AT3G01810

BEST Arabidopsis thaliana protein match is nucleolar protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
arabidopsis_thaliana
3
OG0004680
Physical Location & Seq
Forward (+)
288158 .. 292770
4613 bp
Loading structure...
UTR
Exon/CDS
Intron
AT3G01810.3

Sequence Viewer

Length: 2766 bp
ATGGTTTTGGGTTTAAGCTCAAAGAACAGAAGATGCTCATCGGTACAAGTTGATTACCTGATCCACATTCATGACATCAAGCCTTGGCCTCCTTCTCAGTCCCTTCGATCTCTTCGCTCTGTTGTTATCCAATGGGAGAATGGTGACCGCAATTCTGGTACCACTTCTGTTGTTGCTCCTTCTCTTGGTTCTGTCATTGGCGAAGGCAAAATCGAGTTCAACGAATCATTTAAGCTTCCCCTCACCTTGTTGAAAGATGTCTCTGCTCGGGGCAAAGGTGGTGATGTCTTCTTCAAGAACGTCTTAGAGCTCAACTTATACGAGCCTCGCAGAGAGAAAACACATCAGCTTTTGGCTACTGCCACCATTGATTTGGCTGTGTACGGTGTTGTCAAAGAAAGTTTCAGCTTGACTGCTCAAATGAACAGTAAACGAAGCTACCGGAATGCCACTCAGCCTGTTCTGTACCTCACTATTCAACCCGTTAGTAGACGCCGGGCCAGTTCTTCATCTATGAACAGCTTGAAGGATGAAGCCAAGAATGGGGGTGAATCTGTTTCTGCCTTGATGAATGAGGAATACTATAAGGAAGCTGAGATTGCTTCCATCACAGACGACGACATTTCCTCCCACTCCTCCTTGACAGTCTCATCTTCAACTTTAGAGTCTAATGGTGGTTTTTCTGTGCGAACCGAAGAGGAAGAACATGAGCGAATAAACAAGAATCCCAGAGGGAATGGCCACGAGAGATCAAAATCAGTGTCAGAGAGCAGACAAAGACAAATTGCTGACCAGATTCCGTCACGTTCCTCGTCAGTAGATCTATCTTCTGTGTTTCATCTCCCGGAGGGCATTTCTGATTCTGCACCCAACACTTCTTTGTCTGGGCTGGAGCACTGTGCTAATGTGTTTATAACTGATACCAATGAGAGCTCGAAGCTGGCAAGTAACGGTCAGCACAATAATGGAGAGGCCAAGTCTGTGCCTTTACAAATTGACAATCTTTCGGAAAATGCTTCGCCTCGAGCCTCTGTGAATAGTCAAGATTTGACCAGTGATCAGGAACCAGAGAGTATAGTTGAGAAATCAAGAAAGGTGAAGTCTGTTCGATCATCCTTGGATATTAACCGGAGCAATAGCCGGTTGAGTTTATTCAGTGAAAGAAAAGAGGCTAAGGTGTATCCAAATTCTACACACGACACAACTTTGGAGAGCAAAATCAAGAACTTGGAAAGTAGAGTAAAGAAGCTTGAGGGTGAGTTATGCGAGGCTGCAGCCATTGAAGCAGCTCTCTACTCCGTGGTTGCAGAGCATGGAAGTTCATCAAGTAAAGTCCATGCGCCTGCTAGACGTCTTTTGAGGCTGTATCTTCATGCTTGTAGAGAAACCCATCTCTCAAGAAGAGCCAATGCAGCTGAAAGTGCTGTCTCCGGGTTAGTTCTTGTTGCCAAAGCGTGTGGAAACGATGTCCCCAGATTGACATTTTGGTTGTCAAACACTATCGTTCTGAGGACAATCATTAGTGATACTAGTGCAGAAGAGGAACTGCCTGTTTCTGCTGGTCCTGGACCAAGAAAACAGAAGGCTGAAAGAGAAACCGAGAAACGATCGTCCTTGAAGTGGAAAGATTCCCCTTTGAGCAAAAAGGACATTAAGAGTTTTGGTGCCTGGGATGACCCTGTAACTTTCATAACAGCGCTTGAAAAGGTCGAAGCTTGGATCTTCTCACGCGTCGTAGAATCAATTTGGTGGCAGACTTTGACACCACGTATGCAGTCTTCGGCAGCATCAACTAGAGAGTTTGATAAAGGAAATGGCTCTGCATCAAAGAAAACTTTTGGTAGGACTCCGAGTAGTACGAACCAAGAACTAGGTGACTTCTCATTAGAGCTTTGGAAAAAGGCTTTCAGGGAGGCACACGAACGTTTATGCCCTCTGCGAGGTAGTGGGCATGAATGTGGCTGCTTGCCCATACCTGCGCGTCTGATAATGGAACAGTGTGTGGCTCGGCTAGATGTTGCTATGTTCAATGCTATCCTTCGTGATTCTGATGACAATTTCCCAACAGACCCTGTATCTGATCCCATTGCAGACTTGAGAGTCTTGCCAATTCCTTCTAGAACATCAAGTTTTGGTTCTGGTGCCCAGCTGAAAAACTCGATAGGAAACTGGTCAAGGTGGCTCACTGATCTATTCGGCATTGATGACGAAGATGATGACAGCAGCGATGAGAATAGCTATGTTGAAAAATCGTTCAAGACATTCAATCTTCTCAAGGCGTTAAGCGATCTAATGATGCTTCCAAAAGATATGCTCCTCAACAGTTCTGTGAGAAAAGAGGTTTGCCCGATGTTTGGTGCCCCGTTGATTAAGAGAGTGTTGAATAATTTTGTCCCAGATGAGTTTTGCCCTGACCCAGTTCCTGATGCTGTACTGAAATCTCTTGAATCCGAGGAAGAAGCTGAGAAGAGTATCATCACAAGCTATCCATGCACTGCACCTTCTCCAGTGTACTGTCCACCTTCACGGACTTCAATCTCCACCATCATTGGAAACTTTGGACAGCCTCAAGCGCCGCAGTTAAGCAGAATCAGGTCTTCAATTACAAGAAAAGCGTACACAAGCGATGACGAGCTTGATGAGCTGAGTTCACCGTTGGCTGTTGTTGTTCTTCAACAAGCAGGTTCTAAGAAGATCAATAATGGTGATGCAGATGAGACAATCAGGTATCAACTTCTCAGGGAGTGTTGGATGAACGGCGAATGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
NT-C2

Protein Analysis

921

Amino Acids

101.7

Weight (kDa)

6.02

Isoelectric Point (pI)

48.75

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
NT-C2 PF10358 15 - 161 2.1e-09 N-terminal C2 in EEIG1 and EHBP1 proteins
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 914
AasI GACNNNNNNGTC 1 cut(s) 2099
AatII GACGTC 1 cut(s) 1354
Acc36I ACCTGC 2 cut(s) 1984, 2672
Acc65I GGTACC 1 cut(s) 158
AccB1I GGYRCC 4 cut(s) 158, 1664, 2141, 2357
AccI GTMKAC 1 cut(s) 490
AccII CGCG 2 cut(s) 1731, 1981
AciI CCGC 2 cut(s) 148, 2576
AclI AACGTT 1 cut(s) 1924
AclWI GGATC 3 cut(s) 55, 1727, 2075
AcoI YGGCCR 1 cut(s) 739
AcsI RAATTY 1 cut(s) 1186
AcyI GRCGYC 2 cut(s) 493, 1351
AfaI GTAC 8 cut(s) 45, 160, 383, 467, 1858, 2433, 2513, 2618
AfeI AGCGCT 1 cut(s) 1698
AfiI CCNNNNNNNGG 5 cut(s) 185, 543, 1620, 1940, 2354
AflIII ACRYGT 1 cut(s) 1729
AhlI ACTAGT 1 cut(s) 1529
AjnI CCWGG 2 cut(s) 1564, 1667
Alw21I GWGCWC 3 cut(s) 312, 897, 935
Alw26I GTCTC 4 cut(s) 265, 652, 1432, 2711
AlwI GGATC 3 cut(s) 55, 1727, 2075
AlwNI CAGNNNCTG 2 cut(s) 2072, 2423
Ama87I CYCGRG 2 cut(s) 267, 1023
Aor51HI AGCGCT 1 cut(s) 1698
AoxI GGCC 4 cut(s) 86, 498, 739, 972
ApeKI GCWGC 7 cut(s) 1271, 1274, 1286, 1412, 1784, 1962, 2223
ApoI RAATTY 1 cut(s) 1186
ArsI GACNNNNNNTTYG 2 cut(s) 746, 778
Asp718I GGTACC 1 cut(s) 158
AspLEI GCGC 4 cut(s) 1342, 1699, 1981, 2575
AspS9I GGNCC 3 cut(s) 498, 1562, 1568
AsuC2I CCSGG 3 cut(s) 497, 845, 1432
AsuHPI GGTGA 9 cut(s) 155, 235, 293, 560, 1108, 1268, 1886, 2643, 2717
AvaI CYCGRG 2 cut(s) 267, 1023
AvaII GGWCC 2 cut(s) 1562, 1568
BaeGI GKGCMC 2 cut(s) 2146, 2362
BalI TGGCCA 1 cut(s) 741
BanI GGYRCC 4 cut(s) 158, 1664, 2141, 2357
BanII GRGCYC 2 cut(s) 312, 935
BarI GAAGNNNNNNTAC 2 cut(s) 1762, 1794
BauI CACGAG 1 cut(s) 743
BbsI GAAGAC 3 cut(s) 280, 1770, 2589
Bbv12I GWGCWC 3 cut(s) 312, 897, 935
BbvI GCAGC 7 cut(s) 1258, 1286, 1298, 1424, 1796, 1949, 2235
BccI CCATC 3 cut(s) 614, 1398, 2552
BciT130I CCWGG 2 cut(s) 1566, 1669
BciVI GTATCC 1 cut(s) 1191
BclI TGATCA 1 cut(s) 1057
BcnI CCSGG 3 cut(s) 497, 845, 1432
BcoDI GTCTC 4 cut(s) 265, 652, 1432, 2711
BcuI ACTAGT 1 cut(s) 1529
BfaI CTAG 6 cut(s) 1347, 1530, 1794, 1871, 2012, 2118
BfmI CTRYAG 1 cut(s) 1272
BfoI RGCGCY 2 cut(s) 1700, 2576
BfuAI ACCTGC 2 cut(s) 1984, 2672
BfuI GTATCC 1 cut(s) 1191
BglII AGATCT 1 cut(s) 820
BisI GCNGC 8 cut(s) 1272, 1275, 1287, 1413, 1785, 1963, 2224, 2576
BlsI GCNGC 8 cut(s) 1273, 1276, 1288, 1414, 1786, 1964, 2225, 2577
Bme1390I CCNGG 5 cut(s) 497, 845, 1432, 1566, 1669
Bme18I GGWCC 2 cut(s) 1562, 1568
BmeT110I CYCGRG 2 cut(s) 267, 1023
BmgT120I GGNCC 3 cut(s) 498, 1562, 1568
BmiI GGNNCC 5 cut(s) 160, 1065, 1666, 2143, 2359
BmrFI CCNGG 5 cut(s) 497, 845, 1432, 1566, 1669
BmrI ACTGGG 1 cut(s) 2411
BmsI GCATC 6 cut(s) 23, 1796, 1832, 2286, 2416, 2698
BmuI ACTGGG 1 cut(s) 2411
BpiI GAAGAC 3 cut(s) 280, 1770, 2589
BpmI CTGGAG 2 cut(s) 911, 2490
Bpu10I CCTNAGC 1 cut(s) 1173
BpuEI CTTGAG 5 cut(s) 1271, 1381, 2116, 2258, 2553
BpuMI CCSGG 3 cut(s) 497, 845, 1432
BsaAI YACGTR 1 cut(s) 1769
BsaBI GATNNNNATC 2 cut(s) 37, 754
BsaHI GRCGYC 2 cut(s) 493, 1351
BsaJI CCNNGG 5 cut(s) 83, 1116, 1299, 1668, 2451
BsaWI WCCGGW 2 cut(s) 441, 1128
BsaXI ACNNNNNCTCC 2 cut(s) 611, 641
Bsc4I CCNNNNNNNGG 5 cut(s) 185, 543, 1620, 1940, 2354
Bse118I RCCGGY 1 cut(s) 1140
Bse1I ACTGG 5 cut(s) 501, 1053, 2174, 2417, 2507
Bse3DI GCAATG 1 cut(s) 2085
Bse8I GATNNNNATC 2 cut(s) 37, 754
BseBI CCWGG 2 cut(s) 1566, 1669
BseDI CCNNGG 5 cut(s) 83, 1116, 1299, 1668, 2451
BseGI GGATG 4 cut(s) 535, 1112, 1678, 2757
BseJI GATNNNNATC 2 cut(s) 37, 754
BseLI CCNNNNNNNGG 5 cut(s) 185, 543, 1620, 1940, 2354
BseMI GCAATG 1 cut(s) 2085
BseMII CTCAG 7 cut(s) 110, 467, 585, 1499, 2454, 2636, 2752
BseNI ACTGG 5 cut(s) 501, 1053, 2174, 2417, 2507
BseRI GAGGAG 2 cut(s) 625, 2306
BseSI GKGCMC 2 cut(s) 2146, 2362
BseXI GCAGC 7 cut(s) 1258, 1286, 1298, 1424, 1796, 1949, 2235
BseYI CCCAGC 1 cut(s) 2145
BsgI GTGCAG 3 cut(s) 849, 1554, 2481
Bsh1236I CGCG 2 cut(s) 1731, 1981
Bsh1285I CGRYCG 1 cut(s) 1610
BshFI GGCC 4 cut(s) 88, 500, 741, 974
BshNI GGYRCC 4 cut(s) 158, 1664, 2141, 2357
BsiEI CGRYCG 1 cut(s) 1610
BsiHKAI GWGCWC 3 cut(s) 312, 897, 935
BsiHKCI CYCGRG 2 cut(s) 267, 1023
BsiSI CCGG 6 cut(s) 442, 496, 845, 1129, 1141, 1431
BslFI GGGAC 3 cut(s) 85, 1454, 2378
BslI CCNNNNNNNGG 5 cut(s) 185, 543, 1620, 1940, 2354
BsmAI GTCTC 4 cut(s) 265, 652, 1432, 2711
BsmFI GGGAC 3 cut(s) 85, 1454, 2378
BsmI GAATGC 1 cut(s) 451
BsnI GGCC 4 cut(s) 88, 500, 741, 974
BsoBI CYCGRG 2 cut(s) 267, 1023
Bsp1286I GDGCHC 5 cut(s) 312, 897, 935, 2146, 2362
BspACI CCGC 2 cut(s) 148, 2576
BspANI GGCC 4 cut(s) 88, 500, 741, 974
BspCNI CTCAG 7 cut(s) 109, 466, 586, 1500, 2455, 2637, 2751
BspFNI CGCG 2 cut(s) 1731, 1981
BspHI TCATGA 1 cut(s) 70
BspLI GGNNCC 5 cut(s) 160, 1065, 1666, 2143, 2359
BspMAI CTGCAG 1 cut(s) 1276
BspMI ACCTGC 2 cut(s) 1984, 2672
BspPI GGATC 3 cut(s) 55, 1727, 2075
BspQI GCTCTTC 1 cut(s) 1396
BspT107I GGYRCC 4 cut(s) 158, 1664, 2141, 2357
BsrDI GCAATG 1 cut(s) 2085
BsrFI RCCGGY 1 cut(s) 1140
BsrI ACTGG 5 cut(s) 501, 1053, 2174, 2417, 2507
BssAI RCCGGY 1 cut(s) 1140
BssECI CCNNGG 5 cut(s) 83, 1116, 1299, 1668, 2451
BssNI GRCGYC 2 cut(s) 493, 1351
BssSI CACGAG 1 cut(s) 743
BssT1I CCWWGG 2 cut(s) 83, 1116
Bst2BI CACGAG 1 cut(s) 743
Bst2UI CCWGG 2 cut(s) 1566, 1669
Bst4CI ACNGT 9 cut(s) 386, 428, 646, 899, 953, 1998, 2324, 2516, 2655
Bst6I CTCTTC 5 cut(s) 117, 690, 1396, 1533, 2462
BstACI GRCGYC 2 cut(s) 493, 1351
BstBAI YACGTR 1 cut(s) 1769
BstC8I GCNNGC 3 cut(s) 942, 1344, 1967
BstDSI CCRYGG 1 cut(s) 1299
BstEII GGTNACC 1 cut(s) 143
BstENI CCTNNNNNAGG 1 cut(s) 1938
BstF5I GGATG 4 cut(s) 535, 1112, 1678, 2757
BstFNI CGCG 2 cut(s) 1731, 1981
BstH2I RGCGCY 2 cut(s) 1700, 2576
BstHHI GCGC 4 cut(s) 1342, 1699, 1981, 2575
BstMAI GTCTC 4 cut(s) 265, 652, 1432, 2711
BstMCI CGRYCG 1 cut(s) 1610
BstMWI GCNNNNNNNGC 7 cut(s) 599, 1283, 1412, 1421, 2490, 2572, 2641
BstNI CCWGG 2 cut(s) 1566, 1669
BstPI GGTNACC 1 cut(s) 143
BstSCI CCNGG 5 cut(s) 495, 843, 1430, 1564, 1667
BstSFI CTRYAG 1 cut(s) 1272
BstSLI GKGCMC 2 cut(s) 2146, 2362
BstUI CGCG 2 cut(s) 1731, 1981
BstV1I GCAGC 7 cut(s) 1258, 1286, 1298, 1424, 1796, 1949, 2235
BstV2I GAAGAC 3 cut(s) 280, 1770, 2589
BstX2I RGATCY 2 cut(s) 820, 1719
BstXI CCANNNNNNTGG 1 cut(s) 373
BstYI RGATCY 2 cut(s) 820, 1719
BsuI GTATCC 1 cut(s) 1191
BsuRI GGCC 4 cut(s) 88, 500, 741, 974
BtgI CCRYGG 1 cut(s) 1299
BtgZI GCGATG 2 cut(s) 2241, 2640
BtsCI GGATG 4 cut(s) 535, 1112, 1678, 2757
BtsI GCAGTG 1 cut(s) 2493
BtsIMutI CAGTG 8 cut(s) 765, 895, 1060, 1162, 2003, 2184, 2493, 2514
BveI ACCTGC 2 cut(s) 1984, 2672
Cac8I GCNNGC 3 cut(s) 942, 1344, 1967
CaiI CAGNNNCTG 2 cut(s) 2072, 2423
CciI TCATGA 1 cut(s) 70
CfoI GCGC 4 cut(s) 1342, 1699, 1981, 2575
Cfr10I RCCGGY 1 cut(s) 1140
Cfr13I GGNCC 3 cut(s) 498, 1562, 1568
CseI GACGC 3 cut(s) 501, 1720, 1970
Csp6I GTAC 8 cut(s) 44, 159, 382, 466, 1857, 2432, 2512, 2617
CspCI CAANNNNNGTGG 6 cut(s) 151, 186, 1438, 1473, 2530, 2565
CviAII CATG 7 cut(s) 71, 707, 1313, 1337, 1373, 1952, 2490
CviQI GTAC 8 cut(s) 44, 159, 382, 466, 1857, 2432, 2512, 2617
DrdI GACNNNNNNGTC 1 cut(s) 2099
DseDI GACNNNNNNGTC 1 cut(s) 2099
EaeI YGGCCR 1 cut(s) 739
Eam1104I CTCTTC 5 cut(s) 117, 690, 1396, 1533, 2462
EarI CTCTTC 5 cut(s) 117, 690, 1396, 1533, 2462
Ecl136II GAGCTC 2 cut(s) 310, 933
Eco130I CCWWGG 2 cut(s) 83, 1116
Eco24I GRGCYC 2 cut(s) 312, 935
Eco47I GGWCC 2 cut(s) 1562, 1568
Eco47III AGCGCT 1 cut(s) 1698
Eco53kI GAGCTC 2 cut(s) 310, 933
Eco88I CYCGRG 2 cut(s) 267, 1023
Eco91I GGTNACC 1 cut(s) 143
EcoICRI GAGCTC 2 cut(s) 310, 933
EcoNI CCTNNNNNAGG 1 cut(s) 1938
EcoO65I GGTNACC 1 cut(s) 143
EcoRII CCWGG 2 cut(s) 1564, 1667
EcoT14I CCWWGG 2 cut(s) 83, 1116
EcoT38I GRGCYC 2 cut(s) 312, 935
ErhI CCWWGG 2 cut(s) 83, 1116
FaeI CATG 7 cut(s) 74, 710, 1316, 1340, 1376, 1955, 2493
FalI AAGNNNNNCTT 2 cut(s) 287, 319
FaqI GGGAC 3 cut(s) 85, 1454, 2378
FatI CATG 7 cut(s) 70, 706, 1312, 1336, 1372, 1951, 2489
FbaI TGATCA 1 cut(s) 1057
FblI GTMKAC 1 cut(s) 490
Fnu4HI GCNGC 8 cut(s) 1272, 1275, 1287, 1413, 1785, 1963, 2224, 2576
FokI GGATG 3 cut(s) 542, 1099, 1685
FriOI GRGCYC 2 cut(s) 312, 935
Fsp4HI GCNGC 8 cut(s) 1272, 1275, 1287, 1413, 1785, 1963, 2224, 2576
FspBI CTAG 6 cut(s) 1347, 1530, 1794, 1871, 2012, 2118
GlaI GCGC 4 cut(s) 1341, 1698, 1980, 2574
GluI GCNGC 8 cut(s) 1272, 1275, 1287, 1413, 1785, 1963, 2224, 2576
GsaI CCCAGC 1 cut(s) 2149
GsuI CTGGAG 2 cut(s) 911, 2490
HaeII RGCGCY 2 cut(s) 1700, 2576
HaeIII GGCC 4 cut(s) 88, 500, 741, 974
HapII CCGG 6 cut(s) 442, 496, 845, 1129, 1141, 1431
HgaI GACGC 3 cut(s) 501, 1720, 1970
HhaI GCGC 4 cut(s) 1342, 1699, 1981, 2575
Hin1I GRCGYC 2 cut(s) 493, 1351
Hin1II CATG 7 cut(s) 74, 710, 1316, 1340, 1376, 1955, 2493
Hin6I GCGC 4 cut(s) 1340, 1697, 1979, 2573
HinP1I GCGC 4 cut(s) 1340, 1697, 1979, 2573
HindIII AAGCTT 3 cut(s) 233, 1247, 1713
HpaII CCGG 6 cut(s) 442, 496, 845, 1129, 1141, 1431
HphI GGTGA 9 cut(s) 155, 235, 293, 560, 1108, 1268, 1886, 2643, 2717
Hpy166II GTNNAC 7 cut(s) 382, 431, 491, 2512, 2519, 2619, 2651
Hpy188I TCNGA 9 cut(s) 766, 859, 1009, 1509, 1851, 1986, 2050, 2080, 2452
Hpy8I GTNNAC 7 cut(s) 382, 431, 491, 2512, 2519, 2619, 2651
Hpy99I CGWCG 2 cut(s) 620, 1736
HpyCH4III ACNGT 9 cut(s) 386, 428, 646, 899, 953, 1998, 2324, 2516, 2655
HpyCH4IV ACGT 5 cut(s) 300, 805, 1351, 1768, 1924
HpyF10VI GCNNNNNNNGC 7 cut(s) 599, 1283, 1412, 1421, 2490, 2572, 2641
HpySE526I ACGT 5 cut(s) 300, 805, 1351, 1768, 1924
Hsp92I GRCGYC 2 cut(s) 493, 1351
Hsp92II CATG 7 cut(s) 74, 710, 1316, 1340, 1376, 1955, 2493
HspAI GCGC 4 cut(s) 1340, 1697, 1979, 2573
KpnI GGTACC 1 cut(s) 162
Ksp22I TGATCA 1 cut(s) 1057
LguI GCTCTTC 1 cut(s) 1396
LmnI GCTCC 4 cut(s) 181, 892, 1131, 2319
Lsp1109I GCAGC 7 cut(s) 1258, 1286, 1298, 1424, 1796, 1949, 2235
LweI GCATC 6 cut(s) 23, 1796, 1832, 2286, 2416, 2698
MaeI CTAG 6 cut(s) 1347, 1530, 1794, 1871, 2012, 2118
MaeII ACGT 5 cut(s) 300, 805, 1351, 1768, 1924
MaeIII GTNAC 5 cut(s) 143, 801, 947, 1681, 1874
MflI RGATCY 2 cut(s) 820, 1719
MhlI GDGCHC 5 cut(s) 312, 897, 935, 2146, 2362
MlsI TGGCCA 1 cut(s) 741
MluCI AATT 9 cut(s) 151, 783, 993, 1186, 1743, 2056, 2109, 2386, 2601
MluI ACGCGT 1 cut(s) 1729
MluNI TGGCCA 1 cut(s) 741
MlyI GAGTC 3 cut(s) 674, 1840, 2109
MmeI TCCRAC 1 cut(s) 2729
Mox20I TGGCCA 1 cut(s) 741
MscI TGGCCA 1 cut(s) 741
MseI TTAA 7 cut(s) 14, 231, 1125, 1653, 2282, 2370, 2582
MslI CAYNNNNRTG 3 cut(s) 69, 963, 1956
Msp20I TGGCCA 1 cut(s) 741
MspA1I CMGCKG 2 cut(s) 1415, 2149
MspI CCGG 6 cut(s) 442, 496, 845, 1129, 1141, 1431
MspR9I CCNGG 5 cut(s) 497, 845, 1432, 1566, 1669
Mva1269I GAATGC 1 cut(s) 451
MvaI CCWGG 2 cut(s) 1566, 1669
MvnI CGCG 2 cut(s) 1731, 1981
MwoI GCNNNNNNNGC 7 cut(s) 599, 1283, 1412, 1421, 2490, 2572, 2641
NciI CCSGG 3 cut(s) 497, 845, 1432
NlaIII CATG 7 cut(s) 74, 710, 1316, 1340, 1376, 1955, 2493
NlaIV GGNNCC 5 cut(s) 160, 1065, 1666, 2143, 2359
NmeAIII GCCGAG 1 cut(s) 1987
NmuCI GTSAC 3 cut(s) 143, 801, 1874
PaeR7I CTCGAG 1 cut(s) 1023
PagI TCATGA 1 cut(s) 70
PciSI GCTCTTC 1 cut(s) 1396
PcsI WCGNNNNNNNCGW 1 cut(s) 219
PctI GAATGC 1 cut(s) 451
PfoI TCCNGGA 2 cut(s) 843, 1564
PkrI GCNGC 8 cut(s) 1273, 1276, 1288, 1414, 1786, 1964, 2225, 2577
Ple19I CGATCG 1 cut(s) 1610
PleI GAGTC 3 cut(s) 673, 1840, 2108
PpsI GAGTC 3 cut(s) 673, 1840, 2108
Ppu21I YACGTR 1 cut(s) 1769
PsiI TTATAA 1 cut(s) 914
Psp124BI GAGCTC 2 cut(s) 312, 935
Psp1406I AACGTT 1 cut(s) 1924
Psp6I CCWGG 2 cut(s) 1564, 1667
PspEI GGTNACC 1 cut(s) 143
PspFI CCCAGC 1 cut(s) 2145
PspGI CCWGG 2 cut(s) 1564, 1667
PspN4I GGNNCC 5 cut(s) 160, 1065, 1666, 2143, 2359
PspPI GGNCC 3 cut(s) 498, 1562, 1568
PspXI VCTCGAGB 1 cut(s) 1023
PstI CTGCAG 1 cut(s) 1276
PstNI CAGNNNCTG 2 cut(s) 2072, 2423
PsuI RGATCY 2 cut(s) 820, 1719
PvuI CGATCG 1 cut(s) 1610
PvuII CAGCTG 2 cut(s) 1415, 2149
RsaI GTAC 8 cut(s) 45, 160, 383, 467, 1858, 2433, 2513, 2618
RsaNI GTAC 8 cut(s) 44, 159, 382, 466, 1857, 2432, 2512, 2617
RseI CAYNNNNRTG 3 cut(s) 69, 963, 1956
SacI GAGCTC 2 cut(s) 312, 935
SapI GCTCTTC 1 cut(s) 1396
SaqAI TTAA 7 cut(s) 14, 231, 1125, 1653, 2282, 2370, 2582
SatI GCNGC 8 cut(s) 1272, 1275, 1287, 1413, 1785, 1963, 2224, 2576
Sau96I GGNCC 3 cut(s) 498, 1562, 1568
SchI GAGTC 3 cut(s) 674, 1840, 2109
ScrFI CCNGG 5 cut(s) 497, 845, 1432, 1566, 1669
SduI GDGCHC 5 cut(s) 312, 897, 935, 2146, 2362
SfaNI GCATC 6 cut(s) 23, 1796, 1832, 2286, 2416, 2698
SfcI CTRYAG 1 cut(s) 1272
Sfr274I CTCGAG 1 cut(s) 1023
SinI GGWCC 2 cut(s) 1562, 1568
SlaI CTCGAG 1 cut(s) 1023
SmiMI CAYNNNNRTG 3 cut(s) 69, 963, 1956
SmlI CTYRAG 6 cut(s) 1023, 1250, 1396, 2095, 2273, 2568
SmoI CTYRAG 6 cut(s) 1023, 1250, 1396, 2095, 2273, 2568
SpeI ACTAGT 1 cut(s) 1529
Sse9I AATT 9 cut(s) 151, 783, 993, 1186, 1743, 2056, 2109, 2386, 2601
SsiI CCGC 2 cut(s) 148, 2576
SspMI CTAG 6 cut(s) 1347, 1530, 1794, 1871, 2012, 2118
SstI GAGCTC 2 cut(s) 312, 935
StyD4I CCNGG 5 cut(s) 495, 843, 1430, 1564, 1667
StyI CCWWGG 2 cut(s) 83, 1116
TaaI ACNGT 9 cut(s) 386, 428, 646, 899, 953, 1998, 2324, 2516, 2655
TaiI ACGT 5 cut(s) 303, 808, 1354, 1771, 1927
TaqI TCGA 7 cut(s) 106, 213, 935, 1024, 1108, 1710, 2159
TasI AATT 9 cut(s) 151, 783, 993, 1186, 1743, 2056, 2109, 2386, 2601
TatI WGTACW 2 cut(s) 2431, 2511
TauI GCSGC 1 cut(s) 2578
Tru1I TTAA 7 cut(s) 14, 231, 1125, 1653, 2282, 2370, 2582
Tru9I TTAA 7 cut(s) 14, 231, 1125, 1653, 2282, 2370, 2582
TscAI CASTG 8 cut(s) 765, 902, 1060, 1162, 2003, 2191, 2500, 2514
TseFI GTSAC 3 cut(s) 143, 801, 1874
TseI GCWGC 7 cut(s) 1271, 1274, 1286, 1412, 1784, 1962, 2223
Tsp45I GTSAC 3 cut(s) 143, 801, 1874
TspGWI ACGGA 3 cut(s) 789, 1288, 2542
TspRI CASTG 8 cut(s) 765, 902, 1060, 1162, 2003, 2191, 2500, 2514
VpaK11BI GGWCC 2 cut(s) 1562, 1568
XagI CCTNNNNNAGG 1 cut(s) 1938
XapI RAATTY 1 cut(s) 1186
XbaI TCTAGA 1 cut(s) 2117
XcmI CCANNNNNNNNNTGG 2 cut(s) 137, 370
XhoI CTCGAG 1 cut(s) 1023
XmiI GTMKAC 1 cut(s) 490
XspI CTAG 6 cut(s) 1347, 1530, 1794, 1871, 2012, 2118
ZraI GACGTC 1 cut(s) 1352
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.