Rw2G054240

N-terminal C2 in EEIG1 and EHBP1 proteins

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_wichuraiana
Chr2
OG0004680
Physical Location & Seq
Forward (+)
81909958 .. 81915709
5752 bp
Loading structure...
UTR
Exon/CDS
Intron
Rw2G054240.1

Sequence Viewer

Length: 3159 bp
ATGGTTATAGGGTTAAAGGCGAAGAATCACAGAGGTCCTACTGTTCAGATTGATTATCTAGTCCATATTCTCGAGATTAAGCCTTGGCCGCCGTCACAGTCACTTAAGTCGCTGCGTTCCGTGTTCATTCAATGGGAGAATGGAGACCGTAGTTCTGGTTCGACCAATGCTGTTGTCCCGTCGATTGGTTCGGTTGACGGTGAGGGAAGAATTGAGTTCAATGAGTCTTTTAAGTTACCTGTGACTTTGCTGAGGGATGTGGCTGTAAAAGGCGGTGTAAAAGGAGGTGGTGAAGGTGATGCATTTTTGAAGAATTGCTTAGAGTTAAACTTGTATGAGCCTCGGAGGGATAAGACTGCGAAAGGTCAGTTGTTGGCGACTGCGATTATAGATTTAGCTGATTATGGCGTTGTGAAAGAGTGCATAAGTGTAAGTGCTCCGATGAACAGTAAGAGGAGCATTAAGAACACAGATAAACCGATTTTGTATATGAAAATTCAGCCGTTTAAGAAGGGTCGTGCCAGCTCCTCGTCTAGGGAAAGCTTGTCAAGAGGGGTATCACTGGACAAGGCGGGTGGTGAATCTGTTTCGGCAATGATGGATGAAGAGTATGGTGATGAAGCGGAAGTTGCGTCTTTCACAGATGACGATGTTTCCTCCCACACATCTCAGACAGTATCTTCTTCTCTAGAAACAAATCGTGGGCTGTCTCCTCCAAAAGATGAGAATGGACAAGACAAAGTGCCTCATAATGCAAAGCATTCCTTAGCCTCAAACCTAGGCGCTGAAAAATCAAGAACAATACCTCAGAGTGCACCACAAGAATATCTGAAGGGAAGTTCATCATGCTCATCATCAGTTGACTTGTCTTCTGACCCTGGTAGCCCTGTAAATGGTCATGCTTCTGTAGCTTACTCTCACAGCTCTAGTTCGGCGACACTCATAAAAACTGGTGGTTCCCAGATCGTCTCTTCTTCTTCCTCATCATCATTGAATGAAAATGCAGAGGAGTCCAACACCAGCATGAGAAGCAATGGCCATGCACATGCCCAGGAGGTAAACGATAAGGTTGTCAATGGCAGAAGTAAAGTTACTGCTGATATTCAACAGAGTATCAAGGATGATGAGAAAGCTCAGGAAATTGGCAGAGATTCCATGGTGGCTGCTGCTGCTGGTGATATTTACGATAGTTCTATGGAGGACAAAGACGGACAGAAACAAGAAGAAAATGGTGATGAAAGACAAAATTGTGATGAGGAGAACCATTCTAGGGAAGGTGAATCATACATCGCAGGTCATGCTAATGGGAAACATGTTCCACTAGGAATGAATGGAGTTATTGTAAGCAATGAGAAATTAAAGCCTGTCAAGTCTGTTAGGTCAGTTGCTGACTTAAGTAAGAATACATTATCTAGGAATGATCAGCATGTAGAGGTAAAGGATGATGTTCAGGGAGATACGCAGAAGAGTGCAGATGTTGCAGGAAACCTCAGAGTTAAGGAAAGGAAAGAGGCGAAGGTGTATCCCAAGGATACAAGAAGTGTCATTTTAGAAAGCAAGGTTAATCAGATGGAGCACAGAATAAAGATGCTTGAGGGAGAGCTAAGAGAAGCTGCAGCTGTTGAGTCTGCTCTTTATTCAGTAGTTGCTGAGCATGGAAGTTCCATGAGTAAGGTCCATGCTCCAGCTCGGCGCCTTTCTAGGTTGTATCTTCATGCTTGTGGAGAAACTTCACGTTCTAGGAGAGCCAGTGCAGCTAGAAGTGTTGTTTCAGGACTAGTTTTGGTTGCAAAAGCATGTGGGAATGATGTTCCAAGGCTAACATTTTGGCTCTCAAACTCGATTGTCTTGAGAACAATTATAAGCCAGGCTACTGGGGACCCTGAACTTCCCAAGTCTGCCAGGTCTTCTATTGACAGAAATGGTGCTGCAAAAGTTAAACATAAGGCTTCATCTCCATTAAAATGGGAGGCTCCATCCTCTGGGAAAAAACAAGGGATGAAACTATTGAACGGAAGTTTTGGTGACTGGGAGAACCCAAATTCGTTTATGTCCACACTGGAGAAGATTGAATCATGGATCTTCTCCCGAATAGTTGAATCTATCTGGTGGCAGACTTTGACACCACATATGCAGTCGGTTGCTGCAAAGGCAATTGATGAAAATATTGGTTCAGTGTCACAAAAGAATTATAGAAGGACATCTAGTTCAGTTGATCAAGAGCAAAGTGACTTTTCATTAGACCTTTGGAAGAAGGCTTTCAGGGATGCTTGTGAAAGACTTTGTCCAGTAAGAGCTGGTGGGCATGAATGTGGCTGCTTGCCTTTGTTGTCTAGATTGGTCATGGAGCAATCGGTGGCTAGATTAGATGTGGCAATGTTCAATGCCATTCTCCGTGAATCTCCTGACGAGATCCCCAGTGACCCTGTGTCCGATCCCATCAGTGATTTGAAGGTTCTTCCAATTCCAGCTGGGAAATCTAGTTTTGGGGCAGGTGCACAGCTGAAGAGTGCGATTGGGAACTGGTCCAGATGGCTAACTGACCTATTCGGTATCGATGATGATGACTCATTTGAAGATGTAAATGGACATGGTGATAATGATGAGAGACTTGATACATCCTTCAAGTCCTTTCATCTGCTTAATGCATTGAGTGATCTTATGATGCTTCCAAAGGACATGCTCTTAAGCAAATCCATCAGAAAAGAGGTATGCCCTACATTTGCTGCACCACTGATCAAAAGGATTCTTGACAACTTTGTCCCTGACGAATTTTGCACTGACCCAATTCCAGACATTGTACTTGAAACCCTGGAGTCTGAGGACACTCTTGAGATTGGGGAGGAGGCTCTCACAAACGTCCCATGCACTGGACCTGTTACAGTCTATTTGCCACCCTCAACAGCTTTGGTTGCAAGTGTAATTGGAGATGCTGGAGGCCAATCACAGCTGAGAAGAAGCGGGTCTTCAGTGGTCAGGAAATCACACACCAGTGATGATGAGCTTGATGAACTAAATTCTCCCCTGGCCTCAATCTTCATAGGTTCTTCGGGGTCTTCACCAGTTGCATCAAAGCCTAACTGGGTTCCGAAGGGAAACATCAATCAAAATGCTGTCAGATATGAACTCCTTCGGGATGTTTGGATGAATAGCGAGTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
NT-C2

Protein Analysis

1052

Amino Acids

114.06

Weight (kDa)

5.68

Isoelectric Point (pI)

47.9

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
NT-C2 PF10358 16 - 167 3.7e-08 N-terminal C2 in EEIG1 and EHBP1 proteins
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 1862
AarI CACCTGC 1 cut(s) 2483
AasI GACNNNNNNGTC 1 cut(s) 2759
Acc36I ACCTGC 2 cut(s) 1283, 2483
AccB1I GGYRCC 1 cut(s) 1692
AccB7I CCANNNNNTGG 2 cut(s) 1982, 2870
AciI CCGC 5 cut(s) 89, 273, 572, 623, 2961
AclWI GGATC 3 cut(s) 2087, 2407, 2429
AcoI YGGCCR 2 cut(s) 86, 1036
AcsI RAATTY 4 cut(s) 495, 2041, 2771, 3016
AcuI CTGAAG 3 cut(s) 851, 2525, 2952
AcyI GRCGYC 1 cut(s) 1693
AfaI GTAC 1 cut(s) 2802
AfiI CCNNNNNNNGG 6 cut(s) 185, 534, 893, 1270, 1982, 2870
AflII CTTAAG 3 cut(s) 104, 1393, 2686
AflIII ACRYGT 1 cut(s) 1312
AhdI GACNNNNNGTC 1 cut(s) 2428
AhlI ACTAGT 1 cut(s) 1777
AjnI CCWGG 6 cut(s) 877, 1050, 1866, 1901, 2811, 3024
AleI CACNNNNGTG 1 cut(s) 2991
AloI GAACNNNNNNTCC 2 cut(s) 2191, 2223
Alw21I GWGCWC 4 cut(s) 439, 817, 1578, 2500
Alw26I GTCTC 4 cut(s) 138, 714, 973, 2602
Alw44I GTGCAC 2 cut(s) 813, 2496
AlwI GGATC 3 cut(s) 2087, 2407, 2429
AlwNI CAGNNNCTG 1 cut(s) 1388
Ama87I CYCGRG 1 cut(s) 71
AoxI GGCC 4 cut(s) 86, 1036, 2938, 3027
ApaLI GTGCAC 2 cut(s) 813, 2496
ApoI RAATTY 4 cut(s) 495, 2041, 2771, 3016
Asp700I GAANNNNTTC 2 cut(s) 2258, 3129
AspA2I CCTAGG 1 cut(s) 778
AspLEI GCGC 2 cut(s) 785, 1695
AspS9I GGNCC 5 cut(s) 35, 1675, 1879, 2526, 2873
AvaI CYCGRG 1 cut(s) 71
AvaII GGWCC 5 cut(s) 35, 1675, 1879, 2526, 2873
AvrII CCTAGG 1 cut(s) 778
BaeGI GKGCMC 2 cut(s) 817, 2500
BalI TGGCCA 1 cut(s) 1038
BanI GGYRCC 1 cut(s) 1692
BarI GAAGNNNNNNTAC 2 cut(s) 1075, 1107
BbsI GAAGAC 4 cut(s) 861, 1899, 2958, 3048
Bbv12I GWGCWC 4 cut(s) 439, 817, 1578, 2500
BbvCI CCTCAGC 1 cut(s) 251
BccI CCATC 6 cut(s) 592, 1564, 1984, 2447, 2526, 2705
BceAI ACGGC 2 cut(s) 76, 487
BciT130I CCWGG 6 cut(s) 879, 1052, 1868, 1903, 2813, 3026
BciVI GTATCC 2 cut(s) 1525, 1533
BclI TGATCA 3 cut(s) 1420, 2215, 2736
BcoDI GTCTC 4 cut(s) 138, 714, 973, 2602
BcuI ACTAGT 1 cut(s) 1777
BfmI CTRYAG 2 cut(s) 906, 1614
BfoI RGCGCY 2 cut(s) 786, 1696
BfrI CTTAAG 3 cut(s) 104, 1393, 2686
BfuAI ACCTGC 2 cut(s) 1283, 2483
BfuI GTATCC 2 cut(s) 1525, 1533
BlnI CCTAGG 1 cut(s) 778
BlpI GCTNAGC 1 cut(s) 1650
Bme1390I CCNGG 6 cut(s) 879, 1052, 1868, 1903, 2813, 3026
Bme18I GGWCC 5 cut(s) 35, 1675, 1879, 2526, 2873
BmeRI GACNNNNNGTC 1 cut(s) 2428
BmeT110I CYCGRG 1 cut(s) 71
BmgT120I GGNCC 5 cut(s) 35, 1675, 1879, 2526, 2873
BmiI GGNNCC 6 cut(s) 958, 1694, 1880, 1881, 1974, 3087
BmrFI CCNGG 6 cut(s) 879, 1052, 1868, 1903, 2813, 3026
BmrI ACTGGG 4 cut(s) 1884, 2038, 2412, 3091
BmsI GCATC 6 cut(s) 289, 1578, 2257, 2655, 2920, 3077
BmuI ACTGGG 4 cut(s) 1884, 2038, 2412, 3091
BpiI GAAGAC 4 cut(s) 861, 1899, 2958, 3048
BpmI CTGGAG 4 cut(s) 1668, 2081, 2834, 2955
Bpu10I CCTNAGC 3 cut(s) 251, 766, 1134
Bpu1102I GCTNAGC 1 cut(s) 1650
BpuEI CTTGAG 3 cut(s) 1613, 1870, 2852
Bsa29I ATCGAT 1 cut(s) 2556
BsaHI GRCGYC 1 cut(s) 1693
BsaI GGTCTC 1 cut(s) 138
BsaXI ACNNNNNCTCC 4 cut(s) 1326, 1356, 1735, 1765
Bsc4I CCNNNNNNNGG 6 cut(s) 185, 534, 893, 1270, 1982, 2870
Bse3DI GCAATG 4 cut(s) 600, 1039, 1354, 2382
BseBI CCWGG 6 cut(s) 879, 1052, 1868, 1903, 2813, 3026
BseCI ATCGAT 1 cut(s) 2556
BseLI CCNNNNNNNGG 6 cut(s) 185, 534, 893, 1270, 1982, 2870
BseMI GCAATG 4 cut(s) 600, 1039, 1354, 2382
BseMII CTCAG 8 cut(s) 242, 683, 821, 1148, 1504, 1641, 2811, 2942
BseRI GAGGAG 6 cut(s) 469, 517, 702, 1022, 1271, 2858
BseSI GKGCMC 2 cut(s) 817, 2500
BseYI CCCAGC 1 cut(s) 2471
BsgI GTGCAG 3 cut(s) 1491, 1773, 2712
BshFI GGCC 4 cut(s) 88, 1038, 2940, 3029
BshNI GGYRCC 1 cut(s) 1692
BshVI ATCGAT 1 cut(s) 2556
BsiHKAI GWGCWC 4 cut(s) 439, 817, 1578, 2500
BsiHKCI CYCGRG 1 cut(s) 71
BslFI GGGAC 4 cut(s) 161, 1892, 2747, 2846
BslI CCNNNNNNNGG 6 cut(s) 185, 534, 893, 1270, 1982, 2870
BsmAI GTCTC 4 cut(s) 138, 714, 973, 2602
BsmBI CGTCTC 1 cut(s) 973
BsmFI GGGAC 4 cut(s) 161, 1892, 2747, 2846
BsmI GAATGC 1 cut(s) 760
BsnI GGCC 4 cut(s) 88, 1038, 2940, 3029
Bso31I GGTCTC 1 cut(s) 138
BsoBI CYCGRG 1 cut(s) 71
Bsp1286I GDGCHC 4 cut(s) 439, 817, 1578, 2500
Bsp143I GATC 8 cut(s) 963, 1420, 2079, 2215, 2412, 2434, 2656, 2736
Bsp1720I GCTNAGC 1 cut(s) 1650
Bsp19I CCATGG 1 cut(s) 1155
BspACI CCGC 5 cut(s) 89, 273, 572, 623, 2961
BspANI GGCC 4 cut(s) 88, 1038, 2940, 3029
BspCNI CTCAG 8 cut(s) 243, 682, 820, 1147, 1503, 1642, 2812, 2943
BspDI ATCGAT 1 cut(s) 2556
BspLI GGNNCC 6 cut(s) 958, 1694, 1880, 1881, 1974, 3087
BspMAI CTGCAG 1 cut(s) 1618
BspMI ACCTGC 2 cut(s) 1283, 2483
BspPI GGATC 3 cut(s) 2087, 2407, 2429
BspT107I GGYRCC 1 cut(s) 1692
BspTI CTTAAG 3 cut(s) 104, 1393, 2686
BspTNI GGTCTC 1 cut(s) 138
BsrDI GCAATG 4 cut(s) 600, 1039, 1354, 2382
BssMI GATC 8 cut(s) 963, 1420, 2079, 2215, 2412, 2434, 2656, 2736
BssNI GRCGYC 1 cut(s) 1693
BssT1I CCWWGG 5 cut(s) 83, 778, 1155, 1527, 1814
Bst2UI CCWGG 6 cut(s) 879, 1052, 1868, 1903, 2813, 3026
Bst4CI ACNGT 7 cut(s) 43, 99, 149, 200, 449, 676, 2884
Bst6I CTCTTC 4 cut(s) 600, 976, 1460, 2501
BstACI GRCGYC 1 cut(s) 1693
BstAFI CTTAAG 3 cut(s) 104, 1393, 2686
BstAPI GCANNNNNTGC 2 cut(s) 1298, 1478
BstC8I GCNNGC 2 cut(s) 523, 2321
BstDSI CCRYGG 1 cut(s) 1155
BstENI CCTNNNNNAGG 1 cut(s) 532
BstH2I RGCGCY 2 cut(s) 786, 1696
BstHHI GCGC 2 cut(s) 785, 1695
BstKTI GATC 8 cut(s) 966, 1423, 2082, 2218, 2415, 2437, 2659, 2739
BstMAI GTCTC 4 cut(s) 138, 714, 973, 2602
BstMBI GATC 8 cut(s) 963, 1420, 2079, 2215, 2412, 2434, 2656, 2736
BstNI CCWGG 6 cut(s) 879, 1052, 1868, 1903, 2813, 3026
BstNSI RCATGY 5 cut(s) 1049, 1316, 1430, 1800, 2683
BstSCI CCNGG 6 cut(s) 877, 1050, 1866, 1901, 2811, 3024
BstSFI CTRYAG 2 cut(s) 906, 1614
BstSLI GKGCMC 2 cut(s) 817, 2500
BstV2I GAAGAC 4 cut(s) 861, 1899, 2958, 3048
BstX2I RGATCY 2 cut(s) 2079, 2412
BstXI CCANNNNNNTGG 2 cut(s) 1874, 1965
BstYI RGATCY 2 cut(s) 2079, 2412
Bsu15I ATCGAT 1 cut(s) 2556
BsuI GTATCC 2 cut(s) 1525, 1533
BsuRI GGCC 4 cut(s) 88, 1038, 2940, 3029
BsuTUI ATCGAT 1 cut(s) 2556
BtgI CCRYGG 1 cut(s) 1155
BtgZI GCGATG 1 cut(s) 1273
BveI ACCTGC 2 cut(s) 1283, 2483
Cac8I GCNNGC 2 cut(s) 523, 2321
CaiI CAGNNNCTG 1 cut(s) 1388
CfoI GCGC 2 cut(s) 785, 1695
Cfr13I GGNCC 5 cut(s) 35, 1675, 1879, 2526, 2873
ClaI ATCGAT 1 cut(s) 2556
CseI GACGC 1 cut(s) 621
Csp6I GTAC 1 cut(s) 2801
CspCI CAANNNNNGTGG 2 cut(s) 556, 591
CviQI GTAC 1 cut(s) 2801
DinI GGCGCC 1 cut(s) 1694
DpnI GATC 8 cut(s) 965, 1422, 2081, 2217, 2414, 2436, 2658, 2738
DpnII GATC 8 cut(s) 963, 1420, 2079, 2215, 2412, 2434, 2656, 2736
DrdI GACNNNNNNGTC 1 cut(s) 2759
DriI GACNNNNNGTC 1 cut(s) 2428
DseDI GACNNNNNNGTC 1 cut(s) 2759
EaeI YGGCCR 2 cut(s) 86, 1036
Eam1104I CTCTTC 4 cut(s) 600, 976, 1460, 2501
Eam1105I GACNNNNNGTC 1 cut(s) 2428
EarI CTCTTC 4 cut(s) 600, 976, 1460, 2501
Eco130I CCWWGG 5 cut(s) 83, 778, 1155, 1527, 1814
Eco31I GGTCTC 1 cut(s) 138
Eco47I GGWCC 5 cut(s) 35, 1675, 1879, 2526, 2873
Eco57I CTGAAG 3 cut(s) 851, 2525, 2952
Eco88I CYCGRG 1 cut(s) 71
EcoNI CCTNNNNNAGG 1 cut(s) 532
EcoO109I RGGNCCY 2 cut(s) 35, 1879
EcoRII CCWGG 6 cut(s) 877, 1050, 1866, 1901, 2811, 3024
EcoT14I CCWWGG 5 cut(s) 83, 778, 1155, 1527, 1814
EcoT22I ATGCAT 2 cut(s) 304, 2650
EgeI GGCGCC 1 cut(s) 1694
EheI GGCGCC 1 cut(s) 1694
ErhI CCWWGG 5 cut(s) 83, 778, 1155, 1527, 1814
Esp3I CGTCTC 1 cut(s) 973
FalI AAGNNNNNCTT 6 cut(s) 302, 334, 749, 781, 2950, 2982
FaqI GGGAC 4 cut(s) 161, 1892, 2747, 2846
FauI CCCGC 2 cut(s) 565, 2954
FauNDI CATATG 1 cut(s) 2130
FbaI TGATCA 3 cut(s) 1420, 2215, 2736
FokI GGATG 9 cut(s) 269, 614, 1133, 1454, 1963, 2011, 2279, 2605, 3149
GlaI GCGC 2 cut(s) 784, 1694
GsaI CCCAGC 1 cut(s) 2475
GsuI CTGGAG 4 cut(s) 1668, 2081, 2834, 2955
HaeII RGCGCY 2 cut(s) 786, 1696
HaeIII GGCC 4 cut(s) 88, 1038, 2940, 3029
HgaI GACGC 1 cut(s) 621
HhaI GCGC 2 cut(s) 785, 1695
Hin1I GRCGYC 1 cut(s) 1693
Hin6I GCGC 2 cut(s) 783, 1693
HinP1I GCGC 2 cut(s) 783, 1693
HincII GTYRAC 2 cut(s) 196, 862
HindII GTYRAC 2 cut(s) 196, 862
HindIII AAGCTT 1 cut(s) 541
Hpy166II GTNNAC 6 cut(s) 196, 815, 862, 1060, 2055, 2498
Hpy8I GTNNAC 6 cut(s) 196, 815, 862, 1060, 2055, 2498
Hpy99I CGWCG 1 cut(s) 184
HpyCH4III ACNGT 7 cut(s) 43, 99, 149, 200, 449, 676, 2884
HpyCH4IV ACGT 2 cut(s) 1735, 2859
HpySE526I ACGT 2 cut(s) 1735, 2859
Hsp92I GRCGYC 1 cut(s) 1693
HspAI GCGC 2 cut(s) 783, 1693
KasI GGCGCC 1 cut(s) 1692
KflI GGGWCCC 1 cut(s) 1879
Ksp22I TGATCA 3 cut(s) 1420, 2215, 2736
Kzo9I GATC 8 cut(s) 963, 1420, 2079, 2215, 2412, 2434, 2656, 2736
LmnI GCTCC 7 cut(s) 442, 456, 530, 1573, 1687, 1978, 2347
LweI GCATC 6 cut(s) 289, 1578, 2257, 2655, 2920, 3077
MaeII ACGT 2 cut(s) 1735, 2859
MalI GATC 8 cut(s) 965, 1422, 2081, 2217, 2414, 2436, 2658, 2738
MboI GATC 8 cut(s) 963, 1420, 2079, 2215, 2412, 2434, 2656, 2736
MfeI CAATTG 1 cut(s) 2154
MflI RGATCY 2 cut(s) 2079, 2412
MhlI GDGCHC 4 cut(s) 439, 817, 1578, 2500
MlsI TGGCCA 1 cut(s) 1038
MluNI TGGCCA 1 cut(s) 1038
Mly113I GGCGCC 1 cut(s) 1693
MlyI GAGTC 5 cut(s) 233, 1019, 1634, 2561, 2825
MmeI TCCRAC 1 cut(s) 1038
Mox20I TGGCCA 1 cut(s) 1038
Mph1103I ATGCAT 2 cut(s) 304, 2650
MroXI GAANNNNTTC 2 cut(s) 2258, 3129
MscI TGGCCA 1 cut(s) 1038
MslI CAYNNNNRTG 7 cut(s) 1022, 1044, 1302, 1719, 1963, 2310, 2991
Msp20I TGGCCA 1 cut(s) 1038
MspA1I CMGCKG 4 cut(s) 1619, 2471, 2503, 2950
MspCI CTTAAG 3 cut(s) 104, 1393, 2686
MspR9I CCNGG 6 cut(s) 879, 1052, 1868, 1903, 2813, 3026
MunI CAATTG 1 cut(s) 2154
Mva1269I GAATGC 1 cut(s) 760
MvaI CCWGG 6 cut(s) 879, 1052, 1868, 1903, 2813, 3026
NarI GGCGCC 1 cut(s) 1693
NcoI CCATGG 1 cut(s) 1155
NdeI CATATG 1 cut(s) 2130
NdeII GATC 8 cut(s) 963, 1420, 2079, 2215, 2412, 2434, 2656, 2736
NlaIV GGNNCC 6 cut(s) 958, 1694, 1880, 1881, 1974, 3087
NmeAIII GCCGAG 1 cut(s) 1669
NmuCI GTSAC 7 cut(s) 93, 99, 241, 2024, 2178, 2228, 2420
NsiI ATGCAT 2 cut(s) 304, 2650
NspI RCATGY 5 cut(s) 1049, 1316, 1430, 1800, 2683
OliI CACNNNNGTG 1 cut(s) 2991
PaeR7I CTCGAG 1 cut(s) 71
PaqCI CACCTGC 1 cut(s) 2483
PciI ACATGT 1 cut(s) 1312
PctI GAATGC 1 cut(s) 760
PdmI GAANNNNTTC 2 cut(s) 2258, 3129
PfeI GAWTC 8 cut(s) 25, 581, 1151, 1280, 2072, 2099, 2399, 2746
PflFI GACNNNGTC 1 cut(s) 2283
PflMI CCANNNNNTGG 2 cut(s) 1982, 2870
PleI GAGTC 5 cut(s) 232, 1018, 1633, 2561, 2824
PluTI GGCGCC 1 cut(s) 1696
PpsI GAGTC 5 cut(s) 232, 1018, 1633, 2561, 2824
PpuMI RGGWCCY 2 cut(s) 35, 1879
PscI ACATGT 1 cut(s) 1312
PsiI TTATAA 1 cut(s) 1862
Psp5II RGGWCCY 2 cut(s) 35, 1879
Psp6I CCWGG 6 cut(s) 877, 1050, 1866, 1901, 2811, 3024
PspFI CCCAGC 1 cut(s) 2471
PspGI CCWGG 6 cut(s) 877, 1050, 1866, 1901, 2811, 3024
PspN4I GGNNCC 6 cut(s) 958, 1694, 1880, 1881, 1974, 3087
PspPI GGNCC 5 cut(s) 35, 1675, 1879, 2526, 2873
PspPPI RGGWCCY 2 cut(s) 35, 1879
PsrI GAACNNNNNNTAC 2 cut(s) 142, 174
PstI CTGCAG 1 cut(s) 1618
PstNI CAGNNNCTG 1 cut(s) 1388
PsuI RGATCY 2 cut(s) 2079, 2412
PsyI GACNNNGTC 1 cut(s) 2283
PvuII CAGCTG 4 cut(s) 1619, 2471, 2503, 2950
RsaI GTAC 1 cut(s) 2802
RsaNI GTAC 1 cut(s) 2801
RseI CAYNNNNRTG 7 cut(s) 1022, 1044, 1302, 1719, 1963, 2310, 2991
Sau3AI GATC 8 cut(s) 963, 1420, 2079, 2215, 2412, 2434, 2656, 2736
Sau96I GGNCC 5 cut(s) 35, 1675, 1879, 2526, 2873
SchI GAGTC 5 cut(s) 233, 1019, 1634, 2561, 2825
ScrFI CCNGG 6 cut(s) 879, 1052, 1868, 1903, 2813, 3026
SduI GDGCHC 4 cut(s) 439, 817, 1578, 2500
SfaNI GCATC 6 cut(s) 289, 1578, 2257, 2655, 2920, 3077
SfcI CTRYAG 2 cut(s) 906, 1614
SfoI GGCGCC 1 cut(s) 1694
Sfr274I CTCGAG 1 cut(s) 71
SinI GGWCC 5 cut(s) 35, 1675, 1879, 2526, 2873
SlaI CTCGAG 1 cut(s) 71
SmiMI CAYNNNNRTG 7 cut(s) 1022, 1044, 1302, 1719, 1963, 2310, 2991
SmlI CTYRAG 7 cut(s) 71, 104, 1393, 1592, 1849, 2686, 2831
SmoI CTYRAG 7 cut(s) 71, 104, 1393, 1592, 1849, 2686, 2831
SpeI ACTAGT 1 cut(s) 1777
SsiI CCGC 5 cut(s) 89, 273, 572, 623, 2961
SspDI GGCGCC 1 cut(s) 1692
SspI AATATT 1 cut(s) 2167
StyD4I CCNGG 6 cut(s) 877, 1050, 1866, 1901, 2811, 3024
StyI CCWWGG 5 cut(s) 83, 778, 1155, 1527, 1814
TaaI ACNGT 7 cut(s) 43, 99, 149, 200, 449, 676, 2884
TaiI ACGT 2 cut(s) 1738, 2862
TaqI TCGA 5 cut(s) 72, 161, 182, 1841, 2556
TatI WGTACW 1 cut(s) 2800
TauI GCSGC 1 cut(s) 91
TfiI GAWTC 8 cut(s) 25, 581, 1151, 1280, 2072, 2099, 2399, 2746
TseFI GTSAC 7 cut(s) 93, 99, 241, 2024, 2178, 2228, 2420
Tsp45I GTSAC 7 cut(s) 93, 99, 241, 2024, 2178, 2228, 2420
TspGWI ACGGA 4 cut(s) 109, 1224, 2028, 2384
Tth111I GACNNNGTC 1 cut(s) 2283
Van91I CCANNNNNTGG 2 cut(s) 1982, 2870
Vha464I CTTAAG 3 cut(s) 104, 1393, 2686
VneI GTGCAC 2 cut(s) 813, 2496
VpaK11BI GGWCC 5 cut(s) 35, 1675, 1879, 2526, 2873
XagI CCTNNNNNAGG 1 cut(s) 532
XapI RAATTY 4 cut(s) 495, 2041, 2771, 3016
XbaI TCTAGA 2 cut(s) 688, 2333
XceI RCATGY 5 cut(s) 1049, 1316, 1430, 1800, 2683
XhoI CTCGAG 1 cut(s) 71
XmaJI CCTAGG 1 cut(s) 778
XmnI GAANNNNTTC 2 cut(s) 2258, 3129
Zsp2I ATGCAT 2 cut(s) 304, 2650
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.