FvH4_4g21340

Catalyzes the formation of S-adenosylmethionine from methionine and ATP

Basic Information

Type: gene
Biological Identity
fragaria_vesca
Fvb4
Physical Location & Seq
Forward (+)
24380914 .. 24383855
2942 bp
Loading structure...
UTR
Exon/CDS
Intron
FvH4_4g21340.t4

Sequence Viewer

Length: 1056 bp
ATGGCTCTTGAAACTTTCTTGTTCACCTCCGAATCCGTCAATGAGGGTCACCCAGACAAGCTCTGCGACCAGATCTCCGACGCCGTGCTCGACGCCTGCCTAGCTCAGGACGCCGACAGCAAGGTGGCTTGCGAGACTTGCACCAAGACCAACATGGTCATGGTGTTCGGTGAGATCACCACCAAGGCTAATGTCGACTACGAGAAGATCGTCCGTGACACTTGCCGCGAAATTGGGTTCGTTTCAGCTGATGTGGGTCTTGATGCCGACAACTGCAAGGTGCTCGTTAACATTGAGCAGCAGAGCCCTGACATTGCCCAAGGTGTCCATGGTCATTTGACCAAGAGGCCGGAGGAGATTGGAGCTGGTGACCAAGGTCACATGTTTGGCTATGCCACTGATGAGACCGAAGAGTTGATGCCTCTCAGCCATGTGCTTGCAACCAAGCTCGGTGCTAAGCTCACTGAAGTTCGCAAGAATGGTACTTGCGCATGGTTGAGGCCTGATGGCAAGACCCAAGTGACCGTTGAGTACTTCAATGACAACGGTGCTATGGTTCCAATCCGTGTCCACACTGTCCTGATTTCGACCCAGCACGATGAAACCGTGACCAACGATGAGATTGCTGCTGATCTGAAGGAGCATGTGATCAAGCCTGTGATCCCAGAGAAGTACCTTGATGAGAAGACCATCTTCCACTTGAACCCATCTGGCCGATTCGTCATTGGAGGGCCTCATGGTGATGCTGGTCTCACCGGCCGCAAGATCATCATCGACACCTACGGAGGATGGGGCGCTCACGGAGGTGGTGCCTTCTCCGGCAAGGACCCAACCAAGGTCGACAGGAGTGGAGCCTACATTGTGAGGCAGGCAGCCAAGTCCATCGTCGCCAGTGGACTCGCAAGGAGGCCTGGTATGATCGCCATCAACCTTGATCTCAAGAGGGGCAATGGAAGGTTTTTGAAGACTGCTGCTTATGGGCATTTTGGAAGGGATGATGCTGACTTCACCTGGGAGGTGGTGAAGCCACTCAAGTGGGATAAGGTTCAAGCTTGA

Protein Analysis

352

Amino Acids

38.21

Weight (kDa)

5.56

Isoelectric Point (pI)

23.23

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
S-AdoMet_synt_N PF00438 6 - 103 4.8e-43 S-adenosylmethionine synthetase, N-terminal domain
S-AdoMet_synt_M PF02772 119 - 240 3.9e-47 S-adenosylmethionine synthetase, central domain
S-AdoMet_synt_C PF02773 242 - 382 1.9e-61 S-adenosylmethionine synthetase, C-terminal domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc16I TGCGCA 1 cut(s) 490
AccB1I GGYRCC 1 cut(s) 809
AccI GTMKAC 2 cut(s) 195, 840
AccII CGCG 1 cut(s) 228
AciI CCGC 2 cut(s) 226, 760
AclWI GGATC 1 cut(s) 655
AcoI YGGCCR 2 cut(s) 712, 757
AcuI CTGAAG 2 cut(s) 486, 656
AcyI GRCGYC 3 cut(s) 81, 93, 111
AfaI GTAC 3 cut(s) 484, 533, 674
AfiI CCNNNNNNNGG 2 cut(s) 106, 835
AflIII ACRYGT 1 cut(s) 381
AgsI TTSAA 5 cut(s) 11, 538, 703, 964, 1049
AjnI CCWGG 2 cut(s) 910, 1010
AleI CACNNNNGTG 2 cut(s) 804, 1033
AluBI AGCT 7 cut(s) 61, 104, 248, 365, 448, 460, 1052
AluI AGCT 7 cut(s) 61, 104, 248, 365, 448, 460, 1052
Alw21I GWGCWC 2 cut(s) 90, 285
Alw26I GTCTC 3 cut(s) 128, 398, 755
AlwI GGATC 1 cut(s) 655
AoxI GGCC 6 cut(s) 347, 500, 712, 731, 757, 908
ApeKI GCWGC 4 cut(s) 298, 626, 872, 971
AspLEI GCGC 2 cut(s) 491, 797
AspS9I GGNCC 2 cut(s) 731, 826
AsuHPI GGTGA 9 cut(s) 16, 41, 169, 182, 380, 745, 752, 1000, 1033
AvaII GGWCC 1 cut(s) 826
BanI GGYRCC 1 cut(s) 809
BanII GRGCYC 1 cut(s) 308
BbsI GAAGAC 2 cut(s) 692, 971
Bbv12I GWGCWC 2 cut(s) 90, 285
BbvI GCAGC 4 cut(s) 310, 613, 884, 958
BccI CCATC 6 cut(s) 500, 698, 715, 783, 890, 932
BceAI ACGGC 1 cut(s) 68
BcgI CGANNNNNNTGC 4 cut(s) 265, 299, 605, 639
BciT130I CCWGG 2 cut(s) 912, 1012
BclI TGATCA 1 cut(s) 648
BcoDI GTCTC 3 cut(s) 128, 398, 755
BfaI CTAG 1 cut(s) 101
BfoI RGCGCY 1 cut(s) 798
BglII AGATCT 1 cut(s) 72
BisI GCNGC 6 cut(s) 226, 299, 627, 760, 873, 972
BlpI GCTNAGC 1 cut(s) 456
BlsI GCNGC 6 cut(s) 227, 300, 628, 761, 874, 973
BmcAI AGTACT 1 cut(s) 533
Bme1390I CCNGG 2 cut(s) 912, 1012
Bme18I GGWCC 1 cut(s) 826
BmgT120I GGNCC 2 cut(s) 731, 826
BmiI GGNNCC 4 cut(s) 558, 811, 828, 853
BmrFI CCNGG 2 cut(s) 912, 1012
BmsI GCATC 4 cut(s) 253, 408, 733, 988
BoxI GACNNNNGTC 1 cut(s) 375
BpiI GAAGAC 2 cut(s) 692, 971
Bpu10I CCTNAGC 1 cut(s) 105
Bpu1102I GCTNAGC 1 cut(s) 456
BpuEI CTTGAG 2 cut(s) 923, 1016
BsaBI GATNNNNATC 2 cut(s) 770, 923
BsaHI GRCGYC 3 cut(s) 81, 93, 111
BsaI GGTCTC 2 cut(s) 398, 755
BsaJI CCNNGG 6 cut(s) 183, 319, 328, 373, 834, 1011
BsaXI ACNNNNNCTCC 4 cut(s) 59, 89, 898, 928
Bsc4I CCNNNNNNNGG 2 cut(s) 106, 835
Bse118I RCCGGY 1 cut(s) 755
Bse1I ACTGG 1 cut(s) 891
Bse3DI GCAATG 2 cut(s) 312, 955
Bse8I GATNNNNATC 2 cut(s) 770, 923
BseBI CCWGG 2 cut(s) 912, 1012
BseDI CCNNGG 6 cut(s) 183, 319, 328, 373, 834, 1011
BseGI GGATG 2 cut(s) 794, 1000
BseJI GATNNNNATC 2 cut(s) 770, 923
BseLI CCNNNNNNNGG 2 cut(s) 106, 835
BseMI GCAATG 2 cut(s) 312, 955
BseMII CTCAG 2 cut(s) 119, 439
BseNI ACTGG 1 cut(s) 891
BseRI GAGGAG 1 cut(s) 368
BseX3I CGGCCG 1 cut(s) 757
BseXI GCAGC 4 cut(s) 310, 613, 884, 958
BseYI CCCAGC 1 cut(s) 591
Bsh1236I CGCG 1 cut(s) 228
Bsh1285I CGRYCG 1 cut(s) 760
BshFI GGCC 6 cut(s) 349, 502, 714, 733, 759, 910
BshNI GGYRCC 1 cut(s) 809
BsiEI CGRYCG 1 cut(s) 760
BsiHKAI GWGCWC 2 cut(s) 90, 285
BsiSI CCGG 3 cut(s) 350, 756, 819
BslI CCNNNNNNNGG 2 cut(s) 106, 835
BsmAI GTCTC 3 cut(s) 128, 398, 755
BsnI GGCC 6 cut(s) 349, 502, 714, 733, 759, 910
Bso31I GGTCTC 2 cut(s) 398, 755
Bsp1286I GDGCHC 3 cut(s) 90, 285, 308
Bsp143I GATC 9 cut(s) 72, 174, 207, 631, 648, 660, 765, 918, 934
Bsp1720I GCTNAGC 1 cut(s) 456
Bsp19I CCATGG 1 cut(s) 328
BspACI CCGC 2 cut(s) 226, 760
BspANI GGCC 6 cut(s) 349, 502, 714, 733, 759, 910
BspCNI CTCAG 2 cut(s) 118, 438
BspFNI CGCG 1 cut(s) 228
BspLI GGNNCC 4 cut(s) 558, 811, 828, 853
BspPI GGATC 1 cut(s) 655
BspT107I GGYRCC 1 cut(s) 809
BspTNI GGTCTC 2 cut(s) 398, 755
BsrDI GCAATG 2 cut(s) 312, 955
BsrFI RCCGGY 1 cut(s) 755
BsrI ACTGG 1 cut(s) 891
BssAI RCCGGY 1 cut(s) 755
BssECI CCNNGG 6 cut(s) 183, 319, 328, 373, 834, 1011
BssMI GATC 9 cut(s) 72, 174, 207, 631, 648, 660, 765, 918, 934
BssNI GRCGYC 3 cut(s) 81, 93, 111
BssT1I CCWWGG 5 cut(s) 183, 319, 328, 373, 834
Bst2UI CCWGG 2 cut(s) 912, 1012
Bst4CI ACNGT 4 cut(s) 526, 548, 577, 607
Bst6I CTCTTC 1 cut(s) 405
BstACI GRCGYC 3 cut(s) 81, 93, 111
BstC8I GCNNGC 4 cut(s) 97, 130, 438, 870
BstDEI CTNAG 3 cut(s) 105, 425, 456
BstDSI CCRYGG 1 cut(s) 328
BstEII GGTNACC 2 cut(s) 47, 368
BstENI CCTNNNNNAGG 1 cut(s) 104
BstF5I GGATG 2 cut(s) 794, 1000
BstFNI CGCG 1 cut(s) 228
BstH2I RGCGCY 1 cut(s) 798
BstHHI GCGC 2 cut(s) 491, 797
BstKTI GATC 9 cut(s) 75, 177, 210, 634, 651, 663, 768, 921, 937
BstMAI GTCTC 3 cut(s) 128, 398, 755
BstMBI GATC 9 cut(s) 72, 174, 207, 631, 648, 660, 765, 918, 934
BstMCI CGRYCG 1 cut(s) 760
BstMWI GCNNNNNNNGC 3 cut(s) 101, 110, 138
BstNI CCWGG 2 cut(s) 912, 1012
BstNSI RCATGY 2 cut(s) 385, 647
BstPAI GACNNNNGTC 1 cut(s) 375
BstPI GGTNACC 2 cut(s) 47, 368
BstSCI CCNGG 2 cut(s) 910, 1010
BstUI CGCG 1 cut(s) 228
BstV1I GCAGC 4 cut(s) 310, 613, 884, 958
BstV2I GAAGAC 2 cut(s) 692, 971
BstX2I RGATCY 1 cut(s) 72
BstXI CCANNNNNNTGG 1 cut(s) 1035
BstYI RGATCY 1 cut(s) 72
BstZI CGGCCG 1 cut(s) 757
BsuRI GGCC 6 cut(s) 349, 502, 714, 733, 759, 910
BtgI CCRYGG 1 cut(s) 328
BtsCI GGATG 2 cut(s) 794, 1000
BtsIMutI CAGTG 4 cut(s) 396, 462, 573, 898
Cac8I GCNNGC 4 cut(s) 97, 130, 438, 870
CfoI GCGC 2 cut(s) 491, 797
Cfr10I RCCGGY 1 cut(s) 755
Cfr13I GGNCC 2 cut(s) 731, 826
CseI GACGC 3 cut(s) 89, 101, 119
Csp6I GTAC 3 cut(s) 483, 532, 673
CviAII CATG 8 cut(s) 154, 160, 329, 382, 431, 492, 644, 737
CviQI GTAC 3 cut(s) 483, 532, 673
DdeI CTNAG 3 cut(s) 105, 425, 456
DpnI GATC 9 cut(s) 74, 176, 209, 633, 650, 662, 767, 920, 936
DpnII GATC 9 cut(s) 72, 174, 207, 631, 648, 660, 765, 918, 934
EaeI YGGCCR 2 cut(s) 712, 757
EagI CGGCCG 1 cut(s) 757
Eam1104I CTCTTC 1 cut(s) 405
EarI CTCTTC 1 cut(s) 405
EclXI CGGCCG 1 cut(s) 757
Eco130I CCWWGG 5 cut(s) 183, 319, 328, 373, 834
Eco147I AGGCCT 2 cut(s) 502, 910
Eco24I GRGCYC 1 cut(s) 308
Eco31I GGTCTC 2 cut(s) 398, 755
Eco47I GGWCC 1 cut(s) 826
Eco52I CGGCCG 1 cut(s) 757
Eco57I CTGAAG 2 cut(s) 486, 656
Eco91I GGTNACC 2 cut(s) 47, 368
EcoNI CCTNNNNNAGG 1 cut(s) 104
EcoO109I RGGNCCY 2 cut(s) 731, 826
EcoO65I GGTNACC 2 cut(s) 47, 368
EcoRII CCWGG 2 cut(s) 910, 1010
EcoT14I CCWWGG 5 cut(s) 183, 319, 328, 373, 834
EcoT38I GRGCYC 1 cut(s) 308
ErhI CCWWGG 5 cut(s) 183, 319, 328, 373, 834
FaeI CATG 8 cut(s) 157, 163, 332, 385, 434, 495, 647, 740
FalI AAGNNNNNCTT 2 cut(s) 677, 709
FatI CATG 8 cut(s) 153, 159, 328, 381, 430, 491, 643, 736
FbaI TGATCA 1 cut(s) 648
FblI GTMKAC 2 cut(s) 195, 840
Fnu4HI GCNGC 6 cut(s) 226, 299, 627, 760, 873, 972
FokI GGATG 2 cut(s) 801, 1007
FriOI GRGCYC 1 cut(s) 308
Fsp4HI GCNGC 6 cut(s) 226, 299, 627, 760, 873, 972
FspBI CTAG 1 cut(s) 101
FspI TGCGCA 1 cut(s) 490
GlaI GCGC 2 cut(s) 490, 796
GluI GCNGC 6 cut(s) 226, 299, 627, 760, 873, 972
GsaI CCCAGC 1 cut(s) 595
HaeII RGCGCY 1 cut(s) 798
HaeIII GGCC 6 cut(s) 349, 502, 714, 733, 759, 910
HapII CCGG 3 cut(s) 350, 756, 819
HgaI GACGC 3 cut(s) 89, 101, 119
HhaI GCGC 2 cut(s) 491, 797
Hin1I GRCGYC 3 cut(s) 81, 93, 111
Hin1II CATG 8 cut(s) 157, 163, 332, 385, 434, 495, 647, 740
Hin6I GCGC 2 cut(s) 489, 795
HinP1I GCGC 2 cut(s) 489, 795
HincII GTYRAC 3 cut(s) 196, 289, 841
HindII GTYRAC 3 cut(s) 196, 289, 841
HindIII AAGCTT 1 cut(s) 1050
HinfI GANTC 3 cut(s) 32, 717, 897
HpaI GTTAAC 1 cut(s) 289
HpaII CCGG 3 cut(s) 350, 756, 819
HphI GGTGA 9 cut(s) 16, 41, 169, 182, 380, 745, 752, 1000, 1033
Hpy166II GTNNAC 6 cut(s) 24, 196, 289, 571, 841, 896
Hpy188I TCNGA 3 cut(s) 31, 79, 636
Hpy188III TCNNGA 5 cut(s) 8, 107, 260, 580, 940
Hpy8I GTNNAC 6 cut(s) 24, 196, 289, 571, 841, 896
Hpy99I CGWCG 3 cut(s) 83, 95, 890
HpyAV CCTTC 4 cut(s) 631, 823, 948, 984
HpyCH4III ACNGT 4 cut(s) 526, 548, 577, 607
HpyCH4V TGCA 3 cut(s) 141, 276, 440
HpyF10VI GCNNNNNNNGC 3 cut(s) 101, 110, 138
HpyF3I CTNAG 3 cut(s) 105, 425, 456
Hsp92I GRCGYC 3 cut(s) 81, 93, 111
Hsp92II CATG 8 cut(s) 157, 163, 332, 385, 434, 495, 647, 740
HspAI GCGC 2 cut(s) 489, 795
Ksp22I TGATCA 1 cut(s) 648
KspAI GTTAAC 1 cut(s) 289
Kzo9I GATC 9 cut(s) 72, 174, 207, 631, 648, 660, 765, 918, 934
LmnI GCTCC 3 cut(s) 362, 640, 851
Lsp1109I GCAGC 4 cut(s) 310, 613, 884, 958
LweI GCATC 4 cut(s) 253, 408, 733, 988
MaeI CTAG 1 cut(s) 101
MaeIII GTNAC 6 cut(s) 47, 215, 368, 377, 520, 607
MalI GATC 9 cut(s) 74, 176, 209, 633, 650, 662, 767, 920, 936
MboI GATC 9 cut(s) 72, 174, 207, 631, 648, 660, 765, 918, 934
MboII GAAGA 5 cut(s) 217, 422, 685, 697, 976
MflI RGATCY 1 cut(s) 72
MhlI GDGCHC 3 cut(s) 90, 285, 308
MluCI AATT 1 cut(s) 231
MlyI GAGTC 1 cut(s) 891
MmeI TCCRAC 1 cut(s) 102
MseI TTAA 1 cut(s) 288
MslI CAYNNNNRTG 4 cut(s) 158, 741, 804, 1033
MspA1I CMGCKG 1 cut(s) 248
MspI CCGG 3 cut(s) 350, 756, 819
MspR9I CCNGG 2 cut(s) 912, 1012
MvaI CCWGG 2 cut(s) 912, 1012
MvnI CGCG 1 cut(s) 228
MwoI GCNNNNNNNGC 3 cut(s) 101, 110, 138
NcoI CCATGG 1 cut(s) 328
NdeII GATC 9 cut(s) 72, 174, 207, 631, 648, 660, 765, 918, 934
NlaIII CATG 8 cut(s) 157, 163, 332, 385, 434, 495, 647, 740
NlaIV GGNNCC 4 cut(s) 558, 811, 828, 853
NmuCI GTSAC 6 cut(s) 47, 215, 368, 377, 520, 607
NsbI TGCGCA 1 cut(s) 490
NspI RCATGY 2 cut(s) 385, 647
OliI CACNNNNGTG 2 cut(s) 804, 1033
PceI AGGCCT 2 cut(s) 502, 910
PciI ACATGT 1 cut(s) 381
PcsI WCGNNNNNNNCGW 3 cut(s) 87, 207, 603
PfeI GAWTC 2 cut(s) 32, 717
PkrI GCNGC 6 cut(s) 227, 300, 628, 761, 874, 973
PleI GAGTC 1 cut(s) 891
PpsI GAGTC 1 cut(s) 891
PpuMI RGGWCCY 1 cut(s) 826
PscI ACATGT 1 cut(s) 381
PshAI GACNNNNGTC 1 cut(s) 375
Psp5II RGGWCCY 1 cut(s) 826
Psp6I CCWGG 2 cut(s) 910, 1010
PspEI GGTNACC 2 cut(s) 47, 368
PspFI CCCAGC 1 cut(s) 591
PspGI CCWGG 2 cut(s) 910, 1010
PspN4I GGNNCC 4 cut(s) 558, 811, 828, 853
PspPI GGNCC 2 cut(s) 731, 826
PspPPI RGGWCCY 1 cut(s) 826
PsuI RGATCY 1 cut(s) 72
PvuII CAGCTG 1 cut(s) 248
RsaI GTAC 3 cut(s) 484, 533, 674
RsaNI GTAC 3 cut(s) 483, 532, 673
RseI CAYNNNNRTG 4 cut(s) 158, 741, 804, 1033
SalI GTCGAC 2 cut(s) 194, 839
SaqAI TTAA 1 cut(s) 288
SatI GCNGC 6 cut(s) 226, 299, 627, 760, 873, 972
Sau3AI GATC 9 cut(s) 72, 174, 207, 631, 648, 660, 765, 918, 934
Sau96I GGNCC 2 cut(s) 731, 826
ScaI AGTACT 1 cut(s) 533
SchI GAGTC 1 cut(s) 891
ScrFI CCNGG 2 cut(s) 912, 1012
SduI GDGCHC 3 cut(s) 90, 285, 308
SfaNI GCATC 4 cut(s) 253, 408, 733, 988
SinI GGWCC 1 cut(s) 826
SmiMI CAYNNNNRTG 4 cut(s) 158, 741, 804, 1033
SmlI CTYRAG 2 cut(s) 938, 1031
SmoI CTYRAG 2 cut(s) 938, 1031
Sse9I AATT 1 cut(s) 231
SseBI AGGCCT 2 cut(s) 502, 910
SsiI CCGC 2 cut(s) 226, 760
SspMI CTAG 1 cut(s) 101
StuI AGGCCT 2 cut(s) 502, 910
StyD4I CCNGG 2 cut(s) 910, 1010
StyI CCWWGG 5 cut(s) 183, 319, 328, 373, 834
TaaI ACNGT 4 cut(s) 526, 548, 577, 607
TaqI TCGA 5 cut(s) 90, 195, 587, 774, 840
TaqII GACCGA 1 cut(s) 422
TasI AATT 1 cut(s) 231
TatI WGTACW 1 cut(s) 531
TauI GCSGC 2 cut(s) 228, 762
TfiI GAWTC 2 cut(s) 32, 717
Tru1I TTAA 1 cut(s) 288
Tru9I TTAA 1 cut(s) 288
TscAI CASTG 4 cut(s) 403, 469, 580, 898
TseFI GTSAC 6 cut(s) 47, 215, 368, 377, 520, 607
TseI GCWGC 4 cut(s) 298, 626, 872, 971
Tsp45I GTSAC 6 cut(s) 47, 215, 368, 377, 520, 607
TspDTI ATGAA 1 cut(s) 615
TspGWI ACGGA 5 cut(s) 25, 203, 554, 798, 816
TspRI CASTG 4 cut(s) 403, 469, 580, 898
VpaK11BI GGWCC 1 cut(s) 826
XagI CCTNNNNNAGG 1 cut(s) 104
XceI RCATGY 2 cut(s) 385, 647
XcmI CCANNNNNNNNNTGG 3 cut(s) 151, 157, 326
XmiI GTMKAC 2 cut(s) 195, 840
XspI CTAG 1 cut(s) 101
ZrmI AGTACT 1 cut(s) 533
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.