Basic Information

Type: gene

Biological Identity

Species

arabidopsis_thaliana

Chromosome

Orthogroup ID

OG0008729

Physical Location & Seq

Genomic Coordinates Reverse (-)

2469783 .. 2473095

Gene Structure 3313 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

AT3G07740.3

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1647 bp

ATGGGTCGTTCGAAACTAGCTTCTCGTCCTGCTGAGGAAGACCTGAATCCAGGAAAATCAAAAAGGAAAAAGATATCATTGGGTCCTGAGAATGCTGCGGCATCAATTTCCACCGGAATTGAAGCTGGGAATGAGAGGAAACCTGGCCTTTACTGTTGTAACTATTGCGATAAAGATCTGTCTGGTTTGGTTCGTTTCAAATGTGCTGTTTGTATGGACTTTGATCTTTGTGTGGAATGCTTTTCTGTCGGCGTTGAACTTAATCGTCACAAGAACAGTCACCCATATCGTGTTATGGACAATTTGTCTTTTTCGCTTGTTACTTCTGATTGGAATGCCGATGAAGAGATACTCCTTCTTGAGGCCATTGCGACATACGGGTTTGGCAATTGGAAAGAAGTTGCAGACCATGTTGGTAGTAAGACAACGACAGAATGTATTAAACACTTCAATTCTGCTTACATGCAGTCACCATGCTTTCCACTTCCGGACTTGTCCCATACTATTGGAAAGAGCAAAGATGAGCTGCTTGCTATGAGTAAAGATAGTGCAGTCAAAACAGAAATACCTGCATTTGTGAGGCTATCTCCAAAAGAAGAGTTACCTGTGTCAGCTGAAATCAAACACGAAGCTTCAGGGAAGGTCAATGAAATAGATCCACCTTTGTCTGCCTTAGCTGGAGTCAAGAAGAAAGGCAATGTACCGCAGGCTAAGGACATCATCAAGTTGGAAGCTGCAAAACAACAATCTGACAGGAGTGTCGGGGAGAAGAAACTCAGACTTCCTGGAGAGAAAGTTCCATTAGTAACAGAGTTATATGGTTACAATCTAAAGAGGGAAGAATTTGAGATCGAACATGACAACGATGCTGAGCAACTGCTTGCTGACATGGAATTTAAGGATTCTGACACAGATGCTGAGCGTGAGCAGAAACTGCAGGTTCTTCGTATTTACTCGAAAAGGCTTGATGAGAGGAAGCGGAGGAAGGAATTTGTTCTGGAAAGAAACTTGTTGTACCCTGATCAATATGAGATGAGCCTTTCAGCAGAGGAGAGAAAAATATATAAAAGCTGTAAAGTGTTTGCGCGGTTCCAATCCAAAGAAGAGCACAAGGAACTGATTAAGAAAGTCATTGAAGAGCACCAAATTCTCAGAAGAATCGAGGATCTTCAGGAAGCTAGAACTGCTGGTTGCAGGACAACTTCAGACGCAAATAGATTTATAGAAGAGAAGAGAAAGAAGGAAGCTGAAGAAAGTATGCTGCTGCGGCTTAACCACGGTGCACCAGGCAGTATAGCCGGTAAAACACTAAAAAGTCCAAGAGGGTTACCCAGAAATTTGCATCCCTTTGGTTCTGACTCACTGCCAAAGGTCACACCTCCAAGAATATACAGCGGTTTGGACACTTGGGATGTTGATGGTCTCCTTGGAGCTGACTTACTCTCAGAGACCGAAAAGAAGATGTGCAATGAGACCAGAATACTGCCTGTACACTATTTGAAGATGTTGGATATCTTAACAAGAGAAATAAAGAAGGGGCAGATAAAGAAAAAGTCTGATGCTTATAGCTTCTTCAAAGTAGAGCCGAGTAAAGTAGACAGAGTATATGATATGCTGGTTCATAAGGGAATAGGTGACTCAACATGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003682 GO:0003700 GO:0003712 GO:0003713 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0006325 GO:0006338 GO:0006355 GO:0006357 GO:0006996 GO:0008150 GO:0009889 GO:0009891 GO:0009893 GO:0009987 GO:0010468 GO:0010556 GO:0010557 GO:0010604 GO:0010638 GO:0016043 GO:0019219 GO:0019222 GO:0031056 GO:0031058 GO:0031323 GO:0031325 GO:0031326 GO:0031328 GO:0031399 GO:0031401 GO:0032268 GO:0032270 GO:0033043 GO:0033044 GO:0035065 GO:0035066 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044424 GO:0044464 GO:0045935 GO:0048518 GO:0048522 GO:0050789 GO:0050794 GO:0051128 GO:0051130 GO:0051171 GO:0051173 GO:0051246 GO:0051247 GO:0051252 GO:0051254 GO:0051276 GO:0060255 GO:0065007 GO:0071840 GO:0080090 GO:0140110 GO:1901983 GO:1901985 GO:1902275 GO:1902680 GO:1903506 GO:1903508 GO:1905269 GO:2000112 GO:2000756 GO:2000758 GO:2001141 GO:2001252

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Myb_DNA-binding ZZ

Protein Analysis

548

Amino Acids

62.04

Weight (kDa)

7.85

Isoelectric Point (pI)

47.32

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
ZZ	PF00569	30 - 61	8.3e-07	Zinc finger, ZZ type
ZZ_ADA2	PF25299	32 - 78	2.6e-14	ADA2 ZZ-type zing finger
Myb_DNA-binding	PF00249	89 - 131	2.2e-12	Myb-like DNA-binding domain
TADA2A-like_3rd	PF22941	252 - 321	6.5e-26	Transcriptional adapter 2-alpha-like domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0008729)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G07740 AT3G07740 AT3G07740 AT3G07740
fragaria_vesca	FvH4_6g40730 FvH4_6g40730 FvH4_6g40730
malus_domestica	MD17G1115800.v1.1
prunus_persica	Prupe.3G198800_v2.0.a1 Prupe.3G198800_v2.0.a1 Prupe.3G198800_v2.0.a1
pyrus_communis	pycom17g10700
rosa_chinensis	RchiOBHm_Chr2g0156181
rosa_laevigata	RLG00000020893
rosa_multiflora	Rmu_sc0000260.1_g000013
rosa_roxburghii	Rroxscaffold_2G00093170
rosa_rugosa	Rorug02G0452100 Rorug02G0452100
rosa_samantha	Rh2AG518800 Rh2BG530200 Rh2CG503800 Rh2DG539200
rosa_wichuraiana	Rw2G042730

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AasI	GACNNNNNNGTC	1 cut(s)	758
Acc36I	ACCTGC	2 cut(s)	577, 928
AccI	GTMKAC	1 cut(s)	1596
AccII	CGCG	1 cut(s)	1087
AccIII	TCCGGA	1 cut(s)	487
AciI	CCGC	6 cut(s)	98, 704, 979, 1087, 1267, 1395
AclWI	GGATC	2 cut(s)	650, 1173
AcsI	RAATTY	5 cut(s)	842, 893, 989, 1146, 1336
AcuI	CTGAAG	4 cut(s)	618, 1154, 1188, 1269
AfaI	GTAC	3 cut(s)	702, 1016, 1491
AfiI	CCNNNNNNNGG	1 cut(s)	361
AgsI	TTSAA	7 cut(s)	122, 199, 257, 451, 1136, 1501, 1576
AhdI	GACNNNNNGTC	1 cut(s)	304
AjnI	CCWGG	4 cut(s)	49, 142, 784, 1285
AloI	GAACNNNNNNTCC	2 cut(s)	780, 812
Alw21I	GWGCWC	3 cut(s)	1110, 1143, 1285
Alw26I	GTCTC	3 cut(s)	1427, 1442, 1466
Alw44I	GTGCAC	1 cut(s)	1281
AlwI	GGATC	2 cut(s)	650, 1173
AlwNI	CAGNNNCTG	2 cut(s)	917, 934
Aor13HI	TCCGGA	1 cut(s)	487
AoxI	GGCC	2 cut(s)	145, 363
ApaLI	GTGCAC	1 cut(s)	1281
ApeKI	GCWGC	5 cut(s)	95, 526, 734, 1261, 1264
ApoI	RAATTY	5 cut(s)	842, 893, 989, 1146, 1336
Asp700I	GAANNNNTTC	1 cut(s)	993
AspLEI	GCGC	1 cut(s)	1087
AspS9I	GGNCC	1 cut(s)	83
AsuHPI	GGTGA	3 cut(s)	272, 462, 1646
AsuII	TTCGAA	1 cut(s)	11
AvaII	GGWCC	1 cut(s)	83
BaeGI	GKGCMC	1 cut(s)	1285
BbsI	GAAGAC	1 cut(s)	45
Bbv12I	GWGCWC	3 cut(s)	1110, 1143, 1285
BbvCI	CCTCAGC	1 cut(s)	33
BbvI	GCAGC	5 cut(s)	82, 513, 721, 1248, 1251
BccI	CCATC	1 cut(s)	1412
BcgI	CGANNNNNNTGC	2 cut(s)	926, 960
BciT130I	CCWGG	4 cut(s)	51, 144, 786, 1287
BclI	TGATCA	1 cut(s)	1021
BcoDI	GTCTC	3 cut(s)	1427, 1442, 1466
BfaI	CTAG	2 cut(s)	17, 1179
BfmI	CTRYAG	1 cut(s)	935
BfuAI	ACCTGC	2 cut(s)	577, 928
BglII	AGATCT	1 cut(s)	175
BisI	GCNGC	7 cut(s)	96, 99, 527, 735, 1262, 1265, 1268
BlpI	GCTNAGC	2 cut(s)	870, 918
BlsI	GCNGC	7 cut(s)	97, 100, 528, 736, 1263, 1266, 1269
Bme1390I	CCNGG	4 cut(s)	51, 144, 786, 1287
Bme18I	GGWCC	1 cut(s)	83
BmeRI	GACNNNNNGTC	1 cut(s)	304
BmgT120I	GGNCC	1 cut(s)	83
BmiI	GGNNCC	2 cut(s)	84, 1091
BmrFI	CCNGG	4 cut(s)	51, 144, 786, 1287
BmsI	GCATC	5 cut(s)	110, 856, 904, 1351, 1549
BpiI	GAAGAC	1 cut(s)	45
BplI	GAGNNNNNCTC	2 cut(s)	571, 603
BpmI	CTGGAG	2 cut(s)	699, 807
Bpu10I	CCTNAGC	3 cut(s)	33, 673, 711
Bpu1102I	GCTNAGC	2 cut(s)	870, 918
Bpu14I	TTCGAA	1 cut(s)	11
BpuEI	CTTGAG	1 cut(s)	380
BsaBI	GATNNNNATC	1 cut(s)	174
BsaI	GGTCTC	3 cut(s)	1427, 1442, 1466
BsaJI	CCNNGG	2 cut(s)	1276, 1426
BsaWI	WCCGGW	2 cut(s)	113, 487
BsaXI	ACNNNNNCTCC	2 cut(s)	780, 810
Bsc4I	CCNNNNNNNGG	1 cut(s)	361
Bse118I	RCCGGY	1 cut(s)	1298
Bse3DI	GCAATG	3 cut(s)	366, 703, 1474
Bse8I	GATNNNNATC	1 cut(s)	174
BseAI	TCCGGA	1 cut(s)	487
BseBI	CCWGG	4 cut(s)	51, 144, 786, 1287
BseDI	CCNNGG	2 cut(s)	1276, 1426
BseGI	GGATG	2 cut(s)	1342, 1417
BseJI	GATNNNNATC	1 cut(s)	174
BseLI	CCNNNNNNNGG	1 cut(s)	361
BseMI	GCAATG	3 cut(s)	366, 703, 1474
BseMII	CTCAG	7 cut(s)	24, 78, 790, 861, 909, 1165, 1458
BseRI	GAGGAG	1 cut(s)	1064
BseSI	GKGCMC	1 cut(s)	1285
BseXI	GCAGC	5 cut(s)	82, 513, 721, 1248, 1251
BseYI	CCCAGC	1 cut(s)	125
BsgI	GTGCAG	1 cut(s)	570
Bsh1236I	CGCG	1 cut(s)	1087
BshFI	GGCC	2 cut(s)	147, 365
BsiHKAI	GWGCWC	3 cut(s)	1110, 1143, 1285
BsiSI	CCGG	3 cut(s)	114, 488, 1299
BslFI	GGGAC	1 cut(s)	481
BslI	CCNNNNNNNGG	1 cut(s)	361
BsmAI	GTCTC	3 cut(s)	1427, 1442, 1466
BsmFI	GGGAC	1 cut(s)	481
BsmI	GAATGC	3 cut(s)	97, 242, 340
BsnI	GGCC	2 cut(s)	147, 365
Bso31I	GGTCTC	3 cut(s)	1427, 1442, 1466
Bsp119I	TTCGAA	1 cut(s)	11
Bsp1286I	GDGCHC	3 cut(s)	1110, 1143, 1285
Bsp13I	TCCGGA	1 cut(s)	487
Bsp1407I	TGTACA	1 cut(s)	1489
Bsp143I	GATC	6 cut(s)	175, 223, 655, 849, 1021, 1165
Bsp1720I	GCTNAGC	2 cut(s)	870, 918
BspACI	CCGC	6 cut(s)	98, 704, 979, 1087, 1267, 1395
BspANI	GGCC	2 cut(s)	147, 365
BspCNI	CTCAG	7 cut(s)	25, 79, 789, 862, 910, 1164, 1457
BspEI	TCCGGA	1 cut(s)	487
BspFNI	CGCG	1 cut(s)	1087
BspLI	GGNNCC	2 cut(s)	84, 1091
BspMAI	CTGCAG	1 cut(s)	939
BspMI	ACCTGC	2 cut(s)	577, 928
BspPI	GGATC	2 cut(s)	650, 1173
BspQI	GCTCTTC	2 cut(s)	1098, 1131
BspT104I	TTCGAA	1 cut(s)	11
BspTNI	GGTCTC	3 cut(s)	1427, 1442, 1466
BsrDI	GCAATG	3 cut(s)	366, 703, 1474
BsrFI	RCCGGY	1 cut(s)	1298
BsrGI	TGTACA	1 cut(s)	1489
BssAI	RCCGGY	1 cut(s)	1298
BssECI	CCNNGG	2 cut(s)	1276, 1426
BssMI	GATC	6 cut(s)	175, 223, 655, 849, 1021, 1165
BssT1I	CCWWGG	1 cut(s)	1426
Bst2UI	CCWGG	4 cut(s)	51, 144, 786, 1287
Bst4CI	ACNGT	3 cut(s)	155, 278, 1280
Bst6I	CTCTTC	6 cut(s)	339, 591, 1098, 1131, 1221, 1226
BstAPI	GCANNNNNTGC	1 cut(s)	934
BstAUI	TGTACA	1 cut(s)	1489
BstBI	TTCGAA	1 cut(s)	11
BstC8I	GCNNGC	3 cut(s)	531, 708, 882
BstDEI	CTNAG	9 cut(s)	33, 87, 673, 711, 776, 870, 918, 1151, 1444
BstDSI	CCRYGG	1 cut(s)	1276
BstEII	GGTNACC	1 cut(s)	1326
BstENI	CCTNNNNNAGG	1 cut(s)	359
BstF5I	GGATG	2 cut(s)	1342, 1417
BstFNI	CGCG	1 cut(s)	1087
BstHHI	GCGC	1 cut(s)	1087
BstKTI	GATC	6 cut(s)	178, 226, 658, 852, 1024, 1168
BstMAI	GTCTC	3 cut(s)	1427, 1442, 1466
BstMBI	GATC	6 cut(s)	175, 223, 655, 849, 1021, 1165
BstMWI	GCNNNNNNNGC	3 cut(s)	934, 1184, 1267
BstNI	CCWGG	4 cut(s)	51, 144, 786, 1287
BstNSI	RCATGY	1 cut(s)	466
BstPI	GGTNACC	1 cut(s)	1326
BstSCI	CCNGG	4 cut(s)	49, 142, 784, 1285
BstSFI	CTRYAG	1 cut(s)	935
BstSLI	GKGCMC	1 cut(s)	1285
BstUI	CGCG	1 cut(s)	1087
BstV1I	GCAGC	5 cut(s)	82, 513, 721, 1248, 1251
BstV2I	GAAGAC	1 cut(s)	45
BstX2I	RGATCY	3 cut(s)	175, 655, 1165
BstXI	CCANNNNNNTGG	1 cut(s)	506
BstYI	RGATCY	3 cut(s)	175, 655, 1165
BsuRI	GGCC	2 cut(s)	147, 365
BtgI	CCRYGG	1 cut(s)	1276
BtsCI	GGATG	2 cut(s)	1342, 1417
BtsI	GCAGTG	1 cut(s)	1361
BtsIMutI	CAGTG	1 cut(s)	1361
BveI	ACCTGC	2 cut(s)	577, 928
Cac8I	GCNNGC	3 cut(s)	531, 708, 882
CaiI	CAGNNNCTG	2 cut(s)	917, 934
CfoI	GCGC	1 cut(s)	1087
Cfr10I	RCCGGY	1 cut(s)	1298
Cfr13I	GGNCC	1 cut(s)	83
CseI	GACGC	1 cut(s)	1217
Csp6I	GTAC	3 cut(s)	701, 1015, 1490
CspCI	CAANNNNNGTGG	2 cut(s)	100, 135
CviAII	CATG	6 cut(s)	410, 463, 474, 857, 889, 1644
CviQI	GTAC	3 cut(s)	701, 1015, 1490
DdeI	CTNAG	9 cut(s)	33, 87, 673, 711, 776, 870, 918, 1151, 1444
DpnI	GATC	6 cut(s)	177, 225, 657, 851, 1023, 1167
DpnII	GATC	6 cut(s)	175, 223, 655, 849, 1021, 1165
DrdI	GACNNNNNNGTC	1 cut(s)	758
DriI	GACNNNNNGTC	1 cut(s)	304
DseDI	GACNNNNNNGTC	1 cut(s)	758
Eam1104I	CTCTTC	6 cut(s)	339, 591, 1098, 1131, 1221, 1226
Eam1105I	GACNNNNNGTC	1 cut(s)	304
EarI	CTCTTC	6 cut(s)	339, 591, 1098, 1131, 1221, 1226
Eco130I	CCWWGG	1 cut(s)	1426
Eco31I	GGTCTC	3 cut(s)	1427, 1442, 1466
Eco32I	GATATC	2 cut(s)	75, 1513
Eco47I	GGWCC	1 cut(s)	83
Eco57I	CTGAAG	4 cut(s)	618, 1154, 1188, 1269
Eco91I	GGTNACC	1 cut(s)	1326
EcoNI	CCTNNNNNAGG	1 cut(s)	359
EcoO109I	RGGNCCY	1 cut(s)	83
EcoO65I	GGTNACC	1 cut(s)	1326
EcoRII	CCWGG	4 cut(s)	49, 142, 784, 1285
EcoRV	GATATC	2 cut(s)	75, 1513
EcoT14I	CCWWGG	1 cut(s)	1426
ErhI	CCWWGG	1 cut(s)	1426
FaeI	CATG	6 cut(s)	413, 466, 477, 860, 892, 1647
FaqI	GGGAC	1 cut(s)	481
FatI	CATG	6 cut(s)	409, 462, 473, 856, 888, 1643
FbaI	TGATCA	1 cut(s)	1021
FblI	GTMKAC	1 cut(s)	1596
Fnu4HI	GCNGC	7 cut(s)	96, 99, 527, 735, 1262, 1265, 1268
FokI	GGATG	2 cut(s)	1329, 1424
Fsp4HI	GCNGC	7 cut(s)	96, 99, 527, 735, 1262, 1265, 1268
FspBI	CTAG	2 cut(s)	17, 1179
GlaI	GCGC	1 cut(s)	1086
GluI	GCNGC	7 cut(s)	96, 99, 527, 735, 1262, 1265, 1268
GsaI	CCCAGC	1 cut(s)	129
GsuI	CTGGAG	2 cut(s)	699, 807
HaeIII	GGCC	2 cut(s)	147, 365
HapII	CCGG	3 cut(s)	114, 488, 1299
HgaI	GACGC	1 cut(s)	1217
HhaI	GCGC	1 cut(s)	1087
Hin1II	CATG	6 cut(s)	413, 466, 477, 860, 892, 1647
Hin6I	GCGC	1 cut(s)	1085
HinP1I	GCGC	1 cut(s)	1085
HindIII	AAGCTT	1 cut(s)	630
HinfI	GANTC	6 cut(s)	46, 681, 902, 1158, 1358, 1637
HpaII	CCGG	3 cut(s)	114, 488, 1299
HphI	GGTGA	3 cut(s)	272, 462, 1646
Hpy166II	GTNNAC	3 cut(s)	1283, 1492, 1597
Hpy188I	TCNGA	9 cut(s)	328, 751, 779, 907, 1154, 1207, 1357, 1447, 1558
Hpy188III	TCNNGA	6 cut(s)	86, 359, 488, 685, 998, 1172
Hpy8I	GTNNAC	3 cut(s)	1283, 1492, 1597
HpyAV	CCTTC	5 cut(s)	365, 634, 979, 1234, 1528
HpyCH4III	ACNGT	3 cut(s)	155, 278, 1280
HpyF10VI	GCNNNNNNNGC	3 cut(s)	934, 1184, 1267
HpyF3I	CTNAG	9 cut(s)	33, 87, 673, 711, 776, 870, 918, 1151, 1444
Hsp92II	CATG	6 cut(s)	413, 466, 477, 860, 892, 1647
HspAI	GCGC	1 cut(s)	1085
Kpn2I	TCCGGA	1 cut(s)	487
Ksp22I	TGATCA	1 cut(s)	1021
Kzo9I	GATC	6 cut(s)	175, 223, 655, 849, 1021, 1165
LguI	GCTCTTC	2 cut(s)	1098, 1131
LmnI	GCTCC	1 cut(s)	1430
Lsp1109I	GCAGC	5 cut(s)	82, 513, 721, 1248, 1251
LweI	GCATC	5 cut(s)	110, 856, 904, 1351, 1549
MaeI	CTAG	2 cut(s)	17, 1179
MalI	GATC	6 cut(s)	177, 225, 657, 851, 1023, 1167
MboI	GATC	6 cut(s)	175, 223, 655, 849, 1021, 1165
MfeI	CAATTG	1 cut(s)	388
MflI	RGATCY	3 cut(s)	175, 655, 1165
MhlI	GDGCHC	3 cut(s)	1110, 1143, 1285
MlyI	GAGTC	3 cut(s)	690, 1352, 1631
MmeI	TCCRAC	2 cut(s)	708, 1488
MroI	TCCGGA	1 cut(s)	487
MroXI	GAANNNNTTC	1 cut(s)	993
MseI	TTAA	6 cut(s)	261, 441, 897, 1122, 1272, 1517
MspA1I	CMGCKG	2 cut(s)	614, 1395
MspI	CCGG	3 cut(s)	114, 488, 1299
MspR9I	CCNGG	4 cut(s)	51, 144, 786, 1287
MunI	CAATTG	1 cut(s)	388
Mva1269I	GAATGC	3 cut(s)	97, 242, 340
MvaI	CCWGG	4 cut(s)	51, 144, 786, 1287
MvnI	CGCG	1 cut(s)	1087
MwoI	GCNNNNNNNGC	3 cut(s)	934, 1184, 1267
NdeII	GATC	6 cut(s)	175, 223, 655, 849, 1021, 1165
NlaIII	CATG	6 cut(s)	413, 466, 477, 860, 892, 1647
NlaIV	GGNNCC	2 cut(s)	84, 1091
NmeAIII	GCCGAG	1 cut(s)	1611
NmuCI	GTSAC	5 cut(s)	266, 278, 468, 1372, 1634
NspI	RCATGY	1 cut(s)	466
NspV	TTCGAA	1 cut(s)	11
PciSI	GCTCTTC	2 cut(s)	1098, 1131
PctI	GAATGC	3 cut(s)	97, 242, 340
PdmI	GAANNNNTTC	1 cut(s)	993
PfeI	GAWTC	3 cut(s)	46, 902, 1158
PfoI	TCCNGGA	2 cut(s)	49, 784
PkrI	GCNGC	7 cut(s)	97, 100, 528, 736, 1263, 1266, 1269
PleI	GAGTC	3 cut(s)	689, 1352, 1631
PpsI	GAGTC	3 cut(s)	689, 1352, 1631
PpuMI	RGGWCCY	1 cut(s)	83
Psp5II	RGGWCCY	1 cut(s)	83
Psp6I	CCWGG	4 cut(s)	49, 142, 784, 1285
PspEI	GGTNACC	1 cut(s)	1326
PspFI	CCCAGC	1 cut(s)	125
PspGI	CCWGG	4 cut(s)	49, 142, 784, 1285
PspN4I	GGNNCC	2 cut(s)	84, 1091
PspPI	GGNCC	1 cut(s)	83
PspPPI	RGGWCCY	1 cut(s)	83
PstI	CTGCAG	1 cut(s)	939
PstNI	CAGNNNCTG	2 cut(s)	917, 934
PsuI	RGATCY	3 cut(s)	175, 655, 1165
PvuII	CAGCTG	1 cut(s)	614
RsaI	GTAC	3 cut(s)	702, 1016, 1491
RsaNI	GTAC	3 cut(s)	701, 1015, 1490
SapI	GCTCTTC	2 cut(s)	1098, 1131
SaqAI	TTAA	6 cut(s)	261, 441, 897, 1122, 1272, 1517
SatI	GCNGC	7 cut(s)	96, 99, 527, 735, 1262, 1265, 1268
Sau3AI	GATC	6 cut(s)	175, 223, 655, 849, 1021, 1165
Sau96I	GGNCC	1 cut(s)	83
SchI	GAGTC	3 cut(s)	690, 1352, 1631
ScrFI	CCNGG	4 cut(s)	51, 144, 786, 1287
SduI	GDGCHC	3 cut(s)	1110, 1143, 1285
SfaNI	GCATC	5 cut(s)	110, 856, 904, 1351, 1549
SfcI	CTRYAG	1 cut(s)	935
SfuI	TTCGAA	1 cut(s)	11
SinI	GGWCC	1 cut(s)	83
SmlI	CTYRAG	1 cut(s)	359
SmoI	CTYRAG	1 cut(s)	359
SsiI	CCGC	6 cut(s)	98, 704, 979, 1087, 1267, 1395
SspMI	CTAG	2 cut(s)	17, 1179
StyD4I	CCNGG	4 cut(s)	49, 142, 784, 1285
StyI	CCWWGG	1 cut(s)	1426
TaaI	ACNGT	3 cut(s)	155, 278, 1280
TaqI	TCGA	4 cut(s)	11, 852, 956, 1161
TaqII	GACCGA	1 cut(s)	1466
TatI	WGTACW	1 cut(s)	1489
TauI	GCSGC	2 cut(s)	101, 1270
TfiI	GAWTC	3 cut(s)	46, 902, 1158
Tru1I	TTAA	6 cut(s)	261, 441, 897, 1122, 1272, 1517
Tru9I	TTAA	6 cut(s)	261, 441, 897, 1122, 1272, 1517
TscAI	CASTG	1 cut(s)	1368
TseFI	GTSAC	5 cut(s)	266, 278, 468, 1372, 1634
TseI	GCWGC	5 cut(s)	95, 526, 734, 1261, 1264
Tsp45I	GTSAC	5 cut(s)	266, 278, 468, 1372, 1634
TspDTI	ATGAA	3 cut(s)	357, 663, 1610
TspRI	CASTG	1 cut(s)	1368
VneI	GTGCAC	1 cut(s)	1281
VpaK11BI	GGWCC	1 cut(s)	83
XagI	CCTNNNNNAGG	1 cut(s)	359
XapI	RAATTY	5 cut(s)	842, 893, 989, 1146, 1336
XceI	RCATGY	1 cut(s)	466
XmiI	GTMKAC	1 cut(s)	1596
XmnI	GAANNNNTTC	1 cut(s)	993
XspI	CTAG	2 cut(s)	17, 1179

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.