AATATT	1 cut(s)	2036
SspMI	CTAG	5 cut(s)	591, 701, 1215, 1736, 2086
StyD4I	CCNGG	2 cut(s)	338, 848
StyI	CCWWGG	3 cut(s)	429, 1596, 1632
TaaI	ACNGT	6 cut(s)	142, 356, 453, 875, 1622, 1916
TaiI	ACGT	2 cut(s)	352, 667
TaqI	TCGA	2 cut(s)	246, 854
TaqII	GACCGA	1 cut(s)	1405
TatI	WGTACW	2 cut(s)	554, 1639
TauI	GCSGC	3 cut(s)	56, 325, 1580
TfiI	GAWTC	5 cut(s)	596, 647, 911, 1592, 1655
Tru1I	TTAA	6 cut(s)	60, 156, 227, 366, 951, 1542
Tru9I	TTAA	6 cut(s)	60, 156, 227, 366, 951, 1542
TscAI	CASTG	4 cut(s)	313, 361, 377, 1762
TseFI	GTSAC	6 cut(s)	117, 356, 994, 1283, 1467, 2081
TseI	GCWGC	5 cut(s)	687, 1000, 1510, 1895, 2069
Tsp45I	GTSAC	6 cut(s)	117, 356, 994, 1283, 1467, 2081
TspDTI	ATGAA	8 cut(s)	649, 732, 930, 1125, 1418, 1778, 1887, 1925
TspGWI	ACGGA	1 cut(s)	1735
TspRI	CASTG	4 cut(s)	313, 361, 377, 1762
Tth111I	GACNNNGTC	1 cut(s)	608
Vha464I	CTTAAG	1 cut(s)	155
VneI	GTGCAC	1 cut(s)	815
VpaK11BI	GGWCC	2 cut(s)	426, 1388
VspI	ATTAAT	2 cut(s)	60, 227
XapI	RAATTY	7 cut(s)	199, 275, 1070, 1187, 1207, 1372, 1804
XbaI	TCTAGA	1 cut(s)	1735
XceI	RCATGY	3 cut(s)	576, 731, 871
XcmI	CCANNNNNNNNNTGG	1 cut(s)	392
XmiI	GTMKAC	1 cut(s)	897
XmnI	GAANNNNTTC	2 cut(s)	403, 2036
XspI	CTAG	5 cut(s)	591, 701, 1215, 1736, 2086
Zsp2I	ATGCAT	4 cut(s)	574, 1246, 1333, 2006

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.