AT2G44690
ERF Family

Belongs to the small GTPase superfamily. Rho family

Basic Information

Type: gene
Biological Identity
arabidopsis_thaliana
2
Physical Location & Seq
Forward (+)
18429121 .. 18430882
1762 bp
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UTR
Exon/CDS
Intron
AT2G44690.1

Sequence Viewer

Length: 630 bp
ATGTCAGCTTCAATGGCTGCAACATCAACATCATCAGCAACAGCTACAACGTTTATAAAGTGTGTCACTGTTGGCGATGGAGCTGTGGGCAAAACTTGTCTTCTTATTTCCTACACCAGCAACACGTTCCCCACTGATTATGTTCCAACAGTGTTCGACAATTTCAATGCTAATGTTTTAGTCGATGGTAAAACTGTCAATCTGGGTCTCTGGGATACTGCTGGTCAAGAAGACTACAATAGGGTTAGACCATTGAGTTACAGAGGAGCAGATGTTTTCATTCTTGCCTTCTCACTTATTAGCAGGCCTAGCTTTGAGAACATTGCTAAAAAGTGGGTACCCGAGCTGAGACATTATGCCCCGACTGTGCCTATTGTTCTTGTGGGAACCAAATCAGATCTAAGAGACAACATGCAGTTCCCAAAGAATTATCCAGGTGCTTGCACAATCTTCCCAGAACAGGGTCAAGAACTAAGAAAGGAAATAGGAGCATTAGCATACATAGAGTGCAGCTCAAAAGCACAAATGAACGTAAAAGCCGTGTTTGATGAAGCGATCAAAGTAGTTTTACATCCTCCTTCAAAGACTAAGAAGCGAAAGAGAAAGATCGGTTTATGCCATGTTCTTTGA
Functional Annotation
Pfam Domains
Protein Families

Protein Analysis

209

Amino Acids

22.97

Weight (kDa)

9.18

Isoelectric Point (pI)

47.38

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Ras PF00071 20 - 189 2.3e-50 Ras family
Roc PF08477 20 - 133 1.1e-23 Ras of Complex, Roc, domain of DAPkinase
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0013805)

Species Orthologous Gene IDs
arabidopsis_thaliana AT2G44690
fragaria_vesca FvH4_7g09150 FvH4_7g09150 FvH4_7g09150
malus_domestica MD07G1096600.v1.1
prunus_persica Prupe.2G120300_v2.0.a1 Prupe.2G120300_v2.0.a1
pyrus_communis pycom02g18520 pycom07g07970
rosa_chinensis RchiOBHm_Chr1g0345191
rosa_laevigata RLG00000028848
rosa_multiflora Rmu_sc0011699.1_g000001
rosa_roxburghii Rroxscaffold_4G00309190
rosa_rugosa Rorug01G0176400.1
rosa_samantha Rh1AG194400 Rh1DG191200
rosa_wichuraiana Rw1G016020

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 56
Acc65I GGTACC 1 cut(s) 337
AccB1I GGYRCC 1 cut(s) 337
AclI AACGTT 1 cut(s) 50
AfaI GTAC 1 cut(s) 339
AfiI CCNNNNNNNGG 2 cut(s) 460, 461
AflIII ACRYGT 1 cut(s) 123
AgsI TTSAA 3 cut(s) 12, 166, 582
AjnI CCWGG 1 cut(s) 433
AluBI AGCT 6 cut(s) 8, 44, 83, 312, 346, 513
AluI AGCT 6 cut(s) 8, 44, 83, 312, 346, 513
Alw26I GTCTC 3 cut(s) 212, 343, 399
Ama87I CYCGRG 1 cut(s) 341
AoxI GGCC 1 cut(s) 305
ApeKI GCWGC 2 cut(s) 17, 510
Asp718I GGTACC 1 cut(s) 337
AvaI CYCGRG 1 cut(s) 341
BanI GGYRCC 1 cut(s) 337
BbsI GAAGAC 2 cut(s) 92, 237
BbvI GCAGC 2 cut(s) 4, 522
BccI CCATC 2 cut(s) 71, 179
BceAI ACGGC 1 cut(s) 524
BciT130I CCWGG 1 cut(s) 435
BciVI GTATCC 1 cut(s) 208
BcoDI GTCTC 3 cut(s) 212, 343, 399
BfaI CTAG 1 cut(s) 309
BfuI GTATCC 1 cut(s) 208
BglII AGATCT 1 cut(s) 397
BisI GCNGC 2 cut(s) 18, 511
BlsI GCNGC 2 cut(s) 19, 512
Bme1390I CCNGG 1 cut(s) 435
BmeT110I CYCGRG 1 cut(s) 341
BmiI GGNNCC 2 cut(s) 339, 388
BmrFI CCNGG 1 cut(s) 435
BpiI GAAGAC 2 cut(s) 92, 237
BplI GAGNNNNNCTC 2 cut(s) 497, 529
BsaI GGTCTC 1 cut(s) 212
BsaXI ACNNNNNCTCC 2 cut(s) 258, 288
Bsc4I CCNNNNNNNGG 2 cut(s) 460, 461
Bse3DI GCAATG 1 cut(s) 321
BseBI CCWGG 1 cut(s) 435
BseGI GGATG 1 cut(s) 571
BseLI CCNNNNNNNGG 2 cut(s) 460, 461
BseMI GCAATG 1 cut(s) 321
BseMII CTCAG 1 cut(s) 338
BseRI GAGGAG 1 cut(s) 279
BseXI GCAGC 2 cut(s) 4, 522
BsgI GTGCAG 1 cut(s) 529
BshFI GGCC 1 cut(s) 307
BshNI GGYRCC 1 cut(s) 337
BsiHKCI CYCGRG 1 cut(s) 341
BslI CCNNNNNNNGG 2 cut(s) 460, 461
BsmAI GTCTC 3 cut(s) 212, 343, 399
BsnI GGCC 1 cut(s) 307
Bso31I GGTCTC 1 cut(s) 212
BsoBI CYCGRG 1 cut(s) 341
Bsp143I GATC 3 cut(s) 397, 555, 606
BspANI GGCC 1 cut(s) 307
BspCNI CTCAG 1 cut(s) 339
BspLI GGNNCC 2 cut(s) 339, 388
BspT107I GGYRCC 1 cut(s) 337
BspTNI GGTCTC 1 cut(s) 212
BsrDI GCAATG 1 cut(s) 321
BssMI GATC 3 cut(s) 397, 555, 606
Bst2UI CCWGG 1 cut(s) 435
Bst4CI ACNGT 4 cut(s) 70, 151, 196, 367
BstC8I GCNNGC 2 cut(s) 305, 442
BstDEI CTNAG 4 cut(s) 347, 401, 473, 588
BstF5I GGATG 1 cut(s) 571
BstKTI GATC 3 cut(s) 400, 558, 609
BstMAI GTCTC 3 cut(s) 212, 343, 399
BstMBI GATC 3 cut(s) 397, 555, 606
BstMWI GCNNNNNNNGC 2 cut(s) 14, 309
BstNI CCWGG 1 cut(s) 435
BstNSI RCATGY 1 cut(s) 415
BstSCI CCNGG 1 cut(s) 433
BstV1I GCAGC 2 cut(s) 4, 522
BstV2I GAAGAC 2 cut(s) 92, 237
BstX2I RGATCY 1 cut(s) 397
BstYI RGATCY 1 cut(s) 397
BsuI GTATCC 1 cut(s) 208
BsuRI GGCC 1 cut(s) 307
BtgZI GCGATG 1 cut(s) 90
BtsCI GGATG 1 cut(s) 571
BtsIMutI CAGTG 3 cut(s) 66, 132, 156
Cac8I GCNNGC 2 cut(s) 305, 442
Csp6I GTAC 1 cut(s) 338
CviAII CATG 2 cut(s) 412, 620
CviJI RGCY 9 cut(s) 8, 17, 44, 83, 307, 312, 346, 513, 539
CviKI_1 RGCY 9 cut(s) 8, 17, 44, 83, 307, 312, 346, 513, 539
CviQI GTAC 1 cut(s) 338
DdeI CTNAG 4 cut(s) 347, 401, 473, 588
DpnI GATC 3 cut(s) 399, 557, 608
DpnII GATC 3 cut(s) 397, 555, 606
Eco147I AGGCCT 1 cut(s) 307
Eco31I GGTCTC 1 cut(s) 212
Eco88I CYCGRG 1 cut(s) 341
EcoRII CCWGG 1 cut(s) 433
FaeI CATG 2 cut(s) 415, 623
FaiI YATR 8 cut(s) 56, 141, 357, 413, 499, 503, 616, 621
FatI CATG 2 cut(s) 411, 619
Fnu4HI GCNGC 2 cut(s) 18, 511
FokI GGATG 1 cut(s) 558
Fsp4HI GCNGC 2 cut(s) 18, 511
FspBI CTAG 1 cut(s) 309
GluI GCNGC 2 cut(s) 18, 511
HaeIII GGCC 1 cut(s) 307
Hin1II CATG 2 cut(s) 415, 623
Hpy188I TCNGA 1 cut(s) 397
Hpy188III TCNNGA 2 cut(s) 227, 467
HpyAV CCTTC 2 cut(s) 298, 588
HpyCH4III ACNGT 4 cut(s) 70, 151, 196, 367
HpyCH4IV ACGT 3 cut(s) 50, 125, 531
HpyCH4V TGCA 4 cut(s) 20, 415, 444, 510
HpyF10VI GCNNNNNNNGC 2 cut(s) 14, 309
HpyF3I CTNAG 4 cut(s) 347, 401, 473, 588
HpySE526I ACGT 3 cut(s) 50, 125, 531
Hsp92II CATG 2 cut(s) 415, 623
KpnI GGTACC 1 cut(s) 341
Kzo9I GATC 3 cut(s) 397, 555, 606
LmnI GCTCC 3 cut(s) 80, 266, 488
LpnPI CCDG 9 cut(s) 130, 188, 196, 207, 289, 420, 446, 447, 468
Lsp1109I GCAGC 2 cut(s) 4, 522
MaeI CTAG 1 cut(s) 309
MaeII ACGT 3 cut(s) 50, 125, 531
MaeIII GTNAC 2 cut(s) 64, 257
MalI GATC 3 cut(s) 399, 557, 608
MboI GATC 3 cut(s) 397, 555, 606
MboII GAAGA 3 cut(s) 92, 242, 442
MflI RGATCY 1 cut(s) 397
MluCI AATT 2 cut(s) 160, 427
MmeI TCCRAC 1 cut(s) 170
MnlI CCTC 2 cut(s) 257, 585
MspR9I CCNGG 1 cut(s) 435
MvaI CCWGG 1 cut(s) 435
MwoI GCNNNNNNNGC 2 cut(s) 14, 309
NdeII GATC 3 cut(s) 397, 555, 606
NlaIII CATG 2 cut(s) 415, 623
NlaIV GGNNCC 2 cut(s) 339, 388
NmuCI GTSAC 1 cut(s) 64
NspI RCATGY 1 cut(s) 415
PceI AGGCCT 1 cut(s) 307
PcsI WCGNNNNNNNCGW 1 cut(s) 537
PkrI GCNGC 2 cut(s) 19, 512
PsiI TTATAA 1 cut(s) 56
Psp1406I AACGTT 1 cut(s) 50
Psp6I CCWGG 1 cut(s) 433
PspGI CCWGG 1 cut(s) 433
PspN4I GGNNCC 2 cut(s) 339, 388
PsuI RGATCY 1 cut(s) 397
RsaI GTAC 1 cut(s) 339
RsaNI GTAC 1 cut(s) 338
SatI GCNGC 2 cut(s) 18, 511
Sau3AI GATC 3 cut(s) 397, 555, 606
ScrFI CCNGG 1 cut(s) 435
Sse9I AATT 2 cut(s) 160, 427
SseBI AGGCCT 1 cut(s) 307
SspMI CTAG 1 cut(s) 309
StuI AGGCCT 1 cut(s) 307
StyD4I CCNGG 1 cut(s) 433
TaaI ACNGT 4 cut(s) 70, 151, 196, 367
TaiI ACGT 3 cut(s) 53, 128, 534
TaqI TCGA 2 cut(s) 156, 183
TasI AATT 2 cut(s) 160, 427
TscAI CASTG 3 cut(s) 73, 139, 156
TseFI GTSAC 1 cut(s) 64
TseI GCWGC 2 cut(s) 17, 510
Tsp45I GTSAC 1 cut(s) 64
TspDTI ATGAA 3 cut(s) 268, 542, 564
TspRI CASTG 3 cut(s) 73, 139, 156
XceI RCATGY 1 cut(s) 415
XspI CTAG 1 cut(s) 309
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.