AT2G43770

U5 small nuclear ribonucleoprotein 40 kDa

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
arabidopsis_thaliana
2
OG0012055
Physical Location & Seq
Reverse (-)
18134061 .. 18136036
1976 bp
Loading structure...
UTR
Exon/CDS
Intron
AT2G43770.1

Sequence Viewer

Length: 1032 bp
ATGGAAATCATGTCAAGAGAGAATGAGACTGCTTTGTCAGGTCCTAGGCCGATGGAATGGTCTACCGTCCCACACAGTGCTTCTCAAGGACCTGGTCCCAATGGCAAGAACCGGACCTCGAGCTTGGAAGCACCTATCATGTTGCTAAGTGGACATCCGAGTGCTGTCTATACCATGAAGTTCAATCCTGCTGGAACTCTGATTGCATCTGGATCCCATGACAGAGAAATCTTCCTCTGGAGAGTTCACGGGGACTGCAAAAACTTCATGGTTTTGAAAGGTCACAAGAACGCCATCCTTGATCTTCATTGGACCAGTGATGGCTCCCAGATTGTATCAGCTAGTCCGGATAAAACTGTAAGGGCTTGGGATGTTGAGACTGGGAAACAAATCAAGAAGATGGCTGAACATTCATCGTTTGTGAATTCTTGCTGTCCTACACGTAGAGGGCCACCTCTTATCATCAGTGGATCTGATGATGGAACTGCCAAGCTTTGGGACATGCGTCAAAGAGGAGCCATACAAACATTTCCTGATAAATACCAAATCACTGCAGTCAGTTTCTCAGATGCAGCTGATAAGATTTTCACTGGTGGTGTAGACAATGATGTTAAGGTTTGGGACTTGAGAAAAGGTGAAGCCACCATGACACTTGAGGGCCATCAAGATACAATCACAGGTATGAGCTTAAGCCCAGACGGTTCCTACCTTCTCACTAATGGAATGGACAACAAGCTCTGTGTGTGGGACATGCGTCCTTATGCTCCACAAAACCGATGTGTAAAGATCTTTGAGGGGCATCAACACAACTTTGAGAAGAACCTGCTGAAATGTTCATGGTCACCTGATGGTACAAAAGTTACTGCCGGTAGCTCAGACCGTATGGTTCATATCTGGGACACAACCAGTCGGCGCACTATATATAAGCTCCCAGGCCATACCGGTTCTGTCAATGAGTGTGTTTTCCACCCAACCGAGCCTATCATTGGATCTTGCAGTAGTGATAAAAATATCTACTTGGGAGAGATCTGA

Protein Analysis

343

Amino Acids

37.89

Weight (kDa)

6.89

Isoelectric Point (pI)

31.46

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Beta-prop_Aladin PF25460 38 - 151 1.3e-07 Aladin seven-bladed propeller
WD40 PF00400 45 - 80 9e-08 WD domain, G-beta repeat
EIF3I PF24805 45 - 139 2.5e-13 EIF3I
Beta-prop_TEP1_2nd PF25047 45 - 144 5e-14 TEP-1 second beta-propeller
Beta-prop_WDR3_1st PF25173 46 - 168 7.4e-28 WDR3 first beta-propeller domain
Beta-prop_WDR3_2nd PF25172 48 - 168 2.1e-14 WDR3 second beta-propeller domain
WD40_Prp19 PF24814 48 - 222 4.5e-27 Prp19 WD40 domain
Beta-prop_WDR5 PF25175 49 - 338 4e-65 WDR5 beta-propeller domain
Beta-prop_CAF1B_HIR1 PF24105 49 - 171 2e-15 CAF1B/HIR1 beta-propeller domain
WD40_CDC20-Fz PF24807 50 - 249 2.4e-29 CDC20/Fizzy WD40 domain
Beta-prop_EML PF23409 51 - 145 1.7e-06 Echinoderm microtubule-associated protein first beta-propeller
Beta-prop_THOC3 PF25174 52 - 269 1.3e-42 THOC3 beta-propeller domain
Beta-prop_EML_2 PF23414 53 - 136 1.3e-14 Echinoderm microtubule-associated protein second beta-propeller
Beta-prop_SPT8 PF23798 54 - 339 2e-10 SPT8 beta propeller
WD40_WDHD1_1st PF24817 54 - 135 9.4e-12 WDHD1 first WD40 domain
WDR55 PF24796 54 - 179 3.9e-19 WDR55
WD40_Gbeta PF25391 54 - 211 1.4e-16 G protein beta WD-40 repeat protein
WD40_MABP1-WDR62_2nd PF24782 55 - 166 2.5e-06 MABP1/WDR62 second WD40 domain
Beta-prop_WDR36-Utp21_2nd PF25168 55 - 134 5.4e-08 WDR36/Utp21 second beta-propeller domain
ANAPC4_WD40 PF12894 59 - 139 2.5e-07 Anaphase-promoting complex subunit 4 WD40 domain
Beta-prop_WDR41 PF25178 68 - 143 4e-07 WDR41
WD40_MABP1-WDR62_1st PF24780 87 - 213 2.3e-07 MABP1/WDR62 first WD40 domain
WD40 PF00400 90 - 124 1.9e-07 WD domain, G-beta repeat
WD40 PF00400 128 - 167 6.2e-06 WD domain, G-beta repeat
Beta-prop_TEP1_2nd PF25047 137 - 215 4.9e-07 TEP-1 second beta-propeller
Beta-prop_EML_2 PF23414 152 - 261 3.1e-11 Echinoderm microtubule-associated protein second beta-propeller
Beta-prop_WDR3_2nd PF25172 153 - 250 2.1e-13 WDR3 second beta-propeller domain
Beta-prop_WDR36-Utp21_2nd PF25168 153 - 252 1e-09 WDR36/Utp21 second beta-propeller domain
Beta-prop_WDR3_1st PF25173 154 - 269 2.1e-20 WDR3 first beta-propeller domain
Beta-prop_WDR36-Utp21_1st PF25171 157 - 249 6.2e-10 WDR36/Utp21 first beta-propeller
Beta-prop_WDR90_POC16_2nd PF23393 158 - 251 2.5e-07 WDR90/POC16, second beta-propeller
Beta-prop_DCAF4 PF23761 172 - 312 1.1e-06 DDB1- and CUL4-associated factor 4 beta-propeller domain
Beta-prop_EML PF23409 180 - 338 3.4e-09 Echinoderm microtubule-associated protein first beta-propeller
WD40_WDHD1_1st PF24817 182 - 283 9.7e-14 WDHD1 first WD40 domain
Beta-prop_CAF1B_HIR1 PF24105 183 - 262 3.1e-09 CAF1B/HIR1 beta-propeller domain
WD40_Gbeta PF25391 193 - 270 1.1e-06 G protein beta WD-40 repeat protein
WDR55 PF24796 194 - 338 5.2e-14 WDR55
EIF3I PF24805 195 - 340 4.6e-09 EIF3I
WD40_Prp19 PF24814 197 - 252 2.8e-10 Prp19 WD40 domain
WD40 PF00400 214 - 250 8.5e-09 WD domain, G-beta repeat
Beta-prop_TEP1_2nd PF25047 216 - 320 1.8e-12 TEP-1 second beta-propeller
Beta-prop_Aladin PF25460 221 - 329 7.2e-07 Aladin seven-bladed propeller
WD40_Prp19 PF24814 224 - 340 2.8e-14 Prp19 WD40 domain
Beta-prop_EML_2 PF23414 239 - 340 9.9e-07 Echinoderm microtubule-associated protein second beta-propeller
Beta-prop_WDR3_1st PF25173 258 - 338 1.2e-12 WDR3 first beta-propeller domain
WD40 PF00400 259 - 300 3.5e-07 WD domain, G-beta repeat
Beta-prop_CAF1B_HIR1 PF24105 260 - 338 5.4e-07 CAF1B/HIR1 beta-propeller domain
WD40_WDHD1_1st PF24817 271 - 337 4.9e-06 WDHD1 first WD40 domain
WD40_CDC20-Fz PF24807 272 - 338 4.7e-06 CDC20/Fizzy WD40 domain
Beta-prop_THOC3 PF25174 275 - 339 8.9e-12 THOC3 beta-propeller domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Orthologous Genes (Group: OG0012055)

Species Orthologous Gene IDs
arabidopsis_thaliana AT2G43770
fragaria_vesca FvH4_4g10290 FvH4_4g10290 FvH4_4g10290 FvH4_4g10290 FvH4_4g10290
malus_domestica MD16G1243600.v1.1
prunus_persica Prupe.1G071000_v2.0.a1
pyrus_communis pycom16g20470
rosa_chinensis RchiOBHm_Chr4g0405641
rosa_laevigata RLG00000008830
rosa_multiflora Rmu_sc0001200.1_g000049
rosa_roxburghii Rroxscaffold_5G00350120
rosa_rugosa Rorug04G0061600
rosa_samantha Rh4AG133000 Rh4BG128000 Rh4CG140700 Rh4DG127400
rosa_wichuraiana Rw4G010780

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 1 cut(s) 34
Acc36I ACCTGC 1 cut(s) 831
AccB7I CCANNNNNTGG 1 cut(s) 495
AccI GTMKAC 2 cut(s) 62, 600
AccIII TCCGGA 1 cut(s) 346
AclWI GGATC 4 cut(s) 207, 220, 478, 997
AcsI RAATTY 1 cut(s) 424
AdeI CACNNNGTG 1 cut(s) 77
AfaI GTAC 1 cut(s) 853
AfiI CCNNNNNNNGG 2 cut(s) 495, 986
AflII CTTAAG 1 cut(s) 688
AflIII ACRYGT 1 cut(s) 440
AgeI ACCGGT 1 cut(s) 941
AgsI TTSAA 2 cut(s) 184, 277
AjnI CCWGG 2 cut(s) 91, 931
AluBI AGCT 8 cut(s) 123, 341, 493, 575, 687, 736, 873, 928
AluI AGCT 8 cut(s) 123, 341, 493, 575, 687, 736, 873, 928
Alw26I GTCTC 2 cut(s) 20, 371
AlwI GGATC 4 cut(s) 207, 220, 478, 997
Ama87I CYCGRG 1 cut(s) 118
Aor13HI TCCGGA 1 cut(s) 346
AoxI GGCC 4 cut(s) 47, 449, 658, 934
ApeKI GCWGC 1 cut(s) 572
ApoI RAATTY 1 cut(s) 424
AsiGI ACCGGT 1 cut(s) 941
AspA2I CCTAGG 1 cut(s) 44
AspLEI GCGC 1 cut(s) 915
AspS9I GGNCC 7 cut(s) 41, 89, 95, 114, 312, 449, 658
AsuHPI GGTGA 2 cut(s) 647, 834
AvaI CYCGRG 1 cut(s) 118
AvaII GGWCC 5 cut(s) 41, 89, 95, 114, 312
AvrII CCTAGG 1 cut(s) 44
BaeI ACNNNNGTAYC 2 cut(s) 843, 876
BamHI GGATCC 1 cut(s) 212
BbvI GCAGC 1 cut(s) 584
BccI CCATC 7 cut(s) 46, 302, 314, 394, 473, 669, 842
BciT130I CCWGG 2 cut(s) 93, 933
BcoDI GTCTC 2 cut(s) 20, 371
BfaI CTAG 2 cut(s) 45, 342
BfmI CTRYAG 1 cut(s) 552
BfrI CTTAAG 1 cut(s) 688
BfuAI ACCTGC 1 cut(s) 831
BglII AGATCT 2 cut(s) 786, 1026
BisI GCNGC 1 cut(s) 573
BlnI CCTAGG 1 cut(s) 44
BlsI GCNGC 1 cut(s) 574
Bme1390I CCNGG 2 cut(s) 93, 933
Bme18I GGWCC 5 cut(s) 41, 89, 95, 114, 312
BmeT110I CYCGRG 1 cut(s) 118
BmgT120I GGNCC 7 cut(s) 41, 89, 95, 114, 312, 449, 658
BmiI GGNNCC 5 cut(s) 97, 214, 325, 517, 703
BmrFI CCNGG 2 cut(s) 93, 933
BmrI ACTGGG 1 cut(s) 390
BmsI GCATC 3 cut(s) 215, 559, 808
BmuI ACTGGG 1 cut(s) 390
BoxI GACNNNNGTC 2 cut(s) 504, 753
BpmI CTGGAG 1 cut(s) 259
BpuEI CTTGAG 3 cut(s) 69, 646, 674
BsaAI YACGTR 1 cut(s) 443
BsaJI CCNNGG 2 cut(s) 44, 931
BsaWI WCCGGW 3 cut(s) 111, 346, 941
Bsc4I CCNNNNNNNGG 2 cut(s) 495, 986
Bse118I RCCGGY 2 cut(s) 866, 941
Bse1I ACTGG 4 cut(s) 315, 385, 595, 906
BseAI TCCGGA 1 cut(s) 346
BseBI CCWGG 2 cut(s) 93, 933
BseDI CCNNGG 2 cut(s) 44, 931
BseGI GGATG 3 cut(s) 154, 294, 376
BseLI CCNNNNNNNGG 2 cut(s) 495, 986
BseMII CTCAG 2 cut(s) 579, 888
BseNI ACTGG 4 cut(s) 315, 385, 595, 906
BseRI GAGGAG 1 cut(s) 528
BseXI GCAGC 1 cut(s) 584
BshFI GGCC 4 cut(s) 49, 451, 660, 936
BshTI ACCGGT 1 cut(s) 941
BsiHKCI CYCGRG 1 cut(s) 118
BsiSI CCGG 4 cut(s) 112, 347, 867, 942
BslFI GGGAC 7 cut(s) 53, 81, 266, 512, 635, 761, 911
BslI CCNNNNNNNGG 2 cut(s) 495, 986
BsmAI GTCTC 2 cut(s) 20, 371
BsmFI GGGAC 7 cut(s) 53, 81, 266, 512, 635, 761, 911
BsnI GGCC 4 cut(s) 49, 451, 660, 936
BsoBI CYCGRG 1 cut(s) 118
Bsp13I TCCGGA 1 cut(s) 346
Bsp143I GATC 6 cut(s) 212, 301, 470, 786, 989, 1026
BspANI GGCC 4 cut(s) 49, 451, 660, 936
BspCNI CTCAG 2 cut(s) 578, 887
BspEI TCCGGA 1 cut(s) 346
BspLI GGNNCC 5 cut(s) 97, 214, 325, 517, 703
BspMAI CTGCAG 1 cut(s) 556
BspMI ACCTGC 1 cut(s) 831
BspPI GGATC 4 cut(s) 207, 220, 478, 997
BspTI CTTAAG 1 cut(s) 688
BsrFI RCCGGY 2 cut(s) 866, 941
BsrI ACTGG 4 cut(s) 315, 385, 595, 906
BssAI RCCGGY 2 cut(s) 866, 941
BssECI CCNNGG 2 cut(s) 44, 931
BssMI GATC 6 cut(s) 212, 301, 470, 786, 989, 1026
BssT1I CCWWGG 1 cut(s) 44
Bst2UI CCWGG 2 cut(s) 93, 933
Bst4CI ACNGT 5 cut(s) 67, 77, 358, 701, 881
BstAFI CTTAAG 1 cut(s) 688
BstBAI YACGTR 1 cut(s) 443
BstDEI CTNAG 3 cut(s) 146, 565, 874
BstEII GGTNACC 1 cut(s) 840
BstF5I GGATG 3 cut(s) 154, 294, 376
BstHHI GCGC 1 cut(s) 915
BstKTI GATC 6 cut(s) 215, 304, 473, 789, 992, 1029
BstMAI GTCTC 2 cut(s) 20, 371
BstMBI GATC 6 cut(s) 212, 301, 470, 786, 989, 1026
BstNI CCWGG 2 cut(s) 93, 933
BstNSI RCATGY 2 cut(s) 505, 754
BstPAI GACNNNNGTC 2 cut(s) 504, 753
BstPI GGTNACC 1 cut(s) 840
BstSCI CCNGG 2 cut(s) 91, 931
BstSFI CTRYAG 1 cut(s) 552
BstV1I GCAGC 1 cut(s) 584
BstX2I RGATCY 5 cut(s) 212, 470, 786, 989, 1026
BstYI RGATCY 5 cut(s) 212, 470, 786, 989, 1026
BsuRI GGCC 4 cut(s) 49, 451, 660, 936
BtsCI GGATG 3 cut(s) 154, 294, 376
BtsI GCAGTG 1 cut(s) 549
BtsIMutI CAGTG 5 cut(s) 82, 322, 472, 549, 588
BveI ACCTGC 1 cut(s) 831
CfoI GCGC 1 cut(s) 915
Cfr10I RCCGGY 2 cut(s) 866, 941
Cfr13I GGNCC 7 cut(s) 41, 89, 95, 114, 312, 449, 658
CseI GACGC 2 cut(s) 494, 743
CsiI ACCWGGT 1 cut(s) 91
Csp6I GTAC 1 cut(s) 852
CspAI ACCGGT 1 cut(s) 941
CviAII CATG 9 cut(s) 10, 139, 175, 218, 268, 502, 646, 751, 837
CviQI GTAC 1 cut(s) 852
DdeI CTNAG 3 cut(s) 146, 565, 874
DpnI GATC 6 cut(s) 214, 303, 472, 788, 991, 1028
DpnII GATC 6 cut(s) 212, 301, 470, 786, 989, 1026
DraIII CACNNNGTG 1 cut(s) 77
DrdI GACNNNNNNGTC 1 cut(s) 34
DseDI GACNNNNNNGTC 1 cut(s) 34
Eco130I CCWWGG 1 cut(s) 44
Eco47I GGWCC 5 cut(s) 41, 89, 95, 114, 312
Eco88I CYCGRG 1 cut(s) 118
Eco91I GGTNACC 1 cut(s) 840
EcoO109I RGGNCCY 2 cut(s) 41, 89
EcoO65I GGTNACC 1 cut(s) 840
EcoRI GAATTC 1 cut(s) 424
EcoRII CCWGG 2 cut(s) 91, 931
EcoT14I CCWWGG 1 cut(s) 44
ErhI CCWWGG 1 cut(s) 44
FaeI CATG 9 cut(s) 13, 142, 178, 221, 271, 505, 649, 754, 840
FaqI GGGAC 7 cut(s) 53, 81, 266, 512, 635, 761, 911
FatI CATG 9 cut(s) 9, 138, 174, 217, 267, 501, 645, 750, 836
FblI GTMKAC 2 cut(s) 62, 600
Fnu4HI GCNGC 1 cut(s) 573
FokI GGATG 3 cut(s) 141, 281, 383
Fsp4HI GCNGC 1 cut(s) 573
FspBI CTAG 2 cut(s) 45, 342
GlaI GCGC 1 cut(s) 914
GluI GCNGC 1 cut(s) 573
GsuI CTGGAG 1 cut(s) 259
HaeIII GGCC 4 cut(s) 49, 451, 660, 936
HapII CCGG 4 cut(s) 112, 347, 867, 942
HgaI GACGC 2 cut(s) 494, 743
HhaI GCGC 1 cut(s) 915
Hin1II CATG 9 cut(s) 13, 142, 178, 221, 271, 505, 649, 754, 840
Hin6I GCGC 1 cut(s) 913
HinP1I GCGC 1 cut(s) 913
HindIII AAGCTT 1 cut(s) 491
HpaII CCGG 4 cut(s) 112, 347, 867, 942
HphI GGTGA 2 cut(s) 647, 834
Hpy166II GTNNAC 4 cut(s) 63, 152, 247, 601
Hpy188I TCNGA 6 cut(s) 159, 201, 475, 568, 877, 1031
Hpy188III TCNNGA 7 cut(s) 15, 210, 238, 347, 394, 533, 665
Hpy8I GTNNAC 4 cut(s) 63, 152, 247, 601
HpyAV CCTTC 1 cut(s) 719
HpyCH4III ACNGT 5 cut(s) 67, 77, 358, 701, 881
HpyCH4IV ACGT 1 cut(s) 442
HpyCH4V TGCA 5 cut(s) 206, 258, 554, 572, 996
HpyF3I CTNAG 3 cut(s) 146, 565, 874
HpySE526I ACGT 1 cut(s) 442
Hsp92II CATG 9 cut(s) 13, 142, 178, 221, 271, 505, 649, 754, 840
HspAI GCGC 1 cut(s) 913
Kpn2I TCCGGA 1 cut(s) 346
Kzo9I GATC 6 cut(s) 212, 301, 470, 786, 989, 1026
LmnI GCTCC 4 cut(s) 329, 515, 769, 933
Lsp1109I GCAGC 1 cut(s) 584
LweI GCATC 3 cut(s) 215, 559, 808
MabI ACCWGGT 1 cut(s) 91
MaeI CTAG 2 cut(s) 45, 342
MaeII ACGT 1 cut(s) 442
MaeIII GTNAC 3 cut(s) 281, 840, 859
MalI GATC 6 cut(s) 214, 303, 472, 788, 991, 1028
MboI GATC 6 cut(s) 212, 301, 470, 786, 989, 1026
MboII GAAGA 4 cut(s) 223, 296, 409, 829
MflI RGATCY 5 cut(s) 212, 470, 786, 989, 1026
MluCI AATT 1 cut(s) 424
MnlI CCTC 7 cut(s) 127, 245, 440, 465, 506, 649, 787
MroI TCCGGA 1 cut(s) 346
MseI TTAA 2 cut(s) 612, 689
MslI CAYNNNNRTG 2 cut(s) 159, 680
MspA1I CMGCKG 1 cut(s) 575
MspCI CTTAAG 1 cut(s) 688
MspI CCGG 4 cut(s) 112, 347, 867, 942
MspR9I CCNGG 2 cut(s) 93, 933
MvaI CCWGG 2 cut(s) 93, 933
NdeII GATC 6 cut(s) 212, 301, 470, 786, 989, 1026
NlaIII CATG 9 cut(s) 13, 142, 178, 221, 271, 505, 649, 754, 840
NlaIV GGNNCC 5 cut(s) 97, 214, 325, 517, 703
NmuCI GTSAC 2 cut(s) 281, 840
NspI RCATGY 2 cut(s) 505, 754
PaeR7I CTCGAG 1 cut(s) 118
PflFI GACNNNGTC 1 cut(s) 93
PflMI CCANNNNNTGG 1 cut(s) 495
PinAI ACCGGT 1 cut(s) 941
PkrI GCNGC 1 cut(s) 574
Ppu21I YACGTR 1 cut(s) 443
PpuMI RGGWCCY 2 cut(s) 41, 89
PshAI GACNNNNGTC 2 cut(s) 504, 753
Psp5II RGGWCCY 2 cut(s) 41, 89
Psp6I CCWGG 2 cut(s) 91, 931
PspEI GGTNACC 1 cut(s) 840
PspGI CCWGG 2 cut(s) 91, 931
PspN4I GGNNCC 5 cut(s) 97, 214, 325, 517, 703
PspPI GGNCC 7 cut(s) 41, 89, 95, 114, 312, 449, 658
PspPPI RGGWCCY 2 cut(s) 41, 89
PspXI VCTCGAGB 1 cut(s) 118
PstI CTGCAG 1 cut(s) 556
PsuI RGATCY 5 cut(s) 212, 470, 786, 989, 1026
PsyI GACNNNGTC 1 cut(s) 93
PvuII CAGCTG 1 cut(s) 575
RsaI GTAC 1 cut(s) 853
RsaNI GTAC 1 cut(s) 852
RseI CAYNNNNRTG 2 cut(s) 159, 680
SaqAI TTAA 2 cut(s) 612, 689
SatI GCNGC 1 cut(s) 573
Sau3AI GATC 6 cut(s) 212, 301, 470, 786, 989, 1026
Sau96I GGNCC 7 cut(s) 41, 89, 95, 114, 312, 449, 658
ScrFI CCNGG 2 cut(s) 93, 933
SexAI ACCWGGT 1 cut(s) 91
SfaNI GCATC 3 cut(s) 215, 559, 808
SfcI CTRYAG 1 cut(s) 552
Sfr274I CTCGAG 1 cut(s) 118
SinI GGWCC 5 cut(s) 41, 89, 95, 114, 312
SlaI CTCGAG 1 cut(s) 118
SmiMI CAYNNNNRTG 2 cut(s) 159, 680
SmlI CTYRAG 5 cut(s) 84, 118, 625, 653, 688
SmoI CTYRAG 5 cut(s) 84, 118, 625, 653, 688
Sse9I AATT 1 cut(s) 424
SspMI CTAG 2 cut(s) 45, 342
StyD4I CCNGG 2 cut(s) 91, 931
StyI CCWWGG 1 cut(s) 44
TaaI ACNGT 5 cut(s) 67, 77, 358, 701, 881
TaiI ACGT 1 cut(s) 445
TaqI TCGA 1 cut(s) 119
TasI AATT 1 cut(s) 424
Tru1I TTAA 2 cut(s) 612, 689
Tru9I TTAA 2 cut(s) 612, 689
TscAI CASTG 5 cut(s) 82, 322, 472, 556, 595
TseFI GTSAC 2 cut(s) 281, 840
TseI GCWGC 1 cut(s) 572
Tsp45I GTSAC 2 cut(s) 281, 840
TspDTI ATGAA 6 cut(s) 191, 256, 296, 402, 825, 878
TspRI CASTG 5 cut(s) 82, 322, 472, 556, 595
Tth111I GACNNNGTC 1 cut(s) 93
Van91I CCANNNNNTGG 1 cut(s) 495
Vha464I CTTAAG 1 cut(s) 688
VpaK11BI GGWCC 5 cut(s) 41, 89, 95, 114, 312
XapI RAATTY 1 cut(s) 424
XceI RCATGY 2 cut(s) 505, 754
XhoI CTCGAG 1 cut(s) 118
XmaJI CCTAGG 1 cut(s) 44
XmiI GTMKAC 2 cut(s) 62, 600
XspI CTAG 2 cut(s) 45, 342
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.