Basic Information

Type: gene

Biological Identity

Species

rosa_laevigata

Chromosome

Chr4

Orthogroup ID

OG0008729

Physical Location & Seq

Genomic Coordinates Reverse (-)

69867061 .. 69871984

Gene Structure 4924 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

RLM00000020893

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1671 bp

ATGGGTCGGTCCCGGGCAATTGCGCAATCCGCTGCCGGCGATTCCAGTCAGAGTAGAGGTAAAAGAAAGAGAACAGCTTCAGGTGCAGAACCAGCTGAGAATAGTACAGCTCAGAAAGGTTTAGCTCAGGAGCTTAGCGAACCCAAAGGGGCTTTTTACCATTGTAATTATTGCCAGAAAGATATATCTGGGAAGATACGTATAAAATGTGGCGTGTGTCCAGATTTTGATCTTTGCATTGAGTGCTTCTCTGTTGGAGTTGAGGTTACACCTCACAAATGTAATCATCCATATAGGGTTATGGACAATTTGTCTTTTCCACTAATATGTCCTGATTGGAATGCTGATGAAGAGATGCTATTGCTTGAGGGTATTGAAATGTATGGCTTTGGTAATTGGACTGAAGTTTCTGAACATGTTGGAACAAGAAGAAGGCAACAGTGTATCGACCACTATAATGCTATATATCTGAACTCCCCTTGCTTTCCTCTCCCAGACATGTCTCATGTTATGGGAAAGAGCAGAGAGGATCTTATTGCCTTGGCTAAGGGGTCTGGTGAAATCAAAAAAGAGCTTCCCATGTTTATGGAGATAACTCTGAAAGAAGTATCTCCTTTTTCTGCAGGAGTCAAATGCGAAGAACCAAAGAAGACTGCTGCTTCTAAATCTTCATCCCACTCAACTGCTGATGGTGCATCTGGAGCTGGAAAGAAGGCCTCCAATAAACTTCAGATGAAGGGTGAACCTAAAGTCACTAAAGTGGAAGAATCTCAGCGGAGCATTGGAGAGAAAAAACTTAGGAGTTTAGTGGAGGAGGGACCTTCTGTGACAGAATTGAGTGGCTATAATTACAAGAGGCAAGAGTTTGAAATTGAATACGATAATGATGCTGAGCAGATACTAGCAGATATGGAATTTCTCGATACTGACACTGATCGTGACCGTGATTTAAAACTACGAGTTCTGCATGTCTACGGAAAAAGGCTTGATGAGAGGAAATGTAGGAAGGATTTCGTACTAGAAAGAAATCTGCTTCATCCTGATCCATTGGAGAAGAACCTCTCGCCGGAAGTGAGAGAAATATACCAGCGCTTCAAGGTCTTCATGCGGTTCCACTCAAATGAAGACCACAAGGAGTTGCTTAAGAGTATCATTGAGGAACAACAAATTGTCAAAAGAATTCTAGATCTTCAGGAGGCTCGAGCTGCAGGGTGTAGAACAGCTGCTGAGGCAAGTAAATATCTTGAGCAGAAAAGAAAGAATGAAATTGAAGAAAGTTTGCAAAAGATTAAGGAAAACTCTCAGGCCGGTGCAAGTGGTAAAGTCTTGCAGCAGATCAGTCCTCGGGGAGCCGTTAGGGGATCAGCACTTCTGCATCCTGGCATCAAGGACTTGCCATTAACTACGCAACCTATTCCAAACCCCTTGGATGATTGGGATATCAGTGGACTAGCGGGAGCTAACTTACTTTCTGAAACCGACAAAAGGCTTTGCTGTGAGTTAAGAATCCTACCATCCCATTATCTACACATGCTCCAGTCCATCTCAACAGAGATTTCAAGCGGGAATGTAAAGAAGAAATCCGACGCCCACAGCCTCTTCAAGGTTGAGTCAAGCAAAGTCGATAGAGTTTATGATATGGTAATTCGAAAGGGACTAACCCTAGCATAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003682 GO:0003700 GO:0003712 GO:0003713 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0006325 GO:0006338 GO:0006355 GO:0006357 GO:0006996 GO:0008150 GO:0009889 GO:0009891 GO:0009893 GO:0009987 GO:0010468 GO:0010556 GO:0010557 GO:0010604 GO:0010638 GO:0016043 GO:0019219 GO:0019222 GO:0031056 GO:0031058 GO:0031323 GO:0031325 GO:0031326 GO:0031328 GO:0031399 GO:0031401 GO:0032268 GO:0032270 GO:0033043 GO:0033044 GO:0035065 GO:0035066 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044424 GO:0044464 GO:0045935 GO:0048518 GO:0048522 GO:0050789 GO:0050794 GO:0051128 GO:0051130 GO:0051171 GO:0051173 GO:0051246 GO:0051247 GO:0051252 GO:0051254 GO:0051276 GO:0060255 GO:0065007 GO:0071840 GO:0080090 GO:0140110 GO:1901983 GO:1901985 GO:1902275 GO:1902680 GO:1903506 GO:1903508 GO:1905269 GO:2000112 GO:2000756 GO:2000758 GO:2001141 GO:2001252

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Myb_DNA-binding ZZ

Protein Analysis

557

Amino Acids

62.41

Weight (kDa)

7.21

Isoelectric Point (pI)

49.41

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
ZZ	PF00569	53 - 85	1e-07	Zinc finger, ZZ type
ZZ_ADA2	PF25299	55 - 101	3.1e-13	ADA2 ZZ-type zing finger
Myb_DNA-binding	PF00249	112 - 153	1.6e-11	Myb-like DNA-binding domain
Myb_DNA-bind_6	PF13921	113 - 156	2.8e-06	Myb-like DNA-binding domain
TADA2A-like_3rd	PF22941	279 - 349	2e-25	Transcriptional adapter 2-alpha-like domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

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Publication-ready

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Orthologous Genes (Group: OG0008729)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G07740 AT3G07740 AT3G07740 AT3G07740
fragaria_vesca	FvH4_6g40730 FvH4_6g40730 FvH4_6g40730
malus_domestica	MD17G1115800.v1.1
prunus_persica	Prupe.3G198800_v2.0.a1 Prupe.3G198800_v2.0.a1 Prupe.3G198800_v2.0.a1
pyrus_communis	pycom17g10700
rosa_chinensis	RchiOBHm_Chr2g0156181
rosa_laevigata	RLG00000020893
rosa_multiflora	Rmu_sc0000260.1_g000013
rosa_roxburghii	Rroxscaffold_2G00093170
rosa_rugosa	Rorug02G0452100 Rorug02G0452100
rosa_samantha	Rh2AG518800 Rh2BG530200 Rh2CG503800 Rh2DG539200
rosa_wichuraiana	Rw2G042730

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
Acc16I	TGCGCA	1 cut(s)	24
AccI	GTMKAC	1 cut(s)	972
AciI	CCGC	5 cut(s)	30, 775, 1108, 1454, 1563
AclWI	GGATC	3 cut(s)	537, 1037, 1369
AcsI	RAATTY	2 cut(s)	914, 1179
AcuI	CTGAAG	4 cut(s)	63, 423, 713, 1175
AcyI	GRCGYC	1 cut(s)	1587
AfaI	GTAC	2 cut(s)	106, 1017
AfeI	AGCGCT	1 cut(s)	1091
AfiI	CCNNNNNNNGG	3 cut(s)	1066, 1485, 1603
AflII	CTTAAG	1 cut(s)	1142
AflIII	ACRYGT	2 cut(s)	415, 498
AgsI	TTSAA	7 cut(s)	377, 869, 875, 1096, 1271, 1560, 1603
AhdI	GACNNNNNGTC	1 cut(s)	310
AjnI	CCWGG	1 cut(s)	1378
AleI	CACNNNNGTG	1 cut(s)	758
Alw26I	GTCTC	1 cut(s)	507
AlwI	GGATC	3 cut(s)	537, 1037, 1369
AlwNI	CAGNNNCTG	1 cut(s)	1226
Ama87I	CYCGRG	3 cut(s)	12, 1200, 1344
Aor51HI	AGCGCT	1 cut(s)	1091
AoxI	GGCC	2 cut(s)	714, 1305
ApeKI	GCWGC	5 cut(s)	32, 656, 1205, 1223, 1330
ApoI	RAATTY	2 cut(s)	914, 1179
Asp700I	GAANNNNTTC	2 cut(s)	76, 1010
AspLEI	GCGC	2 cut(s)	25, 1092
AspS9I	GGNCC	2 cut(s)	9, 818
AsuC2I	CCSGG	2 cut(s)	13, 14
AsuHPI	GGTGA	2 cut(s)	569, 752
AsuII	TTCGAA	1 cut(s)	1648
AvaI	CYCGRG	3 cut(s)	12, 1200, 1344
AvaII	GGWCC	2 cut(s)	9, 818
BbsI	GAAGAC	3 cut(s)	656, 1093, 1131
BbvCI	CCTCAGC	1 cut(s)	1227
BbvI	GCAGC	5 cut(s)	19, 643, 1192, 1210, 1342
BccI	CCATC	3 cut(s)	683, 1522, 1550
BceAI	ACGGC	1 cut(s)	1337
BcgI	CGANNNNNNTGC	2 cut(s)	869, 903
BciT130I	CCWGG	1 cut(s)	1380
BcnI	CCSGG	2 cut(s)	13, 14
BcoDI	GTCTC	1 cut(s)	507
BfaI	CTAG	5 cut(s)	902, 1019, 1184, 1451, 1664
BfmI	CTRYAG	2 cut(s)	621, 1206
BfoI	RGCGCY	1 cut(s)	1093
BfrI	CTTAAG	1 cut(s)	1142
BglII	AGATCT	1 cut(s)	1186
BisI	GCNGC	5 cut(s)	33, 657, 1206, 1224, 1331
BlpI	GCTNAGC	2 cut(s)	134, 891
BlsI	GCNGC	5 cut(s)	34, 658, 1207, 1225, 1332
Bme1390I	CCNGG	3 cut(s)	13, 14, 1380
Bme18I	GGWCC	2 cut(s)	9, 818
BmeRI	GACNNNNNGTC	1 cut(s)	310
BmeT110I	CYCGRG	3 cut(s)	12, 1200, 1344
BmgT120I	GGNCC	2 cut(s)	9, 818
BmiI	GGNNCC	4 cut(s)	11, 819, 1112, 1351
BmrFI	CCNGG	3 cut(s)	13, 14, 1380
BmsI	GCATC	5 cut(s)	345, 704, 877, 1384, 1392
BpiI	GAAGAC	3 cut(s)	656, 1093, 1131
BplI	GAGNNNNNCTC	2 cut(s)	233, 265
BpmI	CTGGAG	2 cut(s)	720, 1520
Bpu10I	CCTNAGC	3 cut(s)	126, 546, 1227
Bpu1102I	GCTNAGC	2 cut(s)	134, 891
Bpu14I	TTCGAA	1 cut(s)	1648
BpuEI	CTTGAG	2 cut(s)	386, 1265
BpuMI	CCSGG	2 cut(s)	13, 14
BsaAI	YACGTR	1 cut(s)	200
BsaBI	GATNNNNATC	1 cut(s)	228
BsaHI	GRCGYC	1 cut(s)	1587
BsaJI	CCNNGG	4 cut(s)	12, 540, 1343, 1425
BsaXI	ACNNNNNCTCC	4 cut(s)	249, 279, 1518, 1548
Bsc4I	CCNNNNNNNGG	3 cut(s)	1066, 1485, 1603
Bse118I	RCCGGY	2 cut(s)	35, 1307
Bse1I	ACTGG	2 cut(s)	45, 1537
Bse8I	GATNNNNATC	1 cut(s)	228
BseBI	CCWGG	1 cut(s)	1380
BseDI	CCNNGG	4 cut(s)	12, 540, 1343, 1425
BseGI	GGATG	6 cut(s)	286, 671, 1036, 1375, 1435, 1514
BseJI	GATNNNNATC	1 cut(s)	228
BseLI	CCNNNNNNNGG	3 cut(s)	1066, 1485, 1603
BseMII	CTCAG	7 cut(s)	87, 125, 140, 785, 882, 1218, 1316
BseNI	ACTGG	2 cut(s)	45, 1537
BseRI	GAGGAG	1 cut(s)	827
BseXI	GCAGC	5 cut(s)	19, 643, 1192, 1210, 1342
BsgI	GTGCAG	1 cut(s)	105
BshFI	GGCC	2 cut(s)	716, 1307
BsiHKCI	CYCGRG	3 cut(s)	12, 1200, 1344
BsiSI	CCGG	4 cut(s)	13, 36, 1067, 1308
BslFI	GGGAC	1 cut(s)	831
BslI	CCNNNNNNNGG	3 cut(s)	1066, 1485, 1603
BsmAI	GTCTC	1 cut(s)	507
BsmFI	GGGAC	1 cut(s)	831
BsmI	GAATGC	1 cut(s)	346
BsnI	GGCC	2 cut(s)	716, 1307
BsoBI	CYCGRG	3 cut(s)	12, 1200, 1344
Bsp119I	TTCGAA	1 cut(s)	1648
Bsp143I	GATC	7 cut(s)	229, 529, 934, 1042, 1186, 1335, 1361
Bsp1720I	GCTNAGC	2 cut(s)	134, 891
BspACI	CCGC	5 cut(s)	30, 775, 1108, 1454, 1563
BspANI	GGCC	2 cut(s)	716, 1307
BspCNI	CTCAG	7 cut(s)	88, 124, 139, 784, 883, 1219, 1315
BspLI	GGNNCC	4 cut(s)	11, 819, 1112, 1351
BspMAI	CTGCAG	2 cut(s)	625, 1210
BspPI	GGATC	3 cut(s)	537, 1037, 1369
BspT104I	TTCGAA	1 cut(s)	1648
BspTI	CTTAAG	1 cut(s)	1142
BsrFI	RCCGGY	2 cut(s)	35, 1307
BsrI	ACTGG	2 cut(s)	45, 1537
BssAI	RCCGGY	2 cut(s)	35, 1307
BssECI	CCNNGG	4 cut(s)	12, 540, 1343, 1425
BssMI	GATC	7 cut(s)	229, 529, 934, 1042, 1186, 1335, 1361
BssNI	GRCGYC	1 cut(s)	1587
BssT1I	CCWWGG	2 cut(s)	540, 1425
Bst2UI	CCWGG	1 cut(s)	1380
Bst4CI	ACNGT	2 cut(s)	441, 944
Bst6I	CTCTTC	2 cut(s)	345, 1604
BstACI	GRCGYC	1 cut(s)	1587
BstAFI	CTTAAG	1 cut(s)	1142
BstAPI	GCANNNNNTGC	1 cut(s)	243
BstBAI	YACGTR	1 cut(s)	200
BstBI	TTCGAA	1 cut(s)	1648
BstC8I	GCNNGC	1 cut(s)	37
BstENI	CCTNNNNNAGG	1 cut(s)	1601
BstF5I	GGATG	6 cut(s)	286, 671, 1036, 1375, 1435, 1514
BstH2I	RGCGCY	1 cut(s)	1093
BstHHI	GCGC	2 cut(s)	25, 1092
BstKTI	GATC	7 cut(s)	232, 532, 937, 1045, 1189, 1338, 1364
BstMAI	GTCTC	1 cut(s)	507
BstMBI	GATC	7 cut(s)	229, 529, 934, 1042, 1186, 1335, 1361
BstMWI	GCNNNNNNNGC	8 cut(s)	29, 83, 92, 243, 692, 701, 1205, 1229
BstNI	CCWGG	1 cut(s)	1380
BstNSI	RCATGY	4 cut(s)	419, 502, 971, 1534
BstSCI	CCNGG	3 cut(s)	11, 12, 1378
BstSFI	CTRYAG	2 cut(s)	621, 1206
BstSNI	TACGTA	1 cut(s)	200
BstV1I	GCAGC	5 cut(s)	19, 643, 1192, 1210, 1342
BstV2I	GAAGAC	3 cut(s)	656, 1093, 1131
BstX2I	RGATCY	2 cut(s)	529, 1186
BstXI	CCANNNNNNTGG	1 cut(s)	586
BstYI	RGATCY	2 cut(s)	529, 1186
BsuRI	GGCC	2 cut(s)	716, 1307
BtsCI	GGATG	6 cut(s)	286, 671, 1036, 1375, 1435, 1514
BtsIMutI	CAGTG	3 cut(s)	446, 930, 1450
Cac8I	GCNNGC	1 cut(s)	37
CaiI	CAGNNNCTG	1 cut(s)	1226
CfoI	GCGC	2 cut(s)	25, 1092
Cfr10I	RCCGGY	2 cut(s)	35, 1307
Cfr13I	GGNCC	2 cut(s)	9, 818
Cfr9I	CCCGGG	1 cut(s)	12
CseI	GACGC	1 cut(s)	1595
Csp6I	GTAC	2 cut(s)	105, 1016
CviAII	CATG	7 cut(s)	416, 499, 506, 580, 968, 1105, 1531
CviQI	GTAC	2 cut(s)	105, 1016
DpnI	GATC	7 cut(s)	231, 531, 936, 1044, 1188, 1337, 1363
DpnII	GATC	7 cut(s)	229, 529, 934, 1042, 1186, 1335, 1361
DraI	TTTAAA	1 cut(s)	951
DriI	GACNNNNNGTC	1 cut(s)	310
Eam1104I	CTCTTC	2 cut(s)	345, 1604
Eam1105I	GACNNNNNGTC	1 cut(s)	310
EarI	CTCTTC	2 cut(s)	345, 1604
Eco105I	TACGTA	1 cut(s)	200
Eco130I	CCWWGG	2 cut(s)	540, 1425
Eco147I	AGGCCT	1 cut(s)	716
Eco32I	GATATC	1 cut(s)	1441
Eco47I	GGWCC	2 cut(s)	9, 818
Eco47III	AGCGCT	1 cut(s)	1091
Eco57I	CTGAAG	4 cut(s)	63, 423, 713, 1175
Eco88I	CYCGRG	3 cut(s)	12, 1200, 1344
EcoNI	CCTNNNNNAGG	1 cut(s)	1601
EcoO109I	RGGNCCY	1 cut(s)	818
EcoRI	GAATTC	1 cut(s)	1179
EcoRII	CCWGG	1 cut(s)	1378
EcoRV	GATATC	1 cut(s)	1441
EcoT14I	CCWWGG	2 cut(s)	540, 1425
ErhI	CCWWGG	2 cut(s)	540, 1425
FaeI	CATG	7 cut(s)	419, 502, 509, 583, 971, 1108, 1534
FaqI	GGGAC	1 cut(s)	831
FatI	CATG	7 cut(s)	415, 498, 505, 579, 967, 1104, 1530
FauI	CCCGC	2 cut(s)	1447, 1556
FblI	GTMKAC	1 cut(s)	972
Fnu4HI	GCNGC	5 cut(s)	33, 657, 1206, 1224, 1331
FokI	GGATG	6 cut(s)	273, 658, 1023, 1362, 1442, 1501
Fsp4HI	GCNGC	5 cut(s)	33, 657, 1206, 1224, 1331
FspBI	CTAG	5 cut(s)	902, 1019, 1184, 1451, 1664
FspI	TGCGCA	1 cut(s)	24
GlaI	GCGC	2 cut(s)	24, 1091
GluI	GCNGC	5 cut(s)	33, 657, 1206, 1224, 1331
GsuI	CTGGAG	2 cut(s)	720, 1520
HaeII	RGCGCY	1 cut(s)	1093
HaeIII	GGCC	2 cut(s)	716, 1307
HapII	CCGG	4 cut(s)	13, 36, 1067, 1308
HgaI	GACGC	1 cut(s)	1595
HhaI	GCGC	2 cut(s)	25, 1092
Hin1I	GRCGYC	1 cut(s)	1587
Hin1II	CATG	7 cut(s)	419, 502, 509, 583, 971, 1108, 1534
Hin6I	GCGC	2 cut(s)	23, 1090
HinP1I	GCGC	2 cut(s)	23, 1090
HinfI	GANTC	5 cut(s)	41, 627, 767, 1506, 1610
HpaII	CCGG	4 cut(s)	13, 36, 1067, 1308
HphI	GGTGA	2 cut(s)	569, 752
Hpy166II	GTNNAC	3 cut(s)	743, 973, 1448
Hpy188I	TCNGA	8 cut(s)	51, 114, 412, 471, 600, 732, 1474, 1585
Hpy8I	GTNNAC	3 cut(s)	743, 973, 1448
Hpy99I	CGWCG	1 cut(s)	1589
HpyAV	CCTTC	5 cut(s)	426, 706, 730, 831, 1000
HpyCH4III	ACNGT	2 cut(s)	441, 944
HpyCH4IV	ACGT	1 cut(s)	199
HpyF10VI	GCNNNNNNNGC	8 cut(s)	29, 83, 92, 243, 692, 701, 1205, 1229
HpySE526I	ACGT	1 cut(s)	199
Hsp92I	GRCGYC	1 cut(s)	1587
Hsp92II	CATG	7 cut(s)	419, 502, 509, 583, 971, 1108, 1534
HspAI	GCGC	2 cut(s)	23, 1090
KroI	GCCGGC	1 cut(s)	35
KroNI	GCCGGC	1 cut(s)	37
Kzo9I	GATC	7 cut(s)	229, 529, 934, 1042, 1186, 1335, 1361
LmnI	GCTCC	6 cut(s)	130, 701, 777, 1349, 1457, 1539
Lsp1109I	GCAGC	5 cut(s)	19, 643, 1192, 1210, 1342
LweI	GCATC	5 cut(s)	345, 704, 877, 1384, 1392
MaeI	CTAG	5 cut(s)	902, 1019, 1184, 1451, 1664
MaeII	ACGT	1 cut(s)	199
MaeIII	GTNAC	4 cut(s)	265, 751, 826, 938
MalI	GATC	7 cut(s)	231, 531, 936, 1044, 1188, 1337, 1363
MboI	GATC	7 cut(s)	229, 529, 934, 1042, 1186, 1335, 1361
MfeI	CAATTG	1 cut(s)	18
MflI	RGATCY	2 cut(s)	529, 1186
MlyI	GAGTC	2 cut(s)	636, 1619
MmeI	TCCRAC	3 cut(s)	235, 400, 1608
MroNI	GCCGGC	1 cut(s)	35
MroXI	GAANNNNTTC	2 cut(s)	76, 1010
MseI	TTAA	5 cut(s)	950, 1143, 1290, 1400, 1502
MslI	CAYNNNNRTG	5 cut(s)	325, 456, 584, 758, 1119
MspA1I	CMGCKG	4 cut(s)	32, 95, 775, 1223
MspCI	CTTAAG	1 cut(s)	1142
MspI	CCGG	4 cut(s)	13, 36, 1067, 1308
MspR9I	CCNGG	3 cut(s)	13, 14, 1380
MunI	CAATTG	1 cut(s)	18
Mva1269I	GAATGC	1 cut(s)	346
MvaI	CCWGG	1 cut(s)	1380
MwoI	GCNNNNNNNGC	8 cut(s)	29, 83, 92, 243, 692, 701, 1205, 1229
NaeI	GCCGGC	1 cut(s)	37
NciI	CCSGG	2 cut(s)	13, 14
NdeII	GATC	7 cut(s)	229, 529, 934, 1042, 1186, 1335, 1361
NgoMIV	GCCGGC	1 cut(s)	35
NlaIII	CATG	7 cut(s)	419, 502, 509, 583, 971, 1108, 1534
NlaIV	GGNNCC	4 cut(s)	11, 819, 1112, 1351
NmuCI	GTSAC	3 cut(s)	751, 826, 938
NsbI	TGCGCA	1 cut(s)	24
NspI	RCATGY	4 cut(s)	419, 502, 971, 1534
NspV	TTCGAA	1 cut(s)	1648
OliI	CACNNNNGTG	1 cut(s)	758
PaeR7I	CTCGAG	1 cut(s)	1200
PceI	AGGCCT	1 cut(s)	716
PciI	ACATGT	2 cut(s)	415, 498
PctI	GAATGC	1 cut(s)	346
PdiI	GCCGGC	1 cut(s)	37
PdmI	GAANNNNTTC	2 cut(s)	76, 1010
PfeI	GAWTC	3 cut(s)	41, 767, 1506
PkrI	GCNGC	5 cut(s)	34, 658, 1207, 1225, 1332
PleI	GAGTC	2 cut(s)	635, 1618
PpsI	GAGTC	2 cut(s)	635, 1618
Ppu21I	YACGTR	1 cut(s)	200
PpuMI	RGGWCCY	1 cut(s)	818
PscI	ACATGT	2 cut(s)	415, 498
Psp5II	RGGWCCY	1 cut(s)	818
Psp6I	CCWGG	1 cut(s)	1378
PspGI	CCWGG	1 cut(s)	1378
PspN4I	GGNNCC	4 cut(s)	11, 819, 1112, 1351
PspPI	GGNCC	2 cut(s)	9, 818
PspPPI	RGGWCCY	1 cut(s)	818
PspXI	VCTCGAGB	1 cut(s)	1200
PstI	CTGCAG	2 cut(s)	625, 1210
PstNI	CAGNNNCTG	1 cut(s)	1226
PsuI	RGATCY	2 cut(s)	529, 1186
PvuII	CAGCTG	2 cut(s)	95, 1223
RsaI	GTAC	2 cut(s)	106, 1017
RsaNI	GTAC	2 cut(s)	105, 1016
RseI	CAYNNNNRTG	5 cut(s)	325, 456, 584, 758, 1119
SaqAI	TTAA	5 cut(s)	950, 1143, 1290, 1400, 1502
SatI	GCNGC	5 cut(s)	33, 657, 1206, 1224, 1331
Sau3AI	GATC	7 cut(s)	229, 529, 934, 1042, 1186, 1335, 1361
Sau96I	GGNCC	2 cut(s)	9, 818
SchI	GAGTC	2 cut(s)	636, 1619
ScrFI	CCNGG	3 cut(s)	13, 14, 1380
SfaNI	GCATC	5 cut(s)	345, 704, 877, 1384, 1392
SfcI	CTRYAG	2 cut(s)	621, 1206
Sfr274I	CTCGAG	1 cut(s)	1200
SfuI	TTCGAA	1 cut(s)	1648
SinI	GGWCC	2 cut(s)	9, 818
SlaI	CTCGAG	1 cut(s)	1200
SmaI	CCCGGG	1 cut(s)	14
SmiMI	CAYNNNNRTG	5 cut(s)	325, 456, 584, 758, 1119
SmlI	CTYRAG	4 cut(s)	365, 1142, 1200, 1244
SmoI	CTYRAG	4 cut(s)	365, 1142, 1200, 1244
SnaBI	TACGTA	1 cut(s)	200
SseBI	AGGCCT	1 cut(s)	716
SsiI	CCGC	5 cut(s)	30, 775, 1108, 1454, 1563
SspMI	CTAG	5 cut(s)	902, 1019, 1184, 1451, 1664
StuI	AGGCCT	1 cut(s)	716
StyD4I	CCNGG	3 cut(s)	11, 12, 1378
StyI	CCWWGG	2 cut(s)	540, 1425
TaaI	ACNGT	2 cut(s)	441, 944
TaiI	ACGT	1 cut(s)	202
TaqI	TCGA	5 cut(s)	447, 921, 1201, 1623, 1648
TatI	WGTACW	1 cut(s)	104
TfiI	GAWTC	3 cut(s)	41, 767, 1506
Tru1I	TTAA	5 cut(s)	950, 1143, 1290, 1400, 1502
Tru9I	TTAA	5 cut(s)	950, 1143, 1290, 1400, 1502
TscAI	CASTG	3 cut(s)	446, 937, 1450
TseFI	GTSAC	3 cut(s)	751, 826, 938
TseI	GCWGC	5 cut(s)	32, 656, 1205, 1223, 1330
Tsp45I	GTSAC	3 cut(s)	751, 826, 938
TspDTI	ATGAA	7 cut(s)	363, 660, 749, 1025, 1093, 1137, 1278
TspGWI	ACGGA	1 cut(s)	990
TspMI	CCCGGG	1 cut(s)	12
TspRI	CASTG	3 cut(s)	446, 937, 1450
Vha464I	CTTAAG	1 cut(s)	1142
VpaK11BI	GGWCC	2 cut(s)	9, 818
XagI	CCTNNNNNAGG	1 cut(s)	1601
XapI	RAATTY	2 cut(s)	914, 1179
XbaI	TCTAGA	1 cut(s)	1183
XceI	RCATGY	4 cut(s)	419, 502, 971, 1534
XhoI	CTCGAG	1 cut(s)	1200
XmaI	CCCGGG	1 cut(s)	12
XmiI	GTMKAC	1 cut(s)	972
XmnI	GAANNNNTTC	2 cut(s)	76, 1010
XspI	CTAG	5 cut(s)	902, 1019, 1184, 1451, 1664

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.