Domain of unknown function (DUF4336)
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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT3G01060 AT3G01060 |
| fragaria_vesca | FvH4_6g47510 |
| malus_domestica | MD17G1056600.v1.1 |
| prunus_persica | Prupe.3G258900_v2.0.a1 |
| pyrus_communis | pycom17g05560 |
| rosa_chinensis | RchiOBHm_Chr2g0166541 |
| rosa_laevigata | RLG00000021628 |
| rosa_multiflora | Rmu_sc0010842.1_g000007 |
| rosa_roxburghii | Rroxscaffold_2G00084760 |
| rosa_rugosa | Rorug02G0524100 |
| rosa_samantha | Rh2AG590000 Rh2BG602100 Rh2CG572800 Rh2DG612700 |
| rosa_wichuraiana | Rw2G049180 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AccB7I | CCANNNNNTGG | 1 cut(s) | 701 |
| AccI | GTMKAC | 2 cut(s) | 115, 201 |
| AccII | CGCG | 1 cut(s) | 787 |
| AciI | CCGC | 8 cut(s) | 5, 11, 162, 296, 742, 785, 787, 913 |
| AclI | AACGTT | 1 cut(s) | 491 |
| AclWI | GGATC | 3 cut(s) | 881, 1085, 1197 |
| AcoI | YGGCCR | 3 cut(s) | 12, 18, 581 |
| AcsI | RAATTY | 1 cut(s) | 137 |
| AfaI | GTAC | 1 cut(s) | 476 |
| AfiI | CCNNNNNNNGG | 4 cut(s) | 132, 701, 1063, 1098 |
| AgsI | TTSAA | 2 cut(s) | 323, 589 |
| AhdI | GACNNNNNGTC | 1 cut(s) | 716 |
| AjuI | GAANNNNNNNTTGG | 2 cut(s) | 690, 722 |
| AloI | GAACNNNNNNTCC | 2 cut(s) | 666, 698 |
| Alw21I | GWGCWC | 2 cut(s) | 466, 507 |
| Alw26I | GTCTC | 2 cut(s) | 163, 1324 |
| AlwI | GGATC | 3 cut(s) | 881, 1085, 1197 |
| AlwNI | CAGNNNCTG | 1 cut(s) | 1012 |
| Ama87I | CYCGRG | 1 cut(s) | 799 |
| AoxI | GGCC | 4 cut(s) | 12, 18, 581, 825 |
| ApeKI | GCWGC | 4 cut(s) | 8, 348, 1169, 1259 |
| ApoI | RAATTY | 1 cut(s) | 137 |
| ArsI | GACNNNNNNTTYG | 4 cut(s) | 423, 455, 666, 698 |
| AspLEI | GCGC | 1 cut(s) | 279 |
| AspS9I | GGNCC | 4 cut(s) | 260, 521, 710, 959 |
| AsuC2I | CCSGG | 1 cut(s) | 134 |
| AsuHPI | GGTGA | 2 cut(s) | 163, 1078 |
| AsuII | TTCGAA | 1 cut(s) | 1131 |
| AvaI | CYCGRG | 1 cut(s) | 799 |
| AvaII | GGWCC | 4 cut(s) | 260, 521, 710, 959 |
| BalI | TGGCCA | 1 cut(s) | 583 |
| BanII | GRGCYC | 1 cut(s) | 466 |
| Bbv12I | GWGCWC | 2 cut(s) | 466, 507 |
| BbvCI | CCTCAGC | 1 cut(s) | 663 |
| BbvI | GCAGC | 4 cut(s) | 20, 360, 1156, 1246 |
| BccI | CCATC | 3 cut(s) | 148, 290, 918 |
| BceAI | ACGGC | 2 cut(s) | 5, 220 |
| BciVI | GTATCC | 1 cut(s) | 1357 |
| BclI | TGATCA | 1 cut(s) | 1306 |
| BcnI | CCSGG | 1 cut(s) | 134 |
| BcoDI | GTCTC | 2 cut(s) | 163, 1324 |
| BfaI | CTAG | 5 cut(s) | 531, 845, 1166, 1184, 1196 |
| BfuI | GTATCC | 1 cut(s) | 1357 |
| BisI | GCNGC | 6 cut(s) | 6, 9, 12, 349, 1170, 1260 |
| BlsI | GCNGC | 6 cut(s) | 7, 10, 13, 350, 1171, 1261 |
| Bme1390I | CCNGG | 1 cut(s) | 134 |
| Bme18I | GGWCC | 4 cut(s) | 260, 521, 710, 959 |
| BmeRI | GACNNNNNGTC | 1 cut(s) | 716 |
| BmeT110I | CYCGRG | 1 cut(s) | 799 |
| BmgT120I | GGNCC | 4 cut(s) | 260, 521, 710, 959 |
| BmiI | GGNNCC | 3 cut(s) | 961, 978, 1181 |
| BmrFI | CCNGG | 1 cut(s) | 134 |
| BmsI | GCATC | 1 cut(s) | 757 |
| BoxI | GACNNNNGTC | 2 cut(s) | 121, 1040 |
| BpmI | CTGGAG | 3 cut(s) | 414, 1120, 1260 |
| Bpu10I | CCTNAGC | 2 cut(s) | 663, 686 |
| Bpu14I | TTCGAA | 1 cut(s) | 1131 |
| BpuEI | CTTGAG | 2 cut(s) | 534, 620 |
| BpuMI | CCSGG | 1 cut(s) | 134 |
| Bsa29I | ATCGAT | 1 cut(s) | 1080 |
| BsaI | GGTCTC | 1 cut(s) | 163 |
| BsaJI | CCNNGG | 6 cut(s) | 15, 291, 543, 656, 785, 828 |
| BsaWI | WCCGGW | 3 cut(s) | 148, 466, 1349 |
| BsaXI | ACNNNNNCTCC | 2 cut(s) | 453, 483 |
| Bsc4I | CCNNNNNNNGG | 4 cut(s) | 132, 701, 1063, 1098 |
| Bse118I | RCCGGY | 1 cut(s) | 273 |
| Bse1I | ACTGG | 2 cut(s) | 244, 1103 |
| BseCI | ATCGAT | 1 cut(s) | 1080 |
| BseDI | CCNNGG | 6 cut(s) | 15, 291, 543, 656, 785, 828 |
| BseGI | GGATG | 2 cut(s) | 321, 929 |
| BseLI | CCNNNNNNNGG | 4 cut(s) | 132, 701, 1063, 1098 |
| BseMII | CTCAG | 2 cut(s) | 654, 1050 |
| BseNI | ACTGG | 2 cut(s) | 244, 1103 |
| BseRI | GAGGAG | 1 cut(s) | 680 |
| BseXI | GCAGC | 4 cut(s) | 20, 360, 1156, 1246 |
| BseYI | CCCAGC | 1 cut(s) | 1120 |
| Bsh1236I | CGCG | 1 cut(s) | 787 |
| BshFI | GGCC | 4 cut(s) | 14, 20, 583, 827 |
| BshVI | ATCGAT | 1 cut(s) | 1080 |
| BsiHKAI | GWGCWC | 2 cut(s) | 466, 507 |
| BsiHKCI | CYCGRG | 1 cut(s) | 799 |
| BsiSI | CCGG | 5 cut(s) | 133, 149, 274, 467, 1350 |
| BslFI | GGGAC | 4 cut(s) | 656, 767, 945, 1040 |
| BslI | CCNNNNNNNGG | 4 cut(s) | 132, 701, 1063, 1098 |
| BsmAI | GTCTC | 2 cut(s) | 163, 1324 |
| BsmFI | GGGAC | 4 cut(s) | 656, 767, 945, 1040 |
| BsnI | GGCC | 4 cut(s) | 14, 20, 583, 827 |
| Bso31I | GGTCTC | 1 cut(s) | 163 |
| BsoBI | CYCGRG | 1 cut(s) | 799 |
| Bsp119I | TTCGAA | 1 cut(s) | 1131 |
| Bsp1286I | GDGCHC | 2 cut(s) | 466, 507 |
| Bsp143I | GATC | 9 cut(s) | 208, 669, 774, 886, 1014, 1077, 1154, 1189, 1306 |
| Bsp19I | CCATGG | 2 cut(s) | 15, 656 |
| BspACI | CCGC | 8 cut(s) | 5, 11, 162, 296, 742, 785, 787, 913 |
| BspANI | GGCC | 4 cut(s) | 14, 20, 583, 827 |
| BspCNI | CTCAG | 2 cut(s) | 655, 1051 |
| BspDI | ATCGAT | 1 cut(s) | 1080 |
| BspFNI | CGCG | 1 cut(s) | 787 |
| BspLI | GGNNCC | 3 cut(s) | 961, 978, 1181 |
| BspPI | GGATC | 3 cut(s) | 881, 1085, 1197 |
| BspT104I | TTCGAA | 1 cut(s) | 1131 |
| BspTNI | GGTCTC | 1 cut(s) | 163 |
| BsrFI | RCCGGY | 1 cut(s) | 273 |
| BsrI | ACTGG | 2 cut(s) | 244, 1103 |
| BssAI | RCCGGY | 1 cut(s) | 273 |
| BssECI | CCNNGG | 6 cut(s) | 15, 291, 543, 656, 785, 828 |
| BssMI | GATC | 9 cut(s) | 208, 669, 774, 886, 1014, 1077, 1154, 1189, 1306 |
| BssT1I | CCWWGG | 3 cut(s) | 15, 543, 656 |
| Bst4CI | ACNGT | 4 cut(s) | 146, 184, 376, 1345 |
| Bst6I | CTCTTC | 3 cut(s) | 1236, 1241, 1303 |
| BstBI | TTCGAA | 1 cut(s) | 1131 |
| BstC8I | GCNNGC | 3 cut(s) | 581, 988, 1264 |
| BstDEI | CTNAG | 6 cut(s) | 663, 686, 834, 860, 1059, 1315 |
| BstDSI | CCRYGG | 3 cut(s) | 15, 656, 785 |
| BstF5I | GGATG | 2 cut(s) | 321, 929 |
| BstFNI | CGCG | 1 cut(s) | 787 |
| BstHHI | GCGC | 1 cut(s) | 279 |
| BstKTI | GATC | 9 cut(s) | 211, 672, 777, 889, 1017, 1080, 1157, 1192, 1309 |
| BstMAI | GTCTC | 2 cut(s) | 163, 1324 |
| BstMBI | GATC | 9 cut(s) | 208, 669, 774, 886, 1014, 1077, 1154, 1189, 1306 |
| BstMWI | GCNNNNNNNGC | 4 cut(s) | 11, 17, 419, 992 |
| BstPAI | GACNNNNGTC | 2 cut(s) | 121, 1040 |
| BstSCI | CCNGG | 1 cut(s) | 132 |
| BstUI | CGCG | 1 cut(s) | 787 |
| BstV1I | GCAGC | 4 cut(s) | 20, 360, 1156, 1246 |
| BstX2I | RGATCY | 1 cut(s) | 1189 |
| BstXI | CCANNNNNNTGG | 1 cut(s) | 573 |
| BstYI | RGATCY | 1 cut(s) | 1189 |
| Bsu15I | ATCGAT | 1 cut(s) | 1080 |
| BsuI | GTATCC | 1 cut(s) | 1357 |
| BsuRI | GGCC | 4 cut(s) | 14, 20, 583, 827 |
| BsuTUI | ATCGAT | 1 cut(s) | 1080 |
| BtgI | CCRYGG | 3 cut(s) | 15, 656, 785 |
| BtsCI | GGATG | 2 cut(s) | 321, 929 |
| BtsIMutI | CAGTG | 2 cut(s) | 237, 762 |
| Cac8I | GCNNGC | 3 cut(s) | 581, 988, 1264 |
| CaiI | CAGNNNCTG | 1 cut(s) | 1012 |
| CfoI | GCGC | 1 cut(s) | 279 |
| Cfr10I | RCCGGY | 1 cut(s) | 273 |
| Cfr13I | GGNCC | 4 cut(s) | 260, 521, 710, 959 |
| Cfr42I | CCGCGG | 1 cut(s) | 788 |
| ClaI | ATCGAT | 1 cut(s) | 1080 |
| Csp6I | GTAC | 1 cut(s) | 475 |
| CviAII | CATG | 4 cut(s) | 16, 121, 410, 657 |
| CviQI | GTAC | 1 cut(s) | 475 |
| DdeI | CTNAG | 6 cut(s) | 663, 686, 834, 860, 1059, 1315 |
| DpnI | GATC | 9 cut(s) | 210, 671, 776, 888, 1016, 1079, 1156, 1191, 1308 |
| DpnII | GATC | 9 cut(s) | 208, 669, 774, 886, 1014, 1077, 1154, 1189, 1306 |
| DraI | TTTAAA | 1 cut(s) | 1108 |
| DriI | GACNNNNNGTC | 1 cut(s) | 716 |
| EaeI | YGGCCR | 3 cut(s) | 12, 18, 581 |
| Eam1104I | CTCTTC | 3 cut(s) | 1236, 1241, 1303 |
| Eam1105I | GACNNNNNGTC | 1 cut(s) | 716 |
| EarI | CTCTTC | 3 cut(s) | 1236, 1241, 1303 |
| Ecl136II | GAGCTC | 1 cut(s) | 464 |
| Eco130I | CCWWGG | 3 cut(s) | 15, 543, 656 |
| Eco24I | GRGCYC | 1 cut(s) | 466 |
| Eco31I | GGTCTC | 1 cut(s) | 163 |
| Eco47I | GGWCC | 4 cut(s) | 260, 521, 710, 959 |
| Eco53kI | GAGCTC | 1 cut(s) | 464 |
| Eco88I | CYCGRG | 1 cut(s) | 799 |
| EcoICRI | GAGCTC | 1 cut(s) | 464 |
| EcoT14I | CCWWGG | 3 cut(s) | 15, 543, 656 |
| EcoT38I | GRGCYC | 1 cut(s) | 466 |
| ErhI | CCWWGG | 3 cut(s) | 15, 543, 656 |
| FaeI | CATG | 4 cut(s) | 19, 124, 413, 660 |
| FaqI | GGGAC | 4 cut(s) | 656, 767, 945, 1040 |
| FatI | CATG | 4 cut(s) | 15, 120, 409, 656 |
| FauI | CCCGC | 2 cut(s) | 792, 920 |
| FauNDI | CATATG | 2 cut(s) | 311, 715 |
| FbaI | TGATCA | 1 cut(s) | 1306 |
| FblI | GTMKAC | 2 cut(s) | 115, 201 |
| Fnu4HI | GCNGC | 6 cut(s) | 6, 9, 12, 349, 1170, 1260 |
| FokI | GGATG | 2 cut(s) | 328, 936 |
| FriOI | GRGCYC | 1 cut(s) | 466 |
| Fsp4HI | GCNGC | 6 cut(s) | 6, 9, 12, 349, 1170, 1260 |
| FspBI | CTAG | 5 cut(s) | 531, 845, 1166, 1184, 1196 |
| GlaI | GCGC | 1 cut(s) | 278 |
| GluI | GCNGC | 6 cut(s) | 6, 9, 12, 349, 1170, 1260 |
| GsaI | CCCAGC | 1 cut(s) | 1124 |
| GsuI | CTGGAG | 3 cut(s) | 414, 1120, 1260 |
| HaeIII | GGCC | 4 cut(s) | 14, 20, 583, 827 |
| HapII | CCGG | 5 cut(s) | 133, 149, 274, 467, 1350 |
| HhaI | GCGC | 1 cut(s) | 279 |
| Hin1II | CATG | 4 cut(s) | 19, 124, 413, 660 |
| Hin6I | GCGC | 1 cut(s) | 277 |
| HinP1I | GCGC | 1 cut(s) | 277 |
| HincII | GTYRAC | 1 cut(s) | 116 |
| HindII | GTYRAC | 1 cut(s) | 116 |
| HindIII | AAGCTT | 2 cut(s) | 333, 988 |
| HinfI | GANTC | 2 cut(s) | 815, 967 |
| HpaII | CCGG | 5 cut(s) | 133, 149, 274, 467, 1350 |
| HphI | GGTGA | 2 cut(s) | 163, 1078 |
| Hpy166II | GTNNAC | 5 cut(s) | 116, 130, 202, 218, 357 |
| Hpy188I | TCNGA | 3 cut(s) | 54, 287, 1159 |
| Hpy188III | TCNNGA | 5 cut(s) | 31, 393, 531, 747, 1277 |
| Hpy8I | GTNNAC | 5 cut(s) | 116, 130, 202, 218, 357 |
| Hpy99I | CGWCG | 1 cut(s) | 175 |
| HpyAV | CCTTC | 2 cut(s) | 1057, 1230 |
| HpyCH4III | ACNGT | 4 cut(s) | 146, 184, 376, 1345 |
| HpyCH4IV | ACGT | 2 cut(s) | 198, 491 |
| HpyCH4V | TGCA | 3 cut(s) | 309, 563, 943 |
| HpyF10VI | GCNNNNNNNGC | 4 cut(s) | 11, 17, 419, 992 |
| HpyF3I | CTNAG | 6 cut(s) | 663, 686, 834, 860, 1059, 1315 |
| HpySE526I | ACGT | 2 cut(s) | 198, 491 |
| Hsp92II | CATG | 4 cut(s) | 19, 124, 413, 660 |
| HspAI | GCGC | 1 cut(s) | 277 |
| Ksp22I | TGATCA | 1 cut(s) | 1306 |
| KspI | CCGCGG | 1 cut(s) | 788 |
| Kzo9I | GATC | 9 cut(s) | 208, 669, 774, 886, 1014, 1077, 1154, 1189, 1306 |
| LmnI | GCTCC | 7 cut(s) | 418, 427, 461, 469, 576, 695, 1141 |
| Lsp1109I | GCAGC | 4 cut(s) | 20, 360, 1156, 1246 |
| LweI | GCATC | 1 cut(s) | 757 |
| MaeI | CTAG | 5 cut(s) | 531, 845, 1166, 1184, 1196 |
| MaeII | ACGT | 2 cut(s) | 198, 491 |
| MaeIII | GTNAC | 4 cut(s) | 760, 1002, 1094, 1210 |
| MalI | GATC | 9 cut(s) | 210, 671, 776, 888, 1016, 1079, 1156, 1191, 1308 |
| MboI | GATC | 9 cut(s) | 208, 669, 774, 886, 1014, 1077, 1154, 1189, 1306 |
| MflI | RGATCY | 1 cut(s) | 1189 |
| MhlI | GDGCHC | 2 cut(s) | 466, 507 |
| MlsI | TGGCCA | 1 cut(s) | 583 |
| MluCI | AATT | 3 cut(s) | 106, 137, 705 |
| MluNI | TGGCCA | 1 cut(s) | 583 |
| MmeI | TCCRAC | 1 cut(s) | 682 |
| Mox20I | TGGCCA | 1 cut(s) | 583 |
| MscI | TGGCCA | 1 cut(s) | 583 |
| MseI | TTAA | 7 cut(s) | 105, 141, 231, 270, 300, 450, 1107 |
| MslI | CAYNNNNRTG | 1 cut(s) | 314 |
| Msp20I | TGGCCA | 1 cut(s) | 583 |
| MspA1I | CMGCKG | 2 cut(s) | 11, 787 |
| MspI | CCGG | 5 cut(s) | 133, 149, 274, 467, 1350 |
| MspR9I | CCNGG | 1 cut(s) | 134 |
| MvnI | CGCG | 1 cut(s) | 787 |
| MwoI | GCNNNNNNNGC | 4 cut(s) | 11, 17, 419, 992 |
| NciI | CCSGG | 1 cut(s) | 134 |
| NcoI | CCATGG | 2 cut(s) | 15, 656 |
| NdeI | CATATG | 2 cut(s) | 311, 715 |
| NdeII | GATC | 9 cut(s) | 208, 669, 774, 886, 1014, 1077, 1154, 1189, 1306 |
| NlaIII | CATG | 4 cut(s) | 19, 124, 413, 660 |
| NlaIV | GGNNCC | 3 cut(s) | 961, 978, 1181 |
| NmeAIII | GCCGAG | 1 cut(s) | 809 |
| NmuCI | GTSAC | 3 cut(s) | 760, 1002, 1094 |
| NspV | TTCGAA | 1 cut(s) | 1131 |
| PaeR7I | CTCGAG | 1 cut(s) | 799 |
| PcsI | WCGNNNNNNNCGW | 2 cut(s) | 50, 204 |
| PfeI | GAWTC | 2 cut(s) | 815, 967 |
| PflMI | CCANNNNNTGG | 1 cut(s) | 701 |
| PkrI | GCNGC | 6 cut(s) | 7, 10, 13, 350, 1171, 1261 |
| PshAI | GACNNNNGTC | 2 cut(s) | 121, 1040 |
| Psp124BI | GAGCTC | 1 cut(s) | 466 |
| Psp1406I | AACGTT | 1 cut(s) | 491 |
| PspFI | CCCAGC | 1 cut(s) | 1120 |
| PspN4I | GGNNCC | 3 cut(s) | 961, 978, 1181 |
| PspPI | GGNCC | 4 cut(s) | 260, 521, 710, 959 |
| PspXI | VCTCGAGB | 1 cut(s) | 799 |
| PstNI | CAGNNNCTG | 1 cut(s) | 1012 |
| PsuI | RGATCY | 1 cut(s) | 1189 |
| RsaI | GTAC | 1 cut(s) | 476 |
| RsaNI | GTAC | 1 cut(s) | 475 |
| RseI | CAYNNNNRTG | 1 cut(s) | 314 |
| SacI | GAGCTC | 1 cut(s) | 466 |
| SacII | CCGCGG | 1 cut(s) | 788 |
| SalI | GTCGAC | 1 cut(s) | 114 |
| SaqAI | TTAA | 7 cut(s) | 105, 141, 231, 270, 300, 450, 1107 |
| SatI | GCNGC | 6 cut(s) | 6, 9, 12, 349, 1170, 1260 |
| Sau3AI | GATC | 9 cut(s) | 208, 669, 774, 886, 1014, 1077, 1154, 1189, 1306 |
| Sau96I | GGNCC | 4 cut(s) | 260, 521, 710, 959 |
| ScrFI | CCNGG | 1 cut(s) | 134 |
| SduI | GDGCHC | 2 cut(s) | 466, 507 |
| SfaNI | GCATC | 1 cut(s) | 757 |
| Sfr274I | CTCGAG | 1 cut(s) | 799 |
| Sfr303I | CCGCGG | 1 cut(s) | 788 |
| SfuI | TTCGAA | 1 cut(s) | 1131 |
| SgrBI | CCGCGG | 1 cut(s) | 788 |
| SinI | GGWCC | 4 cut(s) | 260, 521, 710, 959 |
| SlaI | CTCGAG | 1 cut(s) | 799 |
| SmiMI | CAYNNNNRTG | 1 cut(s) | 314 |
| SmlI | CTYRAG | 3 cut(s) | 549, 599, 799 |
| SmoI | CTYRAG | 3 cut(s) | 549, 599, 799 |
| Sse9I | AATT | 3 cut(s) | 106, 137, 705 |
| SsiI | CCGC | 8 cut(s) | 5, 11, 162, 296, 742, 785, 787, 913 |
| SspMI | CTAG | 5 cut(s) | 531, 845, 1166, 1184, 1196 |
| SstI | GAGCTC | 1 cut(s) | 466 |
| StyD4I | CCNGG | 1 cut(s) | 132 |
| StyI | CCWWGG | 3 cut(s) | 15, 543, 656 |
| TaaI | ACNGT | 4 cut(s) | 146, 184, 376, 1345 |
| TaiI | ACGT | 2 cut(s) | 201, 494 |
| TaqI | TCGA | 8 cut(s) | 115, 170, 672, 720, 800, 965, 1080, 1131 |
| TaqII | GACCGA | 1 cut(s) | 509 |
| TasI | AATT | 3 cut(s) | 106, 137, 705 |
| TatI | WGTACW | 1 cut(s) | 474 |
| TauI | GCSGC | 2 cut(s) | 8, 14 |
| TfiI | GAWTC | 2 cut(s) | 815, 967 |
| Tru1I | TTAA | 7 cut(s) | 105, 141, 231, 270, 300, 450, 1107 |
| Tru9I | TTAA | 7 cut(s) | 105, 141, 231, 270, 300, 450, 1107 |
| TscAI | CASTG | 2 cut(s) | 244, 769 |
| TseFI | GTSAC | 3 cut(s) | 760, 1002, 1094 |
| TseI | GCWGC | 4 cut(s) | 8, 348, 1169, 1259 |
| Tsp45I | GTSAC | 3 cut(s) | 760, 1002, 1094 |
| TspDTI | ATGAA | 2 cut(s) | 14, 398 |
| TspGWI | ACGGA | 1 cut(s) | 115 |
| TspRI | CASTG | 2 cut(s) | 244, 769 |
| Van91I | CCANNNNNTGG | 1 cut(s) | 701 |
| VpaK11BI | GGWCC | 4 cut(s) | 260, 521, 710, 959 |
| XapI | RAATTY | 1 cut(s) | 137 |
| XbaI | TCTAGA | 1 cut(s) | 530 |
| XcmI | CCANNNNNNNNNTGG | 1 cut(s) | 67 |
| XhoI | CTCGAG | 1 cut(s) | 799 |
| XmiI | GTMKAC | 2 cut(s) | 115, 201 |
| XspI | CTAG | 5 cut(s) | 531, 845, 1166, 1184, 1196 |