AT3G02490

Pentatricopeptide repeat-containing protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
arabidopsis_thaliana
3
OG0014368
Physical Location & Seq
Forward (+)
513478 .. 515925
2448 bp
Loading structure...
UTR
Exon/CDS
Intron
AT3G02490.1

Sequence Viewer

Length: 1998 bp
ATGAGGTATCAATGGCGATCGCTTCTTTTCCGGAGCTACCGTTCGTCTCCTCGTCCATTTCTTTCTCATCACTCGCGGTTCCAGGTAATCTCCAATTCGACTCGATCTTTCTCTTCTTTCCTCCACGAACGTTTTGGAGTGCAACAAAGACAGTGTCTTTTTGCCTTGCGATCGCCATTGGCGAGCTCTGTTAGCCGACGCTTTTCATCTGAGTCTGCGATAGAAGAGAAACTTCCTGCTGAGACTGTTGTGATTGATGTTTTTAGCAGATTGAATGGTAAGGATGAGATTACGAAAGAGCTGGATTCGAATGATGTTGTGATTAGCCATGAATTAGCATTGAGAGTTCTGAGGGAACTTGAATCAAGCCCTGATGTTGCGGGGAGGTTTTTCAAATGGGGTTTGGAGGCTTATCCTCAAAAACTTTCTTCCAAGAGTTATAACACGATGCTGCGTATTTTTGGTGTTAATGGATTAGTTGATGAGTTTTGGAGGTTGGTTGATGATATGAAGAAGAAAGGGCATGGTGTTTCAGCTAATGTTAGGGACAGAGTCGGTGACAAGTTTAAGAAAGATGGACTAGAAAATGATTTGGAGAGGCTGAAAGAGCTATTTGCTTCAGGTTCTATGGATAACTCTGTTGACAAGGTTTGCAATAGGGTGTGTAAGATTGTGATGAAGGAAGTGTGGGGTGCTGATGTAGAGAAACAGCTAAGGGATTTGAAGCTCGAGTTTAAAAGTGATGTGGTAAAGATGGTTTTGGAAAAACTTGACGTGGATCCGAGGAAAGCTTTGTTGTTCTTTAGGTGGATTGATGAGTCTGGAAGTTTTAAACATGATGAGAAGACGTATAATGCTATGGCCAGGGTTTTAGGGAAAGAGAAGTTTCTTGATAGGTTTCAGCACATGATAGAAGAAATTAGGAGTGCTGGTTACGAGATGGAAATGGAGACTTATGTTAGGGTTTCAGCAAGGTTCTGTCAGACTAAAATGATTAAAGAAGCTGTTGAGTTGTTTGAGTTTGCAATGGCAGGTAGCATTAGCAACACACCCACCCCACACTGCTGCAGTTTACTGCTCAAGAAAATTGTCACTGCAAAGAAATTGGACATGGACTTATTTACAAGAACTTTGAAAGCTTATACTGGGAATGGCAACGTTGTGCCGGATGTTATGCTGCAACATGTCCTCAAGTCTTTGAGAAGCGTTGATAGGTTTGGACAGAGCAACGAGGTGTTGAAAGCGATGAACGAAGGTGGATATGTTCCTAGCGGTGATTTGCAGAGTGTGATTGCATCAGGACTTAGTCGTAAGGGCAAGAAAGATGAAGCAAACGAACTTGTGAACTTTATGGAAGCTTCTGGAAACCATTTAGATGATAAAGCAATGGCATCTTTAGTTGAAGGGCACTGTGATGCTAAAGATCTCGAAGAAGCTTCAGAGTGTTTCAAGAAGATGATTGGGAAAGAGGGAGTCTCTTATGCAGGTTATGCATTTGAGAAGTTGGTACTTGCTTATTGCAACAGTTTTCAGGCAAGAGATGTATACAAGCTTTTCAGTGAGCTAGTGAAACAAAATCAGTTGAAACCTTGGCACAGTACATACAAAATTATGGTGAGGAATCTGTTGATGAAGAAGGTAGCAAGAGATGGTGGGTTTGAAGAAGCTTTGAGTCTTCTACCTATGATGAGAAATCACGGGTTCCCTCCTTTCGTGGACCCGTTCATGGATTACTTATCGAATAGTGGAACAAGCGCAGAGGCTTTCGCTTTTCTGAAGGCTGTGACTTCAAAGAAGTTTCCATCTAATTCAATGGTTCTGCGTGTATTCGAAGCTATGTTGAAGTCTGCAAGGCATAGTGAAGCTCAGGATTTACTGTCTATGTCCCCAAGTTATATCCGTCGCAATGCAGAAGTTCTAGAACTTTTCAATACCATGAAACCTGAAAAATGTTCTTTAGAGAAACCTTTGCCTGCTCCTGCTCAAATTGAAGCTTAA

Protein Analysis

665

Amino Acids

75.71

Weight (kDa)

8.85

Isoelectric Point (pI)

34.84

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0014368)

Species Orthologous Gene IDs
arabidopsis_thaliana AT3G02490 AT5G15980
fragaria_vesca FvH4_6g45820
malus_domestica MD09G1079500.v1.1 MD17G1069900.v1.1
prunus_persica Prupe.3G244800_v2.0.a1
pyrus_communis pycom09g00630 pycom17g07000
rosa_chinensis RchiOBHm_Chr2g0164021
rosa_laevigata RLG00000021433
rosa_multiflora Rmu_ssc0000432.1_g000010
rosa_rugosa Rorug02G0506300
rosa_samantha Rh2AG574400 Rh2BG585000 Rh2CG555900 Rh2DG594600
rosa_wichuraiana Rw2G047510

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 441
Acc36I ACCTGC 2 cut(s) 1022, 1475
AccI GTMKAC 1 cut(s) 1545
AccII CGCG 1 cut(s) 76
AccIII TCCGGA 1 cut(s) 30
AciI CCGC 3 cut(s) 76, 380, 1272
AclI AACGTT 2 cut(s) 130, 1158
AclWI GGATC 2 cut(s) 773, 786
AcoI YGGCCR 1 cut(s) 861
AcuI CTGAAG 3 cut(s) 603, 1422, 1796
AfaI GTAC 2 cut(s) 1509, 1600
AfiI CCNNNNNNNGG 1 cut(s) 1726
AflIII ACRYGT 1 cut(s) 1183
AjiI CACGTC 1 cut(s) 775
AjnI CCWGG 2 cut(s) 81, 863
AloI GAACNNNNNNTCC 2 cut(s) 25, 57
Alw21I GWGCWC 1 cut(s) 188
Alw26I GTCTC 4 cut(s) 51, 236, 944, 1480
AlwI GGATC 2 cut(s) 773, 786
Ama87I CYCGRG 1 cut(s) 728
Aor13HI TCCGGA 1 cut(s) 30
AoxI GGCC 1 cut(s) 861
ApeKI GCWGC 3 cut(s) 451, 1065, 1177
ArsI GACNNNNNNTTYG 2 cut(s) 139, 171
AsiSI GCGATCGC 2 cut(s) 20, 173
AspLEI GCGC 1 cut(s) 1757
AspS9I GGNCC 1 cut(s) 1717
AsuHPI GGTGA 3 cut(s) 569, 1286, 1627
AsuII TTCGAA 2 cut(s) 308, 1830
AvaI CYCGRG 1 cut(s) 728
AvaII GGWCC 1 cut(s) 1717
BaeGI GKGCMC 1 cut(s) 1410
BalI TGGCCA 1 cut(s) 863
BamHI GGATCC 1 cut(s) 778
BanII GRGCYC 1 cut(s) 188
BbsI GAAGAC 2 cut(s) 851, 1667
Bbv12I GWGCWC 1 cut(s) 188
BbvI GCAGC 3 cut(s) 438, 1052, 1164
BccI CCATC 5 cut(s) 569, 748, 934, 1643, 1810
BciT130I CCWGG 2 cut(s) 83, 865
BcoDI GTCTC 4 cut(s) 51, 236, 944, 1480
BfaI CTAG 4 cut(s) 581, 1269, 1565, 1919
BfmI CTRYAG 1 cut(s) 1066
BfuAI ACCTGC 2 cut(s) 1022, 1475
BglII AGATCT 1 cut(s) 1423
BisI GCNGC 3 cut(s) 452, 1066, 1178
BlsI GCNGC 3 cut(s) 453, 1067, 1179
Bme1390I CCNGG 2 cut(s) 83, 865
Bme18I GGWCC 1 cut(s) 1717
BmeT110I CYCGRG 1 cut(s) 728
BmgBI CACGTC 1 cut(s) 775
BmgT120I GGNCC 1 cut(s) 1717
BmiI GGNNCC 4 cut(s) 80, 780, 1703, 1719
BmrFI CCNGG 2 cut(s) 83, 865
BmrI ACTGGG 1 cut(s) 1155
BmsI GCATC 4 cut(s) 438, 1304, 1400, 1405
BmuI ACTGGG 1 cut(s) 1155
BpiI GAAGAC 2 cut(s) 851, 1667
BplI GAGNNNNNCTC 2 cut(s) 1460, 1492
Bpu10I CCTNAGC 2 cut(s) 713, 1866
Bpu14I TTCGAA 2 cut(s) 308, 1830
BpuEI CTTGAG 2 cut(s) 1064, 1175
BsaJI CCNNGG 3 cut(s) 782, 864, 1589
BsaWI WCCGGW 1 cut(s) 30
BsaXI ACNNNNNCTCC 4 cut(s) 25, 55, 916, 946
Bsc4I CCNNNNNNNGG 1 cut(s) 1726
Bse1I ACTGG 1 cut(s) 1150
Bse3DI GCAATG 3 cut(s) 1032, 1392, 1912
BseAI TCCGGA 1 cut(s) 30
BseBI CCWGG 2 cut(s) 83, 865
BseDI CCNNGG 3 cut(s) 782, 864, 1589
BseGI GGATG 2 cut(s) 289, 1174
BseLI CCNNNNNNNGG 1 cut(s) 1726
BseMI GCAATG 3 cut(s) 1032, 1392, 1912
BseMII CTCAG 4 cut(s) 201, 231, 341, 1880
BseNI ACTGG 1 cut(s) 1150
BseRI GAGGAG 1 cut(s) 39
BseSI GKGCMC 1 cut(s) 1410
BseXI GCAGC 3 cut(s) 438, 1052, 1164
Bsh1236I CGCG 1 cut(s) 76
Bsh1285I CGRYCG 2 cut(s) 20, 173
BshFI GGCC 1 cut(s) 863
BsiEI CGRYCG 2 cut(s) 20, 173
BsiHKAI GWGCWC 1 cut(s) 188
BsiHKCI CYCGRG 1 cut(s) 728
BsiSI CCGG 2 cut(s) 31, 1166
BslFI GGGAC 2 cut(s) 560, 1870
BslI CCNNNNNNNGG 1 cut(s) 1726
BsmAI GTCTC 4 cut(s) 51, 236, 944, 1480
BsmBI CGTCTC 1 cut(s) 51
BsmFI GGGAC 2 cut(s) 560, 1870
BsnI GGCC 1 cut(s) 863
BsoBI CYCGRG 1 cut(s) 728
Bsp119I TTCGAA 2 cut(s) 308, 1830
Bsp1286I GDGCHC 2 cut(s) 188, 1410
Bsp13I TCCGGA 1 cut(s) 30
Bsp143I GATC 5 cut(s) 17, 104, 170, 778, 1423
BspACI CCGC 3 cut(s) 76, 380, 1272
BspANI GGCC 1 cut(s) 863
BspCNI CTCAG 4 cut(s) 202, 232, 342, 1879
BspEI TCCGGA 1 cut(s) 30
BspFNI CGCG 1 cut(s) 76
BspLI GGNNCC 4 cut(s) 80, 780, 1703, 1719
BspMAI CTGCAG 1 cut(s) 1070
BspMI ACCTGC 2 cut(s) 1022, 1475
BspPI GGATC 2 cut(s) 773, 786
BspT104I TTCGAA 2 cut(s) 308, 1830
BsrDI GCAATG 3 cut(s) 1032, 1392, 1912
BsrI ACTGG 1 cut(s) 1150
BssECI CCNNGG 3 cut(s) 782, 864, 1589
BssMI GATC 5 cut(s) 17, 104, 170, 778, 1423
BssNAI GTATAC 1 cut(s) 1546
BssT1I CCWWGG 1 cut(s) 1589
Bst1107I GTATAC 1 cut(s) 1546
Bst2UI CCWGG 2 cut(s) 83, 865
Bst4CI ACNGT 7 cut(s) 41, 153, 247, 1412, 1526, 1598, 1878
Bst6I CTCTTC 2 cut(s) 118, 219
BstAPI GCANNNNNTGC 1 cut(s) 1490
BstBI TTCGAA 2 cut(s) 308, 1830
BstC8I GCNNGC 2 cut(s) 184, 1974
BstDEI CTNAG 6 cut(s) 210, 240, 350, 713, 1304, 1866
BstF5I GGATG 2 cut(s) 289, 1174
BstFNI CGCG 1 cut(s) 76
BstHHI GCGC 1 cut(s) 1757
BstKTI GATC 5 cut(s) 20, 107, 173, 781, 1426
BstMAI GTCTC 4 cut(s) 51, 236, 944, 1480
BstMBI GATC 5 cut(s) 17, 104, 170, 778, 1423
BstMCI CGRYCG 2 cut(s) 20, 173
BstMWI GCNNNNNNNGC 3 cut(s) 192, 607, 1490
BstNI CCWGG 2 cut(s) 83, 865
BstNSI RCATGY 1 cut(s) 1187
BstSCI CCNGG 2 cut(s) 81, 863
BstSFI CTRYAG 1 cut(s) 1066
BstSLI GKGCMC 1 cut(s) 1410
BstUI CGCG 1 cut(s) 76
BstV1I GCAGC 3 cut(s) 438, 1052, 1164
BstV2I GAAGAC 2 cut(s) 851, 1667
BstX2I RGATCY 2 cut(s) 778, 1423
BstYI RGATCY 2 cut(s) 778, 1423
BstZ17I GTATAC 1 cut(s) 1546
BsuRI GGCC 1 cut(s) 863
BtgZI GCGATG 1 cut(s) 1259
BtrI CACGTC 1 cut(s) 775
BtsCI GGATG 2 cut(s) 289, 1174
BtsI GCAGTG 2 cut(s) 1060, 1092
BtsIMutI CAGTG 5 cut(s) 158, 1060, 1092, 1408, 1564
BveI ACCTGC 2 cut(s) 1022, 1475
Cac8I GCNNGC 2 cut(s) 184, 1974
CfoI GCGC 1 cut(s) 1757
Cfr13I GGNCC 1 cut(s) 1717
CseI GACGC 1 cut(s) 207
Csp6I GTAC 2 cut(s) 1508, 1599
CviAII CATG 8 cut(s) 329, 524, 836, 907, 1111, 1184, 1726, 1936
CviQI GTAC 2 cut(s) 1508, 1599
DdeI CTNAG 6 cut(s) 210, 240, 350, 713, 1304, 1866
DpnI GATC 5 cut(s) 19, 106, 172, 780, 1425
DpnII GATC 5 cut(s) 17, 104, 170, 778, 1423
DraI TTTAAA 2 cut(s) 736, 832
EaeI YGGCCR 1 cut(s) 861
Eam1104I CTCTTC 2 cut(s) 118, 219
EarI CTCTTC 2 cut(s) 118, 219
Ecl136II GAGCTC 1 cut(s) 186
Eco130I CCWWGG 1 cut(s) 1589
Eco24I GRGCYC 1 cut(s) 188
Eco47I GGWCC 1 cut(s) 1717
Eco53kI GAGCTC 1 cut(s) 186
Eco57I CTGAAG 3 cut(s) 603, 1422, 1796
Eco88I CYCGRG 1 cut(s) 728
EcoICRI GAGCTC 1 cut(s) 186
EcoRII CCWGG 2 cut(s) 81, 863
EcoT14I CCWWGG 1 cut(s) 1589
EcoT22I ATGCAT 1 cut(s) 1495
EcoT38I GRGCYC 1 cut(s) 188
ErhI CCWWGG 1 cut(s) 1589
Esp3I CGTCTC 1 cut(s) 51
FaeI CATG 8 cut(s) 332, 527, 839, 910, 1114, 1187, 1729, 1939
FalI AAGNNNNNCTT 2 cut(s) 216, 248
FaqI GGGAC 2 cut(s) 560, 1870
FatI CATG 8 cut(s) 328, 523, 835, 906, 1110, 1183, 1725, 1935
FauI CCCGC 1 cut(s) 373
FblI GTMKAC 1 cut(s) 1545
Fnu4HI GCNGC 3 cut(s) 452, 1066, 1178
FokI GGATG 2 cut(s) 296, 1181
FriOI GRGCYC 1 cut(s) 188
Fsp4HI GCNGC 3 cut(s) 452, 1066, 1178
FspBI CTAG 4 cut(s) 581, 1269, 1565, 1919
GlaI GCGC 1 cut(s) 1756
GluI GCNGC 3 cut(s) 452, 1066, 1178
HaeIII GGCC 1 cut(s) 863
HapII CCGG 2 cut(s) 31, 1166
HgaI GACGC 1 cut(s) 207
HhaI GCGC 1 cut(s) 1757
Hin1II CATG 8 cut(s) 332, 527, 839, 910, 1114, 1187, 1729, 1939
Hin6I GCGC 1 cut(s) 1755
HinP1I GCGC 1 cut(s) 1755
HincII GTYRAC 1 cut(s) 643
HindII GTYRAC 1 cut(s) 643
HindIII AAGCTT 7 cut(s) 789, 1137, 1356, 1434, 1550, 1665, 1992
HinfI GANTC 9 cut(s) 100, 212, 305, 362, 552, 818, 1473, 1621, 1672
HpaII CCGG 2 cut(s) 31, 1166
HphI GGTGA 3 cut(s) 569, 1286, 1627
Hpy166II GTNNAC 5 cut(s) 643, 1073, 1345, 1546, 1717
Hpy188I TCNGA 6 cut(s) 211, 351, 783, 984, 1441, 1776
Hpy8I GTNNAC 5 cut(s) 643, 1073, 1345, 1546, 1717
Hpy99I CGWCG 2 cut(s) 201, 1905
HpyAV CCTTC 5 cut(s) 673, 1247, 1397, 1630, 1771
HpyCH4III ACNGT 7 cut(s) 41, 153, 247, 1412, 1526, 1598, 1878
HpyCH4IV ACGT 4 cut(s) 130, 774, 848, 1158
HpyF10VI GCNNNNNNNGC 3 cut(s) 192, 607, 1490
HpyF3I CTNAG 6 cut(s) 210, 240, 350, 713, 1304, 1866
HpySE526I ACGT 4 cut(s) 130, 774, 848, 1158
Hsp92II CATG 8 cut(s) 332, 527, 839, 910, 1114, 1187, 1729, 1939
HspAI GCGC 1 cut(s) 1755
Kpn2I TCCGGA 1 cut(s) 30
Kzo9I GATC 5 cut(s) 17, 104, 170, 778, 1423
LmnI GCTCC 2 cut(s) 33, 1981
Lsp1109I GCAGC 3 cut(s) 438, 1052, 1164
LweI GCATC 4 cut(s) 438, 1304, 1400, 1405
MaeI CTAG 4 cut(s) 581, 1269, 1565, 1919
MaeII ACGT 4 cut(s) 130, 774, 848, 1158
MaeIII GTNAC 4 cut(s) 557, 932, 1090, 1783
MalI GATC 5 cut(s) 19, 106, 172, 780, 1425
MboI GATC 5 cut(s) 17, 104, 170, 778, 1423
MflI RGATCY 2 cut(s) 778, 1423
MhlI GDGCHC 2 cut(s) 188, 1410
MlsI TGGCCA 1 cut(s) 863
MluCI AATT 8 cut(s) 94, 332, 918, 1086, 1103, 1608, 1807, 1986
MluNI TGGCCA 1 cut(s) 863
MlyI GAGTC 6 cut(s) 94, 221, 561, 827, 1482, 1681
Mox20I TGGCCA 1 cut(s) 863
Mph1103I ATGCAT 1 cut(s) 1495
MroI TCCGGA 1 cut(s) 30
MscI TGGCCA 1 cut(s) 863
MseI TTAA 6 cut(s) 468, 567, 735, 831, 996, 1996
MslI CAYNNNNRTG 2 cut(s) 1374, 1413
Msp20I TGGCCA 1 cut(s) 863
MspI CCGG 2 cut(s) 31, 1166
MspR9I CCNGG 2 cut(s) 83, 865
MvaI CCWGG 2 cut(s) 83, 865
MvnI CGCG 1 cut(s) 76
MwoI GCNNNNNNNGC 3 cut(s) 192, 607, 1490
NdeII GATC 5 cut(s) 17, 104, 170, 778, 1423
NlaIII CATG 8 cut(s) 332, 527, 839, 910, 1114, 1187, 1729, 1939
NlaIV GGNNCC 4 cut(s) 80, 780, 1703, 1719
NmuCI GTSAC 3 cut(s) 557, 1090, 1783
NsiI ATGCAT 1 cut(s) 1495
NspI RCATGY 1 cut(s) 1187
NspV TTCGAA 2 cut(s) 308, 1830
PaeR7I CTCGAG 1 cut(s) 728
PciI ACATGT 1 cut(s) 1183
PcsI WCGNNNNNNNCGW 1 cut(s) 179
PfeI GAWTC 3 cut(s) 305, 362, 1621
PflFI GACNNNGTC 3 cut(s) 153, 551, 1305
PkrI GCNGC 3 cut(s) 453, 1067, 1179
Ple19I CGATCG 2 cut(s) 20, 173
PleI GAGTC 6 cut(s) 94, 220, 560, 826, 1481, 1680
PpsI GAGTC 6 cut(s) 94, 220, 560, 826, 1481, 1680
PscI ACATGT 1 cut(s) 1183
PsiI TTATAA 1 cut(s) 441
Psp124BI GAGCTC 1 cut(s) 188
Psp1406I AACGTT 2 cut(s) 130, 1158
Psp6I CCWGG 2 cut(s) 81, 863
PspGI CCWGG 2 cut(s) 81, 863
PspN4I GGNNCC 4 cut(s) 80, 780, 1703, 1719
PspPI GGNCC 1 cut(s) 1717
PspXI VCTCGAGB 1 cut(s) 728
PstI CTGCAG 1 cut(s) 1070
PsuI RGATCY 2 cut(s) 778, 1423
PsyI GACNNNGTC 3 cut(s) 153, 551, 1305
PvuI CGATCG 2 cut(s) 20, 173
RgaI GCGATCGC 2 cut(s) 20, 173
RsaI GTAC 2 cut(s) 1509, 1600
RsaNI GTAC 2 cut(s) 1508, 1599
RseI CAYNNNNRTG 2 cut(s) 1374, 1413
SacI GAGCTC 1 cut(s) 188
SaqAI TTAA 6 cut(s) 468, 567, 735, 831, 996, 1996
SatI GCNGC 3 cut(s) 452, 1066, 1178
Sau3AI GATC 5 cut(s) 17, 104, 170, 778, 1423
Sau96I GGNCC 1 cut(s) 1717
SchI GAGTC 6 cut(s) 94, 221, 561, 827, 1482, 1681
ScrFI CCNGG 2 cut(s) 83, 865
SduI GDGCHC 2 cut(s) 188, 1410
SfaAI GCGATCGC 2 cut(s) 20, 173
SfaNI GCATC 4 cut(s) 438, 1304, 1400, 1405
SfcI CTRYAG 1 cut(s) 1066
Sfr274I CTCGAG 1 cut(s) 728
SfuI TTCGAA 2 cut(s) 308, 1830
SgfI GCGATCGC 2 cut(s) 20, 173
SinI GGWCC 1 cut(s) 1717
SlaI CTCGAG 1 cut(s) 728
SmiMI CAYNNNNRTG 2 cut(s) 1374, 1413
SmlI CTYRAG 3 cut(s) 728, 1079, 1190
SmoI CTYRAG 3 cut(s) 728, 1079, 1190
Sse9I AATT 8 cut(s) 94, 332, 918, 1086, 1103, 1608, 1807, 1986
SsiI CCGC 3 cut(s) 76, 380, 1272
SspMI CTAG 4 cut(s) 581, 1269, 1565, 1919
SstI GAGCTC 1 cut(s) 188
StyD4I CCNGG 2 cut(s) 81, 863
StyI CCWWGG 1 cut(s) 1589
TaaI ACNGT 7 cut(s) 41, 153, 247, 1412, 1526, 1598, 1878
TaiI ACGT 4 cut(s) 133, 777, 851, 1161
TaqI TCGA 7 cut(s) 98, 103, 308, 729, 1428, 1739, 1830
TasI AATT 8 cut(s) 94, 332, 918, 1086, 1103, 1608, 1807, 1986
TatI WGTACW 1 cut(s) 1598
TfiI GAWTC 3 cut(s) 305, 362, 1621
Tru1I TTAA 6 cut(s) 468, 567, 735, 831, 996, 1996
Tru9I TTAA 6 cut(s) 468, 567, 735, 831, 996, 1996
TscAI CASTG 5 cut(s) 158, 1067, 1099, 1415, 1564
TseFI GTSAC 3 cut(s) 557, 1090, 1783
TseI GCWGC 3 cut(s) 451, 1065, 1177
Tsp45I GTSAC 3 cut(s) 557, 1090, 1783
TspDTI ATGAA 9 cut(s) 195, 345, 524, 692, 1262, 1341, 1646, 1714, 1952
TspGWI ACGGA 1 cut(s) 1889
TspRI CASTG 5 cut(s) 158, 1067, 1099, 1415, 1564
Tth111I GACNNNGTC 3 cut(s) 153, 551, 1305
VpaK11BI GGWCC 1 cut(s) 1717
XbaI TCTAGA 1 cut(s) 1918
XceI RCATGY 1 cut(s) 1187
XcmI CCANNNNNNNNNTGG 1 cut(s) 131
XhoI CTCGAG 1 cut(s) 728
XmiI GTMKAC 1 cut(s) 1545
XspI CTAG 4 cut(s) 581, 1269, 1565, 1919
Zsp2I ATGCAT 1 cut(s) 1495
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.