Basic Information

Type: gene

Biological Identity

Species

rosa_roxburghii

Chromosome

GWHEROQ00000004

Orthogroup ID

OG0015273

Physical Location & Seq

Genomic Coordinates Forward (+)

58881274 .. 58885639

Gene Structure 4366 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rroxscaffold_4G00326730.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1542 bp

ATGTCATCATCTCCGCCGTCGATGGAGTCCCTAATCCTACAGCTCCACGAAATCTCGGCCGTCAAGTTCGGCAACTTCAAACTGAAATCCGGCATCTCCTCCCCAATCTACATCGACCTCCGCCTCATCGTCTCCTACCCTTCCCTCCTCCGCCAAATCTCCCAAACCCTAATCTCCGCCGTCCCCTCCTCCACCCCCTACGACCTCCTCTGCGGCGTCCCCTACACCGCCCTCCCCATCGCCACCTGCATCAGCACCTCCCGCGACGTCCCCATGCTCATGCGCCGCAAGGAGGTCAAGGACTACGGCACCGCCAAGGCCATCGAGGGCTGCTTCTCCCCCGGCCAGGTCTGCCTCATCATCGAGGACCTCGTCACCAGCGGCGCTTCCGTTCTCGAGACAGCCGCGCCGCTCCGGGCCGCCGGGTTGAAGGTCTGCGACGCCGTCGTTTTGATCGACCGGGAGCAGGGAGGGAGGGAGAATCTGGAGGAGAACGGCATCCGGCTGCACGCGCTGTTCCGGCTGAGCGAGATGGTTAGGGTTTTGAAGGAGAAGGGGAAGGTGGCGGAGGAGACGGTGGCGGCTGTGCTGAGGTTTCTGGAGGAGAATCGGAGAGTGGCGGTGCCGAAGGTGGAGAAGGAGAAGGTTAGGGTTAAGGGGTTAGGGTTTGAGGAGAGGGCCAAGCTGAGCAAGAATCCGACGGGGAAGAAGCTTTTCGAGGTCATGGAGAAGAAGAAGACCAATCTCTGCTTGGCTGCTGATGTTGCTACTGCCAAGGAGTTGCTCGACATTGCTGAAAAGGAAAGGAAAGCTTGTGATGTTTTAGAAACTTTTATGGTGGTAGTCCTTCCTGAGTTTGTTGTTAATTTGTTATGCTTTGCTGAAATGGGTGTATGGGTTGGGCCTGAGATATGCTTATTGAAAACTCATGTTGACATACTGCCTGATTTTACTCCAGATTTTGGCTCTAAACTTCGGTCGATTGCAGAAAGACATAATTTCTTGATATTTGAAGACCGTAAGTTTGCAGACATTGGTAACACAGTAACAATGCAATATGAAGGAGGTATATTCCATATATTGGACTGGGCTGATATAGTAAATGCTCACATAATCTCTGGTCCAGGGATTGTTGATGGACTGAAGTTGAAGGGTTTGCCTCGTGGTAGAGGCCTGTTGCTGCTTGCCGAAATGAGCTCAGCTGGTAACCTTGCCAAGGGAGACTACACAGCTGCAGCAGTGAAGATTGCTGAAGACCATTCCGACTTTGTCATTGGCTTTATTTCGGTTAATCCAGCATCATGGCCAGGCGCACCAGTAAATCCAGCTTTCATCCAGGCAACCCCTGGAGTGCAAATGGTGACCGGTGGTGATGCTCTTGGACAGCAATATAACACTCCAAAATCTGTCATCTATGATAGAGGTAGCGACATCATAATTGTTGGCCGTGGAATTATAAAGGCTGCAAACCCAGCAGAGGCAGCTCATGAATACCGTCTTCAAGGATGGAATGCATATCTAGCTAAATGCAGCAGCAACTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005829 GO:0006950 GO:0007154 GO:0008150 GO:0009267 GO:0009605 GO:0009987 GO:0009991 GO:0010035 GO:0010038 GO:0016036 GO:0031667 GO:0031668 GO:0031669 GO:0033554 GO:0042221 GO:0042594 GO:0044424 GO:0044444 GO:0044464 GO:0046686 GO:0050896 GO:0051716 GO:0071496

KEGG Pathways

Metabolic & Signaling

ko00240 ko00983 ko01100 map00240 map00983 map01100

Pfam Domains

Protein Families

OMPdecase Pribosyltran

Protein Analysis

513

Amino Acids

55.85

Weight (kDa)

6.74

Isoelectric Point (pI)

32.56

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
OMPdecase	PF00215	300 - 498	7.2e-51	Orotidine 5'-phosphate decarboxylase / HUMPS family

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0015273)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G54470
fragaria_vesca	FvH4_7g02810
malus_domestica	MD09G1262400.v1.1
prunus_persica	Prupe.2G032600_v2.0.a1
pyrus_communis	pycom09g17680
rosa_chinensis	RchiOBHm_Chr1g0323241
rosa_laevigata	RLG00000030345
rosa_multiflora	Rmu_sc0002132.1_g000005 Rmu_sc0002263.1_g000067
rosa_roxburghii	Rroxscaffold_4G00326730
rosa_rugosa	Rorug01G0036900
rosa_samantha	Rh1AG054200 Rh1BG046900 Rh1CG055100 Rh1DG059000
rosa_wichuraiana	Rw1G004720

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	1457
AarI	CACCTGC	1 cut(s)	254
AatII	GACGTC	1 cut(s)	270
Acc36I	ACCTGC	1 cut(s)	254
AccB1I	GGYRCC	2 cut(s)	308, 622
AccB7I	CCANNNNNTGG	2 cut(s)	962, 1081
AccBSI	CCGCTC	1 cut(s)	412
AccII	CGCG	3 cut(s)	264, 407, 512
AcoI	YGGCCR	4 cut(s)	57, 343, 1304, 1444
AcuI	CTGAAG	2 cut(s)	1163, 1272
AcyI	GRCGYC	3 cut(s)	216, 267, 441
AfiI	CCNNNNNNNGG	7 cut(s)	292, 346, 466, 962, 1081, 1216, 1477
AgeI	ACCGGT	1 cut(s)	1364
AgsI	TTSAA	7 cut(s)	79, 430, 547, 922, 1013, 1150, 1502
AjnI	CCWGG	5 cut(s)	345, 1123, 1306, 1335, 1345
Alw21I	GWGCWC	1 cut(s)	1199
Alw26I	GTCTC	4 cut(s)	136, 392, 566, 1215
Ama87I	CYCGRG	1 cut(s)	395
AoxI	GGCC	9 cut(s)	57, 318, 343, 417, 678, 902, 1171, 1304, 1444
ArsI	GACNNNNNNTTYG	2 cut(s)	1007, 1039
AsiGI	ACCGGT	1 cut(s)	1364
Asp700I	GAANNNNTTC	1 cut(s)	713
AspLEI	GCGC	5 cut(s)	285, 386, 409, 514, 1313
AspS9I	GGNCC	5 cut(s)	367, 417, 678, 902, 1121
AsuC2I	CCSGG	4 cut(s)	342, 416, 424, 461
AsuHPI	GGTGA	3 cut(s)	367, 1372, 1382
AvaI	CYCGRG	1 cut(s)	395
AvaII	GGWCC	2 cut(s)	367, 1121
BalI	TGGCCA	1 cut(s)	1306
BanI	GGYRCC	2 cut(s)	308, 622
BanII	GRGCYC	1 cut(s)	1199
BauI	CACGAG	1 cut(s)	1161
BbsI	GAAGAC	4 cut(s)	743, 1020, 1260, 1490
Bbv12I	GWGCWC	1 cut(s)	1199
BbvCI	CCTCAGC	1 cut(s)	590
BbvI	GCAGC	8 cut(s)	317, 492, 742, 1167, 1219, 1247, 1450, 1493
BccI	CCATC	6 cut(s)	16, 245, 329, 526, 1130, 1500
BceAI	ACGGC	6 cut(s)	44, 164, 322, 428, 511, 1431
BciT130I	CCWGG	5 cut(s)	347, 1125, 1308, 1337, 1347
BcnI	CCSGG	4 cut(s)	342, 416, 424, 461
BcoDI	GTCTC	4 cut(s)	136, 392, 566, 1215
BfaI	CTAG	1 cut(s)	1520
BfmI	CTRYAG	2 cut(s)	38, 1233
BfoI	RGCGCY	1 cut(s)	387
BfuAI	ACCTGC	1 cut(s)	254
BlpI	GCTNAGC	3 cut(s)	524, 686, 1198
Bme1390I	CCNGG	9 cut(s)	342, 347, 416, 424, 461, 1125, 1308, 1337, 1347
Bme18I	GGWCC	2 cut(s)	367, 1121
BmeT110I	CYCGRG	1 cut(s)	395
BmgT120I	GGNCC	5 cut(s)	367, 417, 678, 902, 1121
BmiI	GGNNCC	2 cut(s)	310, 624
BmrFI	CCNGG	9 cut(s)	342, 347, 416, 424, 461, 1125, 1308, 1337, 1347
BmrI	ACTGGG	1 cut(s)	1096
BmsI	GCATC	5 cut(s)	102, 258, 507, 1307, 1363
BmuI	ACTGGG	1 cut(s)	1096
BpiI	GAAGAC	4 cut(s)	743, 1020, 1260, 1490
BpmI	CTGGAG	4 cut(s)	506, 620, 939, 1368
Bpu10I	CCTNAGC	1 cut(s)	590
Bpu1102I	GCTNAGC	3 cut(s)	524, 686, 1198
BpuMI	CCSGG	4 cut(s)	342, 416, 424, 461
BsaHI	GRCGYC	3 cut(s)	216, 267, 441
BsaJI	CCNNGG	7 cut(s)	315, 340, 774, 1124, 1215, 1345, 1447
BsaWI	WCCGGW	1 cut(s)	1364
Bsc4I	CCNNNNNNNGG	7 cut(s)	292, 346, 466, 962, 1081, 1216, 1477
Bse118I	RCCGGY	1 cut(s)	1364
Bse1I	ACTGG	2 cut(s)	1091, 1316
Bse3DI	GCAATG	1 cut(s)	789
BseBI	CCWGG	5 cut(s)	347, 1125, 1308, 1337, 1347
BseDI	CCNNGG	7 cut(s)	315, 340, 774, 1124, 1215, 1345, 1447
BseGI	GGATG	3 cut(s)	498, 1332, 1511
BseLI	CCNNNNNNNGG	7 cut(s)	292, 346, 466, 962, 1081, 1216, 1477
BseMI	GCAATG	1 cut(s)	789
BseMII	CTCAG	6 cut(s)	515, 581, 677, 843, 897, 1212
BseNI	ACTGG	2 cut(s)	1091, 1316
BseRI	GAGGAG	8 cut(s)	88, 137, 178, 197, 503, 584, 617, 686
BseX3I	CGGCCG	1 cut(s)	57
BseXI	GCAGC	8 cut(s)	317, 492, 742, 1167, 1219, 1247, 1450, 1493
BseYI	CCCAGC	1 cut(s)	1471
BsgI	GTGCAG	1 cut(s)	491
Bsh1236I	CGCG	3 cut(s)	264, 407, 512
Bsh1285I	CGRYCG	3 cut(s)	60, 460, 980
BshFI	GGCC	9 cut(s)	59, 320, 345, 419, 680, 904, 1173, 1306, 1446
BshNI	GGYRCC	2 cut(s)	308, 622
BshTI	ACCGGT	1 cut(s)	1364
BsiEI	CGRYCG	3 cut(s)	60, 460, 980
BsiHKAI	GWGCWC	1 cut(s)	1199
BsiHKCI	CYCGRG	1 cut(s)	395
BsiSI	CCGG	8 cut(s)	90, 342, 415, 423, 460, 502, 520, 1365
BslFI	GGGAC	4 cut(s)	13, 167, 203, 254
BslI	CCNNNNNNNGG	7 cut(s)	292, 346, 466, 962, 1081, 1216, 1477
BsmAI	GTCTC	4 cut(s)	136, 392, 566, 1215
BsmBI	CGTCTC	2 cut(s)	136, 566
BsmFI	GGGAC	4 cut(s)	13, 167, 203, 254
BsmI	GAATGC	1 cut(s)	1516
BsnI	GGCC	9 cut(s)	59, 320, 345, 419, 680, 904, 1173, 1306, 1446
BsoBI	CYCGRG	1 cut(s)	395
Bsp1286I	GDGCHC	1 cut(s)	1199
Bsp143I	GATC	1 cut(s)	453
Bsp1720I	GCTNAGC	3 cut(s)	524, 686, 1198
BspANI	GGCC	9 cut(s)	59, 320, 345, 419, 680, 904, 1173, 1306, 1446
BspCNI	CTCAG	6 cut(s)	516, 582, 678, 844, 898, 1211
BspFNI	CGCG	3 cut(s)	264, 407, 512
BspHI	TCATGA	1 cut(s)	1486
BspLI	GGNNCC	2 cut(s)	310, 624
BspMAI	CTGCAG	1 cut(s)	1237
BspMI	ACCTGC	1 cut(s)	254
BspT107I	GGYRCC	2 cut(s)	308, 622
BsrBI	CCGCTC	1 cut(s)	412
BsrDI	GCAATG	1 cut(s)	789
BsrFI	RCCGGY	1 cut(s)	1364
BsrI	ACTGG	2 cut(s)	1091, 1316
BssAI	RCCGGY	1 cut(s)	1364
BssECI	CCNNGG	7 cut(s)	315, 340, 774, 1124, 1215, 1345, 1447
BssMI	GATC	1 cut(s)	453
BssNI	GRCGYC	3 cut(s)	216, 267, 441
BssSI	CACGAG	1 cut(s)	1161
BssT1I	CCWWGG	3 cut(s)	315, 774, 1215
Bst2BI	CACGAG	1 cut(s)	1161
Bst2UI	CCWGG	5 cut(s)	347, 1125, 1308, 1337, 1347
Bst4CI	ACNGT	4 cut(s)	577, 1019, 1045, 1496
BstACI	GRCGYC	3 cut(s)	216, 267, 441
BstC8I	GCNNGC	2 cut(s)	510, 1185
BstDEI	CTNAG	6 cut(s)	524, 590, 686, 852, 906, 1198
BstDSI	CCRYGG	1 cut(s)	1447
BstEII	GGTNACC	2 cut(s)	1205, 1360
BstENI	CCTNNNNNAGG	1 cut(s)	1214
BstF5I	GGATG	3 cut(s)	498, 1332, 1511
BstFNI	CGCG	3 cut(s)	264, 407, 512
BstH2I	RGCGCY	1 cut(s)	387
BstHHI	GCGC	5 cut(s)	285, 386, 409, 514, 1313
BstKTI	GATC	1 cut(s)	456
BstMAI	GTCTC	4 cut(s)	136, 392, 566, 1215
BstMBI	GATC	1 cut(s)	453
BstMCI	CGRYCG	3 cut(s)	60, 460, 980
BstMWI	GCNNNNNNNGC	8 cut(s)	261, 351, 511, 520, 764, 1472, 1481, 1520
BstNI	CCWGG	5 cut(s)	347, 1125, 1308, 1337, 1347
BstPI	GGTNACC	2 cut(s)	1205, 1360
BstSCI	CCNGG	9 cut(s)	340, 345, 414, 422, 459, 1123, 1306, 1335, 1345
BstSFI	CTRYAG	2 cut(s)	38, 1233
BstUI	CGCG	3 cut(s)	264, 407, 512
BstV1I	GCAGC	8 cut(s)	317, 492, 742, 1167, 1219, 1247, 1450, 1493
BstV2I	GAAGAC	4 cut(s)	743, 1020, 1260, 1490
BstXI	CCANNNNNNTGG	1 cut(s)	1302
BstZI	CGGCCG	1 cut(s)	57
BsuRI	GGCC	9 cut(s)	59, 320, 345, 419, 680, 904, 1173, 1306, 1446
BtgI	CCRYGG	1 cut(s)	1447
BtgZI	GCGATG	1 cut(s)	223
BtsCI	GGATG	3 cut(s)	498, 1332, 1511
BtsI	GCAGTG	1 cut(s)	1245
BtsIMutI	CAGTG	1 cut(s)	1245
BveI	ACCTGC	1 cut(s)	254
Cac8I	GCNNGC	2 cut(s)	510, 1185
CciI	TCATGA	1 cut(s)	1486
CfoI	GCGC	5 cut(s)	285, 386, 409, 514, 1313
Cfr10I	RCCGGY	1 cut(s)	1364
Cfr13I	GGNCC	5 cut(s)	367, 417, 678, 902, 1121
CseI	GACGC	2 cut(s)	205, 449
CspAI	ACCGGT	1 cut(s)	1364
CviAII	CATG	6 cut(s)	274, 280, 724, 929, 1302, 1487
DdeI	CTNAG	6 cut(s)	524, 590, 686, 852, 906, 1198
DpnI	GATC	1 cut(s)	455
DpnII	GATC	1 cut(s)	453
EaeI	YGGCCR	4 cut(s)	57, 343, 1304, 1444
EagI	CGGCCG	1 cut(s)	57
EciI	GGCGGA	4 cut(s)	110, 140, 166, 581
Ecl136II	GAGCTC	1 cut(s)	1197
EclXI	CGGCCG	1 cut(s)	57
Eco130I	CCWWGG	3 cut(s)	315, 774, 1215
Eco147I	AGGCCT	1 cut(s)	1173
Eco24I	GRGCYC	1 cut(s)	1199
Eco47I	GGWCC	2 cut(s)	367, 1121
Eco52I	CGGCCG	1 cut(s)	57
Eco53kI	GAGCTC	1 cut(s)	1197
Eco57I	CTGAAG	2 cut(s)	1163, 1272
Eco88I	CYCGRG	1 cut(s)	395
Eco91I	GGTNACC	2 cut(s)	1205, 1360
EcoICRI	GAGCTC	1 cut(s)	1197
EcoNI	CCTNNNNNAGG	1 cut(s)	1214
EcoO109I	RGGNCCY	1 cut(s)	367
EcoO65I	GGTNACC	2 cut(s)	1205, 1360
EcoRII	CCWGG	5 cut(s)	345, 1123, 1306, 1335, 1345
EcoT14I	CCWWGG	3 cut(s)	315, 774, 1215
EcoT22I	ATGCAT	1 cut(s)	1516
EcoT38I	GRGCYC	1 cut(s)	1199
ErhI	CCWWGG	3 cut(s)	315, 774, 1215
Esp3I	CGTCTC	2 cut(s)	136, 566
FaeI	CATG	6 cut(s)	277, 283, 727, 932, 1305, 1490
FalI	AAGNNNNNCTT	2 cut(s)	796, 828
FaqI	GGGAC	4 cut(s)	13, 167, 203, 254
FatI	CATG	6 cut(s)	273, 279, 723, 928, 1301, 1486
FauI	CCCGC	1 cut(s)	269
FokI	GGATG	3 cut(s)	485, 1319, 1518
FriOI	GRGCYC	1 cut(s)	1199
FspBI	CTAG	1 cut(s)	1520
GlaI	GCGC	5 cut(s)	284, 385, 408, 513, 1312
GsaI	CCCAGC	1 cut(s)	1475
GsuI	CTGGAG	4 cut(s)	506, 620, 939, 1368
HaeII	RGCGCY	1 cut(s)	387
HaeIII	GGCC	9 cut(s)	59, 320, 345, 419, 680, 904, 1173, 1306, 1446
HapII	CCGG	8 cut(s)	90, 342, 415, 423, 460, 502, 520, 1365
HgaI	GACGC	2 cut(s)	205, 449
HhaI	GCGC	5 cut(s)	285, 386, 409, 514, 1313
Hin1I	GRCGYC	3 cut(s)	216, 267, 441
Hin1II	CATG	6 cut(s)	277, 283, 727, 932, 1305, 1490
Hin6I	GCGC	5 cut(s)	283, 384, 407, 512, 1311
HinP1I	GCGC	5 cut(s)	283, 384, 407, 512, 1311
HincII	GTYRAC	1 cut(s)	934
HindII	GTYRAC	1 cut(s)	934
HindIII	AAGCTT	2 cut(s)	710, 810
HinfI	GANTC	4 cut(s)	26, 481, 607, 694
HpaII	CCGG	8 cut(s)	90, 342, 415, 423, 460, 502, 520, 1365
HphI	GGTGA	3 cut(s)	367, 1372, 1382
Hpy166II	GTNNAC	1 cut(s)	934
Hpy188I	TCNGA	3 cut(s)	612, 699, 1264
Hpy188III	TCNNGA	8 cut(s)	395, 397, 485, 599, 851, 956, 1003, 1487
Hpy8I	GTNNAC	1 cut(s)	934
Hpy99I	CGWCG	5 cut(s)	22, 269, 443, 449, 703
HpyCH4III	ACNGT	4 cut(s)	577, 1019, 1045, 1496
HpyCH4IV	ACGT	1 cut(s)	267
HpyF10VI	GCNNNNNNNGC	8 cut(s)	261, 351, 511, 520, 764, 1472, 1481, 1520
HpyF3I	CTNAG	6 cut(s)	524, 590, 686, 852, 906, 1198
HpySE526I	ACGT	1 cut(s)	267
Hsp92I	GRCGYC	3 cut(s)	216, 267, 441
Hsp92II	CATG	6 cut(s)	277, 283, 727, 932, 1305, 1490
HspAI	GCGC	5 cut(s)	283, 384, 407, 512, 1311
Kzo9I	GATC	1 cut(s)	453
LmnI	GCTCC	3 cut(s)	48, 417, 463
Lsp1109I	GCAGC	8 cut(s)	317, 492, 742, 1167, 1219, 1247, 1450, 1493
LweI	GCATC	5 cut(s)	102, 258, 507, 1307, 1363
MaeI	CTAG	1 cut(s)	1520
MaeII	ACGT	1 cut(s)	267
MaeIII	GTNAC	5 cut(s)	373, 1037, 1045, 1205, 1360
MalI	GATC	1 cut(s)	455
MbiI	CCGCTC	1 cut(s)	412
MboI	GATC	1 cut(s)	453
MboII	GAAGA	8 cut(s)	718, 742, 745, 748, 1025, 1255, 1265, 1490
MhlI	GDGCHC	1 cut(s)	1199
MlsI	TGGCCA	1 cut(s)	1306
MluCI	AATT	4 cut(s)	865, 997, 1437, 1452
MluNI	TGGCCA	1 cut(s)	1306
MlyI	GAGTC	1 cut(s)	35
MmeI	TCCRAC	2 cut(s)	722, 1287
Mox20I	TGGCCA	1 cut(s)	1306
Mph1103I	ATGCAT	1 cut(s)	1516
MroXI	GAANNNNTTC	1 cut(s)	713
MscI	TGGCCA	1 cut(s)	1306
MseI	TTAA	3 cut(s)	654, 864, 1290
MslI	CAYNNNNRTG	1 cut(s)	278
Msp20I	TGGCCA	1 cut(s)	1306
MspA1I	CMGCKG	3 cut(s)	381, 1202, 1232
MspI	CCGG	8 cut(s)	90, 342, 415, 423, 460, 502, 520, 1365
MspR9I	CCNGG	9 cut(s)	342, 347, 416, 424, 461, 1125, 1308, 1337, 1347
Mva1269I	GAATGC	1 cut(s)	1516
MvaI	CCWGG	5 cut(s)	347, 1125, 1308, 1337, 1347
MvnI	CGCG	3 cut(s)	264, 407, 512
MwoI	GCNNNNNNNGC	8 cut(s)	261, 351, 511, 520, 764, 1472, 1481, 1520
NciI	CCSGG	4 cut(s)	342, 416, 424, 461
NdeII	GATC	1 cut(s)	453
NlaIII	CATG	6 cut(s)	277, 283, 727, 932, 1305, 1490
NlaIV	GGNNCC	2 cut(s)	310, 624
NmeAIII	GCCGAG	1 cut(s)	35
NmuCI	GTSAC	2 cut(s)	373, 1360
NsiI	ATGCAT	1 cut(s)	1516
PaeR7I	CTCGAG	1 cut(s)	395
PagI	TCATGA	1 cut(s)	1486
PaqCI	CACCTGC	1 cut(s)	254
PceI	AGGCCT	1 cut(s)	1173
PcsI	WCGNNNNNNNCGW	2 cut(s)	369, 453
PctI	GAATGC	1 cut(s)	1516
PdmI	GAANNNNTTC	1 cut(s)	713
PfeI	GAWTC	3 cut(s)	481, 607, 694
PflFI	GACNNNGTC	3 cut(s)	371, 443, 1268
PflMI	CCANNNNNTGG	2 cut(s)	962, 1081
PinAI	ACCGGT	1 cut(s)	1364
PleI	GAGTC	1 cut(s)	34
PpsI	GAGTC	1 cut(s)	34
PpuMI	RGGWCCY	1 cut(s)	367
PsiI	TTATAA	1 cut(s)	1457
Psp124BI	GAGCTC	1 cut(s)	1199
Psp5II	RGGWCCY	1 cut(s)	367
Psp6I	CCWGG	5 cut(s)	345, 1123, 1306, 1335, 1345
PspEI	GGTNACC	2 cut(s)	1205, 1360
PspFI	CCCAGC	1 cut(s)	1471
PspGI	CCWGG	5 cut(s)	345, 1123, 1306, 1335, 1345
PspN4I	GGNNCC	2 cut(s)	310, 624
PspPI	GGNCC	5 cut(s)	367, 417, 678, 902, 1121
PspPPI	RGGWCCY	1 cut(s)	367
PstI	CTGCAG	1 cut(s)	1237
PsyI	GACNNNGTC	3 cut(s)	371, 443, 1268
PvuII	CAGCTG	2 cut(s)	1202, 1232
RseI	CAYNNNNRTG	1 cut(s)	278
SacI	GAGCTC	1 cut(s)	1199
SaqAI	TTAA	3 cut(s)	654, 864, 1290
Sau3AI	GATC	1 cut(s)	453
Sau96I	GGNCC	5 cut(s)	367, 417, 678, 902, 1121
SchI	GAGTC	1 cut(s)	35
ScrFI	CCNGG	9 cut(s)	342, 347, 416, 424, 461, 1125, 1308, 1337, 1347
SduI	GDGCHC	1 cut(s)	1199
SfaNI	GCATC	5 cut(s)	102, 258, 507, 1307, 1363
SfcI	CTRYAG	2 cut(s)	38, 1233
Sfr274I	CTCGAG	1 cut(s)	395
SinI	GGWCC	2 cut(s)	367, 1121
SlaI	CTCGAG	1 cut(s)	395
SmiMI	CAYNNNNRTG	1 cut(s)	278
SmlI	CTYRAG	1 cut(s)	395
SmoI	CTYRAG	1 cut(s)	395
Sse9I	AATT	4 cut(s)	865, 997, 1437, 1452
SseBI	AGGCCT	1 cut(s)	1173
SspMI	CTAG	1 cut(s)	1520
SstI	GAGCTC	1 cut(s)	1199
StuI	AGGCCT	1 cut(s)	1173
StyD4I	CCNGG	9 cut(s)	340, 345, 414, 422, 459, 1123, 1306, 1335, 1345
StyI	CCWWGG	3 cut(s)	315, 774, 1215
TaaI	ACNGT	4 cut(s)	577, 1019, 1045, 1496
TaiI	ACGT	1 cut(s)	270
TaqI	TCGA	9 cut(s)	20, 114, 324, 363, 396, 456, 717, 786, 980
TaqII	GACCGA	1 cut(s)	966
TasI	AATT	4 cut(s)	865, 997, 1437, 1452
TauI	GCSGC	7 cut(s)	216, 288, 384, 407, 412, 422, 584
TfiI	GAWTC	3 cut(s)	481, 607, 694
Tru1I	TTAA	3 cut(s)	654, 864, 1290
Tru9I	TTAA	3 cut(s)	654, 864, 1290
TscAI	CASTG	1 cut(s)	1245
TseFI	GTSAC	2 cut(s)	373, 1360
Tsp45I	GTSAC	2 cut(s)	373, 1360
TspDTI	ATGAA	3 cut(s)	1074, 1321, 1503
TspGWI	ACGGA	1 cut(s)	379
TspRI	CASTG	1 cut(s)	1245
Tth111I	GACNNNGTC	3 cut(s)	371, 443, 1268
Van91I	CCANNNNNTGG	2 cut(s)	962, 1081
VpaK11BI	GGWCC	2 cut(s)	367, 1121
XagI	CCTNNNNNAGG	1 cut(s)	1214
XcmI	CCANNNNNNNNNTGG	2 cut(s)	748, 1343
XhoI	CTCGAG	1 cut(s)	395
XmnI	GAANNNNTTC	1 cut(s)	713
XspI	CTAG	1 cut(s)	1520
ZraI	GACGTC	1 cut(s)	268
Zsp2I	ATGCAT	1 cut(s)	1516

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.