AT3G02410

methylesterase

Basic Information

Type: gene
Biological Identity
arabidopsis_thaliana
3
Physical Location & Seq
Reverse (-)
489670 .. 494958
5289 bp
Loading structure...
UTR
Exon/CDS
Intron
AT3G02410.3

Sequence Viewer

Length: 1269 bp
ATGCAGTTGTCTCCGGAACGATGCCGTCCGATGTCTGAAAACAGAGAGGCTTGGTCAGCGAATTCCGAGGAAATGGAGCTGCTTCACGGCTCCAACAGATTATCTTCACCGGAACATGTTCGTAGAAGAGTCTCCGGGAATTCTTCTGAGGACGGTTCGCCTCGAATTTGCCGGCAGCAGTCGTTCGGTCGCGACATAGGCCATGCAGCTGCCGAGACGTATCTCATTACTCGACTTAGCTTCAACCTTCTTGGATATCTCGGGGTAGGTTACCGGTGGATCACAAGATTACTTGCTCTTGCTTGTTATGCAATGCTCCTTATGCCTGGTTTCCTTCAAGTTGCATATCTTTATTTTTTCTCATCTCAAGTCAGGAGGAGTATAGTTTATGGAGGTCATCCAAGGAATAGGCTGGATTTGTACATACCGCCAACGAGTGATGGCCTGAAGCCGGTTGTAGTTTTCGTTACTGGTGGAGCTTGGATTATCGGTTACAAAGCTTGGGGTTCTCTCTTGGGACTACAGCTAGCAGAAAGGGACATAATTGTGGCATGTCTAGATTACAGAAACTTTCCTCAGGGGACAATTAGTGATATGGTAAGTGATGCAGCTCAAGGAATCTCATTTGTCTGCAATAACATCTCTGCATTTGGAGGTGATCCTAACAGAATCTATCTGATGGGGCAATCGGCTGGTGCACATATCTCTTCTTGTGCTCTCTTTGAACAAGCTATTAAAGAATCAAGAGGGGAGAGCATCTCATGGAGTGTATCTCAGATTAAAGCTTACTTTGGTTTATCTGGAGGGTACAATCTCTTTAATCTGGTTGAACACTTCCACAACCGAGGCTTGTATCGTTCAATTTTCCTAAGCATAATGGAAGGAGAAGAGTCCTTTAAACAATTCTCCCCTGAAGTAAGATTGAAAGACCTGAATGTAAGAAAAGCTGCAGCCCTCTTACCTCATATTATACTCTTTCATGGATCCGCAGATTATTCAATTCCACCTGAAGCAAGCAAAACTTTTACAGATGCTCTTCAAGCTGCTGAAGTGAAAGCTGAGCTAGTTATGTACAAGGGTAAAACTCATACCGACCTATTTCTTCAGGATCCTCTGAGAGGCGGTAAAGATGAGCTATTTGATCATATAGTCTCTATGATACACGCCGATGACAGTGACGCATTGAGAAACGATGCTGTTGCGCCACCGAGGAAACGGCTTGTTCCAGAGTTCTTGCTGAAACTGGCTGGCAGGGTCAGCCCTTTTTGA

Protein Analysis

422

Amino Acids

47.01

Weight (kDa)

7.68

Isoelectric Point (pI)

50.24

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
BD-FAE PF20434 138 - 346 1.9e-24 BD-FAE
COesterase PF00135 138 - 255 5e-15 Carboxylesterase family
Abhydrolase_3 PF07859 153 - 363 2.2e-14 alpha/beta hydrolase fold
Peptidase_S9 PF00326 312 - 363 4.8e-06 Prolyl oligopeptidase family
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccII CGCG 1 cut(s) 192
AccIII TCCGGA 1 cut(s) 13
AciI CCGC 3 cut(s) 428, 987, 1122
AclWI GGATC 6 cut(s) 287, 653, 978, 991, 1103, 1116
AcsI RAATTY 3 cut(s) 61, 139, 165
AcuI CTGAAG 5 cut(s) 467, 933, 1029, 1068, 1088
AfaI GTAC 3 cut(s) 422, 809, 1073
AfiI CCNNNNNNNGG 2 cut(s) 451, 1118
AflIII ACRYGT 1 cut(s) 115
AgeI ACCGGT 1 cut(s) 273
AgsI TTSAA 8 cut(s) 244, 338, 725, 830, 861, 925, 999, 1040
AjnI CCWGG 1 cut(s) 325
Alw21I GWGCWC 2 cut(s) 700, 718
Alw26I GTCTC 4 cut(s) 15, 136, 209, 1156
Alw44I GTGCAC 1 cut(s) 696
AlwI GGATC 6 cut(s) 287, 653, 978, 991, 1103, 1116
Ama87I CYCGRG 1 cut(s) 260
Aor13HI TCCGGA 1 cut(s) 13
AoxI GGCC 2 cut(s) 199, 442
ApaLI GTGCAC 1 cut(s) 696
ApeKI GCWGC 8 cut(s) 79, 175, 206, 209, 608, 947, 950, 1043
ApoI RAATTY 3 cut(s) 61, 139, 165
AsiGI ACCGGT 1 cut(s) 273
Asp700I GAANNNNTTC 1 cut(s) 117
AspLEI GCGC 1 cut(s) 1204
AsuC2I CCSGG 1 cut(s) 136
AsuHPI GGTGA 2 cut(s) 99, 668
AsuNHI GCTAGC 1 cut(s) 526
AvaI CYCGRG 1 cut(s) 260
AxyI CCTNAGG 1 cut(s) 576
BaeGI GKGCMC 1 cut(s) 700
BamHI GGATCC 2 cut(s) 983, 1108
Bbv12I GWGCWC 2 cut(s) 700, 718
BbvI GCAGC 8 cut(s) 66, 187, 196, 218, 620, 934, 962, 1030
BccI CCATC 2 cut(s) 434, 673
BceAI ACGGC 3 cut(s) 9, 103, 1232
BcgI CGANNNNNNTGC 2 cut(s) 1181, 1215
BciT130I CCWGG 1 cut(s) 327
BclI TGATCA 1 cut(s) 1141
BcnI CCSGG 1 cut(s) 136
BcoDI GTCTC 4 cut(s) 15, 136, 209, 1156
BfaI CTAG 3 cut(s) 527, 557, 1064
BfmI CTRYAG 2 cut(s) 521, 948
BisI GCNGC 8 cut(s) 80, 176, 207, 210, 609, 948, 951, 1044
BlpI GCTNAGC 1 cut(s) 1059
BlsI GCNGC 8 cut(s) 81, 177, 208, 211, 610, 949, 952, 1045
Bme1390I CCNGG 2 cut(s) 136, 327
BmeT110I CYCGRG 1 cut(s) 260
BmiI GGNNCC 3 cut(s) 91, 985, 1110
BmrFI CCNGG 2 cut(s) 136, 327
BmsI GCATC 5 cut(s) 11, 595, 765, 1021, 1183
BmtI GCTAGC 1 cut(s) 530
BplI GAGNNNNNCTC 4 cut(s) 743, 775, 757, 789
BpmI CTGGAG 1 cut(s) 822
Bpu10I CCTNAGC 1 cut(s) 869
Bpu1102I GCTNAGC 1 cut(s) 1059
BpuEI CTTGAG 2 cut(s) 351, 597
BpuMI CCSGG 1 cut(s) 136
BsaJI CCNNGG 4 cut(s) 66, 401, 844, 1208
BsaWI WCCGGW 3 cut(s) 13, 109, 273
Bsc4I CCNNNNNNNGG 2 cut(s) 451, 1118
Bse118I RCCGGY 3 cut(s) 171, 273, 451
Bse1I ACTGG 2 cut(s) 475, 1248
Bse21I CCTNAGG 1 cut(s) 576
Bse3DI GCAATG 1 cut(s) 318
BseAI TCCGGA 1 cut(s) 13
BseBI CCWGG 1 cut(s) 327
BseDI CCNNGG 4 cut(s) 66, 401, 844, 1208
BseGI GGATG 1 cut(s) 397
BseLI CCNNNNNNNGG 2 cut(s) 451, 1118
BseMI GCAATG 1 cut(s) 318
BseMII CTCAG 5 cut(s) 138, 590, 788, 1050, 1106
BseNI ACTGG 2 cut(s) 475, 1248
BseRI GAGGAG 1 cut(s) 391
BseSI GKGCMC 1 cut(s) 700
BseXI GCAGC 8 cut(s) 66, 187, 196, 218, 620, 934, 962, 1030
Bsh1236I CGCG 1 cut(s) 192
Bsh1285I CGRYCG 1 cut(s) 190
BshFI GGCC 2 cut(s) 201, 444
BshTI ACCGGT 1 cut(s) 273
BsiEI CGRYCG 1 cut(s) 190
BsiHKAI GWGCWC 2 cut(s) 700, 718
BsiHKCI CYCGRG 1 cut(s) 260
BsiSI CCGG 6 cut(s) 14, 110, 135, 172, 274, 452
BslFI GGGAC 3 cut(s) 531, 551, 595
BslI CCNNNNNNNGG 2 cut(s) 451, 1118
BsmAI GTCTC 4 cut(s) 15, 136, 209, 1156
BsmBI CGTCTC 1 cut(s) 209
BsmFI GGGAC 3 cut(s) 531, 551, 595
BsnI GGCC 2 cut(s) 201, 444
BsoBI CYCGRG 1 cut(s) 260
Bsp1286I GDGCHC 2 cut(s) 700, 718
Bsp13I TCCGGA 1 cut(s) 13
Bsp1407I TGTACA 2 cut(s) 420, 1071
Bsp143I GATC 5 cut(s) 279, 658, 983, 1108, 1141
Bsp1720I GCTNAGC 1 cut(s) 1059
Bsp68I TCGCGA 1 cut(s) 192
BspACI CCGC 3 cut(s) 428, 987, 1122
BspANI GGCC 2 cut(s) 201, 444
BspCNI CTCAG 5 cut(s) 139, 589, 787, 1051, 1107
BspEI TCCGGA 1 cut(s) 13
BspFNI CGCG 1 cut(s) 192
BspLI GGNNCC 3 cut(s) 91, 985, 1110
BspMAI CTGCAG 1 cut(s) 952
BspOI GCTAGC 1 cut(s) 530
BspPI GGATC 6 cut(s) 287, 653, 978, 991, 1103, 1116
BspQI GCTCTTC 1 cut(s) 1041
BsrDI GCAATG 1 cut(s) 318
BsrFI RCCGGY 3 cut(s) 171, 273, 451
BsrGI TGTACA 2 cut(s) 420, 1071
BsrI ACTGG 2 cut(s) 475, 1248
BssAI RCCGGY 3 cut(s) 171, 273, 451
BssECI CCNNGG 4 cut(s) 66, 401, 844, 1208
BssMI GATC 5 cut(s) 279, 658, 983, 1108, 1141
BssT1I CCWWGG 1 cut(s) 401
Bst2UI CCWGG 1 cut(s) 327
Bst4CI ACNGT 2 cut(s) 155, 1175
Bst6I CTCTTC 4 cut(s) 121, 712, 882, 1041
BstAUI TGTACA 2 cut(s) 420, 1071
BstC8I GCNNGC 4 cut(s) 173, 528, 1015, 1249
BstDEI CTNAG 7 cut(s) 147, 236, 576, 774, 869, 1059, 1115
BstEII GGTNACC 1 cut(s) 269
BstENI CCTNNNNNAGG 1 cut(s) 1116
BstF5I GGATG 1 cut(s) 397
BstFNI CGCG 1 cut(s) 192
BstHHI GCGC 1 cut(s) 1204
BstKTI GATC 5 cut(s) 282, 661, 986, 1111, 1144
BstMAI GTCTC 4 cut(s) 15, 136, 209, 1156
BstMBI GATC 5 cut(s) 279, 658, 983, 1108, 1141
BstMCI CGRYCG 1 cut(s) 190
BstMWI GCNNNNNNNGC 6 cut(s) 56, 198, 308, 322, 1040, 1257
BstNI CCWGG 1 cut(s) 327
BstNSI RCATGY 2 cut(s) 119, 555
BstPI GGTNACC 1 cut(s) 269
BstSCI CCNGG 2 cut(s) 134, 325
BstSFI CTRYAG 2 cut(s) 521, 948
BstSLI GKGCMC 1 cut(s) 700
BstUI CGCG 1 cut(s) 192
BstV1I GCAGC 8 cut(s) 66, 187, 196, 218, 620, 934, 962, 1030
BstX2I RGATCY 2 cut(s) 983, 1108
BstYI RGATCY 2 cut(s) 983, 1108
Bsu36I CCTNAGG 1 cut(s) 576
BsuRI GGCC 2 cut(s) 201, 444
BtsCI GGATG 1 cut(s) 397
BtsIMutI CAGTG 1 cut(s) 1180
BtuMI TCGCGA 1 cut(s) 192
Cac8I GCNNGC 4 cut(s) 173, 528, 1015, 1249
CfoI GCGC 1 cut(s) 1204
Cfr10I RCCGGY 3 cut(s) 171, 273, 451
CseI GACGC 1 cut(s) 1187
Csp6I GTAC 3 cut(s) 421, 808, 1072
CspAI ACCGGT 1 cut(s) 273
CviAII CATG 5 cut(s) 116, 203, 552, 762, 980
CviQI GTAC 3 cut(s) 421, 808, 1072
DdeI CTNAG 7 cut(s) 147, 236, 576, 774, 869, 1059, 1115
DpnI GATC 5 cut(s) 281, 660, 985, 1110, 1143
DpnII GATC 5 cut(s) 279, 658, 983, 1108, 1141
DraI TTTAAA 1 cut(s) 898
Eam1104I CTCTTC 4 cut(s) 121, 712, 882, 1041
EarI CTCTTC 4 cut(s) 121, 712, 882, 1041
Eco130I CCWWGG 1 cut(s) 401
Eco32I GATATC 1 cut(s) 257
Eco57I CTGAAG 5 cut(s) 467, 933, 1029, 1068, 1088
Eco81I CCTNAGG 1 cut(s) 576
Eco88I CYCGRG 1 cut(s) 260
Eco91I GGTNACC 1 cut(s) 269
EcoNI CCTNNNNNAGG 1 cut(s) 1116
EcoO65I GGTNACC 1 cut(s) 269
EcoRI GAATTC 2 cut(s) 61, 139
EcoRII CCWGG 1 cut(s) 325
EcoRV GATATC 1 cut(s) 257
EcoT14I CCWWGG 1 cut(s) 401
ErhI CCWWGG 1 cut(s) 401
Esp3I CGTCTC 1 cut(s) 209
FaeI CATG 5 cut(s) 119, 206, 555, 765, 983
FalI AAGNNNNNCTT 2 cut(s) 1006, 1038
FaqI GGGAC 3 cut(s) 531, 551, 595
FatI CATG 5 cut(s) 115, 202, 551, 761, 979
FbaI TGATCA 1 cut(s) 1141
Fnu4HI GCNGC 8 cut(s) 80, 176, 207, 210, 609, 948, 951, 1044
FokI GGATG 1 cut(s) 384
Fsp4HI GCNGC 8 cut(s) 80, 176, 207, 210, 609, 948, 951, 1044
FspBI CTAG 3 cut(s) 527, 557, 1064
GlaI GCGC 1 cut(s) 1203
GluI GCNGC 8 cut(s) 80, 176, 207, 210, 609, 948, 951, 1044
GsuI CTGGAG 1 cut(s) 822
HaeIII GGCC 2 cut(s) 201, 444
HapII CCGG 6 cut(s) 14, 110, 135, 172, 274, 452
HgaI GACGC 1 cut(s) 1187
HhaI GCGC 1 cut(s) 1204
Hin1II CATG 5 cut(s) 119, 206, 555, 765, 983
Hin6I GCGC 1 cut(s) 1202
HinP1I GCGC 1 cut(s) 1202
HindIII AAGCTT 2 cut(s) 498, 783
HinfI GANTC 5 cut(s) 129, 618, 669, 740, 890
HpaII CCGG 6 cut(s) 14, 110, 135, 172, 274, 452
HphI GGTGA 2 cut(s) 99, 668
Hpy166II GTNNAC 1 cut(s) 698
Hpy188I TCNGA 7 cut(s) 30, 37, 67, 148, 678, 777, 1116
Hpy188III TCNNGA 8 cut(s) 14, 191, 373, 557, 744, 801, 1106, 1226
Hpy8I GTNNAC 1 cut(s) 698
HpyAV CCTTC 3 cut(s) 257, 344, 875
HpyCH4III ACNGT 2 cut(s) 155, 1175
HpyCH4IV ACGT 1 cut(s) 218
HpyCH4V TGCA 9 cut(s) 4, 206, 311, 344, 608, 633, 647, 698, 950
HpyF10VI GCNNNNNNNGC 6 cut(s) 56, 198, 308, 322, 1040, 1257
HpyF3I CTNAG 7 cut(s) 147, 236, 576, 774, 869, 1059, 1115
HpySE526I ACGT 1 cut(s) 218
Hsp92II CATG 5 cut(s) 119, 206, 555, 765, 983
HspAI GCGC 1 cut(s) 1202
Kpn2I TCCGGA 1 cut(s) 13
KroI GCCGGC 1 cut(s) 171
KroNI GCCGGC 1 cut(s) 173
Ksp22I TGATCA 1 cut(s) 1141
Kzo9I GATC 5 cut(s) 279, 658, 983, 1108, 1141
LguI GCTCTTC 1 cut(s) 1041
LmnI GCTCC 4 cut(s) 76, 95, 321, 476
Lsp1109I GCAGC 8 cut(s) 66, 187, 196, 218, 620, 934, 962, 1030
LweI GCATC 5 cut(s) 11, 595, 765, 1021, 1183
MaeI CTAG 3 cut(s) 527, 557, 1064
MaeII ACGT 1 cut(s) 218
MaeIII GTNAC 4 cut(s) 269, 466, 491, 1175
MalI GATC 5 cut(s) 281, 660, 985, 1110, 1143
MboI GATC 5 cut(s) 279, 658, 983, 1108, 1141
MboII GAAGA 7 cut(s) 96, 135, 138, 699, 899, 1028, 1094
MflI RGATCY 2 cut(s) 983, 1108
MhlI GDGCHC 2 cut(s) 700, 718
MluCI AATT 8 cut(s) 61, 139, 165, 543, 585, 861, 902, 999
MlyI GAGTC 2 cut(s) 138, 899
MmeI TCCRAC 1 cut(s) 117
MroI TCCGGA 1 cut(s) 13
MroNI GCCGGC 1 cut(s) 171
MroXI GAANNNNTTC 1 cut(s) 117
MseI TTAA 4 cut(s) 735, 780, 819, 897
MslI CAYNNNNRTG 2 cut(s) 545, 1167
MspA1I CMGCKG 1 cut(s) 209
MspI CCGG 6 cut(s) 14, 110, 135, 172, 274, 452
MspR9I CCNGG 2 cut(s) 136, 327
MvaI CCWGG 1 cut(s) 327
MvnI CGCG 1 cut(s) 192
MwoI GCNNNNNNNGC 6 cut(s) 56, 198, 308, 322, 1040, 1257
NaeI GCCGGC 1 cut(s) 173
NciI CCSGG 1 cut(s) 136
NdeII GATC 5 cut(s) 279, 658, 983, 1108, 1141
NgoMIV GCCGGC 1 cut(s) 171
NheI GCTAGC 1 cut(s) 526
NlaIII CATG 5 cut(s) 119, 206, 555, 765, 983
NlaIV GGNNCC 3 cut(s) 91, 985, 1110
NmeAIII GCCGAG 1 cut(s) 238
NmuCI GTSAC 1 cut(s) 1175
NruI TCGCGA 1 cut(s) 192
NspI RCATGY 2 cut(s) 119, 555
PciI ACATGT 1 cut(s) 115
PciSI GCTCTTC 1 cut(s) 1041
PdiI GCCGGC 1 cut(s) 173
PdmI GAANNNNTTC 1 cut(s) 117
PfeI GAWTC 3 cut(s) 618, 669, 740
PfoI TCCNGGA 1 cut(s) 134
PinAI ACCGGT 1 cut(s) 273
PkrI GCNGC 8 cut(s) 81, 177, 208, 211, 610, 949, 952, 1045
PleI GAGTC 2 cut(s) 137, 898
PpsI GAGTC 2 cut(s) 137, 898
PscI ACATGT 1 cut(s) 115
Psp6I CCWGG 1 cut(s) 325
PspEI GGTNACC 1 cut(s) 269
PspGI CCWGG 1 cut(s) 325
PspN4I GGNNCC 3 cut(s) 91, 985, 1110
PstI CTGCAG 1 cut(s) 952
PsuI RGATCY 2 cut(s) 983, 1108
PvuII CAGCTG 1 cut(s) 209
RruI TCGCGA 1 cut(s) 192
RsaI GTAC 3 cut(s) 422, 809, 1073
RsaNI GTAC 3 cut(s) 421, 808, 1072
RseI CAYNNNNRTG 2 cut(s) 545, 1167
SapI GCTCTTC 1 cut(s) 1041
SaqAI TTAA 4 cut(s) 735, 780, 819, 897
SatI GCNGC 8 cut(s) 80, 176, 207, 210, 609, 948, 951, 1044
Sau3AI GATC 5 cut(s) 279, 658, 983, 1108, 1141
SchI GAGTC 2 cut(s) 138, 899
ScrFI CCNGG 2 cut(s) 136, 327
SduI GDGCHC 2 cut(s) 700, 718
SfaNI GCATC 5 cut(s) 11, 595, 765, 1021, 1183
SfcI CTRYAG 2 cut(s) 521, 948
SmiMI CAYNNNNRTG 2 cut(s) 545, 1167
SmlI CTYRAG 2 cut(s) 366, 612
SmoI CTYRAG 2 cut(s) 366, 612
Sse9I AATT 8 cut(s) 61, 139, 165, 543, 585, 861, 902, 999
SsiI CCGC 3 cut(s) 428, 987, 1122
SspMI CTAG 3 cut(s) 527, 557, 1064
StyD4I CCNGG 2 cut(s) 134, 325
StyI CCWWGG 1 cut(s) 401
TaaI ACNGT 2 cut(s) 155, 1175
TaiI ACGT 1 cut(s) 221
TaqI TCGA 2 cut(s) 163, 232
TaqII GACCGA 1 cut(s) 176
TasI AATT 8 cut(s) 61, 139, 165, 543, 585, 861, 902, 999
TatI WGTACW 2 cut(s) 420, 1071
TfiI GAWTC 3 cut(s) 618, 669, 740
Tru1I TTAA 4 cut(s) 735, 780, 819, 897
Tru9I TTAA 4 cut(s) 735, 780, 819, 897
TscAI CASTG 1 cut(s) 1180
TseFI GTSAC 1 cut(s) 1175
TseI GCWGC 8 cut(s) 79, 175, 206, 209, 608, 947, 950, 1043
Tsp45I GTSAC 1 cut(s) 1175
TspDTI ATGAA 1 cut(s) 968
TspRI CASTG 1 cut(s) 1180
VneI GTGCAC 1 cut(s) 696
XagI CCTNNNNNAGG 1 cut(s) 1116
XapI RAATTY 3 cut(s) 61, 139, 165
XbaI TCTAGA 1 cut(s) 556
XceI RCATGY 2 cut(s) 119, 555
XmnI GAANNNNTTC 1 cut(s) 117
XspI CTAG 3 cut(s) 527, 557, 1064
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.