50S ribosome-binding GTPase
Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.
| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT4G10620 |
| fragaria_vesca | FvH4_3g44540 FvH4_3g44540 |
| malus_domestica | MD03G1012100.v1.1 MD11G1014800.v1.1 |
| prunus_persica | Prupe.6G012300_v2.0.a1 Prupe.6G012300_v2.0.a1 |
| pyrus_communis | pycom03g01080 pycom11g01010 |
| rosa_chinensis | RchiOBHm_Chr5g0081231 RchiOBHm_Chr5g0081271 |
| rosa_laevigata | RLG00000036921 |
| rosa_multiflora | Rmu_sc0007768.1_g000003 Rmu_ssc0000432.1_g000069 |
| rosa_roxburghii | Rroxscaffold_1G00002240 |
| rosa_rugosa | Rorug05G0475100 |
| rosa_samantha | Rh5AG526700 Rh5BG550900 Rh5CG573800 Rh5DG561000 |
| rosa_wichuraiana | Rw5G048960 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AccB7I | CCANNNNNTGG | 1 cut(s) | 266 |
| AccII | CGCG | 2 cut(s) | 1535, 1755 |
| AciI | CCGC | 7 cut(s) | 155, 203, 1133, 1391, 1408, 1595, 1753 |
| AclWI | GGATC | 3 cut(s) | 524, 967, 1223 |
| AcsI | RAATTY | 4 cut(s) | 386, 1442, 1663, 1674 |
| AcuI | CTGAAG | 2 cut(s) | 624, 1755 |
| AcyI | GRCGYC | 1 cut(s) | 1307 |
| AfaI | GTAC | 2 cut(s) | 741, 982 |
| AfiI | CCNNNNNNNGG | 3 cut(s) | 266, 1049, 1397 |
| AjnI | CCWGG | 2 cut(s) | 259, 301 |
| AjuI | GAANNNNNNNTTGG | 2 cut(s) | 418, 450 |
| AleI | CACNNNNGTG | 1 cut(s) | 1242 |
| AloI | GAACNNNNNNTCC | 2 cut(s) | 577, 609 |
| Alw21I | GWGCWC | 2 cut(s) | 832, 1606 |
| Alw26I | GTCTC | 9 cut(s) | 580, 798, 1165, 1249, 1314, 1505, 1524, 1639, 1737 |
| AlwI | GGATC | 3 cut(s) | 524, 967, 1223 |
| AlwNI | CAGNNNCTG | 2 cut(s) | 602, 1730 |
| Ama87I | CYCGRG | 1 cut(s) | 1361 |
| ApeKI | GCWGC | 3 cut(s) | 14, 920, 1387 |
| ApoI | RAATTY | 4 cut(s) | 386, 1442, 1663, 1674 |
| ArsI | GACNNNNNNTTYG | 2 cut(s) | 468, 500 |
| AseI | ATTAAT | 1 cut(s) | 990 |
| AspS9I | GGNCC | 1 cut(s) | 1366 |
| AsuC2I | CCSGG | 2 cut(s) | 1050, 1119 |
| AsuII | TTCGAA | 1 cut(s) | 8 |
| AvaI | CYCGRG | 1 cut(s) | 1361 |
| AvaII | GGWCC | 1 cut(s) | 1366 |
| BanII | GRGCYC | 1 cut(s) | 832 |
| BauI | CACGAG | 2 cut(s) | 831, 1556 |
| BbsI | GAAGAC | 2 cut(s) | 1564, 1623 |
| Bbv12I | GWGCWC | 2 cut(s) | 832, 1606 |
| BbvI | GCAGC | 3 cut(s) | 26, 907, 1399 |
| BccI | CCATC | 6 cut(s) | 209, 328, 377, 472, 619, 644 |
| BceAI | ACGGC | 1 cut(s) | 1563 |
| BciT130I | CCWGG | 2 cut(s) | 261, 303 |
| BclI | TGATCA | 1 cut(s) | 568 |
| BcnI | CCSGG | 2 cut(s) | 1050, 1119 |
| BcoDI | GTCTC | 9 cut(s) | 580, 798, 1165, 1249, 1314, 1505, 1524, 1639, 1737 |
| BfaI | CTAG | 5 cut(s) | 450, 492, 590, 609, 744 |
| BisI | GCNGC | 5 cut(s) | 15, 921, 1388, 1391, 1753 |
| BlpI | GCTNAGC | 1 cut(s) | 675 |
| BlsI | GCNGC | 5 cut(s) | 16, 922, 1389, 1392, 1754 |
| Bme1390I | CCNGG | 4 cut(s) | 261, 303, 1050, 1119 |
| Bme18I | GGWCC | 1 cut(s) | 1366 |
| BmeT110I | CYCGRG | 1 cut(s) | 1361 |
| BmgT120I | GGNCC | 1 cut(s) | 1366 |
| BmiI | GGNNCC | 1 cut(s) | 1459 |
| BmrFI | CCNGG | 4 cut(s) | 261, 303, 1050, 1119 |
| BmsI | GCATC | 3 cut(s) | 625, 1144, 1283 |
| BpiI | GAAGAC | 2 cut(s) | 1564, 1623 |
| Bpu1102I | GCTNAGC | 1 cut(s) | 675 |
| Bpu14I | TTCGAA | 1 cut(s) | 8 |
| BpuEI | CTTGAG | 1 cut(s) | 360 |
| BpuMI | CCSGG | 2 cut(s) | 1050, 1119 |
| BsaBI | GATNNNNATC | 2 cut(s) | 348, 567 |
| BsaHI | GRCGYC | 1 cut(s) | 1307 |
| BsaI | GGTCTC | 1 cut(s) | 1505 |
| BsaJI | CCNNGG | 3 cut(s) | 259, 1118, 1202 |
| BsaXI | ACNNNNNCTCC | 4 cut(s) | 577, 607, 1024, 1054 |
| Bsc4I | CCNNNNNNNGG | 3 cut(s) | 266, 1049, 1397 |
| Bse1I | ACTGG | 1 cut(s) | 1461 |
| Bse3DI | GCAATG | 2 cut(s) | 818, 1586 |
| Bse8I | GATNNNNATC | 2 cut(s) | 348, 567 |
| BseBI | CCWGG | 2 cut(s) | 261, 303 |
| BseDI | CCNNGG | 3 cut(s) | 259, 1118, 1202 |
| BseGI | GGATG | 1 cut(s) | 298 |
| BseJI | GATNNNNATC | 2 cut(s) | 348, 567 |
| BseLI | CCNNNNNNNGG | 3 cut(s) | 266, 1049, 1397 |
| BseMI | GCAATG | 2 cut(s) | 818, 1586 |
| BseNI | ACTGG | 1 cut(s) | 1461 |
| BseRI | GAGGAG | 2 cut(s) | 99, 1178 |
| BseXI | GCAGC | 3 cut(s) | 26, 907, 1399 |
| BseYI | CCCAGC | 1 cut(s) | 929 |
| Bsh1236I | CGCG | 2 cut(s) | 1535, 1755 |
| BsiHKAI | GWGCWC | 2 cut(s) | 832, 1606 |
| BsiHKCI | CYCGRG | 1 cut(s) | 1361 |
| BsiSI | CCGG | 3 cut(s) | 972, 1049, 1118 |
| BslFI | GGGAC | 1 cut(s) | 1481 |
| BslI | CCNNNNNNNGG | 3 cut(s) | 266, 1049, 1397 |
| BsmAI | GTCTC | 9 cut(s) | 580, 798, 1165, 1249, 1314, 1505, 1524, 1639, 1737 |
| BsmBI | CGTCTC | 2 cut(s) | 1314, 1524 |
| BsmFI | GGGAC | 1 cut(s) | 1481 |
| BsmI | GAATGC | 2 cut(s) | 973, 1351 |
| Bso31I | GGTCTC | 1 cut(s) | 1505 |
| BsoBI | CYCGRG | 1 cut(s) | 1361 |
| Bsp119I | TTCGAA | 1 cut(s) | 8 |
| Bsp1286I | GDGCHC | 2 cut(s) | 832, 1606 |
| Bsp143I | GATC | 7 cut(s) | 358, 529, 568, 959, 1140, 1215, 1641 |
| Bsp1720I | GCTNAGC | 1 cut(s) | 675 |
| BspACI | CCGC | 7 cut(s) | 155, 203, 1133, 1391, 1408, 1595, 1753 |
| BspFNI | CGCG | 2 cut(s) | 1535, 1755 |
| BspLI | GGNNCC | 1 cut(s) | 1459 |
| BspPI | GGATC | 3 cut(s) | 524, 967, 1223 |
| BspQI | GCTCTTC | 1 cut(s) | 63 |
| BspT104I | TTCGAA | 1 cut(s) | 8 |
| BspTNI | GGTCTC | 1 cut(s) | 1505 |
| BsrDI | GCAATG | 2 cut(s) | 818, 1586 |
| BsrI | ACTGG | 1 cut(s) | 1461 |
| BssECI | CCNNGG | 3 cut(s) | 259, 1118, 1202 |
| BssMI | GATC | 7 cut(s) | 358, 529, 568, 959, 1140, 1215, 1641 |
| BssNI | GRCGYC | 1 cut(s) | 1307 |
| BssSI | CACGAG | 2 cut(s) | 831, 1556 |
| BssT1I | CCWWGG | 1 cut(s) | 1202 |
| Bst2BI | CACGAG | 2 cut(s) | 831, 1556 |
| Bst2UI | CCWGG | 2 cut(s) | 261, 303 |
| Bst4CI | ACNGT | 6 cut(s) | 538, 577, 616, 1234, 1300, 1633 |
| Bst6I | CTCTTC | 5 cut(s) | 63, 73, 181, 929, 1410 |
| BstACI | GRCGYC | 1 cut(s) | 1307 |
| BstBI | TTCGAA | 1 cut(s) | 8 |
| BstDEI | CTNAG | 6 cut(s) | 506, 663, 675, 765, 858, 1101 |
| BstF5I | GGATG | 1 cut(s) | 298 |
| BstFNI | CGCG | 2 cut(s) | 1535, 1755 |
| BstKTI | GATC | 7 cut(s) | 361, 532, 571, 962, 1143, 1218, 1644 |
| BstMAI | GTCTC | 9 cut(s) | 580, 798, 1165, 1249, 1314, 1505, 1524, 1639, 1737 |
| BstMBI | GATC | 7 cut(s) | 358, 529, 568, 959, 1140, 1215, 1641 |
| BstMWI | GCNNNNNNNGC | 3 cut(s) | 163, 605, 926 |
| BstNI | CCWGG | 2 cut(s) | 261, 303 |
| BstSCI | CCNGG | 4 cut(s) | 259, 301, 1048, 1117 |
| BstUI | CGCG | 2 cut(s) | 1535, 1755 |
| BstV1I | GCAGC | 3 cut(s) | 26, 907, 1399 |
| BstV2I | GAAGAC | 2 cut(s) | 1564, 1623 |
| BstX2I | RGATCY | 1 cut(s) | 529 |
| BstYI | RGATCY | 1 cut(s) | 529 |
| BtsCI | GGATG | 1 cut(s) | 298 |
| BtsIMutI | CAGTG | 1 cut(s) | 1629 |
| CaiI | CAGNNNCTG | 2 cut(s) | 602, 1730 |
| Cfr13I | GGNCC | 1 cut(s) | 1366 |
| CseI | GACGC | 2 cut(s) | 1296, 1541 |
| Csp6I | GTAC | 2 cut(s) | 740, 981 |
| CviAII | CATG | 2 cut(s) | 944, 1330 |
| CviQI | GTAC | 2 cut(s) | 740, 981 |
| DdeI | CTNAG | 6 cut(s) | 506, 663, 675, 765, 858, 1101 |
| DpnI | GATC | 7 cut(s) | 360, 531, 570, 961, 1142, 1217, 1643 |
| DpnII | GATC | 7 cut(s) | 358, 529, 568, 959, 1140, 1215, 1641 |
| Eam1104I | CTCTTC | 5 cut(s) | 63, 73, 181, 929, 1410 |
| EarI | CTCTTC | 5 cut(s) | 63, 73, 181, 929, 1410 |
| Ecl136II | GAGCTC | 1 cut(s) | 830 |
| Eco130I | CCWWGG | 1 cut(s) | 1202 |
| Eco24I | GRGCYC | 1 cut(s) | 832 |
| Eco31I | GGTCTC | 1 cut(s) | 1505 |
| Eco32I | GATATC | 1 cut(s) | 1777 |
| Eco47I | GGWCC | 1 cut(s) | 1366 |
| Eco53kI | GAGCTC | 1 cut(s) | 830 |
| Eco57I | CTGAAG | 2 cut(s) | 624, 1755 |
| Eco88I | CYCGRG | 1 cut(s) | 1361 |
| EcoICRI | GAGCTC | 1 cut(s) | 830 |
| EcoRI | GAATTC | 1 cut(s) | 1442 |
| EcoRII | CCWGG | 2 cut(s) | 259, 301 |
| EcoRV | GATATC | 1 cut(s) | 1777 |
| EcoT14I | CCWWGG | 1 cut(s) | 1202 |
| EcoT38I | GRGCYC | 1 cut(s) | 832 |
| ErhI | CCWWGG | 1 cut(s) | 1202 |
| Esp3I | CGTCTC | 2 cut(s) | 1314, 1524 |
| FaeI | CATG | 2 cut(s) | 947, 1333 |
| FaqI | GGGAC | 1 cut(s) | 1481 |
| FatI | CATG | 2 cut(s) | 943, 1329 |
| FauI | CCCGC | 2 cut(s) | 1401, 1602 |
| FauNDI | CATATG | 1 cut(s) | 276 |
| FbaI | TGATCA | 1 cut(s) | 568 |
| Fnu4HI | GCNGC | 5 cut(s) | 15, 921, 1388, 1391, 1753 |
| FokI | GGATG | 1 cut(s) | 285 |
| FriOI | GRGCYC | 1 cut(s) | 832 |
| Fsp4HI | GCNGC | 5 cut(s) | 15, 921, 1388, 1391, 1753 |
| FspBI | CTAG | 5 cut(s) | 450, 492, 590, 609, 744 |
| GluI | GCNGC | 5 cut(s) | 15, 921, 1388, 1391, 1753 |
| GsaI | CCCAGC | 1 cut(s) | 933 |
| HapII | CCGG | 3 cut(s) | 972, 1049, 1118 |
| HgaI | GACGC | 2 cut(s) | 1296, 1541 |
| Hin1I | GRCGYC | 1 cut(s) | 1307 |
| Hin1II | CATG | 2 cut(s) | 947, 1333 |
| HindIII | AAGCTT | 2 cut(s) | 38, 677 |
| HpaII | CCGG | 3 cut(s) | 972, 1049, 1118 |
| Hpy166II | GTNNAC | 1 cut(s) | 1237 |
| Hpy188I | TCNGA | 8 cut(s) | 439, 469, 643, 1140, 1448, 1726, 1738, 1774 |
| Hpy188III | TCNNGA | 8 cut(s) | 356, 377, 474, 554, 687, 833, 1556, 1623 |
| Hpy8I | GTNNAC | 1 cut(s) | 1237 |
| HpyCH4III | ACNGT | 6 cut(s) | 538, 577, 616, 1234, 1300, 1633 |
| HpyCH4IV | ACGT | 2 cut(s) | 983, 1058 |
| HpyCH4V | TGCA | 3 cut(s) | 280, 865, 1387 |
| HpyF10VI | GCNNNNNNNGC | 3 cut(s) | 163, 605, 926 |
| HpyF3I | CTNAG | 6 cut(s) | 506, 663, 675, 765, 858, 1101 |
| HpySE526I | ACGT | 2 cut(s) | 983, 1058 |
| Hsp92I | GRCGYC | 1 cut(s) | 1307 |
| Hsp92II | CATG | 2 cut(s) | 947, 1333 |
| Ksp22I | TGATCA | 1 cut(s) | 568 |
| Kzo9I | GATC | 7 cut(s) | 358, 529, 568, 959, 1140, 1215, 1641 |
| LguI | GCTCTTC | 1 cut(s) | 63 |
| LmnI | GCTCC | 4 cut(s) | 1045, 1165, 1192, 1596 |
| Lsp1109I | GCAGC | 3 cut(s) | 26, 907, 1399 |
| LweI | GCATC | 3 cut(s) | 625, 1144, 1283 |
| MaeI | CTAG | 5 cut(s) | 450, 492, 590, 609, 744 |
| MaeII | ACGT | 2 cut(s) | 983, 1058 |
| MaeIII | GTNAC | 5 cut(s) | 760, 777, 1294, 1580, 1761 |
| MalI | GATC | 7 cut(s) | 360, 531, 570, 961, 1142, 1217, 1643 |
| MboI | GATC | 7 cut(s) | 358, 529, 568, 959, 1140, 1215, 1641 |
| MflI | RGATCY | 1 cut(s) | 529 |
| MhlI | GDGCHC | 2 cut(s) | 832, 1606 |
| MluCI | AATT | 7 cut(s) | 220, 386, 886, 1068, 1442, 1663, 1674 |
| MlyI | GAGTC | 3 cut(s) | 1546, 1577, 1613 |
| MmeI | TCCRAC | 2 cut(s) | 557, 937 |
| MseI | TTAA | 9 cut(s) | 42, 443, 824, 845, 882, 897, 990, 1197, 1668 |
| MslI | CAYNNNNRTG | 1 cut(s) | 1242 |
| MspI | CCGG | 3 cut(s) | 972, 1049, 1118 |
| MspR9I | CCNGG | 4 cut(s) | 261, 303, 1050, 1119 |
| Mva1269I | GAATGC | 2 cut(s) | 973, 1351 |
| MvaI | CCWGG | 2 cut(s) | 261, 303 |
| MvnI | CGCG | 2 cut(s) | 1535, 1755 |
| MwoI | GCNNNNNNNGC | 3 cut(s) | 163, 605, 926 |
| NciI | CCSGG | 2 cut(s) | 1050, 1119 |
| NdeI | CATATG | 1 cut(s) | 276 |
| NdeII | GATC | 7 cut(s) | 358, 529, 568, 959, 1140, 1215, 1641 |
| NlaIII | CATG | 2 cut(s) | 947, 1333 |
| NlaIV | GGNNCC | 1 cut(s) | 1459 |
| NmuCI | GTSAC | 4 cut(s) | 760, 1294, 1580, 1761 |
| NspV | TTCGAA | 1 cut(s) | 8 |
| OliI | CACNNNNGTG | 1 cut(s) | 1242 |
| PaeR7I | CTCGAG | 1 cut(s) | 1361 |
| PciSI | GCTCTTC | 1 cut(s) | 63 |
| PcsI | WCGNNNNNNNCGW | 1 cut(s) | 1154 |
| PctI | GAATGC | 2 cut(s) | 973, 1351 |
| PfeI | GAWTC | 8 cut(s) | 349, 395, 470, 544, 1129, 1283, 1626, 1727 |
| PflMI | CCANNNNNTGG | 1 cut(s) | 266 |
| PkrI | GCNGC | 5 cut(s) | 16, 922, 1389, 1392, 1754 |
| PleI | GAGTC | 3 cut(s) | 1546, 1577, 1613 |
| PpsI | GAGTC | 3 cut(s) | 1546, 1577, 1613 |
| PshBI | ATTAAT | 1 cut(s) | 990 |
| Psp124BI | GAGCTC | 1 cut(s) | 832 |
| Psp6I | CCWGG | 2 cut(s) | 259, 301 |
| PspFI | CCCAGC | 1 cut(s) | 929 |
| PspGI | CCWGG | 2 cut(s) | 259, 301 |
| PspN4I | GGNNCC | 1 cut(s) | 1459 |
| PspPI | GGNCC | 1 cut(s) | 1366 |
| PspXI | VCTCGAGB | 1 cut(s) | 1361 |
| PstNI | CAGNNNCTG | 2 cut(s) | 602, 1730 |
| PsuI | RGATCY | 1 cut(s) | 529 |
| RsaI | GTAC | 2 cut(s) | 741, 982 |
| RsaNI | GTAC | 2 cut(s) | 740, 981 |
| RseI | CAYNNNNRTG | 1 cut(s) | 1242 |
| SacI | GAGCTC | 1 cut(s) | 832 |
| SapI | GCTCTTC | 1 cut(s) | 63 |
| SaqAI | TTAA | 9 cut(s) | 42, 443, 824, 845, 882, 897, 990, 1197, 1668 |
| SatI | GCNGC | 5 cut(s) | 15, 921, 1388, 1391, 1753 |
| Sau3AI | GATC | 7 cut(s) | 358, 529, 568, 959, 1140, 1215, 1641 |
| Sau96I | GGNCC | 1 cut(s) | 1366 |
| SchI | GAGTC | 3 cut(s) | 1546, 1577, 1613 |
| ScrFI | CCNGG | 4 cut(s) | 261, 303, 1050, 1119 |
| SduI | GDGCHC | 2 cut(s) | 832, 1606 |
| SfaNI | GCATC | 3 cut(s) | 625, 1144, 1283 |
| Sfr274I | CTCGAG | 1 cut(s) | 1361 |
| SfuI | TTCGAA | 1 cut(s) | 8 |
| SinI | GGWCC | 1 cut(s) | 1366 |
| SlaI | CTCGAG | 1 cut(s) | 1361 |
| SmiMI | CAYNNNNRTG | 1 cut(s) | 1242 |
| SmlI | CTYRAG | 2 cut(s) | 375, 1361 |
| SmoI | CTYRAG | 2 cut(s) | 375, 1361 |
| Sse9I | AATT | 7 cut(s) | 220, 386, 886, 1068, 1442, 1663, 1674 |
| SsiI | CCGC | 7 cut(s) | 155, 203, 1133, 1391, 1408, 1595, 1753 |
| SspMI | CTAG | 5 cut(s) | 450, 492, 590, 609, 744 |
| SstI | GAGCTC | 1 cut(s) | 832 |
| StyD4I | CCNGG | 4 cut(s) | 259, 301, 1048, 1117 |
| StyI | CCWWGG | 1 cut(s) | 1202 |
| TaaI | ACNGT | 6 cut(s) | 538, 577, 616, 1234, 1300, 1633 |
| TaiI | ACGT | 2 cut(s) | 986, 1061 |
| TaqI | TCGA | 5 cut(s) | 8, 648, 686, 1362, 1381 |
| TasI | AATT | 7 cut(s) | 220, 386, 886, 1068, 1442, 1663, 1674 |
| TauI | GCSGC | 2 cut(s) | 1393, 1755 |
| TfiI | GAWTC | 8 cut(s) | 349, 395, 470, 544, 1129, 1283, 1626, 1727 |
| Tru1I | TTAA | 9 cut(s) | 42, 443, 824, 845, 882, 897, 990, 1197, 1668 |
| Tru9I | TTAA | 9 cut(s) | 42, 443, 824, 845, 882, 897, 990, 1197, 1668 |
| TscAI | CASTG | 1 cut(s) | 1636 |
| TseFI | GTSAC | 4 cut(s) | 760, 1294, 1580, 1761 |
| TseI | GCWGC | 3 cut(s) | 14, 920, 1387 |
| Tsp45I | GTSAC | 4 cut(s) | 760, 1294, 1580, 1761 |
| TspDTI | ATGAA | 8 cut(s) | 18, 50, 105, 263, 301, 474, 1169, 1284 |
| TspGWI | ACGGA | 2 cut(s) | 241, 1049 |
| TspRI | CASTG | 1 cut(s) | 1636 |
| Van91I | CCANNNNNTGG | 1 cut(s) | 266 |
| VpaK11BI | GGWCC | 1 cut(s) | 1366 |
| VspI | ATTAAT | 1 cut(s) | 990 |
| XapI | RAATTY | 4 cut(s) | 386, 1442, 1663, 1674 |
| XhoI | CTCGAG | 1 cut(s) | 1361 |
| XspI | CTAG | 5 cut(s) | 450, 492, 590, 609, 744 |