AT3G17390

Catalyzes the formation of S-adenosylmethionine from methionine and ATP

Basic Information

Type: gene
Biological Identity
arabidopsis_thaliana
3
Physical Location & Seq
Reverse (-)
5952187 .. 5954091
1905 bp
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UTR
Exon/CDS
Intron
AT3G17390.1

Sequence Viewer

Length: 1182 bp
ATGGAATCTTTTTTGTTCACATCTGAATCCGTCAACGAGGGACATCCCGACAAGCTTTGTGATCAGATCTCCGACGCTATCCTCGATGCTTGCCTTGAACAAGACCCTGAGAGCAAAGTTGCTTGTGAGACTTGTACCAAGACTAACATGGTCATGGTTTTTGGAGAAATCACCACCAAGGCTAACGTTGATTACGAGCAGATTGTTCGTAAAACATGCCGTGAGATTGGATTCGTCTCTGCTGACGTTGGTCTAGATGCTGACAATTGCAAGGTTCTGGTTAACATTGAGCAACAGAGTCCTGACATTGCACAAGGTGTTCATGGTCATCTCACCAAGAAGCCAGAGGAGGTTGGAGCTGGTGACCAAGGTCACATGTTTGGGTATGCTACTGATGAGACTCCTGAGCTCATGCCTCTTACTCACGTTCTCGCTACTAAGCTTGGAGCTAAACTCACTGAAGTTCGCAAGAATGGAACTTGCCCTTGGTTGAGGCCAGATGGTAAGACTCAAGTCACTATTGAGTACATCAACGAAAGCGGAGCCATGGTTCCTGTACGTGTCCACACTGTTCTCATCTCAACACAGCATGACGAGACTGTGACTAACGATGAGATCGCAGCTGATCTTAAGGAGCATGTGATCAAGCCAGTGATCCCAGAGAAATACCTTGATGAGAAAACCATCTTCCATCTCAACCCATCTGGTCGTTTTGTTATCGGAGGTCCTCATGGAGATGCAGGGCTTACCGGCCGTAAGATCATCATCGATACTTATGGTGGTTGGGGTGCACACGGAGGTGGTGCTTTCTCTGGAAAGGACCCAACCAAGGTTGACAGGAGTGGGGCTTACATCGTTAGGCAAGCAGCTAAGAGCATTGTAGCCAGTGGGCTAGCGAGGCGGGTCATTGTGCAAGTCTCGTATGCCATTGGTGTCCCTGAGCCATTGTCTGTGTTCGTGGACAGTTATGGAACAGGAAAGATACCAGACAAGGAGATTCTTGAGATTGTGAAGGAGAGTTTTGATTTCAGGCCAGGTATGATCTCCATTAACTTGGATCTGAAGAGAGGAGGTAATGGTAGGTTCTTGAAGACTGCTGCCTATGGTCACTTTGGAAGGGACGATGCTGATTTCACCTGGGAGGTAGTCAAGCCACTCAAGTCTAACAAGGTCCAAGCTTGA

Protein Analysis

393

Amino Acids

42.8

Weight (kDa)

5.51

Isoelectric Point (pI)

27.3

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
S-AdoMet_synt_N PF00438 4 - 101 3.7e-44 S-adenosylmethionine synthetase, N-terminal domain
S-AdoMet_synt_M PF02772 117 - 238 7.4e-48 S-adenosylmethionine synthetase, central domain
S-AdoMet_synt_C PF02773 240 - 381 6.1e-60 S-adenosylmethionine synthetase, C-terminal domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AciI CCGC 2 cut(s) 540, 901
AclI AACGTT 1 cut(s) 186
AclWI GGATC 2 cut(s) 649, 1065
AcoI YGGCCR 1 cut(s) 751
AcuI CTGAAG 2 cut(s) 480, 1082
AdeI CACNNNGTG 1 cut(s) 317
AfaI GTAC 3 cut(s) 136, 527, 558
AfiI CCNNNNNNNGG 1 cut(s) 829
AflII CTTAAG 1 cut(s) 629
AflIII ACRYGT 2 cut(s) 375, 559
AgsI TTSAA 2 cut(s) 98, 1090
AjnI CCWGG 2 cut(s) 1033, 1136
AjuI GAANNNNNNNTTGG 2 cut(s) 469, 501
AleI CACNNNNGTG 1 cut(s) 798
AloI GAACNNNNNNTCC 2 cut(s) 534, 566
AluBI AGCT 8 cut(s) 55, 359, 409, 442, 449, 623, 869, 1178
AluI AGCT 8 cut(s) 55, 359, 409, 442, 449, 623, 869, 1178
Alw21I GWGCWC 2 cut(s) 411, 793
Alw26I GTCTC 5 cut(s) 122, 241, 392, 590, 922
Alw44I GTGCAC 1 cut(s) 789
AlwI GGATC 2 cut(s) 649, 1065
AoxI GGCC 3 cut(s) 494, 751, 1031
ApaLI GTGCAC 1 cut(s) 789
ApeKI GCWGC 3 cut(s) 620, 866, 1097
AspS9I GGNCC 3 cut(s) 725, 820, 1171
AsuHPI GGTGA 4 cut(s) 163, 325, 374, 1126
AsuNHI GCTAGC 1 cut(s) 892
AvaII GGWCC 3 cut(s) 725, 820, 1171
BaeGI GKGCMC 1 cut(s) 793
BanII GRGCYC 1 cut(s) 411
BbsI GAAGAC 1 cut(s) 1097
Bbv12I GWGCWC 2 cut(s) 411, 793
BbvI GCAGC 3 cut(s) 632, 878, 1084
BccI CCATC 4 cut(s) 494, 692, 699, 709
BceAI ACGGC 2 cut(s) 204, 738
BcgI CGANNNNNNTGC 2 cut(s) 188, 222
BciT130I CCWGG 2 cut(s) 1035, 1138
BclI TGATCA 2 cut(s) 61, 642
BcoDI GTCTC 5 cut(s) 122, 241, 392, 590, 922
BfaI CTAG 2 cut(s) 254, 893
BfrI CTTAAG 1 cut(s) 629
BglII AGATCT 1 cut(s) 66
BisI GCNGC 3 cut(s) 621, 867, 1098
BlsI GCNGC 3 cut(s) 622, 868, 1099
Bme1390I CCNGG 2 cut(s) 1035, 1138
Bme18I GGWCC 3 cut(s) 725, 820, 1171
BmgT120I GGNCC 3 cut(s) 725, 820, 1171
BmiI GGNNCC 3 cut(s) 544, 552, 822
BmrFI CCNGG 2 cut(s) 1035, 1138
BmsI GCATC 4 cut(s) 76, 247, 727, 1114
BmtI GCTAGC 1 cut(s) 896
BoxI GACNNNNGTC 3 cut(s) 249, 369, 512
BpiI GAAGAC 1 cut(s) 1097
BplI GAGNNNNNCTC 2 cut(s) 438, 470
Bpu10I CCTNAGC 2 cut(s) 405, 939
BpuEI CTTGAG 3 cut(s) 495, 1022, 1142
Bsa29I ATCGAT 1 cut(s) 768
BsaAI YACGTR 1 cut(s) 560
BsaBI GATNNNNATC 1 cut(s) 764
BsaJI CCNNGG 6 cut(s) 177, 367, 485, 546, 828, 1137
BsaXI ACNNNNNCTCC 2 cut(s) 534, 564
Bsc4I CCNNNNNNNGG 1 cut(s) 829
Bse118I RCCGGY 1 cut(s) 749
Bse1I ACTGG 2 cut(s) 650, 885
Bse3DI GCAATG 1 cut(s) 306
Bse8I GATNNNNATC 1 cut(s) 764
BseBI CCWGG 2 cut(s) 1035, 1138
BseCI ATCGAT 1 cut(s) 768
BseDI CCNNGG 6 cut(s) 177, 367, 485, 546, 828, 1137
BseGI GGATG 1 cut(s) 43
BseJI GATNNNNATC 1 cut(s) 764
BseLI CCNNNNNNNGG 1 cut(s) 829
BseMI GCAATG 1 cut(s) 306
BseMII CTCAG 3 cut(s) 99, 396, 930
BseNI ACTGG 2 cut(s) 650, 885
BseRI GAGGAG 2 cut(s) 362, 1083
BseSI GKGCMC 1 cut(s) 793
BseX3I CGGCCG 1 cut(s) 751
BseXI GCAGC 3 cut(s) 632, 878, 1084
Bsh1285I CGRYCG 1 cut(s) 754
BshFI GGCC 3 cut(s) 496, 753, 1033
BshVI ATCGAT 1 cut(s) 768
BsiEI CGRYCG 1 cut(s) 754
BsiHKAI GWGCWC 2 cut(s) 411, 793
BsiSI CCGG 1 cut(s) 750
BslFI GGGAC 3 cut(s) 54, 920, 1133
BslI CCNNNNNNNGG 1 cut(s) 829
BsmAI GTCTC 5 cut(s) 122, 241, 392, 590, 922
BsmBI CGTCTC 1 cut(s) 241
BsmFI GGGAC 3 cut(s) 54, 920, 1133
BsnI GGCC 3 cut(s) 496, 753, 1033
Bsp1286I GDGCHC 2 cut(s) 411, 793
Bsp143I GATC 9 cut(s) 61, 66, 615, 625, 642, 654, 759, 1041, 1057
Bsp19I CCATGG 1 cut(s) 546
BspACI CCGC 2 cut(s) 540, 901
BspANI GGCC 3 cut(s) 496, 753, 1033
BspCNI CTCAG 3 cut(s) 100, 397, 931
BspDI ATCGAT 1 cut(s) 768
BspLI GGNNCC 3 cut(s) 544, 552, 822
BspOI GCTAGC 1 cut(s) 896
BspPI GGATC 2 cut(s) 649, 1065
BspTI CTTAAG 1 cut(s) 629
BsrDI GCAATG 1 cut(s) 306
BsrFI RCCGGY 1 cut(s) 749
BsrI ACTGG 2 cut(s) 650, 885
BssAI RCCGGY 1 cut(s) 749
BssECI CCNNGG 6 cut(s) 177, 367, 485, 546, 828, 1137
BssMI GATC 9 cut(s) 61, 66, 615, 625, 642, 654, 759, 1041, 1057
BssT1I CCWWGG 5 cut(s) 177, 367, 485, 546, 828
Bst2UI CCWGG 2 cut(s) 1035, 1138
Bst4CI ACNGT 3 cut(s) 571, 601, 965
Bst6I CTCTTC 1 cut(s) 1058
BstAFI CTTAAG 1 cut(s) 629
BstBAI YACGTR 1 cut(s) 560
BstC8I GCNNGC 3 cut(s) 91, 864, 894
BstDEI CTNAG 5 cut(s) 108, 405, 438, 870, 939
BstDSI CCRYGG 1 cut(s) 546
BstEII GGTNACC 1 cut(s) 362
BstF5I GGATG 1 cut(s) 43
BstKTI GATC 9 cut(s) 64, 69, 618, 628, 645, 657, 762, 1044, 1060
BstMAI GTCTC 5 cut(s) 122, 241, 392, 590, 922
BstMBI GATC 9 cut(s) 61, 66, 615, 625, 642, 654, 759, 1041, 1057
BstMCI CGRYCG 1 cut(s) 754
BstMWI GCNNNNNNNGC 1 cut(s) 898
BstNI CCWGG 2 cut(s) 1035, 1138
BstNSI RCATGY 3 cut(s) 219, 379, 641
BstPAI GACNNNNGTC 3 cut(s) 249, 369, 512
BstPI GGTNACC 1 cut(s) 362
BstSCI CCNGG 2 cut(s) 1033, 1136
BstSLI GKGCMC 1 cut(s) 793
BstV1I GCAGC 3 cut(s) 632, 878, 1084
BstV2I GAAGAC 1 cut(s) 1097
BstX2I RGATCY 2 cut(s) 66, 1057
BstXI CCANNNNNNTGG 1 cut(s) 1054
BstYI RGATCY 2 cut(s) 66, 1057
BstZI CGGCCG 1 cut(s) 751
Bsu15I ATCGAT 1 cut(s) 768
BsuRI GGCC 3 cut(s) 496, 753, 1033
BsuTUI ATCGAT 1 cut(s) 768
BtgI CCRYGG 1 cut(s) 546
BtsCI GGATG 1 cut(s) 43
BtsIMutI CAGTG 4 cut(s) 456, 567, 657, 892
Cac8I GCNNGC 3 cut(s) 91, 864, 894
Cfr10I RCCGGY 1 cut(s) 749
Cfr13I GGNCC 3 cut(s) 725, 820, 1171
ClaI ATCGAT 1 cut(s) 768
CseI GACGC 1 cut(s) 83
Csp6I GTAC 3 cut(s) 135, 526, 557
CviQI GTAC 3 cut(s) 135, 526, 557
DdeI CTNAG 5 cut(s) 108, 405, 438, 870, 939
DpnI GATC 9 cut(s) 63, 68, 617, 627, 644, 656, 761, 1043, 1059
DpnII GATC 9 cut(s) 61, 66, 615, 625, 642, 654, 759, 1041, 1057
DraIII CACNNNGTG 1 cut(s) 317
EaeI YGGCCR 1 cut(s) 751
EagI CGGCCG 1 cut(s) 751
Eam1104I CTCTTC 1 cut(s) 1058
EarI CTCTTC 1 cut(s) 1058
Ecl136II GAGCTC 1 cut(s) 409
EclXI CGGCCG 1 cut(s) 751
Eco130I CCWWGG 5 cut(s) 177, 367, 485, 546, 828
Eco24I GRGCYC 1 cut(s) 411
Eco47I GGWCC 3 cut(s) 725, 820, 1171
Eco52I CGGCCG 1 cut(s) 751
Eco53kI GAGCTC 1 cut(s) 409
Eco57I CTGAAG 2 cut(s) 480, 1082
Eco91I GGTNACC 1 cut(s) 362
EcoICRI GAGCTC 1 cut(s) 409
EcoO109I RGGNCCY 2 cut(s) 725, 820
EcoO65I GGTNACC 1 cut(s) 362
EcoRII CCWGG 2 cut(s) 1033, 1136
EcoT14I CCWWGG 5 cut(s) 177, 367, 485, 546, 828
EcoT38I GRGCYC 1 cut(s) 411
ErhI CCWWGG 5 cut(s) 177, 367, 485, 546, 828
Esp3I CGTCTC 1 cut(s) 241
FaqI GGGAC 3 cut(s) 54, 920, 1133
FauI CCCGC 1 cut(s) 894
FbaI TGATCA 2 cut(s) 61, 642
Fnu4HI GCNGC 3 cut(s) 621, 867, 1098
FokI GGATG 1 cut(s) 30
FriOI GRGCYC 1 cut(s) 411
Fsp4HI GCNGC 3 cut(s) 621, 867, 1098
FspBI CTAG 2 cut(s) 254, 893
GluI GCNGC 3 cut(s) 621, 867, 1098
HaeIII GGCC 3 cut(s) 496, 753, 1033
HapII CCGG 1 cut(s) 750
HgaI GACGC 1 cut(s) 83
HincII GTYRAC 3 cut(s) 34, 283, 835
HindII GTYRAC 3 cut(s) 34, 283, 835
HindIII AAGCTT 3 cut(s) 53, 440, 1176
HinfI GANTC 7 cut(s) 5, 26, 231, 298, 400, 508, 997
HpaI GTTAAC 1 cut(s) 283
HpaII CCGG 1 cut(s) 750
HphI GGTGA 4 cut(s) 163, 325, 374, 1126
Hpy166II GTNNAC 7 cut(s) 18, 34, 283, 565, 791, 835, 961
Hpy188I TCNGA 5 cut(s) 25, 66, 73, 722, 1062
Hpy188III TCNNGA 7 cut(s) 47, 254, 302, 404, 813, 1001, 1087
Hpy8I GTNNAC 7 cut(s) 18, 34, 283, 565, 791, 835, 961
Hpy99I CGWCG 1 cut(s) 77
HpyAV CCTTC 2 cut(s) 1006, 1110
HpyCH4III ACNGT 3 cut(s) 571, 601, 965
HpyCH4IV ACGT 4 cut(s) 186, 246, 426, 559
HpyCH4V TGCA 5 cut(s) 270, 311, 740, 791, 913
HpyF10VI GCNNNNNNNGC 1 cut(s) 898
HpyF3I CTNAG 5 cut(s) 108, 405, 438, 870, 939
HpySE526I ACGT 4 cut(s) 186, 246, 426, 559
Ksp22I TGATCA 2 cut(s) 61, 642
KspAI GTTAAC 1 cut(s) 283
Kzo9I GATC 9 cut(s) 61, 66, 615, 625, 642, 654, 759, 1041, 1057
LmnI GCTCC 4 cut(s) 356, 446, 542, 634
Lsp1109I GCAGC 3 cut(s) 632, 878, 1084
LweI GCATC 4 cut(s) 76, 247, 727, 1114
MaeI CTAG 2 cut(s) 254, 893
MaeII ACGT 4 cut(s) 186, 246, 426, 559
MaeIII GTNAC 5 cut(s) 362, 371, 514, 601, 1106
MalI GATC 9 cut(s) 63, 68, 617, 627, 644, 656, 761, 1043, 1059
MboI GATC 9 cut(s) 61, 66, 615, 625, 642, 654, 759, 1041, 1057
MboII GAAGA 3 cut(s) 679, 1075, 1102
MfeI CAATTG 1 cut(s) 265
MflI RGATCY 2 cut(s) 66, 1057
MhlI GDGCHC 2 cut(s) 411, 793
MluCI AATT 1 cut(s) 265
MlyI GAGTC 3 cut(s) 307, 394, 502
MmeI TCCRAC 2 cut(s) 96, 334
MseI TTAA 3 cut(s) 282, 630, 1050
MslI CAYNNNNRTG 3 cut(s) 152, 735, 798
MspA1I CMGCKG 1 cut(s) 623
MspCI CTTAAG 1 cut(s) 629
MspI CCGG 1 cut(s) 750
MspR9I CCNGG 2 cut(s) 1035, 1138
MunI CAATTG 1 cut(s) 265
MvaI CCWGG 2 cut(s) 1035, 1138
MwoI GCNNNNNNNGC 1 cut(s) 898
NcoI CCATGG 1 cut(s) 546
NdeII GATC 9 cut(s) 61, 66, 615, 625, 642, 654, 759, 1041, 1057
NheI GCTAGC 1 cut(s) 892
NlaIV GGNNCC 3 cut(s) 544, 552, 822
NmuCI GTSAC 5 cut(s) 362, 371, 514, 601, 1106
NspI RCATGY 3 cut(s) 219, 379, 641
OliI CACNNNNGTG 1 cut(s) 798
PciI ACATGT 1 cut(s) 375
PcsI WCGNNNNNNNCGW 2 cut(s) 81, 192
PfeI GAWTC 4 cut(s) 5, 26, 231, 997
PkrI GCNGC 3 cut(s) 622, 868, 1099
PleI GAGTC 3 cut(s) 306, 394, 502
PpsI GAGTC 3 cut(s) 306, 394, 502
Ppu21I YACGTR 1 cut(s) 560
PpuMI RGGWCCY 2 cut(s) 725, 820
PscI ACATGT 1 cut(s) 375
PshAI GACNNNNGTC 3 cut(s) 249, 369, 512
Psp124BI GAGCTC 1 cut(s) 411
Psp1406I AACGTT 1 cut(s) 186
Psp5II RGGWCCY 2 cut(s) 725, 820
Psp6I CCWGG 2 cut(s) 1033, 1136
PspEI GGTNACC 1 cut(s) 362
PspGI CCWGG 2 cut(s) 1033, 1136
PspN4I GGNNCC 3 cut(s) 544, 552, 822
PspPI GGNCC 3 cut(s) 725, 820, 1171
PspPPI RGGWCCY 2 cut(s) 725, 820
PsuI RGATCY 2 cut(s) 66, 1057
PvuII CAGCTG 1 cut(s) 623
RsaI GTAC 3 cut(s) 136, 527, 558
RsaNI GTAC 3 cut(s) 135, 526, 557
RseI CAYNNNNRTG 3 cut(s) 152, 735, 798
SacI GAGCTC 1 cut(s) 411
SaqAI TTAA 3 cut(s) 282, 630, 1050
SatI GCNGC 3 cut(s) 621, 867, 1098
Sau3AI GATC 9 cut(s) 61, 66, 615, 625, 642, 654, 759, 1041, 1057
Sau96I GGNCC 3 cut(s) 725, 820, 1171
SchI GAGTC 3 cut(s) 307, 394, 502
ScrFI CCNGG 2 cut(s) 1035, 1138
SduI GDGCHC 2 cut(s) 411, 793
SfaNI GCATC 4 cut(s) 76, 247, 727, 1114
SinI GGWCC 3 cut(s) 725, 820, 1171
SmiMI CAYNNNNRTG 3 cut(s) 152, 735, 798
SmlI CTYRAG 4 cut(s) 510, 629, 1001, 1157
SmoI CTYRAG 4 cut(s) 510, 629, 1001, 1157
Sse9I AATT 1 cut(s) 265
SsiI CCGC 2 cut(s) 540, 901
SspMI CTAG 2 cut(s) 254, 893
SstI GAGCTC 1 cut(s) 411
StyD4I CCNGG 2 cut(s) 1033, 1136
StyI CCWWGG 5 cut(s) 177, 367, 485, 546, 828
TaaI ACNGT 3 cut(s) 571, 601, 965
TaiI ACGT 4 cut(s) 189, 249, 429, 562
TaqI TCGA 2 cut(s) 84, 768
TasI AATT 1 cut(s) 265
TatI WGTACW 1 cut(s) 525
TfiI GAWTC 4 cut(s) 5, 26, 231, 997
Tru1I TTAA 3 cut(s) 282, 630, 1050
Tru9I TTAA 3 cut(s) 282, 630, 1050
TscAI CASTG 4 cut(s) 463, 574, 657, 892
TseFI GTSAC 5 cut(s) 362, 371, 514, 601, 1106
TseI GCWGC 3 cut(s) 620, 866, 1097
Tsp45I GTSAC 5 cut(s) 362, 371, 514, 601, 1106
TspDTI ATGAA 1 cut(s) 311
TspGWI ACGGA 2 cut(s) 19, 810
TspRI CASTG 4 cut(s) 463, 574, 657, 892
Vha464I CTTAAG 1 cut(s) 629
VneI GTGCAC 1 cut(s) 789
VpaK11BI GGWCC 3 cut(s) 725, 820, 1171
XbaI TCTAGA 1 cut(s) 253
XceI RCATGY 3 cut(s) 219, 379, 641
XcmI CCANNNNNNNNNTGG 1 cut(s) 145
XspI CTAG 2 cut(s) 254, 893
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.