Pentatricopeptide repeat-containing protein At3g02490
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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT3G02490 AT5G15980 |
| fragaria_vesca | FvH4_6g45820 |
| malus_domestica | MD09G1079500.v1.1 MD17G1069900.v1.1 |
| prunus_persica | Prupe.3G244800_v2.0.a1 |
| pyrus_communis | pycom09g00630 pycom17g07000 |
| rosa_chinensis | RchiOBHm_Chr2g0164021 |
| rosa_laevigata | RLG00000021433 |
| rosa_multiflora | Rmu_ssc0000432.1_g000010 |
| rosa_rugosa | Rorug02G0506300 |
| rosa_samantha | Rh2AG574400 Rh2BG585000 Rh2CG555900 Rh2DG594600 |
| rosa_wichuraiana | Rw2G047510 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AanI | TTATAA | 1 cut(s) | 894 |
| AccB7I | CCANNNNNTGG | 1 cut(s) | 376 |
| AccBSI | CCGCTC | 1 cut(s) | 650 |
| AccI | GTMKAC | 1 cut(s) | 668 |
| AclWI | GGATC | 2 cut(s) | 1733, 1950 |
| AcsI | RAATTY | 4 cut(s) | 68, 527, 1373, 1891 |
| AcuI | CTGAAG | 1 cut(s) | 1817 |
| AfaI | GTAC | 2 cut(s) | 817, 1105 |
| AfiI | CCNNNNNNNGG | 2 cut(s) | 376, 418 |
| AflII | CTTAAG | 1 cut(s) | 1226 |
| AjnI | CCWGG | 1 cut(s) | 1909 |
| AjuI | GAANNNNNNNTTGG | 2 cut(s) | 605, 637 |
| AleI | CACNNNNGTG | 1 cut(s) | 1988 |
| Alw21I | GWGCWC | 5 cut(s) | 46, 89, 270, 473, 1462 |
| Alw26I | GTCTC | 3 cut(s) | 7, 986, 1236 |
| AlwI | GGATC | 2 cut(s) | 1733, 1950 |
| Ama87I | CYCGRG | 1 cut(s) | 263 |
| ApeKI | GCWGC | 8 cut(s) | 31, 181, 240, 659, 1138, 1511, 1976, 1994 |
| ApoI | RAATTY | 4 cut(s) | 68, 527, 1373, 1891 |
| AspLEI | GCGC | 2 cut(s) | 1079, 1404 |
| AsuC2I | CCSGG | 1 cut(s) | 683 |
| AsuHPI | GGTGA | 4 cut(s) | 165, 470, 641, 1787 |
| AvaI | CYCGRG | 1 cut(s) | 263 |
| AxyI | CCTNAGG | 1 cut(s) | 315 |
| BanII | GRGCYC | 4 cut(s) | 46, 270, 413, 473 |
| BbsI | GAAGAC | 1 cut(s) | 1828 |
| Bbv12I | GWGCWC | 5 cut(s) | 46, 89, 270, 473, 1462 |
| BbvI | GCAGC | 8 cut(s) | 18, 168, 252, 671, 1150, 1498, 1963, 1981 |
| BccI | CCATC | 5 cut(s) | 611, 620, 847, 982, 1831 |
| BceAI | ACGGC | 1 cut(s) | 1889 |
| BcgI | CGANNNNNNTGC | 2 cut(s) | 565, 599 |
| BciT130I | CCWGG | 1 cut(s) | 1911 |
| BclI | TGATCA | 1 cut(s) | 880 |
| BcnI | CCSGG | 1 cut(s) | 683 |
| BcoDI | GTCTC | 3 cut(s) | 7, 986, 1236 |
| BfaI | CTAG | 6 cut(s) | 222, 309, 780, 906, 1161, 1305 |
| BfrI | CTTAAG | 1 cut(s) | 1226 |
| Bme1390I | CCNGG | 2 cut(s) | 683, 1911 |
| BmeT110I | CYCGRG | 1 cut(s) | 263 |
| BmrFI | CCNGG | 2 cut(s) | 683, 1911 |
| BmsI | GCATC | 7 cut(s) | 480, 1033, 1482, 1537, 1567, 1675, 1771 |
| BpiI | GAAGAC | 1 cut(s) | 1828 |
| BpmI | CTGGAG | 2 cut(s) | 1004, 1986 |
| BpuEI | CTTGAG | 2 cut(s) | 254, 1604 |
| BpuMI | CCSGG | 1 cut(s) | 683 |
| Bsa29I | ATCGAT | 1 cut(s) | 212 |
| BsaJI | CCNNGG | 3 cut(s) | 681, 1625, 1983 |
| Bsc4I | CCNNNNNNNGG | 2 cut(s) | 376, 418 |
| Bse118I | RCCGGY | 1 cut(s) | 256 |
| Bse1I | ACTGG | 1 cut(s) | 987 |
| Bse21I | CCTNAGG | 1 cut(s) | 315 |
| Bse3DI | GCAATG | 4 cut(s) | 26, 976, 1074, 1287 |
| BseBI | CCWGG | 1 cut(s) | 1911 |
| BseCI | ATCGAT | 1 cut(s) | 212 |
| BseDI | CCNNGG | 3 cut(s) | 681, 1625, 1983 |
| BseGI | GGATG | 8 cut(s) | 331, 622, 631, 745, 858, 1048, 1690, 1917 |
| BseLI | CCNNNNNNNGG | 2 cut(s) | 376, 418 |
| BseMI | GCAATG | 4 cut(s) | 26, 976, 1074, 1287 |
| BseMII | CTCAG | 3 cut(s) | 104, 243, 485 |
| BseNI | ACTGG | 1 cut(s) | 987 |
| BseRI | GAGGAG | 4 cut(s) | 26, 439, 872, 979 |
| BseXI | GCAGC | 8 cut(s) | 18, 168, 252, 671, 1150, 1498, 1963, 1981 |
| BsgI | GTGCAG | 1 cut(s) | 605 |
| BshVI | ATCGAT | 1 cut(s) | 212 |
| BsiHKAI | GWGCWC | 5 cut(s) | 46, 89, 270, 473, 1462 |
| BsiHKCI | CYCGRG | 1 cut(s) | 263 |
| BsiSI | CCGG | 3 cut(s) | 257, 683, 1336 |
| BslFI | GGGAC | 1 cut(s) | 220 |
| BslI | CCNNNNNNNGG | 2 cut(s) | 376, 418 |
| BsmAI | GTCTC | 3 cut(s) | 7, 986, 1236 |
| BsmBI | CGTCTC | 1 cut(s) | 986 |
| BsmFI | GGGAC | 1 cut(s) | 220 |
| BsmI | GAATGC | 1 cut(s) | 1331 |
| BsoBI | CYCGRG | 1 cut(s) | 263 |
| Bsp1286I | GDGCHC | 6 cut(s) | 46, 89, 270, 413, 473, 1462 |
| Bsp143I | GATC | 4 cut(s) | 280, 880, 1738, 1942 |
| Bsp19I | CCATGG | 1 cut(s) | 1625 |
| BspCNI | CTCAG | 3 cut(s) | 103, 244, 486 |
| BspDI | ATCGAT | 1 cut(s) | 212 |
| BspPI | GGATC | 2 cut(s) | 1733, 1950 |
| BspQI | GCTCTTC | 1 cut(s) | 389 |
| BspTI | CTTAAG | 1 cut(s) | 1226 |
| BsrBI | CCGCTC | 1 cut(s) | 650 |
| BsrDI | GCAATG | 4 cut(s) | 26, 976, 1074, 1287 |
| BsrFI | RCCGGY | 1 cut(s) | 256 |
| BsrI | ACTGG | 1 cut(s) | 987 |
| BssAI | RCCGGY | 1 cut(s) | 256 |
| BssECI | CCNNGG | 3 cut(s) | 681, 1625, 1983 |
| BssMI | GATC | 4 cut(s) | 280, 880, 1738, 1942 |
| BssT1I | CCWWGG | 1 cut(s) | 1625 |
| Bst2UI | CCWGG | 1 cut(s) | 1911 |
| Bst4CI | ACNGT | 7 cut(s) | 81, 1260, 1270, 1448, 1568, 1834, 1880 |
| Bst6I | CTCTTC | 1 cut(s) | 389 |
| BstAFI | CTTAAG | 1 cut(s) | 1226 |
| BstC8I | GCNNGC | 6 cut(s) | 6, 46, 258, 825, 1075, 1351 |
| BstDEI | CTNAG | 8 cut(s) | 90, 122, 252, 315, 494, 812, 1340, 1998 |
| BstDSI | CCRYGG | 2 cut(s) | 1625, 1983 |
| BstF5I | GGATG | 8 cut(s) | 331, 622, 631, 745, 858, 1048, 1690, 1917 |
| BstHHI | GCGC | 2 cut(s) | 1079, 1404 |
| BstKTI | GATC | 4 cut(s) | 283, 883, 1741, 1945 |
| BstMAI | GTCTC | 3 cut(s) | 7, 986, 1236 |
| BstMBI | GATC | 4 cut(s) | 280, 880, 1738, 1942 |
| BstNI | CCWGG | 1 cut(s) | 1911 |
| BstSCI | CCNGG | 2 cut(s) | 681, 1909 |
| BstV1I | GCAGC | 8 cut(s) | 18, 168, 252, 671, 1150, 1498, 1963, 1981 |
| BstV2I | GAAGAC | 1 cut(s) | 1828 |
| BstX2I | RGATCY | 1 cut(s) | 1942 |
| BstXI | CCANNNNNNTGG | 1 cut(s) | 1990 |
| BstYI | RGATCY | 1 cut(s) | 1942 |
| Bsu15I | ATCGAT | 1 cut(s) | 212 |
| Bsu36I | CCTNAGG | 1 cut(s) | 315 |
| BsuTUI | ATCGAT | 1 cut(s) | 212 |
| BtgI | CCRYGG | 2 cut(s) | 1625, 1983 |
| BtgZI | GCGATG | 2 cut(s) | 23, 1817 |
| BtsCI | GGATG | 8 cut(s) | 331, 622, 631, 745, 858, 1048, 1690, 1917 |
| BtsIMutI | CAGTG | 5 cut(s) | 833, 1265, 1444, 1573, 1885 |
| Cac8I | GCNNGC | 6 cut(s) | 6, 46, 258, 825, 1075, 1351 |
| CfoI | GCGC | 2 cut(s) | 1079, 1404 |
| Cfr10I | RCCGGY | 1 cut(s) | 256 |
| ClaI | ATCGAT | 1 cut(s) | 212 |
| Csp6I | GTAC | 2 cut(s) | 816, 1104 |
| CviAII | CATG | 8 cut(s) | 284, 371, 450, 787, 878, 1626, 1718, 1928 |
| CviQI | GTAC | 2 cut(s) | 816, 1104 |
| DdeI | CTNAG | 8 cut(s) | 90, 122, 252, 315, 494, 812, 1340, 1998 |
| DpnI | GATC | 4 cut(s) | 282, 882, 1740, 1944 |
| DpnII | GATC | 4 cut(s) | 280, 880, 1738, 1942 |
| Eam1104I | CTCTTC | 1 cut(s) | 389 |
| EarI | CTCTTC | 1 cut(s) | 389 |
| EciI | GGCGGA | 1 cut(s) | 48 |
| Ecl136II | GAGCTC | 3 cut(s) | 44, 268, 471 |
| Eco130I | CCWWGG | 1 cut(s) | 1625 |
| Eco24I | GRGCYC | 4 cut(s) | 46, 270, 413, 473 |
| Eco53kI | GAGCTC | 3 cut(s) | 44, 268, 471 |
| Eco57I | CTGAAG | 1 cut(s) | 1817 |
| Eco81I | CCTNAGG | 1 cut(s) | 315 |
| Eco88I | CYCGRG | 1 cut(s) | 263 |
| EcoICRI | GAGCTC | 3 cut(s) | 44, 268, 471 |
| EcoRI | GAATTC | 2 cut(s) | 68, 1373 |
| EcoRII | CCWGG | 1 cut(s) | 1909 |
| EcoT14I | CCWWGG | 1 cut(s) | 1625 |
| EcoT22I | ATGCAT | 2 cut(s) | 1552, 1582 |
| EcoT38I | GRGCYC | 4 cut(s) | 46, 270, 413, 473 |
| ErhI | CCWWGG | 1 cut(s) | 1625 |
| Esp3I | CGTCTC | 1 cut(s) | 986 |
| FaeI | CATG | 8 cut(s) | 287, 374, 453, 790, 881, 1629, 1721, 1931 |
| FalI | AAGNNNNNCTT | 2 cut(s) | 1281, 1313 |
| FaqI | GGGAC | 1 cut(s) | 220 |
| FatI | CATG | 8 cut(s) | 283, 370, 449, 786, 877, 1625, 1717, 1927 |
| FauI | CCCGC | 3 cut(s) | 245, 655, 1120 |
| FbaI | TGATCA | 1 cut(s) | 880 |
| FblI | GTMKAC | 1 cut(s) | 668 |
| FokI | GGATG | 8 cut(s) | 338, 629, 638, 752, 865, 1055, 1697, 1904 |
| FriOI | GRGCYC | 4 cut(s) | 46, 270, 413, 473 |
| FspBI | CTAG | 6 cut(s) | 222, 309, 780, 906, 1161, 1305 |
| GlaI | GCGC | 2 cut(s) | 1078, 1403 |
| GsuI | CTGGAG | 2 cut(s) | 1004, 1986 |
| HapII | CCGG | 3 cut(s) | 257, 683, 1336 |
| HhaI | GCGC | 2 cut(s) | 1079, 1404 |
| Hin1II | CATG | 8 cut(s) | 287, 374, 453, 790, 881, 1629, 1721, 1931 |
| Hin6I | GCGC | 2 cut(s) | 1077, 1402 |
| HinP1I | GCGC | 2 cut(s) | 1077, 1402 |
| HindIII | AAGCTT | 4 cut(s) | 167, 594, 1392, 1854 |
| HinfI | GANTC | 8 cut(s) | 275, 347, 404, 1150, 1205, 1598, 1677, 1722 |
| HpaII | CCGG | 3 cut(s) | 257, 683, 1336 |
| HphI | GGTGA | 4 cut(s) | 165, 470, 641, 1787 |
| Hpy166II | GTNNAC | 5 cut(s) | 97, 669, 1051, 1295, 1316 |
| Hpy188I | TCNGA | 7 cut(s) | 41, 253, 280, 1236, 1411, 1477, 1692 |
| Hpy188III | TCNNGA | 7 cut(s) | 158, 222, 1161, 1463, 1767, 1795, 1965 |
| Hpy8I | GTNNAC | 5 cut(s) | 97, 669, 1051, 1295, 1316 |
| Hpy99I | CGWCG | 1 cut(s) | 85 |
| HpyAV | CCTTC | 8 cut(s) | 379, 449, 607, 1033, 1098, 1283, 1604, 1792 |
| HpyCH4III | ACNGT | 7 cut(s) | 81, 1260, 1270, 1448, 1568, 1834, 1880 |
| HpyCH4IV | ACGT | 2 cut(s) | 995, 1972 |
| HpyF3I | CTNAG | 8 cut(s) | 90, 122, 252, 315, 494, 812, 1340, 1998 |
| HpySE526I | ACGT | 2 cut(s) | 995, 1972 |
| Hsp92II | CATG | 8 cut(s) | 287, 374, 453, 790, 881, 1629, 1721, 1931 |
| HspAI | GCGC | 2 cut(s) | 1077, 1402 |
| KroI | GCCGGC | 1 cut(s) | 256 |
| KroNI | GCCGGC | 1 cut(s) | 258 |
| Ksp22I | TGATCA | 1 cut(s) | 880 |
| Kzo9I | GATC | 4 cut(s) | 280, 880, 1738, 1942 |
| LguI | GCTCTTC | 1 cut(s) | 389 |
| LmnI | GCTCC | 4 cut(s) | 39, 476, 966, 1984 |
| Lsp1109I | GCAGC | 8 cut(s) | 18, 168, 252, 671, 1150, 1498, 1963, 1981 |
| LweI | GCATC | 7 cut(s) | 480, 1033, 1482, 1537, 1567, 1675, 1771 |
| MaeI | CTAG | 6 cut(s) | 222, 309, 780, 906, 1161, 1305 |
| MaeII | ACGT | 2 cut(s) | 995, 1972 |
| MaeIII | GTNAC | 3 cut(s) | 782, 1442, 1587 |
| MalI | GATC | 4 cut(s) | 282, 882, 1740, 1944 |
| MbiI | CCGCTC | 1 cut(s) | 650 |
| MboI | GATC | 4 cut(s) | 280, 880, 1738, 1942 |
| MboII | GAAGA | 6 cut(s) | 406, 565, 568, 935, 1790, 1828 |
| MflI | RGATCY | 1 cut(s) | 1942 |
| MhlI | GDGCHC | 6 cut(s) | 46, 89, 270, 413, 473, 1462 |
| MlyI | GAGTC | 3 cut(s) | 269, 356, 1159 |
| MmeI | TCCRAC | 3 cut(s) | 603, 783, 1920 |
| Mph1103I | ATGCAT | 2 cut(s) | 1552, 1582 |
| MroNI | GCCGGC | 1 cut(s) | 256 |
| MseI | TTAA | 5 cut(s) | 510, 792, 1002, 1227, 1433 |
| MslI | CAYNNNNRTG | 2 cut(s) | 1932, 1988 |
| MspA1I | CMGCKG | 2 cut(s) | 662, 1141 |
| MspCI | CTTAAG | 1 cut(s) | 1226 |
| MspI | CCGG | 3 cut(s) | 257, 683, 1336 |
| MspR9I | CCNGG | 2 cut(s) | 683, 1911 |
| Mva1269I | GAATGC | 1 cut(s) | 1331 |
| MvaI | CCWGG | 1 cut(s) | 1911 |
| NaeI | GCCGGC | 1 cut(s) | 258 |
| NciI | CCSGG | 1 cut(s) | 683 |
| NcoI | CCATGG | 1 cut(s) | 1625 |
| NdeII | GATC | 4 cut(s) | 280, 880, 1738, 1942 |
| NgoMIV | GCCGGC | 1 cut(s) | 256 |
| NlaIII | CATG | 8 cut(s) | 287, 374, 453, 790, 881, 1629, 1721, 1931 |
| NmuCI | GTSAC | 2 cut(s) | 782, 1442 |
| NsiI | ATGCAT | 2 cut(s) | 1552, 1582 |
| OliI | CACNNNNGTG | 1 cut(s) | 1988 |
| PaeR7I | CTCGAG | 1 cut(s) | 263 |
| PciSI | GCTCTTC | 1 cut(s) | 389 |
| PcsI | WCGNNNNNNNCGW | 1 cut(s) | 485 |
| PctI | GAATGC | 1 cut(s) | 1331 |
| PdiI | GCCGGC | 1 cut(s) | 258 |
| PfeI | GAWTC | 5 cut(s) | 404, 1205, 1598, 1677, 1722 |
| PflMI | CCANNNNNTGG | 1 cut(s) | 376 |
| PleI | GAGTC | 3 cut(s) | 269, 355, 1158 |
| PpsI | GAGTC | 3 cut(s) | 269, 355, 1158 |
| PsiI | TTATAA | 1 cut(s) | 894 |
| Psp124BI | GAGCTC | 3 cut(s) | 46, 270, 473 |
| Psp6I | CCWGG | 1 cut(s) | 1909 |
| PspGI | CCWGG | 1 cut(s) | 1909 |
| PspXI | VCTCGAGB | 1 cut(s) | 263 |
| PsuI | RGATCY | 1 cut(s) | 1942 |
| PvuII | CAGCTG | 1 cut(s) | 1141 |
| RsaI | GTAC | 2 cut(s) | 817, 1105 |
| RsaNI | GTAC | 2 cut(s) | 816, 1104 |
| RseI | CAYNNNNRTG | 2 cut(s) | 1932, 1988 |
| SacI | GAGCTC | 3 cut(s) | 46, 270, 473 |
| SapI | GCTCTTC | 1 cut(s) | 389 |
| SaqAI | TTAA | 5 cut(s) | 510, 792, 1002, 1227, 1433 |
| Sau3AI | GATC | 4 cut(s) | 280, 880, 1738, 1942 |
| SchI | GAGTC | 3 cut(s) | 269, 356, 1159 |
| ScrFI | CCNGG | 2 cut(s) | 683, 1911 |
| SduI | GDGCHC | 6 cut(s) | 46, 89, 270, 413, 473, 1462 |
| SfaNI | GCATC | 7 cut(s) | 480, 1033, 1482, 1537, 1567, 1675, 1771 |
| Sfr274I | CTCGAG | 1 cut(s) | 263 |
| SlaI | CTCGAG | 1 cut(s) | 263 |
| SmiMI | CAYNNNNRTG | 2 cut(s) | 1932, 1988 |
| SmlI | CTYRAG | 4 cut(s) | 263, 269, 1226, 1619 |
| SmoI | CTYRAG | 4 cut(s) | 263, 269, 1226, 1619 |
| SspI | AATATT | 1 cut(s) | 1696 |
| SspMI | CTAG | 6 cut(s) | 222, 309, 780, 906, 1161, 1305 |
| SstI | GAGCTC | 3 cut(s) | 46, 270, 473 |
| StyD4I | CCNGG | 2 cut(s) | 681, 1909 |
| StyI | CCWWGG | 1 cut(s) | 1625 |
| TaaI | ACNGT | 7 cut(s) | 81, 1260, 1270, 1448, 1568, 1834, 1880 |
| TaiI | ACGT | 2 cut(s) | 998, 1975 |
| TaqII | GACCGA | 1 cut(s) | 1591 |
| TatI | WGTACW | 1 cut(s) | 815 |
| TauI | GCSGC | 3 cut(s) | 51, 54, 64 |
| TfiI | GAWTC | 5 cut(s) | 404, 1205, 1598, 1677, 1722 |
| Tru1I | TTAA | 5 cut(s) | 510, 792, 1002, 1227, 1433 |
| Tru9I | TTAA | 5 cut(s) | 510, 792, 1002, 1227, 1433 |
| TscAI | CASTG | 5 cut(s) | 840, 1265, 1451, 1573, 1885 |
| TseFI | GTSAC | 2 cut(s) | 782, 1442 |
| TseI | GCWGC | 8 cut(s) | 31, 181, 240, 659, 1138, 1511, 1976, 1994 |
| Tsp45I | GTSAC | 2 cut(s) | 782, 1442 |
| TspDTI | ATGAA | 9 cut(s) | 61, 540, 566, 972, 993, 1052, 1366, 1623, 1724 |
| TspRI | CASTG | 5 cut(s) | 840, 1265, 1451, 1573, 1885 |
| Van91I | CCANNNNNTGG | 1 cut(s) | 376 |
| Vha464I | CTTAAG | 1 cut(s) | 1226 |
| XapI | RAATTY | 4 cut(s) | 68, 527, 1373, 1891 |
| XbaI | TCTAGA | 2 cut(s) | 221, 1160 |
| XhoI | CTCGAG | 1 cut(s) | 263 |
| XmiI | GTMKAC | 1 cut(s) | 668 |
| XspI | CTAG | 6 cut(s) | 222, 309, 780, 906, 1161, 1305 |
| Zsp2I | ATGCAT | 2 cut(s) | 1552, 1582 |