Rw1G004720

Uridine 5-monophosphate

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_wichuraiana
Chr1
OG0015273
Physical Location & Seq
Reverse (-)
9070206 .. 9073869
3664 bp
Loading structure...
UTR
Exon/CDS
Intron
Rw1G004720.1

Sequence Viewer

Length: 1446 bp
ATGTCATCATCTCCGCCGTCGATGGAGTCCCTAATCCTACAGCTCCACGAAATCTCGGCCGTCAAGTTCGGCAACTTCAAACTGAAATCCGGCATCTCCTCCCCAATCTACATCGACCTCCGCCTCATCGTCTCCTACCCTTCCCTCCTCCGCCAAATCTCCCAAACCCTAATCTCCGCCGTCCCCTCCTCCACCCCCTACGACCTCCTCTGCGGCGTCCCCTACACCGCCCTCCCCATCGCCACCTGCATCAGCACCTCCCGCGACGTCCCCATGCTCATGCGCCGCAAGGAGGTCAAGGACTACGGCACCGCCAAGGCCATCGAGGGCTGCTTCTCCCCCGGCCAGGTCTGCCTCATCATCGAGGACCTCGTCACCAGCGGCGCCTCCGTCCTCGAGACCGCCGCGCCGCTCCGGGCCGCCGGGTTGAAGGTCTGCGACGCCGTTGTTTTGATCGACCGGGAGCAGGGGGGGAGGGAGAATCTGGAGGAGAACGGCATCCGGCTGCACGCGCTGTTCCGGCTGAGCGAGATGGTTAGGGTTTTGAAGGAGAAGGGGAAGGTGGCGGAGGAGACGGTGGCGGCTGTGATGAGGTTTCTGGAGGAGAATCGGAGAGTGGCGGTGCCCAAGGTGGAGAAGGAGAAGGTTAGGGTTAAGGGGTTAGGGTTTGAGGAGAGGGCCAAGCTGAGCAAGAATCAGACGGGGAAGAAGCTTTTTGAGGTCATGGAGAAGAAGAAGACCAATCTCTGCTTGGCTGCTGATGTCGCTACTGCCAAGGAGTTGCTCGACATTGCTGAAAAGGTTGGGCCTGAGATATGCTTATTGAAAACTCATGTTGACATACTGCCTGATTTTACTCCAGATTTTGGCTCTAAACTTCGGTTGATTGCAGAAAGACATAATTTCTTGATATTTGAAGACCGTAAGTTTGCAGACATTGGTAACACAGTAACAATGCAATATGAAGGAGGTATATTCCATATATTGGACTGGGCTGATATAGTAAATGCTCACATAATCTCTGGTCCAGGGATTGTTGATGGACTCAAGTTGAAGGGTTTGCCTCGTGGTAGAGGCCTGTTGCTGCTTGCCGAAATGAGCTCAGCTGGTAACCTTGCCAAGGGAGACTACACAGCTGCAGCAGTGAAGATTGCTGAAGACCATTCCGACTTTGTCATTGGCTTTATTTCGGTTAATCCAGCATCATGGCCAGGCGCACCAGTAAATCCAGCTTTCATCCAGGCAACCCCTGGAGTGCAAATGGTGACCGGTGGTGATGCTCTTGGACAGCAATATAACACTCCAAAATCTGTCATCTATGATAGAGGTAGCGACATCATAATTGTTGGCCGTGGAATTATAAAGGCTGCAAACCCAGCAGAGGCAGCTCATGAATACCGTCTTCAAGGATGGAATGCATATCTAGCTAAATGCAGCAGCAACTAA

Protein Analysis

481

Amino Acids

52.26

Weight (kDa)

8.0

Isoelectric Point (pI)

30.16

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
OMPdecase PF00215 247 - 466 1.1e-59 Orotidine 5'-phosphate decarboxylase / HUMPS family
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0015273)

Species Orthologous Gene IDs
arabidopsis_thaliana AT3G54470
fragaria_vesca FvH4_7g02810
malus_domestica MD09G1262400.v1.1
prunus_persica Prupe.2G032600_v2.0.a1
pyrus_communis pycom09g17680
rosa_chinensis RchiOBHm_Chr1g0323241
rosa_laevigata RLG00000030345
rosa_multiflora Rmu_sc0002132.1_g000005 Rmu_sc0002263.1_g000067
rosa_roxburghii Rroxscaffold_4G00326730
rosa_rugosa Rorug01G0036900
rosa_samantha Rh1AG054200 Rh1BG046900 Rh1CG055100 Rh1DG059000
rosa_wichuraiana Rw1G004720

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 1361
AarI CACCTGC 1 cut(s) 254
AatII GACGTC 1 cut(s) 270
Acc36I ACCTGC 1 cut(s) 254
AccB1I GGYRCC 3 cut(s) 308, 383, 622
AccB7I CCANNNNNTGG 2 cut(s) 866, 985
AccBSI CCGCTC 1 cut(s) 412
AccII CGCG 3 cut(s) 264, 407, 512
AcoI YGGCCR 4 cut(s) 57, 343, 1208, 1348
AcuI CTGAAG 1 cut(s) 1176
AcyI GRCGYC 4 cut(s) 216, 267, 384, 441
AfiI CCNNNNNNNGG 7 cut(s) 292, 346, 466, 866, 985, 1120, 1381
AgeI ACCGGT 1 cut(s) 1268
AgsI TTSAA 7 cut(s) 79, 430, 547, 826, 917, 1054, 1406
AjnI CCWGG 5 cut(s) 345, 1027, 1210, 1239, 1249
AluBI AGCT 9 cut(s) 43, 685, 712, 1101, 1106, 1136, 1232, 1388, 1427
AluI AGCT 9 cut(s) 43, 685, 712, 1101, 1106, 1136, 1232, 1388, 1427
Alw21I GWGCWC 1 cut(s) 1103
Alw26I GTCTC 4 cut(s) 136, 392, 566, 1119
Ama87I CYCGRG 1 cut(s) 395
AoxI GGCC 9 cut(s) 57, 318, 343, 417, 678, 806, 1075, 1208, 1348
ArsI GACNNNNNNTTYG 2 cut(s) 911, 943
AsiGI ACCGGT 1 cut(s) 1268
AspLEI GCGC 5 cut(s) 285, 386, 409, 514, 1217
AspS9I GGNCC 5 cut(s) 367, 417, 678, 806, 1025
AsuC2I CCSGG 4 cut(s) 342, 416, 424, 461
AsuHPI GGTGA 3 cut(s) 367, 1276, 1286
AvaI CYCGRG 1 cut(s) 395
AvaII GGWCC 2 cut(s) 367, 1025
BaeGI GKGCMC 1 cut(s) 627
BalI TGGCCA 1 cut(s) 1210
BanI GGYRCC 3 cut(s) 308, 383, 622
BanII GRGCYC 1 cut(s) 1103
BauI CACGAG 1 cut(s) 1065
BbsI GAAGAC 4 cut(s) 743, 924, 1164, 1394
Bbv12I GWGCWC 1 cut(s) 1103
BbvI GCAGC 8 cut(s) 317, 492, 742, 1071, 1123, 1151, 1354, 1397
BccI CCATC 6 cut(s) 16, 245, 329, 526, 1034, 1404
BceAI ACGGC 6 cut(s) 44, 164, 322, 428, 511, 1335
BciT130I CCWGG 5 cut(s) 347, 1029, 1212, 1241, 1251
BcnI CCSGG 4 cut(s) 342, 416, 424, 461
BcoDI GTCTC 4 cut(s) 136, 392, 566, 1119
BfaI CTAG 1 cut(s) 1424
BfmI CTRYAG 2 cut(s) 38, 1137
BfoI RGCGCY 1 cut(s) 387
BfuAI ACCTGC 1 cut(s) 254
BlpI GCTNAGC 3 cut(s) 524, 686, 1102
Bme1390I CCNGG 9 cut(s) 342, 347, 416, 424, 461, 1029, 1212, 1241, 1251
Bme18I GGWCC 2 cut(s) 367, 1025
BmeT110I CYCGRG 1 cut(s) 395
BmgT120I GGNCC 5 cut(s) 367, 417, 678, 806, 1025
BmiI GGNNCC 3 cut(s) 310, 385, 624
BmrFI CCNGG 9 cut(s) 342, 347, 416, 424, 461, 1029, 1212, 1241, 1251
BmrI ACTGGG 1 cut(s) 1000
BmsI GCATC 5 cut(s) 102, 258, 507, 1211, 1267
BmuI ACTGGG 1 cut(s) 1000
BpiI GAAGAC 4 cut(s) 743, 924, 1164, 1394
BpmI CTGGAG 4 cut(s) 506, 620, 843, 1272
Bpu1102I GCTNAGC 3 cut(s) 524, 686, 1102
BpuEI CTTGAG 1 cut(s) 1031
BpuMI CCSGG 4 cut(s) 342, 416, 424, 461
BsaHI GRCGYC 4 cut(s) 216, 267, 384, 441
BsaI GGTCTC 1 cut(s) 392
BsaJI CCNNGG 8 cut(s) 315, 340, 627, 774, 1028, 1119, 1249, 1351
BsaWI WCCGGW 1 cut(s) 1268
Bsc4I CCNNNNNNNGG 7 cut(s) 292, 346, 466, 866, 985, 1120, 1381
Bse118I RCCGGY 1 cut(s) 1268
Bse1I ACTGG 2 cut(s) 995, 1220
Bse3DI GCAATG 1 cut(s) 789
BseBI CCWGG 5 cut(s) 347, 1029, 1212, 1241, 1251
BseDI CCNNGG 8 cut(s) 315, 340, 627, 774, 1028, 1119, 1249, 1351
BseGI GGATG 3 cut(s) 498, 1236, 1415
BseLI CCNNNNNNNGG 7 cut(s) 292, 346, 466, 866, 985, 1120, 1381
BseMI GCAATG 1 cut(s) 789
BseMII CTCAG 4 cut(s) 515, 677, 801, 1116
BseNI ACTGG 2 cut(s) 995, 1220
BseRI GAGGAG 8 cut(s) 88, 137, 178, 197, 503, 584, 617, 686
BseSI GKGCMC 1 cut(s) 627
BseX3I CGGCCG 1 cut(s) 57
BseXI GCAGC 8 cut(s) 317, 492, 742, 1071, 1123, 1151, 1354, 1397
BseYI CCCAGC 1 cut(s) 1375
BsgI GTGCAG 1 cut(s) 491
Bsh1236I CGCG 3 cut(s) 264, 407, 512
Bsh1285I CGRYCG 2 cut(s) 60, 460
BshFI GGCC 9 cut(s) 59, 320, 345, 419, 680, 808, 1077, 1210, 1350
BshNI GGYRCC 3 cut(s) 308, 383, 622
BshTI ACCGGT 1 cut(s) 1268
BsiEI CGRYCG 2 cut(s) 60, 460
BsiHKAI GWGCWC 1 cut(s) 1103
BsiHKCI CYCGRG 1 cut(s) 395
BsiSI CCGG 8 cut(s) 90, 342, 415, 423, 460, 502, 520, 1269
BslFI GGGAC 4 cut(s) 13, 167, 203, 254
BslI CCNNNNNNNGG 7 cut(s) 292, 346, 466, 866, 985, 1120, 1381
BsmAI GTCTC 4 cut(s) 136, 392, 566, 1119
BsmBI CGTCTC 2 cut(s) 136, 566
BsmFI GGGAC 4 cut(s) 13, 167, 203, 254
BsmI GAATGC 1 cut(s) 1420
BsnI GGCC 9 cut(s) 59, 320, 345, 419, 680, 808, 1077, 1210, 1350
Bso31I GGTCTC 1 cut(s) 392
BsoBI CYCGRG 1 cut(s) 395
Bsp1286I GDGCHC 2 cut(s) 627, 1103
Bsp143I GATC 1 cut(s) 453
Bsp1720I GCTNAGC 3 cut(s) 524, 686, 1102
BspANI GGCC 9 cut(s) 59, 320, 345, 419, 680, 808, 1077, 1210, 1350
BspCNI CTCAG 4 cut(s) 516, 678, 802, 1115
BspFNI CGCG 3 cut(s) 264, 407, 512
BspHI TCATGA 1 cut(s) 1390
BspLI GGNNCC 3 cut(s) 310, 385, 624
BspMAI CTGCAG 1 cut(s) 1141
BspMI ACCTGC 1 cut(s) 254
BspT107I GGYRCC 3 cut(s) 308, 383, 622
BspTNI GGTCTC 1 cut(s) 392
BsrBI CCGCTC 1 cut(s) 412
BsrDI GCAATG 1 cut(s) 789
BsrFI RCCGGY 1 cut(s) 1268
BsrI ACTGG 2 cut(s) 995, 1220
BssAI RCCGGY 1 cut(s) 1268
BssECI CCNNGG 8 cut(s) 315, 340, 627, 774, 1028, 1119, 1249, 1351
BssMI GATC 1 cut(s) 453
BssNI GRCGYC 4 cut(s) 216, 267, 384, 441
BssSI CACGAG 1 cut(s) 1065
BssT1I CCWWGG 4 cut(s) 315, 627, 774, 1119
Bst2BI CACGAG 1 cut(s) 1065
Bst2UI CCWGG 5 cut(s) 347, 1029, 1212, 1241, 1251
Bst4CI ACNGT 4 cut(s) 577, 923, 949, 1400
BstACI GRCGYC 4 cut(s) 216, 267, 384, 441
BstC8I GCNNGC 2 cut(s) 510, 1089
BstDEI CTNAG 4 cut(s) 524, 686, 810, 1102
BstDSI CCRYGG 1 cut(s) 1351
BstEII GGTNACC 2 cut(s) 1109, 1264
BstENI CCTNNNNNAGG 1 cut(s) 1118
BstF5I GGATG 3 cut(s) 498, 1236, 1415
BstFNI CGCG 3 cut(s) 264, 407, 512
BstH2I RGCGCY 1 cut(s) 387
BstHHI GCGC 5 cut(s) 285, 386, 409, 514, 1217
BstKTI GATC 1 cut(s) 456
BstMAI GTCTC 4 cut(s) 136, 392, 566, 1119
BstMBI GATC 1 cut(s) 453
BstMCI CGRYCG 2 cut(s) 60, 460
BstMWI GCNNNNNNNGC 8 cut(s) 261, 351, 511, 520, 764, 1376, 1385, 1424
BstNI CCWGG 5 cut(s) 347, 1029, 1212, 1241, 1251
BstPI GGTNACC 2 cut(s) 1109, 1264
BstSCI CCNGG 9 cut(s) 340, 345, 414, 422, 459, 1027, 1210, 1239, 1249
BstSFI CTRYAG 2 cut(s) 38, 1137
BstSLI GKGCMC 1 cut(s) 627
BstUI CGCG 3 cut(s) 264, 407, 512
BstV1I GCAGC 8 cut(s) 317, 492, 742, 1071, 1123, 1151, 1354, 1397
BstV2I GAAGAC 4 cut(s) 743, 924, 1164, 1394
BstXI CCANNNNNNTGG 1 cut(s) 1206
BstZI CGGCCG 1 cut(s) 57
BsuRI GGCC 9 cut(s) 59, 320, 345, 419, 680, 808, 1077, 1210, 1350
BtgI CCRYGG 1 cut(s) 1351
BtgZI GCGATG 1 cut(s) 223
BtsCI GGATG 3 cut(s) 498, 1236, 1415
BtsI GCAGTG 1 cut(s) 1149
BtsIMutI CAGTG 1 cut(s) 1149
BveI ACCTGC 1 cut(s) 254
Cac8I GCNNGC 2 cut(s) 510, 1089
CciI TCATGA 1 cut(s) 1390
CfoI GCGC 5 cut(s) 285, 386, 409, 514, 1217
Cfr10I RCCGGY 1 cut(s) 1268
Cfr13I GGNCC 5 cut(s) 367, 417, 678, 806, 1025
CseI GACGC 2 cut(s) 205, 449
CspAI ACCGGT 1 cut(s) 1268
CviAII CATG 6 cut(s) 274, 280, 724, 833, 1206, 1391
DdeI CTNAG 4 cut(s) 524, 686, 810, 1102
DinI GGCGCC 1 cut(s) 385
DpnI GATC 1 cut(s) 455
DpnII GATC 1 cut(s) 453
EaeI YGGCCR 4 cut(s) 57, 343, 1208, 1348
EagI CGGCCG 1 cut(s) 57
EciI GGCGGA 4 cut(s) 110, 140, 166, 581
Ecl136II GAGCTC 1 cut(s) 1101
EclXI CGGCCG 1 cut(s) 57
Eco130I CCWWGG 4 cut(s) 315, 627, 774, 1119
Eco147I AGGCCT 1 cut(s) 1077
Eco24I GRGCYC 1 cut(s) 1103
Eco31I GGTCTC 1 cut(s) 392
Eco47I GGWCC 2 cut(s) 367, 1025
Eco52I CGGCCG 1 cut(s) 57
Eco53kI GAGCTC 1 cut(s) 1101
Eco57I CTGAAG 1 cut(s) 1176
Eco88I CYCGRG 1 cut(s) 395
Eco91I GGTNACC 2 cut(s) 1109, 1264
EcoICRI GAGCTC 1 cut(s) 1101
EcoNI CCTNNNNNAGG 1 cut(s) 1118
EcoO109I RGGNCCY 1 cut(s) 367
EcoO65I GGTNACC 2 cut(s) 1109, 1264
EcoRII CCWGG 5 cut(s) 345, 1027, 1210, 1239, 1249
EcoT14I CCWWGG 4 cut(s) 315, 627, 774, 1119
EcoT22I ATGCAT 1 cut(s) 1420
EcoT38I GRGCYC 1 cut(s) 1103
EgeI GGCGCC 1 cut(s) 385
EheI GGCGCC 1 cut(s) 385
ErhI CCWWGG 4 cut(s) 315, 627, 774, 1119
Esp3I CGTCTC 2 cut(s) 136, 566
FaeI CATG 6 cut(s) 277, 283, 727, 836, 1209, 1394
FaqI GGGAC 4 cut(s) 13, 167, 203, 254
FatI CATG 6 cut(s) 273, 279, 723, 832, 1205, 1390
FauI CCCGC 1 cut(s) 269
FokI GGATG 3 cut(s) 485, 1223, 1422
FriOI GRGCYC 1 cut(s) 1103
FspBI CTAG 1 cut(s) 1424
GlaI GCGC 5 cut(s) 284, 385, 408, 513, 1216
GsaI CCCAGC 1 cut(s) 1379
GsuI CTGGAG 4 cut(s) 506, 620, 843, 1272
HaeII RGCGCY 1 cut(s) 387
HaeIII GGCC 9 cut(s) 59, 320, 345, 419, 680, 808, 1077, 1210, 1350
HapII CCGG 8 cut(s) 90, 342, 415, 423, 460, 502, 520, 1269
HgaI GACGC 2 cut(s) 205, 449
HhaI GCGC 5 cut(s) 285, 386, 409, 514, 1217
Hin1I GRCGYC 4 cut(s) 216, 267, 384, 441
Hin1II CATG 6 cut(s) 277, 283, 727, 836, 1209, 1394
Hin6I GCGC 5 cut(s) 283, 384, 407, 512, 1215
HinP1I GCGC 5 cut(s) 283, 384, 407, 512, 1215
HincII GTYRAC 1 cut(s) 838
HindII GTYRAC 1 cut(s) 838
HindIII AAGCTT 1 cut(s) 710
HinfI GANTC 5 cut(s) 26, 481, 607, 694, 1044
HpaII CCGG 8 cut(s) 90, 342, 415, 423, 460, 502, 520, 1269
HphI GGTGA 3 cut(s) 367, 1276, 1286
Hpy166II GTNNAC 1 cut(s) 838
Hpy188I TCNGA 3 cut(s) 612, 699, 1168
Hpy188III TCNNGA 6 cut(s) 397, 485, 599, 860, 907, 1391
Hpy8I GTNNAC 1 cut(s) 838
Hpy99I CGWCG 3 cut(s) 22, 269, 443
HpyAV CCTTC 9 cut(s) 150, 424, 541, 547, 553, 631, 637, 959, 1048
HpyCH4III ACNGT 4 cut(s) 577, 923, 949, 1400
HpyCH4IV ACGT 1 cut(s) 267
HpyF10VI GCNNNNNNNGC 8 cut(s) 261, 351, 511, 520, 764, 1376, 1385, 1424
HpyF3I CTNAG 4 cut(s) 524, 686, 810, 1102
HpySE526I ACGT 1 cut(s) 267
Hsp92I GRCGYC 4 cut(s) 216, 267, 384, 441
Hsp92II CATG 6 cut(s) 277, 283, 727, 836, 1209, 1394
HspAI GCGC 5 cut(s) 283, 384, 407, 512, 1215
KasI GGCGCC 1 cut(s) 383
Kzo9I GATC 1 cut(s) 453
LmnI GCTCC 3 cut(s) 48, 417, 463
Lsp1109I GCAGC 8 cut(s) 317, 492, 742, 1071, 1123, 1151, 1354, 1397
LweI GCATC 5 cut(s) 102, 258, 507, 1211, 1267
MaeI CTAG 1 cut(s) 1424
MaeII ACGT 1 cut(s) 267
MaeIII GTNAC 5 cut(s) 373, 941, 949, 1109, 1264
MalI GATC 1 cut(s) 455
MbiI CCGCTC 1 cut(s) 412
MboI GATC 1 cut(s) 453
MboII GAAGA 8 cut(s) 718, 742, 745, 748, 929, 1159, 1169, 1394
MhlI GDGCHC 2 cut(s) 627, 1103
MlsI TGGCCA 1 cut(s) 1210
MluCI AATT 3 cut(s) 901, 1341, 1356
MluNI TGGCCA 1 cut(s) 1210
Mly113I GGCGCC 1 cut(s) 384
MlyI GAGTC 2 cut(s) 35, 1038
MmeI TCCRAC 1 cut(s) 1191
Mox20I TGGCCA 1 cut(s) 1210
Mph1103I ATGCAT 1 cut(s) 1420
MscI TGGCCA 1 cut(s) 1210
MseI TTAA 2 cut(s) 654, 1194
MslI CAYNNNNRTG 1 cut(s) 278
Msp20I TGGCCA 1 cut(s) 1210
MspA1I CMGCKG 3 cut(s) 381, 1106, 1136
MspI CCGG 8 cut(s) 90, 342, 415, 423, 460, 502, 520, 1269
MspR9I CCNGG 9 cut(s) 342, 347, 416, 424, 461, 1029, 1212, 1241, 1251
Mva1269I GAATGC 1 cut(s) 1420
MvaI CCWGG 5 cut(s) 347, 1029, 1212, 1241, 1251
MvnI CGCG 3 cut(s) 264, 407, 512
MwoI GCNNNNNNNGC 8 cut(s) 261, 351, 511, 520, 764, 1376, 1385, 1424
NarI GGCGCC 1 cut(s) 384
NciI CCSGG 4 cut(s) 342, 416, 424, 461
NdeII GATC 1 cut(s) 453
NlaIII CATG 6 cut(s) 277, 283, 727, 836, 1209, 1394
NlaIV GGNNCC 3 cut(s) 310, 385, 624
NmeAIII GCCGAG 1 cut(s) 35
NmuCI GTSAC 2 cut(s) 373, 1264
NsiI ATGCAT 1 cut(s) 1420
PaeR7I CTCGAG 1 cut(s) 395
PagI TCATGA 1 cut(s) 1390
PaqCI CACCTGC 1 cut(s) 254
PceI AGGCCT 1 cut(s) 1077
PcsI WCGNNNNNNNCGW 1 cut(s) 369
PctI GAATGC 1 cut(s) 1420
PfeI GAWTC 3 cut(s) 481, 607, 694
PflFI GACNNNGTC 2 cut(s) 371, 1172
PflMI CCANNNNNTGG 2 cut(s) 866, 985
PinAI ACCGGT 1 cut(s) 1268
PleI GAGTC 2 cut(s) 34, 1038
PluTI GGCGCC 1 cut(s) 387
PpsI GAGTC 2 cut(s) 34, 1038
PpuMI RGGWCCY 1 cut(s) 367
PsiI TTATAA 1 cut(s) 1361
Psp124BI GAGCTC 1 cut(s) 1103
Psp5II RGGWCCY 1 cut(s) 367
Psp6I CCWGG 5 cut(s) 345, 1027, 1210, 1239, 1249
PspEI GGTNACC 2 cut(s) 1109, 1264
PspFI CCCAGC 1 cut(s) 1375
PspGI CCWGG 5 cut(s) 345, 1027, 1210, 1239, 1249
PspN4I GGNNCC 3 cut(s) 310, 385, 624
PspPI GGNCC 5 cut(s) 367, 417, 678, 806, 1025
PspPPI RGGWCCY 1 cut(s) 367
PstI CTGCAG 1 cut(s) 1141
PsyI GACNNNGTC 2 cut(s) 371, 1172
PvuII CAGCTG 2 cut(s) 1106, 1136
RseI CAYNNNNRTG 1 cut(s) 278
SacI GAGCTC 1 cut(s) 1103
SaqAI TTAA 2 cut(s) 654, 1194
Sau3AI GATC 1 cut(s) 453
Sau96I GGNCC 5 cut(s) 367, 417, 678, 806, 1025
SchI GAGTC 2 cut(s) 35, 1038
ScrFI CCNGG 9 cut(s) 342, 347, 416, 424, 461, 1029, 1212, 1241, 1251
SduI GDGCHC 2 cut(s) 627, 1103
SfaNI GCATC 5 cut(s) 102, 258, 507, 1211, 1267
SfcI CTRYAG 2 cut(s) 38, 1137
SfoI GGCGCC 1 cut(s) 385
Sfr274I CTCGAG 1 cut(s) 395
SinI GGWCC 2 cut(s) 367, 1025
SlaI CTCGAG 1 cut(s) 395
SmiMI CAYNNNNRTG 1 cut(s) 278
SmlI CTYRAG 2 cut(s) 395, 1046
SmoI CTYRAG 2 cut(s) 395, 1046
Sse9I AATT 3 cut(s) 901, 1341, 1356
SseBI AGGCCT 1 cut(s) 1077
SspDI GGCGCC 1 cut(s) 383
SspMI CTAG 1 cut(s) 1424
SstI GAGCTC 1 cut(s) 1103
StuI AGGCCT 1 cut(s) 1077
StyD4I CCNGG 9 cut(s) 340, 345, 414, 422, 459, 1027, 1210, 1239, 1249
StyI CCWWGG 4 cut(s) 315, 627, 774, 1119
TaaI ACNGT 4 cut(s) 577, 923, 949, 1400
TaiI ACGT 1 cut(s) 270
TaqI TCGA 7 cut(s) 20, 114, 324, 363, 396, 456, 786
TasI AATT 3 cut(s) 901, 1341, 1356
TauI GCSGC 7 cut(s) 216, 288, 384, 407, 412, 422, 584
TfiI GAWTC 3 cut(s) 481, 607, 694
Tru1I TTAA 2 cut(s) 654, 1194
Tru9I TTAA 2 cut(s) 654, 1194
TscAI CASTG 1 cut(s) 1149
TseFI GTSAC 2 cut(s) 373, 1264
Tsp45I GTSAC 2 cut(s) 373, 1264
TspDTI ATGAA 3 cut(s) 978, 1225, 1407
TspGWI ACGGA 1 cut(s) 379
TspRI CASTG 1 cut(s) 1149
Tth111I GACNNNGTC 2 cut(s) 371, 1172
Van91I CCANNNNNTGG 2 cut(s) 866, 985
VpaK11BI GGWCC 2 cut(s) 367, 1025
XagI CCTNNNNNAGG 1 cut(s) 1118
XcmI CCANNNNNNNNNTGG 2 cut(s) 748, 1247
XhoI CTCGAG 1 cut(s) 395
XspI CTAG 1 cut(s) 1424
ZraI GACGTC 1 cut(s) 268
Zsp2I ATGCAT 1 cut(s) 1420
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.