AT4G19045

mob1 phocein family protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
arabidopsis_thaliana
4
OG0016549
Physical Location & Seq
Reverse (-)
10438024 .. 10439900
1877 bp
Loading structure...
UTR
Exon/CDS
Intron
AT4G19045.1

Sequence Viewer

Length: 648 bp
ATGAGTCTATTCGGGCTTGGAAGAAATCAAAAGACTTTCCGTCCTAAGAAGAGCGCACCATCAGGAACCAAGGGAGCAGAGCTTCGAAAGCATATAGATGCAACTTTAGGTAGTGGTAATCTTAGAGAAGCCGTCAAACTTCCTCCGGGAGAGGATTTAAACGAATGGCTTGCAGTTAACACTGTGGATTTCTTCAATCAGGTGAATCTGTTATTTGGTACACTTACCGAGTTTTGCACCCCGGAGAACTGTTCTACAATGACTGCTGGTCCCAAGTACGAATACAGATGGGCCGATGGTGTACAAATCAAGAAGCCTATTGAGGTTTCAGCTCCAAAGTATGTTGAATACTTGATGGATTGGATCGAGACACAACTCGATGATGAGACCATATTTCCTCAAAAACTTGGTGCAGCTTTTCCTCCAAACTTCAAGGAAGTGGTGAAGACAATCTTTAAACGACTATTCCGAGTTTACGCACACATATACCACTCTCATTTCCAGAAAATAGTTAGTCTCAAAGAGGAAGCTCATCTCAACACTTGCTTCAAACACTTCATCCTCTTCACTCATGAGTTTGTTCTCATTGACAAGAAAGAACTCGCTCCTCTTCAAGAACTCATAGAATCTATCATTGCACCTTACTAA

Protein Analysis

215

Amino Acids

24.67

Weight (kDa)

7.06

Isoelectric Point (pI)

34.73

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Mob1_phocein PF03637 34 - 204 1.6e-81 Mob1/phocein family
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Orthologous Genes (Group: OG0016549)

Species Orthologous Gene IDs
arabidopsis_thaliana AT4G19045
fragaria_vesca FvH4_5g23830 FvH4_5g23830
malus_domestica MD00G1000800.v1.1 MD06G1014300.v1.1
prunus_persica Prupe.5G022100_v2.0.a1 Prupe.5G022100_v2.0.a1
rosa_chinensis RchiOBHm_Chr7g0213221
rosa_laevigata RLG00000002821
rosa_multiflora Rmu_ssc0000084.1_g000016
rosa_rugosa Rorug07G0140400 Rorug07G0140400
rosa_samantha Rh7DG280100
rosa_wichuraiana Rw7G023610

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AclWI GGATC 1 cut(s) 371
AfaI GTAC 3 cut(s) 220, 278, 303
AgsI TTSAA 5 cut(s) 196, 347, 433, 550, 614
AhdI GACNNNNNGTC 2 cut(s) 39, 267
AluBI AGCT 4 cut(s) 82, 332, 416, 530
AluI AGCT 4 cut(s) 82, 332, 416, 530
Alw26I GTCTC 3 cut(s) 362, 380, 521
AlwI GGATC 1 cut(s) 371
AoxI GGCC 1 cut(s) 291
ApeKI GCWGC 1 cut(s) 413
AspLEI GCGC 1 cut(s) 56
AspS9I GGNCC 2 cut(s) 269, 291
AsuC2I CCSGG 2 cut(s) 147, 242
AsuHPI GGTGA 2 cut(s) 214, 454
AsuII TTCGAA 1 cut(s) 85
AvaII GGWCC 1 cut(s) 269
BbsI GAAGAC 1 cut(s) 452
BbvI GCAGC 1 cut(s) 425
BccI CCATC 4 cut(s) 67, 282, 290, 349
BceAI ACGGC 1 cut(s) 116
BcgI CGANNNNNNTGC 2 cut(s) 152, 186
BcnI CCSGG 2 cut(s) 147, 242
BcoDI GTCTC 3 cut(s) 362, 380, 521
BisI GCNGC 1 cut(s) 414
BlsI GCNGC 1 cut(s) 415
Bme1390I CCNGG 2 cut(s) 147, 242
Bme18I GGWCC 1 cut(s) 269
BmeRI GACNNNNNGTC 2 cut(s) 39, 267
BmgT120I GGNCC 2 cut(s) 269, 291
BmiI GGNNCC 2 cut(s) 67, 271
BmrFI CCNGG 2 cut(s) 147, 242
BmsI GCATC 1 cut(s) 88
BpiI GAAGAC 1 cut(s) 452
Bpu14I TTCGAA 1 cut(s) 85
BpuMI CCSGG 2 cut(s) 147, 242
BsaI GGTCTC 1 cut(s) 380
BsaJI CCNNGG 2 cut(s) 69, 240
Bse3DI GCAATG 1 cut(s) 633
BseDI CCNNGG 2 cut(s) 69, 240
BseGI GGATG 1 cut(s) 558
BseMI GCAATG 1 cut(s) 633
BseRI GAGGAG 1 cut(s) 597
BseXI GCAGC 1 cut(s) 425
BsgI GTGCAG 1 cut(s) 432
BshFI GGCC 1 cut(s) 293
BsiSI CCGG 2 cut(s) 146, 242
BslFI GGGAC 1 cut(s) 255
BsmAI GTCTC 3 cut(s) 362, 380, 521
BsmFI GGGAC 1 cut(s) 255
BsnI GGCC 1 cut(s) 293
Bso31I GGTCTC 1 cut(s) 380
Bsp119I TTCGAA 1 cut(s) 85
Bsp1407I TGTACA 1 cut(s) 301
Bsp143I GATC 1 cut(s) 363
BspANI GGCC 1 cut(s) 293
BspHI TCATGA 1 cut(s) 571
BspLI GGNNCC 2 cut(s) 67, 271
BspPI GGATC 1 cut(s) 371
BspQI GCTCTTC 1 cut(s) 44
BspT104I TTCGAA 1 cut(s) 85
BspTNI GGTCTC 1 cut(s) 380
BsrDI GCAATG 1 cut(s) 633
BsrGI TGTACA 1 cut(s) 301
BssECI CCNNGG 2 cut(s) 69, 240
BssMI GATC 1 cut(s) 363
BssT1I CCWWGG 1 cut(s) 69
Bst4CI ACNGT 2 cut(s) 184, 251
Bst6I CTCTTC 3 cut(s) 44, 569, 615
BstAUI TGTACA 1 cut(s) 301
BstBI TTCGAA 1 cut(s) 85
BstC8I GCNNGC 1 cut(s) 171
BstDEI CTNAG 2 cut(s) 45, 122
BstF5I GGATG 1 cut(s) 558
BstHHI GCGC 1 cut(s) 56
BstKTI GATC 1 cut(s) 366
BstMAI GTCTC 3 cut(s) 362, 380, 521
BstMBI GATC 1 cut(s) 363
BstMWI GCNNNNNNNGC 1 cut(s) 88
BstSCI CCNGG 2 cut(s) 145, 240
BstV1I GCAGC 1 cut(s) 425
BstV2I GAAGAC 1 cut(s) 452
BsuRI GGCC 1 cut(s) 293
BtsCI GGATG 1 cut(s) 558
BtsIMutI CAGTG 1 cut(s) 180
Cac8I GCNNGC 1 cut(s) 171
CciI TCATGA 1 cut(s) 571
CfoI GCGC 1 cut(s) 56
Cfr13I GGNCC 2 cut(s) 269, 291
Csp6I GTAC 3 cut(s) 219, 277, 302
CviAII CATG 1 cut(s) 572
CviJI RGCY 9 cut(s) 16, 82, 131, 169, 293, 316, 332, 416, 530
CviKI_1 RGCY 9 cut(s) 16, 82, 131, 169, 293, 316, 332, 416, 530
CviQI GTAC 3 cut(s) 219, 277, 302
DdeI CTNAG 2 cut(s) 45, 122
DpnI GATC 1 cut(s) 365
DpnII GATC 1 cut(s) 363
DraI TTTAAA 2 cut(s) 159, 457
DriI GACNNNNNGTC 2 cut(s) 39, 267
Eam1104I CTCTTC 3 cut(s) 44, 569, 615
Eam1105I GACNNNNNGTC 2 cut(s) 39, 267
EarI CTCTTC 3 cut(s) 44, 569, 615
Eco130I CCWWGG 1 cut(s) 69
Eco31I GGTCTC 1 cut(s) 380
Eco47I GGWCC 1 cut(s) 269
EcoT14I CCWWGG 1 cut(s) 69
ErhI CCWWGG 1 cut(s) 69
FaeI CATG 1 cut(s) 575
FaiI YATR 8 cut(s) 93, 95, 342, 392, 485, 487, 573, 623
FalI AAGNNNNNCTT 2 cut(s) 437, 469
FaqI GGGAC 1 cut(s) 255
FatI CATG 1 cut(s) 571
Fnu4HI GCNGC 1 cut(s) 414
FokI GGATG 1 cut(s) 545
Fsp4HI GCNGC 1 cut(s) 414
GlaI GCGC 1 cut(s) 55
GluI GCNGC 1 cut(s) 414
HaeIII GGCC 1 cut(s) 293
HapII CCGG 2 cut(s) 146, 242
HhaI GCGC 1 cut(s) 56
Hin1II CATG 1 cut(s) 575
Hin6I GCGC 1 cut(s) 54
HinP1I GCGC 1 cut(s) 54
HincII GTYRAC 1 cut(s) 178
HindII GTYRAC 1 cut(s) 178
HinfI GANTC 3 cut(s) 4, 205, 626
HpaI GTTAAC 1 cut(s) 178
HpaII CCGG 2 cut(s) 146, 242
HphI GGTGA 2 cut(s) 214, 454
Hpy166II GTNNAC 4 cut(s) 178, 221, 302, 475
Hpy188I TCNGA 1 cut(s) 470
Hpy188III TCNNGA 6 cut(s) 63, 310, 367, 502, 572, 614
Hpy8I GTNNAC 4 cut(s) 178, 221, 302, 475
HpyCH4III ACNGT 2 cut(s) 184, 251
HpyCH4V TGCA 5 cut(s) 101, 173, 237, 413, 638
HpyF10VI GCNNNNNNNGC 1 cut(s) 88
HpyF3I CTNAG 2 cut(s) 45, 122
Hsp92II CATG 1 cut(s) 575
HspAI GCGC 1 cut(s) 54
KspAI GTTAAC 1 cut(s) 178
Kzo9I GATC 1 cut(s) 363
LguI GCTCTTC 1 cut(s) 44
LmnI GCTCC 3 cut(s) 74, 337, 610
LpnPI CCDG 6 cut(s) 48, 159, 185, 252, 255, 515
Lsp1109I GCAGC 1 cut(s) 425
LweI GCATC 1 cut(s) 88
MalI GATC 1 cut(s) 365
MboI GATC 1 cut(s) 363
MboII GAAGA 6 cut(s) 33, 61, 184, 457, 556, 602
MlyI GAGTC 1 cut(s) 13
MnlI CCTC 8 cut(s) 145, 153, 316, 408, 432, 517, 572, 618
MseI TTAA 3 cut(s) 158, 177, 456
MslI CAYNNNNRTG 1 cut(s) 96
MspI CCGG 2 cut(s) 146, 242
MspR9I CCNGG 2 cut(s) 147, 242
MwoI GCNNNNNNNGC 1 cut(s) 88
NciI CCSGG 2 cut(s) 147, 242
NdeII GATC 1 cut(s) 363
NlaIII CATG 1 cut(s) 575
NlaIV GGNNCC 2 cut(s) 67, 271
NspV TTCGAA 1 cut(s) 85
PagI TCATGA 1 cut(s) 571
PciSI GCTCTTC 1 cut(s) 44
PcsI WCGNNNNNNNCGW 1 cut(s) 466
PfeI GAWTC 2 cut(s) 205, 626
PfoI TCCNGGA 1 cut(s) 145
PkrI GCNGC 1 cut(s) 415
PleI GAGTC 1 cut(s) 12
PpsI GAGTC 1 cut(s) 12
PspN4I GGNNCC 2 cut(s) 67, 271
PspPI GGNCC 2 cut(s) 269, 291
RsaI GTAC 3 cut(s) 220, 278, 303
RsaNI GTAC 3 cut(s) 219, 277, 302
RseI CAYNNNNRTG 1 cut(s) 96
SapI GCTCTTC 1 cut(s) 44
SaqAI TTAA 3 cut(s) 158, 177, 456
SatI GCNGC 1 cut(s) 414
Sau3AI GATC 1 cut(s) 363
Sau96I GGNCC 2 cut(s) 269, 291
SchI GAGTC 1 cut(s) 13
ScrFI CCNGG 2 cut(s) 147, 242
SetI ASST 8 cut(s) 84, 112, 204, 327, 334, 418, 532, 643
SfaNI GCATC 1 cut(s) 88
SfuI TTCGAA 1 cut(s) 85
SinI GGWCC 1 cut(s) 269
SmiMI CAYNNNNRTG 1 cut(s) 96
StyD4I CCNGG 2 cut(s) 145, 240
StyI CCWWGG 1 cut(s) 69
TaaI ACNGT 2 cut(s) 184, 251
TaqI TCGA 3 cut(s) 85, 366, 378
TatI WGTACW 1 cut(s) 301
TfiI GAWTC 2 cut(s) 205, 626
Tru1I TTAA 3 cut(s) 158, 177, 456
Tru9I TTAA 3 cut(s) 158, 177, 456
TscAI CASTG 1 cut(s) 187
TseI GCWGC 1 cut(s) 413
TspDTI ATGAA 1 cut(s) 547
TspGWI ACGGA 1 cut(s) 29
TspRI CASTG 1 cut(s) 187
VpaK11BI GGWCC 1 cut(s) 269
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.