RchiOBHm_Chr2g0175091

N-terminal C2 in EEIG1 and EHBP1 proteins

Basic Information

Type: gene
Biological Identity
rosa_chinensis
2
Physical Location & Seq
Forward (+)
87455854 .. 87457724
1871 bp
Loading structure...
UTR
Exon/CDS
Intron
PRQ54218

Sequence Viewer

Length: 1227 bp
ATGAATGGAGTTATTGTAAGCAATGAGAAATTAAAGCCTGTCAAGTCTGTTAGGTCAGTTGCTGACTTAAGTAAGAATACATTATCTAGGAATGATCAGCATGTAGAGGTAAAGGATGATGTTCAGGGAGATACGCAGAAGAGTGCAGATGTTGCAGGAAACCTCAGAGTTAAGGAAAGGAAAGAGGCGAAGGTGTATCCCAAGGATACAAGAAGTGTCATTTTAGAAAGCAAGGTTAATCAGTTGGAGCACAGAATAAAGATGCTTGAGGGAGAGCTAAGAGAAGCTGCAGCTGTTGAGTCTGCTCTTTATTCAGTAGTTGCTGAGCATGGAAGTTCCATGAGTAAGGTCCATGCTCCAGCTCGGCGCCTTTCTAGGTTGTATCTTCATGCTTGTGGAGAAACTTCACGTTCTAGGAGAGCCAGTGCAGCTAGAAGTGTTGTTTCAGGACTAGTTTTGGTTGCAAAAGCATGTGGGAATGATGTTCCAAGGCTAACATTTTGGCTTTCAAACTCAATTGTCTTGAGAACAATTATAAGCCAGGCTACTGGGGACCCTGAACTTCCCAAGTCTGCCAGGTCTTCTATTGACAGAAATGGTGCTGCAAAAGTTAAACATAAGGCTTCATCTCCATTAAAATGGGAGGCTCCATCCTCTGGGAAAAAACAAGGGATGAAACTATTGAACGGAAGTTTTGGTGACTGGGAGAACCCAAATTCGTTTATGTCCACACTGGAGAAGATTGAATCATGGATCTTCTCCCGAATAGTTGAATCTATCTGGTGGCAGACTTTGACACCACATATGCAGTCGGTTGCTGCCAAGGCAATTGATGAAAATATTGGTTCAGTGTCACAAAAGAATTATAGAAGGACATCTAGTTCAGTTGATCAAGAGCAAAGTGACTTTTCATTAGACCTTTGGAAGAAGGCTTTCAGGGATGCTTGTGAAAGACTTTGTCCAGTAAGAGCTGGTGGGCATGAATGTGGCTGCTTGCCTTTGTTGTCTAGATTGGTCATGGAGCAATCGGTGGCTAGATTAGATGTGGCAATGTTCAATGCCATTCTCCGTGAATCTCCTGACGAGATCCCCAGTGACCCTGTGTCCGATCCCATCAGTGATTTGAAGGTTCTTCCAATTCCAGCTGGGAAATCTAGTTTTGGGGCAGGTGCACAGCTGAAGAGTGCGGTAAGCCAATTCGAATTGTATCTTCCAACCTATTTGTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families

Protein Analysis

408

Amino Acids

44.86

Weight (kDa)

9.23

Isoelectric Point (pI)

48.96

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 536
AarI CACCTGC 1 cut(s) 1157
Acc36I ACCTGC 1 cut(s) 1157
AccB1I GGYRCC 1 cut(s) 366
AccB7I CCANNNNNTGG 1 cut(s) 656
AciI CCGC 1 cut(s) 1187
AclWI GGATC 3 cut(s) 761, 1081, 1103
AcsI RAATTY 1 cut(s) 715
AcuI CTGAAG 1 cut(s) 1199
AcyI GRCGYC 1 cut(s) 367
AfiI CCNNNNNNNGG 1 cut(s) 656
AflII CTTAAG 1 cut(s) 67
AgsI TTSAA 6 cut(s) 510, 685, 746, 773, 1057, 1126
AhdI GACNNNNNGTC 1 cut(s) 1102
AhlI ACTAGT 1 cut(s) 451
AjnI CCWGG 2 cut(s) 540, 575
AloI GAACNNNNNNTCC 2 cut(s) 865, 897
AluBI AGCT 8 cut(s) 277, 287, 293, 362, 431, 971, 1145, 1177
AluI AGCT 8 cut(s) 277, 287, 293, 362, 431, 971, 1145, 1177
Alw21I GWGCWC 2 cut(s) 252, 1174
Alw44I GTGCAC 1 cut(s) 1170
AlwI GGATC 3 cut(s) 761, 1081, 1103
AlwNI CAGNNNCTG 1 cut(s) 62
ApaLI GTGCAC 1 cut(s) 1170
ApeKI GCWGC 6 cut(s) 287, 290, 428, 602, 818, 990
ApoI RAATTY 1 cut(s) 715
Asp700I GAANNNNTTC 1 cut(s) 932
AspLEI GCGC 1 cut(s) 369
AspS9I GGNCC 2 cut(s) 349, 553
AsuHPI GGTGA 1 cut(s) 710
AsuII TTCGAA 1 cut(s) 1200
AvaII GGWCC 2 cut(s) 349, 553
BaeGI GKGCMC 1 cut(s) 1174
BanI GGYRCC 1 cut(s) 366
BbsI GAAGAC 1 cut(s) 573
Bbv12I GWGCWC 2 cut(s) 252, 1174
BbvI GCAGC 6 cut(s) 274, 302, 440, 589, 805, 977
BccI CCATC 2 cut(s) 658, 1121
BciT130I CCWGG 2 cut(s) 542, 577
BciVI GTATCC 2 cut(s) 199, 207
BclI TGATCA 2 cut(s) 94, 889
BcuI ACTAGT 1 cut(s) 451
BfaI CTAG 9 cut(s) 87, 375, 414, 432, 452, 879, 1008, 1035, 1155
BfmI CTRYAG 1 cut(s) 288
BfoI RGCGCY 1 cut(s) 370
BfrI CTTAAG 1 cut(s) 67
BfuAI ACCTGC 1 cut(s) 1157
BfuI GTATCC 2 cut(s) 199, 207
BisI GCNGC 6 cut(s) 288, 291, 429, 603, 819, 991
BlpI GCTNAGC 1 cut(s) 324
BlsI GCNGC 6 cut(s) 289, 292, 430, 604, 820, 992
Bme1390I CCNGG 2 cut(s) 542, 577
Bme18I GGWCC 2 cut(s) 349, 553
BmeRI GACNNNNNGTC 1 cut(s) 1102
BmgT120I GGNCC 2 cut(s) 349, 553
BmiI GGNNCC 4 cut(s) 368, 554, 555, 648
BmrFI CCNGG 2 cut(s) 542, 577
BmrI ACTGGG 3 cut(s) 558, 712, 1086
BmsI GCATC 2 cut(s) 252, 931
BmuI ACTGGG 3 cut(s) 558, 712, 1086
BpiI GAAGAC 1 cut(s) 573
BpmI CTGGAG 2 cut(s) 342, 755
Bpu1102I GCTNAGC 1 cut(s) 324
Bpu14I TTCGAA 1 cut(s) 1200
BpuEI CTTGAG 2 cut(s) 287, 544
BsaHI GRCGYC 1 cut(s) 367
BsaJI CCNNGG 3 cut(s) 201, 488, 822
BsaXI ACNNNNNCTCC 3 cut(s) 30, 409, 439
Bsc4I CCNNNNNNNGG 1 cut(s) 656
Bse1I ACTGG 6 cut(s) 423, 553, 707, 738, 962, 1092
Bse3DI GCAATG 2 cut(s) 28, 1056
BseBI CCWGG 2 cut(s) 542, 577
BseDI CCNNGG 3 cut(s) 201, 488, 822
BseGI GGATG 4 cut(s) 121, 650, 678, 946
BseLI CCNNNNNNNGG 1 cut(s) 656
BseMI GCAATG 2 cut(s) 28, 1056
BseMII CTCAG 2 cut(s) 178, 315
BseNI ACTGG 6 cut(s) 423, 553, 707, 738, 962, 1092
BseSI GKGCMC 1 cut(s) 1174
BseXI GCAGC 6 cut(s) 274, 302, 440, 589, 805, 977
BseYI CCCAGC 1 cut(s) 1145
BsgI GTGCAG 2 cut(s) 165, 447
BshNI GGYRCC 1 cut(s) 366
BsiHKAI GWGCWC 2 cut(s) 252, 1174
BslFI GGGAC 1 cut(s) 566
BslI CCNNNNNNNGG 1 cut(s) 656
BsmFI GGGAC 1 cut(s) 566
Bsp119I TTCGAA 1 cut(s) 1200
Bsp1286I GDGCHC 2 cut(s) 252, 1174
Bsp143I GATC 5 cut(s) 94, 753, 889, 1086, 1108
Bsp1720I GCTNAGC 1 cut(s) 324
BspACI CCGC 1 cut(s) 1187
BspCNI CTCAG 2 cut(s) 177, 316
BspLI GGNNCC 4 cut(s) 368, 554, 555, 648
BspMAI CTGCAG 1 cut(s) 292
BspMI ACCTGC 1 cut(s) 1157
BspPI GGATC 3 cut(s) 761, 1081, 1103
BspT104I TTCGAA 1 cut(s) 1200
BspT107I GGYRCC 1 cut(s) 366
BspTI CTTAAG 1 cut(s) 67
BsrDI GCAATG 2 cut(s) 28, 1056
BsrI ACTGG 6 cut(s) 423, 553, 707, 738, 962, 1092
BssECI CCNNGG 3 cut(s) 201, 488, 822
BssMI GATC 5 cut(s) 94, 753, 889, 1086, 1108
BssNI GRCGYC 1 cut(s) 367
BssT1I CCWWGG 3 cut(s) 201, 488, 822
Bst2UI CCWGG 2 cut(s) 542, 577
Bst6I CTCTTC 2 cut(s) 134, 1175
BstACI GRCGYC 1 cut(s) 367
BstAFI CTTAAG 1 cut(s) 67
BstAPI GCANNNNNTGC 1 cut(s) 152
BstBI TTCGAA 1 cut(s) 1200
BstC8I GCNNGC 1 cut(s) 995
BstDEI CTNAG 3 cut(s) 164, 278, 324
BstF5I GGATG 4 cut(s) 121, 650, 678, 946
BstH2I RGCGCY 1 cut(s) 370
BstHHI GCGC 1 cut(s) 369
BstKTI GATC 5 cut(s) 97, 756, 892, 1089, 1111
BstMBI GATC 5 cut(s) 94, 753, 889, 1086, 1108
BstMWI GCNNNNNNNGC 3 cut(s) 152, 428, 824
BstNI CCWGG 2 cut(s) 542, 577
BstNSI RCATGY 2 cut(s) 104, 474
BstSCI CCNGG 2 cut(s) 540, 575
BstSFI CTRYAG 1 cut(s) 288
BstSLI GKGCMC 1 cut(s) 1174
BstV1I GCAGC 6 cut(s) 274, 302, 440, 589, 805, 977
BstV2I GAAGAC 1 cut(s) 573
BstX2I RGATCY 2 cut(s) 753, 1086
BstXI CCANNNNNNTGG 2 cut(s) 548, 639
BstYI RGATCY 2 cut(s) 753, 1086
BsuI GTATCC 2 cut(s) 199, 207
BtsCI GGATG 4 cut(s) 121, 650, 678, 946
BtsIMutI CAGTG 5 cut(s) 430, 731, 855, 1099, 1123
BveI ACCTGC 1 cut(s) 1157
Cac8I GCNNGC 1 cut(s) 995
CaiI CAGNNNCTG 1 cut(s) 62
CfoI GCGC 1 cut(s) 369
Cfr13I GGNCC 2 cut(s) 349, 553
CviAII CATG 9 cut(s) 101, 329, 340, 353, 389, 471, 750, 980, 1018
DdeI CTNAG 3 cut(s) 164, 278, 324
DinI GGCGCC 1 cut(s) 368
DpnI GATC 5 cut(s) 96, 755, 891, 1088, 1110
DpnII GATC 5 cut(s) 94, 753, 889, 1086, 1108
DriI GACNNNNNGTC 1 cut(s) 1102
Eam1104I CTCTTC 2 cut(s) 134, 1175
Eam1105I GACNNNNNGTC 1 cut(s) 1102
EarI CTCTTC 2 cut(s) 134, 1175
Eco130I CCWWGG 3 cut(s) 201, 488, 822
Eco47I GGWCC 2 cut(s) 349, 553
Eco57I CTGAAG 1 cut(s) 1199
EcoO109I RGGNCCY 1 cut(s) 553
EcoRII CCWGG 2 cut(s) 540, 575
EcoT14I CCWWGG 3 cut(s) 201, 488, 822
EgeI GGCGCC 1 cut(s) 368
EheI GGCGCC 1 cut(s) 368
ErhI CCWWGG 3 cut(s) 201, 488, 822
FaeI CATG 9 cut(s) 104, 332, 343, 356, 392, 474, 753, 983, 1021
FaqI GGGAC 1 cut(s) 566
FatI CATG 9 cut(s) 100, 328, 339, 352, 388, 470, 749, 979, 1017
FauNDI CATATG 1 cut(s) 804
FbaI TGATCA 2 cut(s) 94, 889
Fnu4HI GCNGC 6 cut(s) 288, 291, 429, 603, 819, 991
FokI GGATG 4 cut(s) 128, 637, 685, 953
Fsp4HI GCNGC 6 cut(s) 288, 291, 429, 603, 819, 991
FspBI CTAG 9 cut(s) 87, 375, 414, 432, 452, 879, 1008, 1035, 1155
GlaI GCGC 1 cut(s) 368
GluI GCNGC 6 cut(s) 288, 291, 429, 603, 819, 991
GsaI CCCAGC 1 cut(s) 1149
GsuI CTGGAG 2 cut(s) 342, 755
HaeII RGCGCY 1 cut(s) 370
HhaI GCGC 1 cut(s) 369
Hin1I GRCGYC 1 cut(s) 367
Hin1II CATG 9 cut(s) 104, 332, 343, 356, 392, 474, 753, 983, 1021
Hin6I GCGC 1 cut(s) 367
HinP1I GCGC 1 cut(s) 367
HinfI GANTC 4 cut(s) 299, 746, 773, 1073
HphI GGTGA 1 cut(s) 710
Hpy166II GTNNAC 2 cut(s) 729, 1172
Hpy188I TCNGA 2 cut(s) 167, 1108
Hpy188III TCNNGA 6 cut(s) 447, 523, 762, 893, 1008, 1079
Hpy8I GTNNAC 2 cut(s) 729, 1172
HpyAV CCTTC 4 cut(s) 184, 864, 922, 1120
HpyCH4IV ACGT 1 cut(s) 409
HpyCH4V TGCA 8 cut(s) 146, 155, 290, 428, 464, 605, 808, 1172
HpyF10VI GCNNNNNNNGC 3 cut(s) 152, 428, 824
HpyF3I CTNAG 3 cut(s) 164, 278, 324
HpySE526I ACGT 1 cut(s) 409
Hsp92I GRCGYC 1 cut(s) 367
Hsp92II CATG 9 cut(s) 104, 332, 343, 356, 392, 474, 753, 983, 1021
HspAI GCGC 1 cut(s) 367
KasI GGCGCC 1 cut(s) 366
KflI GGGWCCC 1 cut(s) 553
Ksp22I TGATCA 2 cut(s) 94, 889
Kzo9I GATC 5 cut(s) 94, 753, 889, 1086, 1108
LmnI GCTCC 4 cut(s) 247, 361, 652, 1021
Lsp1109I GCAGC 6 cut(s) 274, 302, 440, 589, 805, 977
LweI GCATC 2 cut(s) 252, 931
MaeI CTAG 9 cut(s) 87, 375, 414, 432, 452, 879, 1008, 1035, 1155
MaeII ACGT 1 cut(s) 409
MaeIII GTNAC 4 cut(s) 698, 852, 902, 1094
MalI GATC 5 cut(s) 96, 755, 891, 1088, 1110
MboI GATC 5 cut(s) 94, 753, 889, 1086, 1108
MboII GAAGA 9 cut(s) 151, 377, 573, 748, 751, 937, 1124, 1192, 1202
MfeI CAATTG 2 cut(s) 516, 828
MflI RGATCY 2 cut(s) 753, 1086
MhlI GDGCHC 2 cut(s) 252, 1174
MluCI AATT 9 cut(s) 29, 516, 531, 715, 828, 862, 1137, 1196, 1202
Mly113I GGCGCC 1 cut(s) 367
MlyI GAGTC 1 cut(s) 308
MmeI TCCRAC 1 cut(s) 225
MnlI CCTC 6 cut(s) 100, 173, 178, 262, 637, 664
MroXI GAANNNNTTC 1 cut(s) 932
MseI TTAA 6 cut(s) 32, 68, 171, 237, 612, 635
MslI CAYNNNNRTG 3 cut(s) 393, 637, 984
MspA1I CMGCKG 3 cut(s) 293, 1145, 1177
MspCI CTTAAG 1 cut(s) 67
MspR9I CCNGG 2 cut(s) 542, 577
MunI CAATTG 2 cut(s) 516, 828
MvaI CCWGG 2 cut(s) 542, 577
MwoI GCNNNNNNNGC 3 cut(s) 152, 428, 824
NarI GGCGCC 1 cut(s) 367
NdeI CATATG 1 cut(s) 804
NdeII GATC 5 cut(s) 94, 753, 889, 1086, 1108
NlaIII CATG 9 cut(s) 104, 332, 343, 356, 392, 474, 753, 983, 1021
NlaIV GGNNCC 4 cut(s) 368, 554, 555, 648
NmeAIII GCCGAG 1 cut(s) 343
NmuCI GTSAC 4 cut(s) 698, 852, 902, 1094
NspI RCATGY 2 cut(s) 104, 474
NspV TTCGAA 1 cut(s) 1200
PaqCI CACCTGC 1 cut(s) 1157
PdmI GAANNNNTTC 1 cut(s) 932
PfeI GAWTC 3 cut(s) 746, 773, 1073
PflFI GACNNNGTC 1 cut(s) 957
PflMI CCANNNNNTGG 1 cut(s) 656
PkrI GCNGC 6 cut(s) 289, 292, 430, 604, 820, 992
PleI GAGTC 1 cut(s) 307
PluTI GGCGCC 1 cut(s) 370
PpsI GAGTC 1 cut(s) 307
PpuMI RGGWCCY 1 cut(s) 553
PsiI TTATAA 1 cut(s) 536
Psp5II RGGWCCY 1 cut(s) 553
Psp6I CCWGG 2 cut(s) 540, 575
PspFI CCCAGC 1 cut(s) 1145
PspGI CCWGG 2 cut(s) 540, 575
PspN4I GGNNCC 4 cut(s) 368, 554, 555, 648
PspPI GGNCC 2 cut(s) 349, 553
PspPPI RGGWCCY 1 cut(s) 553
PstI CTGCAG 1 cut(s) 292
PstNI CAGNNNCTG 1 cut(s) 62
PsuI RGATCY 2 cut(s) 753, 1086
PsyI GACNNNGTC 1 cut(s) 957
PvuII CAGCTG 3 cut(s) 293, 1145, 1177
RseI CAYNNNNRTG 3 cut(s) 393, 637, 984
SaqAI TTAA 6 cut(s) 32, 68, 171, 237, 612, 635
SatI GCNGC 6 cut(s) 288, 291, 429, 603, 819, 991
Sau3AI GATC 5 cut(s) 94, 753, 889, 1086, 1108
Sau96I GGNCC 2 cut(s) 349, 553
SchI GAGTC 1 cut(s) 308
ScrFI CCNGG 2 cut(s) 542, 577
SduI GDGCHC 2 cut(s) 252, 1174
SfaNI GCATC 2 cut(s) 252, 931
SfcI CTRYAG 1 cut(s) 288
SfoI GGCGCC 1 cut(s) 368
SfuI TTCGAA 1 cut(s) 1200
SinI GGWCC 2 cut(s) 349, 553
SmiMI CAYNNNNRTG 3 cut(s) 393, 637, 984
SmlI CTYRAG 3 cut(s) 67, 266, 523
SmoI CTYRAG 3 cut(s) 67, 266, 523
SpeI ACTAGT 1 cut(s) 451
Sse9I AATT 9 cut(s) 29, 516, 531, 715, 828, 862, 1137, 1196, 1202
SsiI CCGC 1 cut(s) 1187
SspDI GGCGCC 1 cut(s) 366
SspI AATATT 1 cut(s) 841
SspMI CTAG 9 cut(s) 87, 375, 414, 432, 452, 879, 1008, 1035, 1155
StyD4I CCNGG 2 cut(s) 540, 575
StyI CCWWGG 3 cut(s) 201, 488, 822
TaiI ACGT 1 cut(s) 412
TaqI TCGA 1 cut(s) 1200
TasI AATT 9 cut(s) 29, 516, 531, 715, 828, 862, 1137, 1196, 1202
TfiI GAWTC 3 cut(s) 746, 773, 1073
Tru1I TTAA 6 cut(s) 32, 68, 171, 237, 612, 635
Tru9I TTAA 6 cut(s) 32, 68, 171, 237, 612, 635
TscAI CASTG 5 cut(s) 430, 738, 855, 1099, 1123
TseFI GTSAC 4 cut(s) 698, 852, 902, 1094
TseI GCWGC 6 cut(s) 287, 290, 428, 602, 818, 990
Tsp45I GTSAC 4 cut(s) 698, 852, 902, 1094
TspDTI ATGAA 7 cut(s) 17, 377, 615, 689, 849, 900, 996
TspGWI ACGGA 2 cut(s) 702, 1058
TspRI CASTG 5 cut(s) 430, 738, 855, 1099, 1123
Tth111I GACNNNGTC 1 cut(s) 957
Van91I CCANNNNNTGG 1 cut(s) 656
Vha464I CTTAAG 1 cut(s) 67
VneI GTGCAC 1 cut(s) 1170
VpaK11BI GGWCC 2 cut(s) 349, 553
XapI RAATTY 1 cut(s) 715
XbaI TCTAGA 1 cut(s) 1007
XceI RCATGY 2 cut(s) 104, 474
XmnI GAANNNNTTC 1 cut(s) 932
XspI CTAG 9 cut(s) 87, 375, 414, 432, 452, 879, 1008, 1035, 1155
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.