Hydrophobic seed protein
Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.
| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT2G45180 |
| fragaria_vesca | FvH4_5g00110 |
| prunus_persica | Prupe.5G072800_v2.0.a1 |
| pyrus_communis | pycom06g06270 |
| rosa_chinensis | RchiOBHm_Chr7g0202821 |
| rosa_laevigata | RLG00000003569 |
| rosa_multiflora | Rmu_sc0011770.1_g000001 |
| rosa_rugosa | Rorug07G0073300 |
| rosa_samantha | Rh7AG201100 Rh7BG201300 Rh7CG212500 Rh7DG208000 |
| rosa_wichuraiana | Rw7G017590 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| Acc16I | TGCGCA | 1 cut(s) | 187 |
| AccBSI | CCGCTC | 1 cut(s) | 299 |
| AciI | CCGC | 2 cut(s) | 281, 297 |
| AclI | AACGTT | 1 cut(s) | 210 |
| AfaI | GTAC | 1 cut(s) | 247 |
| AflII | CTTAAG | 1 cut(s) | 170 |
| AgsI | TTSAA | 3 cut(s) | 257, 275, 361 |
| AluBI | AGCT | 3 cut(s) | 29, 175, 278 |
| AluI | AGCT | 3 cut(s) | 29, 175, 278 |
| Alw26I | GTCTC | 1 cut(s) | 293 |
| AoxI | GGCC | 1 cut(s) | 199 |
| ApeKI | GCWGC | 1 cut(s) | 278 |
| AseI | ATTAAT | 1 cut(s) | 324 |
| AspLEI | GCGC | 1 cut(s) | 188 |
| AspS9I | GGNCC | 1 cut(s) | 199 |
| AsuHPI | GGTGA | 1 cut(s) | 52 |
| BbvI | GCAGC | 1 cut(s) | 265 |
| BceAI | ACGGC | 1 cut(s) | 125 |
| BcoDI | GTCTC | 1 cut(s) | 293 |
| BfaI | CTAG | 1 cut(s) | 203 |
| BfrI | CTTAAG | 1 cut(s) | 170 |
| BisI | GCNGC | 1 cut(s) | 279 |
| BlsI | GCNGC | 1 cut(s) | 280 |
| BmgT120I | GGNCC | 1 cut(s) | 199 |
| BmiI | GGNNCC | 1 cut(s) | 135 |
| BseXI | GCAGC | 1 cut(s) | 265 |
| BsgI | GTGCAG | 1 cut(s) | 277 |
| BshFI | GGCC | 1 cut(s) | 201 |
| BsmAI | GTCTC | 1 cut(s) | 293 |
| BsnI | GGCC | 1 cut(s) | 201 |
| Bsp1407I | TGTACA | 1 cut(s) | 245 |
| Bsp143I | GATC | 1 cut(s) | 343 |
| BspACI | CCGC | 2 cut(s) | 281, 297 |
| BspANI | GGCC | 1 cut(s) | 201 |
| BspLI | GGNNCC | 1 cut(s) | 135 |
| BspQI | GCTCTTC | 1 cut(s) | 36 |
| BspTI | CTTAAG | 1 cut(s) | 170 |
| BsrBI | CCGCTC | 1 cut(s) | 299 |
| BsrGI | TGTACA | 1 cut(s) | 245 |
| BssMI | GATC | 1 cut(s) | 343 |
| Bst6I | CTCTTC | 1 cut(s) | 36 |
| BstAFI | CTTAAG | 1 cut(s) | 170 |
| BstAUI | TGTACA | 1 cut(s) | 245 |
| BstDEI | CTNAG | 2 cut(s) | 9, 126 |
| BstHHI | GCGC | 1 cut(s) | 188 |
| BstKTI | GATC | 1 cut(s) | 346 |
| BstMAI | GTCTC | 1 cut(s) | 293 |
| BstMBI | GATC | 1 cut(s) | 343 |
| BstMWI | GCNNNNNNNGC | 3 cut(s) | 11, 26, 305 |
| BstV1I | GCAGC | 1 cut(s) | 265 |
| BstXI | CCANNNNNNTGG | 1 cut(s) | 316 |
| BsuRI | GGCC | 1 cut(s) | 201 |
| CfoI | GCGC | 1 cut(s) | 188 |
| Cfr13I | GGNCC | 1 cut(s) | 199 |
| Csp6I | GTAC | 1 cut(s) | 246 |
| CviAII | CATG | 1 cut(s) | 386 |
| CviJI | RGCY | 8 cut(s) | 5, 14, 29, 134, 175, 201, 278, 308 |
| CviKI_1 | RGCY | 8 cut(s) | 5, 14, 29, 134, 175, 201, 278, 308 |
| CviQI | GTAC | 1 cut(s) | 246 |
| DdeI | CTNAG | 2 cut(s) | 9, 126 |
| DpnI | GATC | 1 cut(s) | 345 |
| DpnII | GATC | 1 cut(s) | 343 |
| Eam1104I | CTCTTC | 1 cut(s) | 36 |
| EarI | CTCTTC | 1 cut(s) | 36 |
| FaeI | CATG | 1 cut(s) | 389 |
| FaiI | YATR | 1 cut(s) | 387 |
| FatI | CATG | 1 cut(s) | 385 |
| Fnu4HI | GCNGC | 1 cut(s) | 279 |
| Fsp4HI | GCNGC | 1 cut(s) | 279 |
| FspBI | CTAG | 1 cut(s) | 203 |
| FspI | TGCGCA | 1 cut(s) | 187 |
| GlaI | GCGC | 1 cut(s) | 187 |
| GluI | GCNGC | 1 cut(s) | 279 |
| HaeIII | GGCC | 1 cut(s) | 201 |
| HhaI | GCGC | 1 cut(s) | 188 |
| Hin1II | CATG | 1 cut(s) | 389 |
| Hin6I | GCGC | 1 cut(s) | 186 |
| HinP1I | GCGC | 1 cut(s) | 186 |
| HincII | GTYRAC | 1 cut(s) | 208 |
| HindII | GTYRAC | 1 cut(s) | 208 |
| HindIII | AAGCTT | 1 cut(s) | 173 |
| HinfI | GANTC | 1 cut(s) | 235 |
| HpaI | GTTAAC | 1 cut(s) | 208 |
| HphI | GGTGA | 1 cut(s) | 52 |
| Hpy166II | GTNNAC | 3 cut(s) | 86, 208, 248 |
| Hpy188III | TCNNGA | 2 cut(s) | 272, 402 |
| Hpy8I | GTNNAC | 3 cut(s) | 86, 208, 248 |
| HpyAV | CCTTC | 1 cut(s) | 124 |
| HpyCH4IV | ACGT | 1 cut(s) | 210 |
| HpyCH4V | TGCA | 2 cut(s) | 20, 294 |
| HpyF10VI | GCNNNNNNNGC | 3 cut(s) | 11, 26, 305 |
| HpyF3I | CTNAG | 2 cut(s) | 9, 126 |
| HpySE526I | ACGT | 1 cut(s) | 210 |
| Hsp92II | CATG | 1 cut(s) | 389 |
| HspAI | GCGC | 1 cut(s) | 186 |
| KspAI | GTTAAC | 1 cut(s) | 208 |
| Kzo9I | GATC | 1 cut(s) | 343 |
| LguI | GCTCTTC | 1 cut(s) | 36 |
| LmnI | GCTCC | 1 cut(s) | 139 |
| LpnPI | CCDG | 1 cut(s) | 150 |
| Lsp1109I | GCAGC | 1 cut(s) | 265 |
| MaeI | CTAG | 1 cut(s) | 203 |
| MaeII | ACGT | 1 cut(s) | 210 |
| MaeIII | GTNAC | 2 cut(s) | 22, 67 |
| MalI | GATC | 1 cut(s) | 345 |
| MbiI | CCGCTC | 1 cut(s) | 299 |
| MboI | GATC | 1 cut(s) | 343 |
| MboII | GAAGA | 4 cut(s) | 23, 41, 49, 245 |
| MlyI | GAGTC | 1 cut(s) | 229 |
| MnlI | CCTC | 2 cut(s) | 82, 393 |
| MseI | TTAA | 5 cut(s) | 45, 171, 207, 303, 324 |
| MspCI | CTTAAG | 1 cut(s) | 170 |
| MwoI | GCNNNNNNNGC | 3 cut(s) | 11, 26, 305 |
| NdeII | GATC | 1 cut(s) | 343 |
| NlaIII | CATG | 1 cut(s) | 389 |
| NlaIV | GGNNCC | 1 cut(s) | 135 |
| NsbI | TGCGCA | 1 cut(s) | 187 |
| PciSI | GCTCTTC | 1 cut(s) | 36 |
| PkrI | GCNGC | 1 cut(s) | 280 |
| PleI | GAGTC | 1 cut(s) | 229 |
| PpsI | GAGTC | 1 cut(s) | 229 |
| PshBI | ATTAAT | 1 cut(s) | 324 |
| Psp1406I | AACGTT | 1 cut(s) | 210 |
| PspN4I | GGNNCC | 1 cut(s) | 135 |
| PspPI | GGNCC | 1 cut(s) | 199 |
| RsaI | GTAC | 1 cut(s) | 247 |
| RsaNI | GTAC | 1 cut(s) | 246 |
| SapI | GCTCTTC | 1 cut(s) | 36 |
| SaqAI | TTAA | 5 cut(s) | 45, 171, 207, 303, 324 |
| SatI | GCNGC | 1 cut(s) | 279 |
| Sau3AI | GATC | 1 cut(s) | 343 |
| Sau96I | GGNCC | 1 cut(s) | 199 |
| SchI | GAGTC | 1 cut(s) | 229 |
| SetI | ASST | 8 cut(s) | 31, 65, 74, 177, 213, 262, 280, 353 |
| SmlI | CTYRAG | 1 cut(s) | 170 |
| SmoI | CTYRAG | 1 cut(s) | 170 |
| SsiI | CCGC | 2 cut(s) | 281, 297 |
| SspMI | CTAG | 1 cut(s) | 203 |
| TaiI | ACGT | 1 cut(s) | 213 |
| TatI | WGTACW | 1 cut(s) | 245 |
| Tru1I | TTAA | 5 cut(s) | 45, 171, 207, 303, 324 |
| Tru9I | TTAA | 5 cut(s) | 45, 171, 207, 303, 324 |
| TseI | GCWGC | 1 cut(s) | 278 |
| Vha464I | CTTAAG | 1 cut(s) | 170 |
| VspI | ATTAAT | 1 cut(s) | 324 |
| XspI | CTAG | 1 cut(s) | 203 |