Basic Information

Type: gene

Biological Identity

Species

rosa_roxburghii

Chromosome

GWHEROQ00000002

Orthogroup ID

OG0008729

Physical Location & Seq

Genomic Coordinates Forward (+)

14608063 .. 14613278

Gene Structure 5216 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rroxscaffold_2G00093170.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1674 bp

ATGGGTCGGTCCCGGGCAGTTGCGCAATCCGCTGCCGGCGATTCCAGTCAGAGTAGAGGTAAAAGAAAGAGAACAGCTTCAGGTGCAGAACTAGCTGAGAATAGTGGTACAGCTCACAAAGGTTTAGCCCAGGAGCTTAGCGAACCCAAAGGGGCTTTTTACCATTGTAATTATTGCCAGAAAGATATATCTGGGAAGATACGTATAAAATGTGGGGTGTGTCCAGATTTTGATCTTTGCATTGAGTGCTTCTCTGTTGGAGTTGAGGTTACACCTCACAAATGTAATCATCCATATAGGGTTATGGACAATTTGTCTTTTCCACTAATATGTCCTGATTGGAATGCTGATGAAGAGATGCTATTGCTTGAGGGTATTGAAATGTATGGCTTTGGTAATTGGACTGAAGTTTCTGAACATGTTGGAACAAGAAGAAGGCAACAGTGTATCGACCACTATAATGCTATATATCTGAACTCCCCTTGCTTTCCTCTCCCAGACATGTCTCATGTTATGGGAAAGAGCAGAGAGGATCTTCTTGCCTTGGCTAAGGGGTCTGGTGAAATCAAAAAAGAGCTCCCCATGTTTATGGAGATAACTCTGAAAGAAGTATCTCCTTTTTCTGCAGGAGTCAAATGCGAAGAACCAAAGAAGACTGCTGCTTCTAAATCTTCATCCCACTCAACTGCTGATGGTGCATCTGGAGCTGGAAAGAAGGCCTCCAATAAACTTCAGATGAAGGATGAACCTAAAGTCACTAAAGTGGAAGAATCTCAGCGGAGCATTGGAGGGAAAAAACTTAGGAGTGTAGTGGAGGAGGGACCTTCTGTGACAGAATTGAGTGGCTATAATTACAAGAGGCAAGAGTTTGAAATTGAATACGATAATGATGCTGAGCAGATACTAGCAGATATGGAATTTCTCGATACTGACACTGATCGTGACCGTGAATTAAAACTACGAGTTCTGCATGTCTACGGAAAAAGGCTTGATGAGAGGAAACGCAGGAAGGATTTCGTACTAGAAAGAAATCTGCTTCATCCTGATCCATTGGAGAAGAACCTCTCGCCGGAAGTGAGAGAAATATACCAGCACTTCAAGGTCTTCATGCGGTTCCACTCAAATGAAGACCACAAGGAGTTGCTTAAGAGTATCATTGAGGAACAACAAATTGTCAAAAGAATTCTAGATCTTCAGGAGGCACGAGCTGCAGGGTGTAGAACAGCTGCTGAGGCAAGTAAATATCTTGAGCAGAAAAGAAAGAATGAAATTGAAGAAAGTTTGCAAAAGATTAAGGAAAACTCTCAGGCCGGTGCAAGTGGTAAAGTCTTGCAGCAGATCAGTCCTCGGGGAGCCGTTAGGGGATCAGCAAATCTGCATCCTGGCATCAAGGACTTACCATTAACTACGCAACCTATTCCAAACCCCTTGGATGATTGGGATATCAGTGGACTAGCGGGAGCTAACTTACTTTCTGAAACCGACAAAAGGCTTTGCTGTGAGTTAAGAATCCTACCATCCCATTATCTACACATGCTCCAGACCATCTCGACAGAGATTTCAAGCGGGAATGTGAAGAAGAAATCCGACGCCCACAGCCTCTTCAAGGTTGAGCCAAGCAAAGTGAATAGAGTTTACGATATGGTAATTCAAAAGGGACTGACCCTAGCATAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003682 GO:0003700 GO:0003712 GO:0003713 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0006325 GO:0006338 GO:0006355 GO:0006357 GO:0006996 GO:0008150 GO:0009889 GO:0009891 GO:0009893 GO:0009987 GO:0010468 GO:0010556 GO:0010557 GO:0010604 GO:0010638 GO:0016043 GO:0019219 GO:0019222 GO:0031056 GO:0031058 GO:0031323 GO:0031325 GO:0031326 GO:0031328 GO:0031399 GO:0031401 GO:0032268 GO:0032270 GO:0033043 GO:0033044 GO:0035065 GO:0035066 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044424 GO:0044464 GO:0045935 GO:0048518 GO:0048522 GO:0050789 GO:0050794 GO:0051128 GO:0051130 GO:0051171 GO:0051173 GO:0051246 GO:0051247 GO:0051252 GO:0051254 GO:0051276 GO:0060255 GO:0065007 GO:0071840 GO:0080090 GO:0140110 GO:1901983 GO:1901985 GO:1902275 GO:1902680 GO:1903506 GO:1903508 GO:1905269 GO:2000112 GO:2000756 GO:2000758 GO:2001141 GO:2001252

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Myb_DNA-binding ZZ

Protein Analysis

557

Amino Acids

62.49

Weight (kDa)

7.24

Isoelectric Point (pI)

50.3

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
ZZ	PF00569	54 - 86	1e-07	Zinc finger, ZZ type
ZZ_ADA2	PF25299	56 - 102	3.1e-13	ADA2 ZZ-type zing finger
Myb_DNA-binding	PF00249	113 - 154	1.6e-11	Myb-like DNA-binding domain
Myb_DNA-bind_6	PF13921	114 - 157	2.8e-06	Myb-like DNA-binding domain
TADA2A-like_3rd	PF22941	280 - 350	3.3e-26	Transcriptional adapter 2-alpha-like domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0008729)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G07740 AT3G07740 AT3G07740 AT3G07740
fragaria_vesca	FvH4_6g40730 FvH4_6g40730 FvH4_6g40730
malus_domestica	MD17G1115800.v1.1
prunus_persica	Prupe.3G198800_v2.0.a1 Prupe.3G198800_v2.0.a1 Prupe.3G198800_v2.0.a1
pyrus_communis	pycom17g10700
rosa_chinensis	RchiOBHm_Chr2g0156181
rosa_laevigata	RLG00000020893
rosa_multiflora	Rmu_sc0000260.1_g000013
rosa_roxburghii	Rroxscaffold_2G00093170
rosa_rugosa	Rorug02G0452100 Rorug02G0452100
rosa_samantha	Rh2AG518800 Rh2BG530200 Rh2CG503800 Rh2DG539200
rosa_wichuraiana	Rw2G042730

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
Acc16I	TGCGCA	1 cut(s)	24
AccI	GTMKAC	1 cut(s)	975
AciI	CCGC	5 cut(s)	30, 778, 1111, 1457, 1566
AclWI	GGATC	3 cut(s)	540, 1040, 1372
AcsI	RAATTY	2 cut(s)	917, 1182
AcuI	CTGAAG	4 cut(s)	63, 426, 716, 1178
AcyI	GRCGYC	1 cut(s)	1590
AfaI	GTAC	2 cut(s)	109, 1020
AfiI	CCNNNNNNNGG	3 cut(s)	1069, 1488, 1606
AflII	CTTAAG	1 cut(s)	1145
AflIII	ACRYGT	2 cut(s)	418, 501
AgsI	TTSAA	8 cut(s)	380, 872, 878, 1099, 1274, 1563, 1606, 1652
AhdI	GACNNNNNGTC	1 cut(s)	313
AjnI	CCWGG	2 cut(s)	129, 1381
AleI	CACNNNNGTG	1 cut(s)	761
AluBI	AGCT	9 cut(s)	77, 95, 113, 136, 577, 707, 1208, 1226, 1463
AluI	AGCT	9 cut(s)	77, 95, 113, 136, 577, 707, 1208, 1226, 1463
Alw21I	GWGCWC	1 cut(s)	579
Alw26I	GTCTC	1 cut(s)	510
AlwI	GGATC	3 cut(s)	540, 1040, 1372
AlwNI	CAGNNNCTG	1 cut(s)	1229
Ama87I	CYCGRG	2 cut(s)	12, 1347
AoxI	GGCC	2 cut(s)	717, 1308
ApeKI	GCWGC	5 cut(s)	32, 659, 1208, 1226, 1333
ApoI	RAATTY	2 cut(s)	917, 1182
Asp700I	GAANNNNTTC	2 cut(s)	76, 1013
AspLEI	GCGC	1 cut(s)	25
AspS9I	GGNCC	2 cut(s)	9, 821
AsuC2I	CCSGG	2 cut(s)	13, 14
AsuHPI	GGTGA	1 cut(s)	572
AvaI	CYCGRG	2 cut(s)	12, 1347
AvaII	GGWCC	2 cut(s)	9, 821
BanII	GRGCYC	1 cut(s)	579
BauI	CACGAG	1 cut(s)	1203
BbsI	GAAGAC	3 cut(s)	659, 1096, 1134
Bbv12I	GWGCWC	1 cut(s)	579
BbvCI	CCTCAGC	1 cut(s)	1230
BbvI	GCAGC	5 cut(s)	19, 646, 1195, 1213, 1345
BccI	CCATC	3 cut(s)	686, 1525, 1553
BceAI	ACGGC	1 cut(s)	1340
BcgI	CGANNNNNNTGC	2 cut(s)	872, 906
BciT130I	CCWGG	2 cut(s)	131, 1383
BcnI	CCSGG	2 cut(s)	13, 14
BcoDI	GTCTC	1 cut(s)	510
BfaI	CTAG	6 cut(s)	92, 905, 1022, 1187, 1454, 1667
BfmI	CTRYAG	2 cut(s)	624, 1209
BfrI	CTTAAG	1 cut(s)	1145
BglII	AGATCT	1 cut(s)	1189
BisI	GCNGC	5 cut(s)	33, 660, 1209, 1227, 1334
BlpI	GCTNAGC	2 cut(s)	137, 894
BlsI	GCNGC	5 cut(s)	34, 661, 1210, 1228, 1335
Bme1390I	CCNGG	4 cut(s)	13, 14, 131, 1383
Bme18I	GGWCC	2 cut(s)	9, 821
BmeRI	GACNNNNNGTC	1 cut(s)	313
BmeT110I	CYCGRG	2 cut(s)	12, 1347
BmgT120I	GGNCC	2 cut(s)	9, 821
BmiI	GGNNCC	4 cut(s)	11, 822, 1115, 1354
BmrFI	CCNGG	4 cut(s)	13, 14, 131, 1383
BmsI	GCATC	5 cut(s)	348, 707, 880, 1387, 1395
BpiI	GAAGAC	3 cut(s)	659, 1096, 1134
BplI	GAGNNNNNCTC	2 cut(s)	236, 268
BpmI	CTGGAG	2 cut(s)	723, 1523
Bpu10I	CCTNAGC	2 cut(s)	549, 1230
Bpu1102I	GCTNAGC	2 cut(s)	137, 894
BpuEI	CTTGAG	2 cut(s)	389, 1268
BpuMI	CCSGG	2 cut(s)	13, 14
BsaAI	YACGTR	1 cut(s)	203
BsaBI	GATNNNNATC	1 cut(s)	231
BsaHI	GRCGYC	1 cut(s)	1590
BsaJI	CCNNGG	5 cut(s)	12, 129, 543, 1346, 1428
BsaXI	ACNNNNNCTCC	4 cut(s)	252, 282, 1521, 1551
Bsc4I	CCNNNNNNNGG	3 cut(s)	1069, 1488, 1606
Bse118I	RCCGGY	2 cut(s)	35, 1310
Bse1I	ACTGG	1 cut(s)	45
Bse8I	GATNNNNATC	1 cut(s)	231
BseBI	CCWGG	2 cut(s)	131, 1383
BseDI	CCNNGG	5 cut(s)	12, 129, 543, 1346, 1428
BseGI	GGATG	7 cut(s)	289, 674, 748, 1039, 1378, 1438, 1517
BseJI	GATNNNNATC	1 cut(s)	231
BseLI	CCNNNNNNNGG	3 cut(s)	1069, 1488, 1606
BseMII	CTCAG	5 cut(s)	87, 788, 885, 1221, 1319
BseNI	ACTGG	1 cut(s)	45
BseRI	GAGGAG	1 cut(s)	830
BseXI	GCAGC	5 cut(s)	19, 646, 1195, 1213, 1345
BsgI	GTGCAG	1 cut(s)	105
BshFI	GGCC	2 cut(s)	719, 1310
BsiHKAI	GWGCWC	1 cut(s)	579
BsiHKCI	CYCGRG	2 cut(s)	12, 1347
BsiSI	CCGG	4 cut(s)	13, 36, 1070, 1311
BslFI	GGGAC	1 cut(s)	834
BslI	CCNNNNNNNGG	3 cut(s)	1069, 1488, 1606
BsmAI	GTCTC	1 cut(s)	510
BsmFI	GGGAC	1 cut(s)	834
BsmI	GAATGC	1 cut(s)	349
BsnI	GGCC	2 cut(s)	719, 1310
BsoBI	CYCGRG	2 cut(s)	12, 1347
Bsp1286I	GDGCHC	1 cut(s)	579
Bsp143I	GATC	7 cut(s)	232, 532, 937, 1045, 1189, 1338, 1364
Bsp1720I	GCTNAGC	2 cut(s)	137, 894
BspACI	CCGC	5 cut(s)	30, 778, 1111, 1457, 1566
BspANI	GGCC	2 cut(s)	719, 1310
BspCNI	CTCAG	5 cut(s)	88, 787, 886, 1222, 1318
BspLI	GGNNCC	4 cut(s)	11, 822, 1115, 1354
BspMAI	CTGCAG	2 cut(s)	628, 1213
BspPI	GGATC	3 cut(s)	540, 1040, 1372
BspTI	CTTAAG	1 cut(s)	1145
BsrFI	RCCGGY	2 cut(s)	35, 1310
BsrI	ACTGG	1 cut(s)	45
BssAI	RCCGGY	2 cut(s)	35, 1310
BssECI	CCNNGG	5 cut(s)	12, 129, 543, 1346, 1428
BssMI	GATC	7 cut(s)	232, 532, 937, 1045, 1189, 1338, 1364
BssNI	GRCGYC	1 cut(s)	1590
BssSI	CACGAG	1 cut(s)	1203
BssT1I	CCWWGG	2 cut(s)	543, 1428
Bst2BI	CACGAG	1 cut(s)	1203
Bst2UI	CCWGG	2 cut(s)	131, 1383
Bst4CI	ACNGT	2 cut(s)	444, 947
Bst6I	CTCTTC	2 cut(s)	348, 1607
BstACI	GRCGYC	1 cut(s)	1590
BstAFI	CTTAAG	1 cut(s)	1145
BstAPI	GCANNNNNTGC	2 cut(s)	246, 1208
BstBAI	YACGTR	1 cut(s)	203
BstC8I	GCNNGC	1 cut(s)	37
BstDEI	CTNAG	8 cut(s)	96, 137, 549, 774, 800, 894, 1230, 1305
BstENI	CCTNNNNNAGG	1 cut(s)	1604
BstF5I	GGATG	7 cut(s)	289, 674, 748, 1039, 1378, 1438, 1517
BstHHI	GCGC	1 cut(s)	25
BstKTI	GATC	7 cut(s)	235, 535, 940, 1048, 1192, 1341, 1367
BstMAI	GTCTC	1 cut(s)	510
BstMBI	GATC	7 cut(s)	232, 532, 937, 1045, 1189, 1338, 1364
BstMWI	GCNNNNNNNGC	8 cut(s)	29, 83, 92, 246, 695, 704, 1208, 1232
BstNI	CCWGG	2 cut(s)	131, 1383
BstNSI	RCATGY	4 cut(s)	422, 505, 974, 1537
BstSCI	CCNGG	4 cut(s)	11, 12, 129, 1381
BstSFI	CTRYAG	2 cut(s)	624, 1209
BstSNI	TACGTA	1 cut(s)	203
BstV1I	GCAGC	5 cut(s)	19, 646, 1195, 1213, 1345
BstV2I	GAAGAC	3 cut(s)	659, 1096, 1134
BstX2I	RGATCY	2 cut(s)	532, 1189
BstXI	CCANNNNNNTGG	1 cut(s)	589
BstYI	RGATCY	2 cut(s)	532, 1189
BsuRI	GGCC	2 cut(s)	719, 1310
BtsCI	GGATG	7 cut(s)	289, 674, 748, 1039, 1378, 1438, 1517
BtsIMutI	CAGTG	3 cut(s)	449, 933, 1453
Cac8I	GCNNGC	1 cut(s)	37
CaiI	CAGNNNCTG	1 cut(s)	1229
CfoI	GCGC	1 cut(s)	25
Cfr10I	RCCGGY	2 cut(s)	35, 1310
Cfr13I	GGNCC	2 cut(s)	9, 821
Cfr9I	CCCGGG	1 cut(s)	12
CseI	GACGC	1 cut(s)	1598
Csp6I	GTAC	2 cut(s)	108, 1019
CviAII	CATG	7 cut(s)	419, 502, 509, 583, 971, 1108, 1534
CviQI	GTAC	2 cut(s)	108, 1019
DdeI	CTNAG	8 cut(s)	96, 137, 549, 774, 800, 894, 1230, 1305
DpnI	GATC	7 cut(s)	234, 534, 939, 1047, 1191, 1340, 1366
DpnII	GATC	7 cut(s)	232, 532, 937, 1045, 1189, 1338, 1364
DriI	GACNNNNNGTC	1 cut(s)	313
Eam1104I	CTCTTC	2 cut(s)	348, 1607
Eam1105I	GACNNNNNGTC	1 cut(s)	313
EarI	CTCTTC	2 cut(s)	348, 1607
Ecl136II	GAGCTC	1 cut(s)	577
Eco105I	TACGTA	1 cut(s)	203
Eco130I	CCWWGG	2 cut(s)	543, 1428
Eco147I	AGGCCT	1 cut(s)	719
Eco24I	GRGCYC	1 cut(s)	579
Eco32I	GATATC	1 cut(s)	1444
Eco47I	GGWCC	2 cut(s)	9, 821
Eco53kI	GAGCTC	1 cut(s)	577
Eco57I	CTGAAG	4 cut(s)	63, 426, 716, 1178
Eco88I	CYCGRG	2 cut(s)	12, 1347
EcoICRI	GAGCTC	1 cut(s)	577
EcoNI	CCTNNNNNAGG	1 cut(s)	1604
EcoO109I	RGGNCCY	1 cut(s)	821
EcoRI	GAATTC	1 cut(s)	1182
EcoRII	CCWGG	2 cut(s)	129, 1381
EcoRV	GATATC	1 cut(s)	1444
EcoT14I	CCWWGG	2 cut(s)	543, 1428
EcoT38I	GRGCYC	1 cut(s)	579
ErhI	CCWWGG	2 cut(s)	543, 1428
FaeI	CATG	7 cut(s)	422, 505, 512, 586, 974, 1111, 1537
FaqI	GGGAC	1 cut(s)	834
FatI	CATG	7 cut(s)	418, 501, 508, 582, 970, 1107, 1533
FauI	CCCGC	2 cut(s)	1450, 1559
FblI	GTMKAC	1 cut(s)	975
Fnu4HI	GCNGC	5 cut(s)	33, 660, 1209, 1227, 1334
FokI	GGATG	7 cut(s)	276, 661, 755, 1026, 1365, 1445, 1504
FriOI	GRGCYC	1 cut(s)	579
Fsp4HI	GCNGC	5 cut(s)	33, 660, 1209, 1227, 1334
FspBI	CTAG	6 cut(s)	92, 905, 1022, 1187, 1454, 1667
FspI	TGCGCA	1 cut(s)	24
GlaI	GCGC	1 cut(s)	24
GluI	GCNGC	5 cut(s)	33, 660, 1209, 1227, 1334
GsuI	CTGGAG	2 cut(s)	723, 1523
HaeIII	GGCC	2 cut(s)	719, 1310
HapII	CCGG	4 cut(s)	13, 36, 1070, 1311
HgaI	GACGC	1 cut(s)	1598
HhaI	GCGC	1 cut(s)	25
Hin1I	GRCGYC	1 cut(s)	1590
Hin1II	CATG	7 cut(s)	422, 505, 512, 586, 974, 1111, 1537
Hin6I	GCGC	1 cut(s)	23
HinP1I	GCGC	1 cut(s)	23
HinfI	GANTC	4 cut(s)	41, 630, 770, 1509
HpaII	CCGG	4 cut(s)	13, 36, 1070, 1311
HphI	GGTGA	1 cut(s)	572
Hpy166II	GTNNAC	3 cut(s)	976, 1451, 1636
Hpy188I	TCNGA	7 cut(s)	51, 415, 474, 603, 735, 1477, 1588
Hpy8I	GTNNAC	3 cut(s)	976, 1451, 1636
Hpy99I	CGWCG	1 cut(s)	1592
HpyAV	CCTTC	5 cut(s)	429, 709, 733, 834, 1003
HpyCH4III	ACNGT	2 cut(s)	444, 947
HpyCH4IV	ACGT	1 cut(s)	202
HpyF10VI	GCNNNNNNNGC	8 cut(s)	29, 83, 92, 246, 695, 704, 1208, 1232
HpyF3I	CTNAG	8 cut(s)	96, 137, 549, 774, 800, 894, 1230, 1305
HpySE526I	ACGT	1 cut(s)	202
Hsp92I	GRCGYC	1 cut(s)	1590
Hsp92II	CATG	7 cut(s)	422, 505, 512, 586, 974, 1111, 1537
HspAI	GCGC	1 cut(s)	23
KroI	GCCGGC	1 cut(s)	35
KroNI	GCCGGC	1 cut(s)	37
Kzo9I	GATC	7 cut(s)	232, 532, 937, 1045, 1189, 1338, 1364
LmnI	GCTCC	7 cut(s)	133, 582, 704, 780, 1352, 1460, 1542
Lsp1109I	GCAGC	5 cut(s)	19, 646, 1195, 1213, 1345
LweI	GCATC	5 cut(s)	348, 707, 880, 1387, 1395
MaeI	CTAG	6 cut(s)	92, 905, 1022, 1187, 1454, 1667
MaeII	ACGT	1 cut(s)	202
MaeIII	GTNAC	4 cut(s)	268, 754, 829, 941
MalI	GATC	7 cut(s)	234, 534, 939, 1047, 1191, 1340, 1366
MboI	GATC	7 cut(s)	232, 532, 937, 1045, 1189, 1338, 1364
MflI	RGATCY	2 cut(s)	532, 1189
MhlI	GDGCHC	1 cut(s)	579
MlyI	GAGTC	1 cut(s)	639
MmeI	TCCRAC	3 cut(s)	238, 403, 1611
MroNI	GCCGGC	1 cut(s)	35
MroXI	GAANNNNTTC	2 cut(s)	76, 1013
MseI	TTAA	5 cut(s)	953, 1146, 1293, 1403, 1505
MslI	CAYNNNNRTG	5 cut(s)	328, 459, 587, 761, 1122
MspA1I	CMGCKG	3 cut(s)	32, 778, 1226
MspCI	CTTAAG	1 cut(s)	1145
MspI	CCGG	4 cut(s)	13, 36, 1070, 1311
MspR9I	CCNGG	4 cut(s)	13, 14, 131, 1383
Mva1269I	GAATGC	1 cut(s)	349
MvaI	CCWGG	2 cut(s)	131, 1383
MwoI	GCNNNNNNNGC	8 cut(s)	29, 83, 92, 246, 695, 704, 1208, 1232
NaeI	GCCGGC	1 cut(s)	37
NciI	CCSGG	2 cut(s)	13, 14
NdeII	GATC	7 cut(s)	232, 532, 937, 1045, 1189, 1338, 1364
NgoMIV	GCCGGC	1 cut(s)	35
NlaIII	CATG	7 cut(s)	422, 505, 512, 586, 974, 1111, 1537
NlaIV	GGNNCC	4 cut(s)	11, 822, 1115, 1354
NmuCI	GTSAC	3 cut(s)	754, 829, 941
NsbI	TGCGCA	1 cut(s)	24
NspI	RCATGY	4 cut(s)	422, 505, 974, 1537
OliI	CACNNNNGTG	1 cut(s)	761
PceI	AGGCCT	1 cut(s)	719
PciI	ACATGT	2 cut(s)	418, 501
PctI	GAATGC	1 cut(s)	349
PdiI	GCCGGC	1 cut(s)	37
PdmI	GAANNNNTTC	2 cut(s)	76, 1013
PfeI	GAWTC	3 cut(s)	41, 770, 1509
PkrI	GCNGC	5 cut(s)	34, 661, 1210, 1228, 1335
PleI	GAGTC	1 cut(s)	638
PpsI	GAGTC	1 cut(s)	638
Ppu21I	YACGTR	1 cut(s)	203
PpuMI	RGGWCCY	1 cut(s)	821
PscI	ACATGT	2 cut(s)	418, 501
Psp124BI	GAGCTC	1 cut(s)	579
Psp5II	RGGWCCY	1 cut(s)	821
Psp6I	CCWGG	2 cut(s)	129, 1381
PspGI	CCWGG	2 cut(s)	129, 1381
PspN4I	GGNNCC	4 cut(s)	11, 822, 1115, 1354
PspPI	GGNCC	2 cut(s)	9, 821
PspPPI	RGGWCCY	1 cut(s)	821
PstI	CTGCAG	2 cut(s)	628, 1213
PstNI	CAGNNNCTG	1 cut(s)	1229
PsuI	RGATCY	2 cut(s)	532, 1189
PvuII	CAGCTG	1 cut(s)	1226
RsaI	GTAC	2 cut(s)	109, 1020
RsaNI	GTAC	2 cut(s)	108, 1019
RseI	CAYNNNNRTG	5 cut(s)	328, 459, 587, 761, 1122
SacI	GAGCTC	1 cut(s)	579
SaqAI	TTAA	5 cut(s)	953, 1146, 1293, 1403, 1505
SatI	GCNGC	5 cut(s)	33, 660, 1209, 1227, 1334
Sau3AI	GATC	7 cut(s)	232, 532, 937, 1045, 1189, 1338, 1364
Sau96I	GGNCC	2 cut(s)	9, 821
SchI	GAGTC	1 cut(s)	639
ScrFI	CCNGG	4 cut(s)	13, 14, 131, 1383
SduI	GDGCHC	1 cut(s)	579
SfaNI	GCATC	5 cut(s)	348, 707, 880, 1387, 1395
SfcI	CTRYAG	2 cut(s)	624, 1209
SinI	GGWCC	2 cut(s)	9, 821
SmaI	CCCGGG	1 cut(s)	14
SmiMI	CAYNNNNRTG	5 cut(s)	328, 459, 587, 761, 1122
SmlI	CTYRAG	3 cut(s)	368, 1145, 1247
SmoI	CTYRAG	3 cut(s)	368, 1145, 1247
SnaBI	TACGTA	1 cut(s)	203
SseBI	AGGCCT	1 cut(s)	719
SsiI	CCGC	5 cut(s)	30, 778, 1111, 1457, 1566
SspMI	CTAG	6 cut(s)	92, 905, 1022, 1187, 1454, 1667
SstI	GAGCTC	1 cut(s)	579
StuI	AGGCCT	1 cut(s)	719
StyD4I	CCNGG	4 cut(s)	11, 12, 129, 1381
StyI	CCWWGG	2 cut(s)	543, 1428
TaaI	ACNGT	2 cut(s)	444, 947
TaiI	ACGT	1 cut(s)	205
TaqI	TCGA	3 cut(s)	450, 924, 1550
TfiI	GAWTC	3 cut(s)	41, 770, 1509
Tru1I	TTAA	5 cut(s)	953, 1146, 1293, 1403, 1505
Tru9I	TTAA	5 cut(s)	953, 1146, 1293, 1403, 1505
TscAI	CASTG	3 cut(s)	449, 940, 1453
TseFI	GTSAC	3 cut(s)	754, 829, 941
TseI	GCWGC	5 cut(s)	32, 659, 1208, 1226, 1333
Tsp45I	GTSAC	3 cut(s)	754, 829, 941
TspDTI	ATGAA	8 cut(s)	366, 663, 752, 759, 1028, 1096, 1140, 1281
TspGWI	ACGGA	1 cut(s)	993
TspMI	CCCGGG	1 cut(s)	12
TspRI	CASTG	3 cut(s)	449, 940, 1453
Vha464I	CTTAAG	1 cut(s)	1145
VpaK11BI	GGWCC	2 cut(s)	9, 821
XagI	CCTNNNNNAGG	1 cut(s)	1604
XapI	RAATTY	2 cut(s)	917, 1182
XbaI	TCTAGA	1 cut(s)	1186
XceI	RCATGY	4 cut(s)	422, 505, 974, 1537
XmaI	CCCGGG	1 cut(s)	12
XmiI	GTMKAC	1 cut(s)	975
XmnI	GAANNNNTTC	2 cut(s)	76, 1013
XspI	CTAG	6 cut(s)	92, 905, 1022, 1187, 1454, 1667

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.