AT3G54470

uridine 5'-monophosphate synthase

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
arabidopsis_thaliana
3
OG0015273
Physical Location & Seq
Reverse (-)
20168005 .. 20170320
2316 bp
Loading structure...
UTR
Exon/CDS
Intron
AT3G54470.1

Sequence Viewer

Length: 1431 bp
ATGTCAGCCATGGAAGCACTGATTCTCCAGCTGCATGAAATCGGCGCCGTGAAATTCGGCAATTTCAAGCTCAAATCTGGAATCTTTTCTCCGGTTTACATCGACCTTCGTCTCATCGTCTCTTATCCATCCCTCTTAACACAGATCTCTCAAACTCTCATCTCTTCTCTTCCACCTTCTGCAACCTTCGACGTCGTCTGTGGTGTTCCTTACACTGCTCTCCCTATCGCCACTGTTGTCTCTGTTTCCAATGGTATCCCTATGCTTATGCGGCGTAAGGAGATTAAAGACTATGGAACATCTAAAGCTATTGAAGGAATCTTCGAAAAGGATCAAACTTGTTTGATAATTGAAGATCTTGTAACTAGTGGTGCTTCTGTTCTCGAGACTGCTGCTCCTCTTCGTGCTGTGGGGTTAAAGGTTAGTGACGCGGTGGTTTTGATTGATAGGCAACAAGGGGGTAGGGAGAATCTAGCGGAGAATGGGATTAAGTTACATTCGATGATTATGTTGACGGATATGGTTAGGGTTTTGAAGGAAAAGGGGAAAATTGAAGTGGAGGTTGAAGTGAATTTGCTTAAGTTTTTGGAAGAGAATCGTAGGGTTAGTGTTCCAAGTGTGGAGAAACCTAAGCCTAAGCCTAGGGTTTTGGGGTTCAAGGAAAGGTCTGAGCTTTCTAAGAATCCGACAGGGAAGAAGCTGTTTGATATTATGTTGAAGAAGGAAACCAATCTTTGTTTAGCTGCTGATGTTGGAACTGCTGCTGAATTGCTTGACATCGCAGATAAGGTGGGACCAGAGATTTGTCTCTTGAAGACTCATGTTGATATACTGCCTGATTTCACCCCTGACTTTGGCTCTAAGCTCCGTGCGATTGCAGACAAGCACAAATTTCTCATATTTGAGGATCGCAAGTTTGCAGACATTGGTAACACTGTCACTATGCAGTATGAAGGAGGCATCTTTAAAATATTGGAGTGGGCTGATATTATCAACGCTCATGTAATATCGGGGCCAGGAATCGTGGATGGCCTGAAATTGAAGGGTATGCCTCGTGGTAGAGGTTTGCTTTTGCTTGCTGAAATGAGCTCTGCAGGTAACCTGGCTACAGGAGACTACACTGCAGCAGCTGTGAAAATCGCAGACGCTCATTCTGATTTTGTGATGGGATTCATCTCGGTGAATCCAGCATCTTGGAAATGCGGGTATGTGTATCCGTCTATGATTCATGCAACACCTGGTGTTCAAATGGTGAAAGGTGGTGATGCACTTGGTCAGCAGTATAACACTCCACACTCTGTGATTACTGAGAGGGGAAGTGATATTATAATCGTGGGACGGGGAATCATAAAGGCGGAAAACCCAGCAGAGACGGCTCATGAGTATAGAGTTCAAGGATGGAATGCATACTTGGAGAAATGCTCTCAGTAG

Protein Analysis

476

Amino Acids

51.85

Weight (kDa)

6.77

Isoelectric Point (pI)

19.41

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Pribosyltran PF00156 61 - 156 6.3e-07 Phosphoribosyl transferase domain
OMPdecase PF00215 243 - 462 1.4e-60 Orotidine 5'-phosphate decarboxylase / HUMPS family
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Orthologous Genes (Group: OG0015273)

Species Orthologous Gene IDs
arabidopsis_thaliana AT3G54470
fragaria_vesca FvH4_7g02810
malus_domestica MD09G1262400.v1.1
prunus_persica Prupe.2G032600_v2.0.a1
pyrus_communis pycom09g17680
rosa_chinensis RchiOBHm_Chr1g0323241
rosa_laevigata RLG00000030345
rosa_multiflora Rmu_sc0002132.1_g000005 Rmu_sc0002263.1_g000067
rosa_roxburghii Rroxscaffold_4G00326730
rosa_rugosa Rorug01G0036900
rosa_samantha Rh1AG054200 Rh1BG046900 Rh1CG055100 Rh1DG059000
rosa_wichuraiana Rw1G004720

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 1328
AatII GACGTC 1 cut(s) 195
Acc36I ACCTGC 1 cut(s) 1085
AccB1I GGYRCC 1 cut(s) 44
AccII CGCG 1 cut(s) 431
AciI CCGC 5 cut(s) 271, 431, 476, 1203, 1355
AclWI GGATC 2 cut(s) 339, 915
AcsI RAATTY 3 cut(s) 53, 571, 890
AcyI GRCGYC 2 cut(s) 45, 192
AdeI CACNNNGTG 2 cut(s) 1241, 1300
AfiI CCNNNNNNNGG 1 cut(s) 854
AflII CTTAAG 1 cut(s) 578
AhlI ACTAGT 1 cut(s) 365
AjnI CCWGG 3 cut(s) 1015, 1101, 1237
AjuI GAANNNNNNNTTGG 2 cut(s) 1394, 1426
AluBI AGCT 9 cut(s) 31, 70, 308, 673, 700, 743, 865, 1089, 1130
AluI AGCT 9 cut(s) 31, 70, 308, 673, 700, 743, 865, 1089, 1130
Alw21I GWGCWC 1 cut(s) 1091
Alw26I GTCTC 7 cut(s) 116, 124, 244, 380, 812, 1107, 1364
AlwI GGATC 2 cut(s) 339, 915
AlwNI CAGNNNCTG 1 cut(s) 1130
Ama87I CYCGRG 1 cut(s) 383
AoxI GGCC 2 cut(s) 1013, 1030
ApeKI GCWGC 6 cut(s) 31, 392, 743, 761, 1124, 1127
ApoI RAATTY 3 cut(s) 53, 571, 890
ArsI GACNNNNNNTTYG 2 cut(s) 786, 818
Asp700I GAANNNNTTC 1 cut(s) 85
AspA2I CCTAGG 1 cut(s) 641
AspLEI GCGC 1 cut(s) 47
AspS9I GGNCC 2 cut(s) 794, 1013
AsuHPI GGTGA 4 cut(s) 835, 1192, 1264, 1274
AsuII TTCGAA 1 cut(s) 324
AvaI CYCGRG 1 cut(s) 383
AvaII GGWCC 1 cut(s) 794
AvrII CCTAGG 1 cut(s) 641
BanI GGYRCC 1 cut(s) 44
BanII GRGCYC 1 cut(s) 1091
BauI CACGAG 1 cut(s) 1053
BbsI GAAGAC 1 cut(s) 821
Bbv12I GWGCWC 1 cut(s) 1091
BbvI GCAGC 6 cut(s) 18, 379, 730, 748, 1136, 1139
BccI CCATC 4 cut(s) 136, 1022, 1159, 1392
BceAI ACGGC 2 cut(s) 32, 1389
BcgI CGANNNNNNTGC 2 cut(s) 374, 408
BciT130I CCWGG 3 cut(s) 1017, 1103, 1239
BciVI GTATCC 2 cut(s) 266, 1224
BcoDI GTCTC 7 cut(s) 116, 124, 244, 380, 812, 1107, 1364
BcuI ACTAGT 1 cut(s) 365
BfaI CTAG 3 cut(s) 366, 473, 642
BfmI CTRYAG 3 cut(s) 1092, 1107, 1122
BfoI RGCGCY 1 cut(s) 48
BfrI CTTAAG 1 cut(s) 578
BfuAI ACCTGC 1 cut(s) 1085
BfuI GTATCC 2 cut(s) 266, 1224
BglII AGATCT 2 cut(s) 144, 355
BisI GCNGC 7 cut(s) 32, 272, 393, 744, 762, 1125, 1128
BlnI CCTAGG 1 cut(s) 641
BlsI GCNGC 7 cut(s) 33, 273, 394, 745, 763, 1126, 1129
Bme1390I CCNGG 3 cut(s) 1017, 1103, 1239
Bme18I GGWCC 1 cut(s) 794
BmeT110I CYCGRG 1 cut(s) 383
BmgT120I GGNCC 2 cut(s) 794, 1013
BmiI GGNNCC 3 cut(s) 46, 795, 1014
BmrFI CCNGG 3 cut(s) 1017, 1103, 1239
BmsI GCATC 3 cut(s) 969, 1199, 1255
BoxI GACNNNNGTC 1 cut(s) 108
BpiI GAAGAC 1 cut(s) 821
BplI GAGNNNNNCTC 1 cut(s) 1406
BpmI CTGGAG 1 cut(s) 11
Bpu10I CCTNAGC 2 cut(s) 630, 636
Bpu14I TTCGAA 1 cut(s) 324
BsaHI GRCGYC 2 cut(s) 45, 192
BsaJI CCNNGG 2 cut(s) 9, 641
BsaWI WCCGGW 1 cut(s) 91
BsaXI ACNNNNNCTCC 4 cut(s) 9, 39, 379, 409
Bsc4I CCNNNNNNNGG 1 cut(s) 854
BseBI CCWGG 3 cut(s) 1017, 1103, 1239
BseDI CCNNGG 2 cut(s) 9, 641
BseGI GGATG 3 cut(s) 128, 1033, 1403
BseLI CCNNNNNNNGG 1 cut(s) 854
BseMII CTCAG 2 cut(s) 660, 1299
BseRI GAGGAG 1 cut(s) 387
BseXI GCAGC 6 cut(s) 18, 379, 730, 748, 1136, 1139
BseYI CCCAGC 1 cut(s) 1363
Bsh1236I CGCG 1 cut(s) 431
BshFI GGCC 2 cut(s) 1015, 1032
BshNI GGYRCC 1 cut(s) 44
BsiHKAI GWGCWC 1 cut(s) 1091
BsiHKCI CYCGRG 1 cut(s) 383
BsiSI CCGG 1 cut(s) 92
BslFI GGGAC 2 cut(s) 807, 1350
BslI CCNNNNNNNGG 1 cut(s) 854
BsmAI GTCTC 7 cut(s) 116, 124, 244, 380, 812, 1107, 1364
BsmBI CGTCTC 3 cut(s) 116, 124, 1364
BsmFI GGGAC 2 cut(s) 807, 1350
BsmI GAATGC 1 cut(s) 1408
BsnI GGCC 2 cut(s) 1015, 1032
BsoBI CYCGRG 1 cut(s) 383
Bsp119I TTCGAA 1 cut(s) 324
Bsp1286I GDGCHC 1 cut(s) 1091
Bsp143I GATC 4 cut(s) 144, 331, 355, 907
Bsp19I CCATGG 1 cut(s) 9
BspACI CCGC 5 cut(s) 271, 431, 476, 1203, 1355
BspANI GGCC 2 cut(s) 1015, 1032
BspCNI CTCAG 2 cut(s) 661, 1300
BspFNI CGCG 1 cut(s) 431
BspHI TCATGA 1 cut(s) 1378
BspLI GGNNCC 3 cut(s) 46, 795, 1014
BspMAI CTGCAG 2 cut(s) 1096, 1126
BspMI ACCTGC 1 cut(s) 1085
BspPI GGATC 2 cut(s) 339, 915
BspT104I TTCGAA 1 cut(s) 324
BspT107I GGYRCC 1 cut(s) 44
BspTI CTTAAG 1 cut(s) 578
BssECI CCNNGG 2 cut(s) 9, 641
BssMI GATC 4 cut(s) 144, 331, 355, 907
BssNI GRCGYC 2 cut(s) 45, 192
BssSI CACGAG 1 cut(s) 1053
BssT1I CCWWGG 2 cut(s) 9, 641
Bst2BI CACGAG 1 cut(s) 1053
Bst2UI CCWGG 3 cut(s) 1017, 1103, 1239
Bst4CI ACNGT 2 cut(s) 235, 937
Bst6I CTCTTC 4 cut(s) 169, 174, 405, 585
BstACI GRCGYC 2 cut(s) 45, 192
BstAFI CTTAAG 1 cut(s) 578
BstBI TTCGAA 1 cut(s) 324
BstC8I GCNNGC 1 cut(s) 1077
BstDEI CTNAG 7 cut(s) 630, 636, 669, 678, 861, 1308, 1425
BstDSI CCRYGG 1 cut(s) 9
BstEII GGTNACC 1 cut(s) 1097
BstF5I GGATG 3 cut(s) 128, 1033, 1403
BstFNI CGCG 1 cut(s) 431
BstH2I RGCGCY 1 cut(s) 48
BstHHI GCGC 1 cut(s) 47
BstKTI GATC 4 cut(s) 147, 334, 358, 910
BstMAI GTCTC 7 cut(s) 116, 124, 244, 380, 812, 1107, 1364
BstMBI GATC 4 cut(s) 144, 331, 355, 907
BstMWI GCNNNNNNNGC 3 cut(s) 14, 271, 1373
BstNI CCWGG 3 cut(s) 1017, 1103, 1239
BstPAI GACNNNNGTC 1 cut(s) 108
BstPI GGTNACC 1 cut(s) 1097
BstSCI CCNGG 3 cut(s) 1015, 1101, 1237
BstSFI CTRYAG 3 cut(s) 1092, 1107, 1122
BstUI CGCG 1 cut(s) 431
BstV1I GCAGC 6 cut(s) 18, 379, 730, 748, 1136, 1139
BstV2I GAAGAC 1 cut(s) 821
BstX2I RGATCY 2 cut(s) 144, 355
BstXI CCANNNNNNTGG 1 cut(s) 1194
BstYI RGATCY 2 cut(s) 144, 355
BsuI GTATCC 2 cut(s) 266, 1224
BsuRI GGCC 2 cut(s) 1015, 1032
BtgI CCRYGG 1 cut(s) 9
BtgZI GCGATG 1 cut(s) 763
BtsCI GGATG 3 cut(s) 128, 1033, 1403
BtsI GCAGTG 2 cut(s) 213, 1119
BtsIMutI CAGTG 5 cut(s) 17, 213, 231, 933, 1119
BveI ACCTGC 1 cut(s) 1085
Cac8I GCNNGC 1 cut(s) 1077
CaiI CAGNNNCTG 1 cut(s) 1130
CciI TCATGA 1 cut(s) 1378
CfoI GCGC 1 cut(s) 47
Cfr13I GGNCC 2 cut(s) 794, 1013
CseI GACGC 2 cut(s) 437, 1154
CsiI ACCWGGT 1 cut(s) 1237
CviAII CATG 6 cut(s) 10, 35, 821, 1001, 1229, 1379
DdeI CTNAG 7 cut(s) 630, 636, 669, 678, 861, 1308, 1425
DinI GGCGCC 1 cut(s) 46
DpnI GATC 4 cut(s) 146, 333, 357, 909
DpnII GATC 4 cut(s) 144, 331, 355, 907
DraI TTTAAA 1 cut(s) 967
DraIII CACNNNGTG 2 cut(s) 1241, 1300
Eam1104I CTCTTC 4 cut(s) 169, 174, 405, 585
EarI CTCTTC 4 cut(s) 169, 174, 405, 585
EciI GGCGGA 1 cut(s) 1370
Ecl136II GAGCTC 1 cut(s) 1089
Eco130I CCWWGG 2 cut(s) 9, 641
Eco24I GRGCYC 1 cut(s) 1091
Eco47I GGWCC 1 cut(s) 794
Eco53kI GAGCTC 1 cut(s) 1089
Eco88I CYCGRG 1 cut(s) 383
Eco91I GGTNACC 1 cut(s) 1097
EcoICRI GAGCTC 1 cut(s) 1089
EcoO65I GGTNACC 1 cut(s) 1097
EcoRII CCWGG 3 cut(s) 1015, 1101, 1237
EcoT14I CCWWGG 2 cut(s) 9, 641
EcoT22I ATGCAT 1 cut(s) 1408
EcoT38I GRGCYC 1 cut(s) 1091
EgeI GGCGCC 1 cut(s) 46
EheI GGCGCC 1 cut(s) 46
ErhI CCWWGG 2 cut(s) 9, 641
Esp3I CGTCTC 3 cut(s) 116, 124, 1364
FaeI CATG 6 cut(s) 13, 38, 824, 1004, 1232, 1382
FaqI GGGAC 2 cut(s) 807, 1350
FatI CATG 6 cut(s) 9, 34, 820, 1000, 1228, 1378
FauI CCCGC 1 cut(s) 1196
Fnu4HI GCNGC 7 cut(s) 32, 272, 393, 744, 762, 1125, 1128
FokI GGATG 3 cut(s) 115, 1040, 1410
FriOI GRGCYC 1 cut(s) 1091
Fsp4HI GCNGC 7 cut(s) 32, 272, 393, 744, 762, 1125, 1128
FspBI CTAG 3 cut(s) 366, 473, 642
GlaI GCGC 1 cut(s) 46
GluI GCNGC 7 cut(s) 32, 272, 393, 744, 762, 1125, 1128
GsaI CCCAGC 1 cut(s) 1367
GsuI CTGGAG 1 cut(s) 11
HaeII RGCGCY 1 cut(s) 48
HaeIII GGCC 2 cut(s) 1015, 1032
HapII CCGG 1 cut(s) 92
HgaI GACGC 2 cut(s) 437, 1154
HhaI GCGC 1 cut(s) 47
Hin1I GRCGYC 2 cut(s) 45, 192
Hin1II CATG 6 cut(s) 13, 38, 824, 1004, 1232, 1382
Hin6I GCGC 1 cut(s) 45
HinP1I GCGC 1 cut(s) 45
HincII GTYRAC 1 cut(s) 513
HindII GTYRAC 1 cut(s) 513
HpaII CCGG 1 cut(s) 92
HphI GGTGA 4 cut(s) 835, 1192, 1264, 1274
Hpy166II GTNNAC 2 cut(s) 97, 513
Hpy188I TCNGA 3 cut(s) 670, 687, 1156
Hpy188III TCNNGA 5 cut(s) 78, 383, 385, 811, 1379
Hpy8I GTNNAC 2 cut(s) 97, 513
Hpy99I CGWCG 2 cut(s) 194, 197
HpyAV CCTTC 8 cut(s) 116, 186, 196, 308, 529, 715, 947, 1036
HpyCH4III ACNGT 2 cut(s) 235, 937
HpyCH4IV ACGT 1 cut(s) 192
HpyF10VI GCNNNNNNNGC 3 cut(s) 14, 271, 1373
HpyF3I CTNAG 7 cut(s) 630, 636, 669, 678, 861, 1308, 1425
HpySE526I ACGT 1 cut(s) 192
Hsp92I GRCGYC 2 cut(s) 45, 192
Hsp92II CATG 6 cut(s) 13, 38, 824, 1004, 1232, 1382
HspAI GCGC 1 cut(s) 45
KasI GGCGCC 1 cut(s) 44
Kzo9I GATC 4 cut(s) 144, 331, 355, 907
LmnI GCTCC 2 cut(s) 400, 870
Lsp1109I GCAGC 6 cut(s) 18, 379, 730, 748, 1136, 1139
LweI GCATC 3 cut(s) 969, 1199, 1255
MabI ACCWGGT 1 cut(s) 1237
MaeI CTAG 3 cut(s) 366, 473, 642
MaeII ACGT 1 cut(s) 192
MaeIII GTNAC 6 cut(s) 361, 425, 492, 929, 937, 1097
MalI GATC 4 cut(s) 146, 333, 357, 909
MboI GATC 4 cut(s) 144, 331, 355, 907
MboII GAAGA 9 cut(s) 156, 161, 313, 365, 392, 602, 706, 730, 826
MflI RGATCY 2 cut(s) 144, 355
MhlI GDGCHC 1 cut(s) 1091
MluCI AATT 8 cut(s) 53, 61, 348, 549, 571, 767, 890, 1037
Mly113I GGCGCC 1 cut(s) 45
MlyI GAGTC 1 cut(s) 811
MmeI TCCRAC 2 cut(s) 710, 733
MnlI CCTC 8 cut(s) 143, 408, 553, 898, 950, 1055, 1062, 1305
Mph1103I ATGCAT 1 cut(s) 1408
MroXI GAANNNNTTC 1 cut(s) 85
MseI TTAA 6 cut(s) 137, 285, 416, 489, 579, 966
MslI CAYNNNNRTG 1 cut(s) 1178
MspA1I CMGCKG 2 cut(s) 31, 1130
MspCI CTTAAG 1 cut(s) 578
MspI CCGG 1 cut(s) 92
MspR9I CCNGG 3 cut(s) 1017, 1103, 1239
Mva1269I GAATGC 1 cut(s) 1408
MvaI CCWGG 3 cut(s) 1017, 1103, 1239
MvnI CGCG 1 cut(s) 431
MwoI GCNNNNNNNGC 3 cut(s) 14, 271, 1373
NarI GGCGCC 1 cut(s) 45
NcoI CCATGG 1 cut(s) 9
NdeII GATC 4 cut(s) 144, 331, 355, 907
NlaIII CATG 6 cut(s) 13, 38, 824, 1004, 1232, 1382
NlaIV GGNNCC 3 cut(s) 46, 795, 1014
NmuCI GTSAC 2 cut(s) 425, 937
NsiI ATGCAT 1 cut(s) 1408
NspV TTCGAA 1 cut(s) 324
PaeR7I CTCGAG 1 cut(s) 383
PagI TCATGA 1 cut(s) 1378
PctI GAATGC 1 cut(s) 1408
PdmI GAANNNNTTC 1 cut(s) 85
PflFI GACNNNGTC 1 cut(s) 194
PkrI GCNGC 7 cut(s) 33, 273, 394, 745, 763, 1126, 1129
PleI GAGTC 1 cut(s) 811
PluTI GGCGCC 1 cut(s) 48
PpsI GAGTC 1 cut(s) 811
PshAI GACNNNNGTC 1 cut(s) 108
PsiI TTATAA 1 cut(s) 1328
Psp124BI GAGCTC 1 cut(s) 1091
Psp6I CCWGG 3 cut(s) 1015, 1101, 1237
PspEI GGTNACC 1 cut(s) 1097
PspFI CCCAGC 1 cut(s) 1363
PspGI CCWGG 3 cut(s) 1015, 1101, 1237
PspN4I GGNNCC 3 cut(s) 46, 795, 1014
PspPI GGNCC 2 cut(s) 794, 1013
PstI CTGCAG 2 cut(s) 1096, 1126
PstNI CAGNNNCTG 1 cut(s) 1130
PsuI RGATCY 2 cut(s) 144, 355
PsyI GACNNNGTC 1 cut(s) 194
PvuII CAGCTG 2 cut(s) 31, 1130
RseI CAYNNNNRTG 1 cut(s) 1178
SacI GAGCTC 1 cut(s) 1091
SaqAI TTAA 6 cut(s) 137, 285, 416, 489, 579, 966
SatI GCNGC 7 cut(s) 32, 272, 393, 744, 762, 1125, 1128
Sau3AI GATC 4 cut(s) 144, 331, 355, 907
Sau96I GGNCC 2 cut(s) 794, 1013
SchI GAGTC 1 cut(s) 811
ScrFI CCNGG 3 cut(s) 1017, 1103, 1239
SduI GDGCHC 1 cut(s) 1091
SexAI ACCWGGT 1 cut(s) 1237
SfaNI GCATC 3 cut(s) 969, 1199, 1255
SfcI CTRYAG 3 cut(s) 1092, 1107, 1122
SfoI GGCGCC 1 cut(s) 46
Sfr274I CTCGAG 1 cut(s) 383
SfuI TTCGAA 1 cut(s) 324
SinI GGWCC 1 cut(s) 794
SlaI CTCGAG 1 cut(s) 383
SmiMI CAYNNNNRTG 1 cut(s) 1178
SmlI CTYRAG 2 cut(s) 383, 578
SmoI CTYRAG 2 cut(s) 383, 578
SpeI ACTAGT 1 cut(s) 365
Sse9I AATT 8 cut(s) 53, 61, 348, 549, 571, 767, 890, 1037
SsiI CCGC 5 cut(s) 271, 431, 476, 1203, 1355
SspDI GGCGCC 1 cut(s) 44
SspI AATATT 1 cut(s) 972
SspMI CTAG 3 cut(s) 366, 473, 642
SstI GAGCTC 1 cut(s) 1091
StyD4I CCNGG 3 cut(s) 1015, 1101, 1237
StyI CCWWGG 2 cut(s) 9, 641
TaaI ACNGT 2 cut(s) 235, 937
TaiI ACGT 1 cut(s) 195
TaqI TCGA 5 cut(s) 102, 189, 324, 384, 500
TasI AATT 8 cut(s) 53, 61, 348, 549, 571, 767, 890, 1037
TauI GCSGC 1 cut(s) 274
Tru1I TTAA 6 cut(s) 137, 285, 416, 489, 579, 966
Tru9I TTAA 6 cut(s) 137, 285, 416, 489, 579, 966
TscAI CASTG 5 cut(s) 24, 220, 238, 940, 1126
TseFI GTSAC 2 cut(s) 425, 937
TseI GCWGC 6 cut(s) 31, 392, 743, 761, 1124, 1127
Tsp45I GTSAC 2 cut(s) 425, 937
TspDTI ATGAA 4 cut(s) 51, 966, 1162, 1217
TspGWI ACGGA 3 cut(s) 530, 857, 1206
TspRI CASTG 5 cut(s) 24, 220, 238, 940, 1126
Tth111I GACNNNGTC 1 cut(s) 194
Vha464I CTTAAG 1 cut(s) 578
VpaK11BI GGWCC 1 cut(s) 794
XapI RAATTY 3 cut(s) 53, 571, 890
XhoI CTCGAG 1 cut(s) 383
XmaJI CCTAGG 1 cut(s) 641
XmnI GAANNNNTTC 1 cut(s) 85
XspI CTAG 3 cut(s) 366, 473, 642
ZraI GACGTC 1 cut(s) 193
Zsp2I ATGCAT 1 cut(s) 1408
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.