Basic Information

Type: gene

Biological Identity

Species

rosa_samantha

Chromosome

Chr1B

Orthogroup ID

OG0015273

Physical Location & Seq

Genomic Coordinates Reverse (-)

6504005 .. 6507690

Gene Structure 3686 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rh1BG046900.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1425 bp

ATGGAGTCCCTAATCCTGCAGCTCCACGAAATCTCGGCCGTCAAGTTCGGCAACTTCAAACTGAAATCCGGCATCTCCTCCCCAATCTACATCGACCTCCGCCTCATCGTCTCCTACCCTTCCCTCCTCCGCCAAATCTCCCAAACCCTAATCTCCGCCGTCCCCTCCTCCACCCCCTACGACCTCCTCTGCGGCGTCCCCTACACCGCCCTCCCCATCGCCACCTGCATCAGCACCTCCCGCGACGTCCCCATGCTCATGCGCCGCAAGGAGGTCAAGGACTACGGCACCGCCAAGGCCATCGAGGGCGACTTCACTCCCGGCCAGGTCTGCCTCATCATCGAGGACCTCGTCACCAGCGGCGCCTCCGTTCTCGAGACCGCCGCGCCGCTCCGGGCAGCCGGGTTGAAGGTCTGCGACGCCGTCGTTTTGATCGACCGGGAGCAGGGGGGGAGGGAGAATCTGGAGGAGAACGGCATCAGGCTGCACGCGCTGTTCCGGCTGAGCGAGATGGTTAGGGTTTTGAAGGAGAAGGGGAAGGTGGCGGAGGAGACGGTGGCGGCTGTGATGAGGTTTCTGGAGGAGAATCGGAGAGTGGCGGTGCCGAAGGTGGAGAAGGAGAAGGTTAGGGTTAAGGGGTTAGGGTTTGAGGAGAGGGCTAAGCTGAGCAAGAATCCGACGGGGAAGAAGCTTTTTGAGGTCATGGAGAAGAAGAAGACCAATCTCTGCTTGGCTGCTGATGTTGCTACGGCCAAGGAGTTGCTTGACATTGCTGAAAAGGTTGGGCCTGAGATATGCTTATTGAAAACTCATGTTGACATACTGCCTGATTTTACTCCAGATTTTGGCTCTAAACTTCGGTCGATTGCAGAAAGACATAATTTCTTGATATTTGAAGACCGTAAGTTTGCAGACATTGGTAACACAGTAACAATGCAATATGAAGGAGGTATATTCCATATATTGGACTGGGCTGATATAGTAAATGCTCACATAATCTCTGGTCCAGGGATTGTTGATGGACTGAAGTTGAAGGGTTTGCCTCGTGGTAGAGGCCTGTTGCTGCTTGCCGAAATGAGCTCAGCTGGTAACCTTGCCAAGGGAGACTACACAGCTGCAGCAGTGAAGATTGCTGAAGACCATTCCGACTTTGTCATTGGCTTTATTTCGGTTAATCCAGCATCATGGCCAGGCGCACCAGTAAATCCAGCTTTCATCCAGGCAACCCCTGGAGTGCAAATGGTGACCGGTGGTGATGCTCTTGGACAGCAATATAACACTCCAAAATCTGTCATCTATGATAGAGGTAGTGACATCATAATTGTTGGCCGTGGAATTGTAAAGGCTGCAAACCCAGCAGAGGCAGCTCATGAATACCGTCTTCAAGGATGGAATGCATATCTAGCTAAATGCAGCAGCAACTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005829 GO:0006950 GO:0007154 GO:0008150 GO:0009267 GO:0009605 GO:0009987 GO:0009991 GO:0010035 GO:0010038 GO:0016036 GO:0031667 GO:0031668 GO:0031669 GO:0033554 GO:0042221 GO:0042594 GO:0044424 GO:0044444 GO:0044464 GO:0046686 GO:0050896 GO:0051716 GO:0071496

KEGG Pathways

Metabolic & Signaling

ko00240 ko00983 ko01100 map00240 map00983 map01100

Pfam Domains

Protein Families

OMPdecase Pribosyltran

Protein Analysis

474

Amino Acids

51.54

Weight (kDa)

7.59

Isoelectric Point (pI)

26.86

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
OMPdecase	PF00215	240 - 459	4.1e-60	Orotidine 5'-phosphate decarboxylase / HUMPS family

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

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Align Labels (Cladogram)

Image

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Orthologous Genes (Group: OG0015273)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G54470
fragaria_vesca	FvH4_7g02810
malus_domestica	MD09G1262400.v1.1
prunus_persica	Prupe.2G032600_v2.0.a1
pyrus_communis	pycom09g17680
rosa_chinensis	RchiOBHm_Chr1g0323241
rosa_laevigata	RLG00000030345
rosa_multiflora	Rmu_sc0002132.1_g000005 Rmu_sc0002263.1_g000067
rosa_roxburghii	Rroxscaffold_4G00326730
rosa_rugosa	Rorug01G0036900
rosa_samantha	Rh1AG054200 Rh1BG046900 Rh1CG055100 Rh1DG059000
rosa_wichuraiana	Rw1G004720

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AarI	CACCTGC	1 cut(s)	233
AatII	GACGTC	1 cut(s)	249
Acc36I	ACCTGC	1 cut(s)	233
AccB1I	GGYRCC	3 cut(s)	287, 362, 601
AccB7I	CCANNNNNTGG	2 cut(s)	845, 964
AccBSI	CCGCTC	1 cut(s)	391
AccII	CGCG	3 cut(s)	243, 386, 491
AcoI	YGGCCR	5 cut(s)	36, 322, 750, 1187, 1327
AcuI	CTGAAG	2 cut(s)	1046, 1155
AcyI	GRCGYC	4 cut(s)	195, 246, 363, 420
AfiI	CCNNNNNNNGG	6 cut(s)	271, 445, 845, 964, 1099, 1360
AgeI	ACCGGT	1 cut(s)	1247
AgsI	TTSAA	7 cut(s)	58, 409, 526, 805, 896, 1033, 1385
AjnI	CCWGG	5 cut(s)	324, 1006, 1189, 1218, 1228
AluBI	AGCT	9 cut(s)	22, 664, 691, 1080, 1085, 1115, 1211, 1367, 1406
AluI	AGCT	9 cut(s)	22, 664, 691, 1080, 1085, 1115, 1211, 1367, 1406
Alw21I	GWGCWC	1 cut(s)	1082
Alw26I	GTCTC	4 cut(s)	115, 371, 545, 1098
Ama87I	CYCGRG	1 cut(s)	374
AoxI	GGCC	8 cut(s)	36, 297, 322, 750, 785, 1054, 1187, 1327
ArsI	GACNNNNNNTTYG	2 cut(s)	890, 922
AsiGI	ACCGGT	1 cut(s)	1247
AspLEI	GCGC	5 cut(s)	264, 365, 388, 493, 1196
AspS9I	GGNCC	3 cut(s)	346, 785, 1004
AsuC2I	CCSGG	4 cut(s)	321, 395, 403, 440
AsuHPI	GGTGA	3 cut(s)	346, 1255, 1265
AvaI	CYCGRG	1 cut(s)	374
AvaII	GGWCC	2 cut(s)	346, 1004
BalI	TGGCCA	1 cut(s)	1189
BanI	GGYRCC	3 cut(s)	287, 362, 601
BanII	GRGCYC	1 cut(s)	1082
BauI	CACGAG	1 cut(s)	1044
BbsI	GAAGAC	4 cut(s)	722, 903, 1143, 1373
Bbv12I	GWGCWC	1 cut(s)	1082
BbvI	GCAGC	9 cut(s)	31, 410, 471, 721, 1050, 1102, 1130, 1333, 1376
BccI	CCATC	5 cut(s)	224, 308, 505, 1013, 1383
BceAI	ACGGC	7 cut(s)	23, 143, 301, 407, 490, 765, 1314
BciT130I	CCWGG	5 cut(s)	326, 1008, 1191, 1220, 1230
BcnI	CCSGG	4 cut(s)	321, 395, 403, 440
BcoDI	GTCTC	4 cut(s)	115, 371, 545, 1098
BfaI	CTAG	1 cut(s)	1403
BfmI	CTRYAG	2 cut(s)	17, 1116
BfoI	RGCGCY	1 cut(s)	366
BfuAI	ACCTGC	1 cut(s)	233
BlpI	GCTNAGC	4 cut(s)	503, 660, 665, 1081
Bme1390I	CCNGG	9 cut(s)	321, 326, 395, 403, 440, 1008, 1191, 1220, 1230
Bme18I	GGWCC	2 cut(s)	346, 1004
BmeT110I	CYCGRG	1 cut(s)	374
BmgT120I	GGNCC	3 cut(s)	346, 785, 1004
BmiI	GGNNCC	3 cut(s)	289, 364, 603
BmrFI	CCNGG	9 cut(s)	321, 326, 395, 403, 440, 1008, 1191, 1220, 1230
BmrI	ACTGGG	1 cut(s)	979
BmsI	GCATC	5 cut(s)	81, 237, 486, 1190, 1246
BmuI	ACTGGG	1 cut(s)	979
BpiI	GAAGAC	4 cut(s)	722, 903, 1143, 1373
BpmI	CTGGAG	4 cut(s)	485, 599, 822, 1251
Bpu1102I	GCTNAGC	4 cut(s)	503, 660, 665, 1081
BpuMI	CCSGG	4 cut(s)	321, 395, 403, 440
BsaHI	GRCGYC	4 cut(s)	195, 246, 363, 420
BsaI	GGTCTC	1 cut(s)	371
BsaJI	CCNNGG	6 cut(s)	294, 753, 1007, 1098, 1228, 1330
BsaWI	WCCGGW	1 cut(s)	1247
Bsc4I	CCNNNNNNNGG	6 cut(s)	271, 445, 845, 964, 1099, 1360
Bse118I	RCCGGY	1 cut(s)	1247
Bse1I	ACTGG	2 cut(s)	974, 1199
Bse3DI	GCAATG	1 cut(s)	768
BseBI	CCWGG	5 cut(s)	326, 1008, 1191, 1220, 1230
BseDI	CCNNGG	6 cut(s)	294, 753, 1007, 1098, 1228, 1330
BseGI	GGATG	2 cut(s)	1215, 1394
BseLI	CCNNNNNNNGG	6 cut(s)	271, 445, 845, 964, 1099, 1360
BseMI	GCAATG	1 cut(s)	768
BseMII	CTCAG	4 cut(s)	494, 656, 780, 1095
BseNI	ACTGG	2 cut(s)	974, 1199
BseRI	GAGGAG	8 cut(s)	67, 116, 157, 176, 482, 563, 596, 665
BseX3I	CGGCCG	1 cut(s)	36
BseXI	GCAGC	9 cut(s)	31, 410, 471, 721, 1050, 1102, 1130, 1333, 1376
BseYI	CCCAGC	1 cut(s)	1354
BsgI	GTGCAG	1 cut(s)	470
Bsh1236I	CGCG	3 cut(s)	243, 386, 491
Bsh1285I	CGRYCG	3 cut(s)	39, 439, 863
BshFI	GGCC	8 cut(s)	38, 299, 324, 752, 787, 1056, 1189, 1329
BshNI	GGYRCC	3 cut(s)	287, 362, 601
BshTI	ACCGGT	1 cut(s)	1247
BsiEI	CGRYCG	3 cut(s)	39, 439, 863
BsiHKAI	GWGCWC	1 cut(s)	1082
BsiHKCI	CYCGRG	1 cut(s)	374
BsiSI	CCGG	7 cut(s)	69, 321, 394, 402, 439, 499, 1248
BslFI	GGGAC	3 cut(s)	146, 182, 233
BslI	CCNNNNNNNGG	6 cut(s)	271, 445, 845, 964, 1099, 1360
BsmAI	GTCTC	4 cut(s)	115, 371, 545, 1098
BsmBI	CGTCTC	2 cut(s)	115, 545
BsmFI	GGGAC	3 cut(s)	146, 182, 233
BsmI	GAATGC	1 cut(s)	1399
BsnI	GGCC	8 cut(s)	38, 299, 324, 752, 787, 1056, 1189, 1329
Bso31I	GGTCTC	1 cut(s)	371
BsoBI	CYCGRG	1 cut(s)	374
Bsp1286I	GDGCHC	1 cut(s)	1082
Bsp143I	GATC	1 cut(s)	432
Bsp1720I	GCTNAGC	4 cut(s)	503, 660, 665, 1081
BspANI	GGCC	8 cut(s)	38, 299, 324, 752, 787, 1056, 1189, 1329
BspCNI	CTCAG	4 cut(s)	495, 657, 781, 1094
BspFNI	CGCG	3 cut(s)	243, 386, 491
BspHI	TCATGA	1 cut(s)	1369
BspLI	GGNNCC	3 cut(s)	289, 364, 603
BspMAI	CTGCAG	2 cut(s)	21, 1120
BspMI	ACCTGC	1 cut(s)	233
BspT107I	GGYRCC	3 cut(s)	287, 362, 601
BspTNI	GGTCTC	1 cut(s)	371
BsrBI	CCGCTC	1 cut(s)	391
BsrDI	GCAATG	1 cut(s)	768
BsrFI	RCCGGY	1 cut(s)	1247
BsrI	ACTGG	2 cut(s)	974, 1199
BssAI	RCCGGY	1 cut(s)	1247
BssECI	CCNNGG	6 cut(s)	294, 753, 1007, 1098, 1228, 1330
BssMI	GATC	1 cut(s)	432
BssNI	GRCGYC	4 cut(s)	195, 246, 363, 420
BssSI	CACGAG	1 cut(s)	1044
BssT1I	CCWWGG	3 cut(s)	294, 753, 1098
Bst2BI	CACGAG	1 cut(s)	1044
Bst2UI	CCWGG	5 cut(s)	326, 1008, 1191, 1220, 1230
Bst4CI	ACNGT	4 cut(s)	556, 902, 928, 1379
BstACI	GRCGYC	4 cut(s)	195, 246, 363, 420
BstC8I	GCNNGC	2 cut(s)	489, 1068
BstDEI	CTNAG	5 cut(s)	503, 660, 665, 789, 1081
BstDSI	CCRYGG	1 cut(s)	1330
BstEII	GGTNACC	2 cut(s)	1088, 1243
BstENI	CCTNNNNNAGG	1 cut(s)	1097
BstF5I	GGATG	2 cut(s)	1215, 1394
BstFNI	CGCG	3 cut(s)	243, 386, 491
BstH2I	RGCGCY	1 cut(s)	366
BstHHI	GCGC	5 cut(s)	264, 365, 388, 493, 1196
BstKTI	GATC	1 cut(s)	435
BstMAI	GTCTC	4 cut(s)	115, 371, 545, 1098
BstMBI	GATC	1 cut(s)	432
BstMCI	CGRYCG	3 cut(s)	39, 439, 863
BstMWI	GCNNNNNNNGC	8 cut(s)	240, 330, 490, 499, 743, 1355, 1364, 1403
BstNI	CCWGG	5 cut(s)	326, 1008, 1191, 1220, 1230
BstPI	GGTNACC	2 cut(s)	1088, 1243
BstSCI	CCNGG	9 cut(s)	319, 324, 393, 401, 438, 1006, 1189, 1218, 1228
BstSFI	CTRYAG	2 cut(s)	17, 1116
BstUI	CGCG	3 cut(s)	243, 386, 491
BstV1I	GCAGC	9 cut(s)	31, 410, 471, 721, 1050, 1102, 1130, 1333, 1376
BstV2I	GAAGAC	4 cut(s)	722, 903, 1143, 1373
BstXI	CCANNNNNNTGG	1 cut(s)	1185
BstZI	CGGCCG	1 cut(s)	36
BsuRI	GGCC	8 cut(s)	38, 299, 324, 752, 787, 1056, 1189, 1329
BtgI	CCRYGG	1 cut(s)	1330
BtgZI	GCGATG	1 cut(s)	202
BtsCI	GGATG	2 cut(s)	1215, 1394
BtsI	GCAGTG	1 cut(s)	1128
BtsIMutI	CAGTG	1 cut(s)	1128
BveI	ACCTGC	1 cut(s)	233
Cac8I	GCNNGC	2 cut(s)	489, 1068
CciI	TCATGA	1 cut(s)	1369
CfoI	GCGC	5 cut(s)	264, 365, 388, 493, 1196
Cfr10I	RCCGGY	1 cut(s)	1247
Cfr13I	GGNCC	3 cut(s)	346, 785, 1004
CseI	GACGC	2 cut(s)	184, 428
CspAI	ACCGGT	1 cut(s)	1247
CviAII	CATG	6 cut(s)	253, 259, 703, 812, 1185, 1370
DdeI	CTNAG	5 cut(s)	503, 660, 665, 789, 1081
DinI	GGCGCC	1 cut(s)	364
DpnI	GATC	1 cut(s)	434
DpnII	GATC	1 cut(s)	432
EaeI	YGGCCR	5 cut(s)	36, 322, 750, 1187, 1327
EagI	CGGCCG	1 cut(s)	36
EciI	GGCGGA	4 cut(s)	89, 119, 145, 560
Ecl136II	GAGCTC	1 cut(s)	1080
EclXI	CGGCCG	1 cut(s)	36
Eco130I	CCWWGG	3 cut(s)	294, 753, 1098
Eco147I	AGGCCT	1 cut(s)	1056
Eco24I	GRGCYC	1 cut(s)	1082
Eco31I	GGTCTC	1 cut(s)	371
Eco47I	GGWCC	2 cut(s)	346, 1004
Eco52I	CGGCCG	1 cut(s)	36
Eco53kI	GAGCTC	1 cut(s)	1080
Eco57I	CTGAAG	2 cut(s)	1046, 1155
Eco88I	CYCGRG	1 cut(s)	374
Eco91I	GGTNACC	2 cut(s)	1088, 1243
EcoICRI	GAGCTC	1 cut(s)	1080
EcoNI	CCTNNNNNAGG	1 cut(s)	1097
EcoO109I	RGGNCCY	1 cut(s)	346
EcoO65I	GGTNACC	2 cut(s)	1088, 1243
EcoRII	CCWGG	5 cut(s)	324, 1006, 1189, 1218, 1228
EcoT14I	CCWWGG	3 cut(s)	294, 753, 1098
EcoT22I	ATGCAT	1 cut(s)	1399
EcoT38I	GRGCYC	1 cut(s)	1082
EgeI	GGCGCC	1 cut(s)	364
EheI	GGCGCC	1 cut(s)	364
ErhI	CCWWGG	3 cut(s)	294, 753, 1098
Esp3I	CGTCTC	2 cut(s)	115, 545
FaeI	CATG	6 cut(s)	256, 262, 706, 815, 1188, 1373
FaqI	GGGAC	3 cut(s)	146, 182, 233
FatI	CATG	6 cut(s)	252, 258, 702, 811, 1184, 1369
FauI	CCCGC	1 cut(s)	248
FokI	GGATG	2 cut(s)	1202, 1401
FriOI	GRGCYC	1 cut(s)	1082
FspBI	CTAG	1 cut(s)	1403
GlaI	GCGC	5 cut(s)	263, 364, 387, 492, 1195
GsaI	CCCAGC	1 cut(s)	1358
GsuI	CTGGAG	4 cut(s)	485, 599, 822, 1251
HaeII	RGCGCY	1 cut(s)	366
HaeIII	GGCC	8 cut(s)	38, 299, 324, 752, 787, 1056, 1189, 1329
HapII	CCGG	7 cut(s)	69, 321, 394, 402, 439, 499, 1248
HgaI	GACGC	2 cut(s)	184, 428
HhaI	GCGC	5 cut(s)	264, 365, 388, 493, 1196
Hin1I	GRCGYC	4 cut(s)	195, 246, 363, 420
Hin1II	CATG	6 cut(s)	256, 262, 706, 815, 1188, 1373
Hin6I	GCGC	5 cut(s)	262, 363, 386, 491, 1194
HinP1I	GCGC	5 cut(s)	262, 363, 386, 491, 1194
HincII	GTYRAC	1 cut(s)	817
HindII	GTYRAC	1 cut(s)	817
HindIII	AAGCTT	1 cut(s)	689
HinfI	GANTC	4 cut(s)	5, 460, 586, 673
HpaII	CCGG	7 cut(s)	69, 321, 394, 402, 439, 499, 1248
HphI	GGTGA	3 cut(s)	346, 1255, 1265
Hpy166II	GTNNAC	1 cut(s)	817
Hpy188I	TCNGA	3 cut(s)	591, 678, 1147
Hpy188III	TCNNGA	7 cut(s)	374, 376, 464, 578, 839, 886, 1370
Hpy8I	GTNNAC	1 cut(s)	817
Hpy99I	CGWCG	4 cut(s)	248, 422, 428, 682
HpyCH4III	ACNGT	4 cut(s)	556, 902, 928, 1379
HpyCH4IV	ACGT	1 cut(s)	246
HpyF10VI	GCNNNNNNNGC	8 cut(s)	240, 330, 490, 499, 743, 1355, 1364, 1403
HpyF3I	CTNAG	5 cut(s)	503, 660, 665, 789, 1081
HpySE526I	ACGT	1 cut(s)	246
Hsp92I	GRCGYC	4 cut(s)	195, 246, 363, 420
Hsp92II	CATG	6 cut(s)	256, 262, 706, 815, 1188, 1373
HspAI	GCGC	5 cut(s)	262, 363, 386, 491, 1194
KasI	GGCGCC	1 cut(s)	362
Kzo9I	GATC	1 cut(s)	432
LmnI	GCTCC	3 cut(s)	27, 396, 442
Lsp1109I	GCAGC	9 cut(s)	31, 410, 471, 721, 1050, 1102, 1130, 1333, 1376
LweI	GCATC	5 cut(s)	81, 237, 486, 1190, 1246
MaeI	CTAG	1 cut(s)	1403
MaeII	ACGT	1 cut(s)	246
MaeIII	GTNAC	6 cut(s)	352, 920, 928, 1088, 1243, 1310
MalI	GATC	1 cut(s)	434
MbiI	CCGCTC	1 cut(s)	391
MboI	GATC	1 cut(s)	432
MboII	GAAGA	8 cut(s)	697, 721, 724, 727, 908, 1138, 1148, 1373
MhlI	GDGCHC	1 cut(s)	1082
MlsI	TGGCCA	1 cut(s)	1189
MluCI	AATT	3 cut(s)	880, 1320, 1335
MluNI	TGGCCA	1 cut(s)	1189
Mly113I	GGCGCC	1 cut(s)	363
MlyI	GAGTC	1 cut(s)	14
MmeI	TCCRAC	2 cut(s)	701, 1170
Mox20I	TGGCCA	1 cut(s)	1189
Mph1103I	ATGCAT	1 cut(s)	1399
MscI	TGGCCA	1 cut(s)	1189
MseI	TTAA	2 cut(s)	633, 1173
MslI	CAYNNNNRTG	1 cut(s)	257
Msp20I	TGGCCA	1 cut(s)	1189
MspA1I	CMGCKG	3 cut(s)	360, 1085, 1115
MspI	CCGG	7 cut(s)	69, 321, 394, 402, 439, 499, 1248
MspR9I	CCNGG	9 cut(s)	321, 326, 395, 403, 440, 1008, 1191, 1220, 1230
Mva1269I	GAATGC	1 cut(s)	1399
MvaI	CCWGG	5 cut(s)	326, 1008, 1191, 1220, 1230
MvnI	CGCG	3 cut(s)	243, 386, 491
MwoI	GCNNNNNNNGC	8 cut(s)	240, 330, 490, 499, 743, 1355, 1364, 1403
NarI	GGCGCC	1 cut(s)	363
NciI	CCSGG	4 cut(s)	321, 395, 403, 440
NdeII	GATC	1 cut(s)	432
NlaIII	CATG	6 cut(s)	256, 262, 706, 815, 1188, 1373
NlaIV	GGNNCC	3 cut(s)	289, 364, 603
NmeAIII	GCCGAG	1 cut(s)	14
NmuCI	GTSAC	3 cut(s)	352, 1243, 1310
NsiI	ATGCAT	1 cut(s)	1399
PaeR7I	CTCGAG	1 cut(s)	374
PagI	TCATGA	1 cut(s)	1369
PaqCI	CACCTGC	1 cut(s)	233
PceI	AGGCCT	1 cut(s)	1056
PcsI	WCGNNNNNNNCGW	2 cut(s)	348, 432
PctI	GAATGC	1 cut(s)	1399
PfeI	GAWTC	3 cut(s)	460, 586, 673
PflFI	GACNNNGTC	3 cut(s)	350, 422, 1151
PflMI	CCANNNNNTGG	2 cut(s)	845, 964
PinAI	ACCGGT	1 cut(s)	1247
PleI	GAGTC	1 cut(s)	13
PluTI	GGCGCC	1 cut(s)	366
PpsI	GAGTC	1 cut(s)	13
PpuMI	RGGWCCY	1 cut(s)	346
Psp124BI	GAGCTC	1 cut(s)	1082
Psp5II	RGGWCCY	1 cut(s)	346
Psp6I	CCWGG	5 cut(s)	324, 1006, 1189, 1218, 1228
PspEI	GGTNACC	2 cut(s)	1088, 1243
PspFI	CCCAGC	1 cut(s)	1354
PspGI	CCWGG	5 cut(s)	324, 1006, 1189, 1218, 1228
PspN4I	GGNNCC	3 cut(s)	289, 364, 603
PspPI	GGNCC	3 cut(s)	346, 785, 1004
PspPPI	RGGWCCY	1 cut(s)	346
PstI	CTGCAG	2 cut(s)	21, 1120
PsyI	GACNNNGTC	3 cut(s)	350, 422, 1151
PvuII	CAGCTG	2 cut(s)	1085, 1115
RseI	CAYNNNNRTG	1 cut(s)	257
SacI	GAGCTC	1 cut(s)	1082
SaqAI	TTAA	2 cut(s)	633, 1173
Sau3AI	GATC	1 cut(s)	432
Sau96I	GGNCC	3 cut(s)	346, 785, 1004
SchI	GAGTC	1 cut(s)	14
ScrFI	CCNGG	9 cut(s)	321, 326, 395, 403, 440, 1008, 1191, 1220, 1230
SduI	GDGCHC	1 cut(s)	1082
SfaNI	GCATC	5 cut(s)	81, 237, 486, 1190, 1246
SfcI	CTRYAG	2 cut(s)	17, 1116
SfoI	GGCGCC	1 cut(s)	364
Sfr274I	CTCGAG	1 cut(s)	374
SinI	GGWCC	2 cut(s)	346, 1004
SlaI	CTCGAG	1 cut(s)	374
SmiMI	CAYNNNNRTG	1 cut(s)	257
SmlI	CTYRAG	1 cut(s)	374
SmoI	CTYRAG	1 cut(s)	374
Sse9I	AATT	3 cut(s)	880, 1320, 1335
SseBI	AGGCCT	1 cut(s)	1056
SspDI	GGCGCC	1 cut(s)	362
SspMI	CTAG	1 cut(s)	1403
SstI	GAGCTC	1 cut(s)	1082
StuI	AGGCCT	1 cut(s)	1056
StyD4I	CCNGG	9 cut(s)	319, 324, 393, 401, 438, 1006, 1189, 1218, 1228
StyI	CCWWGG	3 cut(s)	294, 753, 1098
TaaI	ACNGT	4 cut(s)	556, 902, 928, 1379
TaiI	ACGT	1 cut(s)	249
TaqI	TCGA	6 cut(s)	93, 303, 342, 375, 435, 863
TaqII	GACCGA	1 cut(s)	849
TasI	AATT	3 cut(s)	880, 1320, 1335
TauI	GCSGC	6 cut(s)	195, 267, 363, 386, 391, 563
TfiI	GAWTC	3 cut(s)	460, 586, 673
Tru1I	TTAA	2 cut(s)	633, 1173
Tru9I	TTAA	2 cut(s)	633, 1173
TscAI	CASTG	1 cut(s)	1128
TseFI	GTSAC	3 cut(s)	352, 1243, 1310
Tsp45I	GTSAC	3 cut(s)	352, 1243, 1310
TspDTI	ATGAA	3 cut(s)	957, 1204, 1386
TspGWI	ACGGA	1 cut(s)	358
TspRI	CASTG	1 cut(s)	1128
Tth111I	GACNNNGTC	3 cut(s)	350, 422, 1151
Van91I	CCANNNNNTGG	2 cut(s)	845, 964
VpaK11BI	GGWCC	2 cut(s)	346, 1004
XagI	CCTNNNNNAGG	1 cut(s)	1097
XcmI	CCANNNNNNNNNTGG	2 cut(s)	727, 1226
XhoI	CTCGAG	1 cut(s)	374
XspI	CTAG	1 cut(s)	1403
ZraI	GACGTC	1 cut(s)	247
Zsp2I	ATGCAT	1 cut(s)	1399

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.