MD00G1000800.v1.1

MOB kinase activator-like

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
malus_domestica
Chr00
OG0016549
Physical Location & Seq
Reverse (-)
171011 .. 177168
6158 bp
Loading structure...
UTR
Exon/CDS
Intron
MD00G1000800.v1.1.491

Sequence Viewer

Length: 648 bp
ATGAGTCTCTTCGGTCTGGGCAGAAACCAGAGGACATTCCGCCCGAAAAAAAGTGCACCTTCAGGGAGCAAGGGTGCTCAGCTTAGAAAGCATATTGATGCTACACTTGGTAGCGGCAACCTAAGAGAGGCAGTAAAACTTCCAACTGGAGAAGATTTAAATGAATGGCTTGCTGTCAACACTGTGGATTTCTTCAATCAGGTCAACTTGTTGTATGGTACCCTCACAGAGTTCTGTACTCCAGAGAATTGTCCTACAATGACTGCAGGCCCCAAGTATGAGTATAGGTGGGCCGATGGTGTACTAATTAAGAAACCTATTGAGGTTTCGGCTCCAAAATATGTTGAATATCTAATGGACTGGATTGAATCTCAACTTGATGATGAATCCATATTTCCCCAAAAGCTTGGTGCACCATTTCCCCCCAATTTCAGGGAGGTTGTGAAGACGATATTCAAAAGATTGTTCCGTGTATATGCCCACATATATCACTCTCATTTCCAGAAAATTGTGAGCCTTAAGGAGGAGGCCCATTTAAATACTTGCTTCAAGCATTTCATACTATTTACCTGTGAATTCGTGCTAATTGACAAGAAGGAGCTAGCTCCGCTGCAAGAGCTTATAGAATCCATCGTTGTTCCTTATTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
ko04111 ko04390 ko04391 ko04392 map04111 map04390 map04391 map04392
Pfam Domains
Protein Families
Mob1_phocein

Protein Analysis

216

Amino Acids

24.7

Weight (kDa)

7.68

Isoelectric Point (pI)

39.47

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Mob1_phocein PF03637 34 - 204 2.3e-82 Mob1/phocein family
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0016549)

Species Orthologous Gene IDs
arabidopsis_thaliana AT4G19045
fragaria_vesca FvH4_5g23830 FvH4_5g23830
malus_domestica MD00G1000800.v1.1 MD06G1014300.v1.1
prunus_persica Prupe.5G022100_v2.0.a1 Prupe.5G022100_v2.0.a1
rosa_chinensis RchiOBHm_Chr7g0213221
rosa_laevigata RLG00000002821
rosa_multiflora Rmu_ssc0000084.1_g000016
rosa_rugosa Rorug07G0140400 Rorug07G0140400
rosa_samantha Rh7DG280100
rosa_wichuraiana Rw7G023610

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc65I GGTACC 1 cut(s) 218
AccB1I GGYRCC 1 cut(s) 218
AciI CCGC 3 cut(s) 40, 114, 608
AcsI RAATTY 1 cut(s) 575
AcuI CTGAAG 1 cut(s) 45
AfaI GTAC 3 cut(s) 220, 238, 303
AfiI CCNNNNNNNGG 3 cut(s) 127, 432, 523
AflII CTTAAG 1 cut(s) 518
AgsI TTSAA 5 cut(s) 196, 347, 368, 457, 550
AluBI AGCT 5 cut(s) 82, 406, 601, 605, 619
AluI AGCT 5 cut(s) 82, 406, 601, 605, 619
Alw21I GWGCWC 3 cut(s) 58, 79, 415
Alw26I GTCTC 1 cut(s) 11
Alw44I GTGCAC 2 cut(s) 54, 411
AoxI GGCC 3 cut(s) 268, 291, 528
ApaLI GTGCAC 2 cut(s) 54, 411
ApeKI GCWGC 1 cut(s) 610
ApoI RAATTY 1 cut(s) 575
Asp718I GGTACC 1 cut(s) 218
AspS9I GGNCC 3 cut(s) 269, 291, 529
AsuNHI GCTAGC 1 cut(s) 601
BaeGI GKGCMC 2 cut(s) 58, 415
BanI GGYRCC 1 cut(s) 218
BbsI GAAGAC 1 cut(s) 452
Bbv12I GWGCWC 3 cut(s) 58, 79, 415
BbvI GCAGC 1 cut(s) 597
BccI CCATC 2 cut(s) 290, 638
BcoDI GTCTC 1 cut(s) 11
BfaI CTAG 1 cut(s) 602
BfmI CTRYAG 1 cut(s) 264
BfrI CTTAAG 1 cut(s) 518
BisI GCNGC 2 cut(s) 115, 611
BlpI GCTNAGC 1 cut(s) 78
BlsI GCNGC 2 cut(s) 116, 612
BmgT120I GGNCC 3 cut(s) 269, 291, 529
BmiI GGNNCC 3 cut(s) 220, 271, 333
BmsI GCATC 1 cut(s) 88
BmtI GCTAGC 1 cut(s) 605
BpiI GAAGAC 1 cut(s) 452
BpmI CTGGAG 2 cut(s) 168, 225
Bpu1102I GCTNAGC 1 cut(s) 78
BsaXI ACNNNNNCTCC 2 cut(s) 58, 88
Bsc4I CCNNNNNNNGG 3 cut(s) 127, 432, 523
Bse1I ACTGG 2 cut(s) 151, 365
BseLI CCNNNNNNNGG 3 cut(s) 127, 432, 523
BseMII CTCAG 1 cut(s) 92
BseNI ACTGG 2 cut(s) 151, 365
BseRI GAGGAG 1 cut(s) 539
BseSI GKGCMC 2 cut(s) 58, 415
BseXI GCAGC 1 cut(s) 597
BshFI GGCC 3 cut(s) 270, 293, 530
BshNI GGYRCC 1 cut(s) 218
BsiHKAI GWGCWC 3 cut(s) 58, 79, 415
BslI CCNNNNNNNGG 3 cut(s) 127, 432, 523
BsmAI GTCTC 1 cut(s) 11
BsnI GGCC 3 cut(s) 270, 293, 530
Bsp1286I GDGCHC 3 cut(s) 58, 79, 415
Bsp1720I GCTNAGC 1 cut(s) 78
BspACI CCGC 3 cut(s) 40, 114, 608
BspANI GGCC 3 cut(s) 270, 293, 530
BspCNI CTCAG 1 cut(s) 91
BspLI GGNNCC 3 cut(s) 220, 271, 333
BspMAI CTGCAG 1 cut(s) 268
BspOI GCTAGC 1 cut(s) 605
BspT107I GGYRCC 1 cut(s) 218
BspTI CTTAAG 1 cut(s) 518
BsrI ACTGG 2 cut(s) 151, 365
Bst4CI ACNGT 1 cut(s) 184
Bst6I CTCTTC 1 cut(s) 14
BstAFI CTTAAG 1 cut(s) 518
BstC8I GCNNGC 3 cut(s) 171, 268, 603
BstDEI CTNAG 3 cut(s) 78, 83, 122
BstENI CCTNNNNNAGG 2 cut(s) 125, 521
BstMAI GTCTC 1 cut(s) 11
BstMWI GCNNNNNNNGC 3 cut(s) 88, 607, 616
BstSFI CTRYAG 1 cut(s) 264
BstSLI GKGCMC 2 cut(s) 58, 415
BstV1I GCAGC 1 cut(s) 597
BstV2I GAAGAC 1 cut(s) 452
BstXI CCANNNNNNTGG 1 cut(s) 407
BsuRI GGCC 3 cut(s) 270, 293, 530
BtsIMutI CAGTG 1 cut(s) 180
Cac8I GCNNGC 3 cut(s) 171, 268, 603
Cfr13I GGNCC 3 cut(s) 269, 291, 529
Csp6I GTAC 3 cut(s) 219, 237, 302
CviQI GTAC 3 cut(s) 219, 237, 302
DdeI CTNAG 3 cut(s) 78, 83, 122
DraI TTTAAA 2 cut(s) 159, 537
Eam1104I CTCTTC 1 cut(s) 14
EarI CTCTTC 1 cut(s) 14
EciI GGCGGA 1 cut(s) 29
Eco57I CTGAAG 1 cut(s) 45
EcoNI CCTNNNNNAGG 2 cut(s) 125, 521
EcoO109I RGGNCCY 1 cut(s) 269
EcoRI GAATTC 1 cut(s) 575
FalI AAGNNNNNCTT 2 cut(s) 43, 75
Fnu4HI GCNGC 2 cut(s) 115, 611
Fsp4HI GCNGC 2 cut(s) 115, 611
FspBI CTAG 1 cut(s) 602
GluI GCNGC 2 cut(s) 115, 611
GsuI CTGGAG 2 cut(s) 168, 225
HaeIII GGCC 3 cut(s) 270, 293, 530
HincII GTYRAC 2 cut(s) 178, 205
HindII GTYRAC 2 cut(s) 178, 205
HindIII AAGCTT 1 cut(s) 404
HinfI GANTC 4 cut(s) 4, 368, 386, 626
Hpy166II GTNNAC 5 cut(s) 56, 178, 205, 302, 413
Hpy188III TCNNGA 2 cut(s) 242, 502
Hpy8I GTNNAC 5 cut(s) 56, 178, 205, 302, 413
HpyAV CCTTC 2 cut(s) 69, 589
HpyCH4III ACNGT 1 cut(s) 184
HpyCH4V TGCA 4 cut(s) 56, 266, 413, 613
HpyF10VI GCNNNNNNNGC 3 cut(s) 88, 607, 616
HpyF3I CTNAG 3 cut(s) 78, 83, 122
KpnI GGTACC 1 cut(s) 222
LmnI GCTCC 4 cut(s) 66, 337, 598, 610
Lsp1109I GCAGC 1 cut(s) 597
LweI GCATC 1 cut(s) 88
MaeI CTAG 1 cut(s) 602
MboII GAAGA 3 cut(s) 164, 184, 457
MhlI GDGCHC 3 cut(s) 58, 79, 415
MluCI AATT 6 cut(s) 247, 306, 427, 507, 575, 585
MlyI GAGTC 1 cut(s) 13
MmeI TCCRAC 1 cut(s) 167
MnlI CCTC 7 cut(s) 24, 121, 233, 316, 430, 517, 520
MseI TTAA 4 cut(s) 158, 309, 519, 536
MslI CAYNNNNRTG 1 cut(s) 96
MspA1I CMGCKG 1 cut(s) 610
MspCI CTTAAG 1 cut(s) 518
MwoI GCNNNNNNNGC 3 cut(s) 88, 607, 616
NheI GCTAGC 1 cut(s) 601
NlaIV GGNNCC 3 cut(s) 220, 271, 333
PfeI GAWTC 3 cut(s) 368, 386, 626
PkrI GCNGC 2 cut(s) 116, 612
PleI GAGTC 1 cut(s) 12
PpsI GAGTC 1 cut(s) 12
PspN4I GGNNCC 3 cut(s) 220, 271, 333
PspPI GGNCC 3 cut(s) 269, 291, 529
PstI CTGCAG 1 cut(s) 268
RsaI GTAC 3 cut(s) 220, 238, 303
RsaNI GTAC 3 cut(s) 219, 237, 302
RseI CAYNNNNRTG 1 cut(s) 96
SaqAI TTAA 4 cut(s) 158, 309, 519, 536
SatI GCNGC 2 cut(s) 115, 611
Sau96I GGNCC 3 cut(s) 269, 291, 529
SchI GAGTC 1 cut(s) 13
SduI GDGCHC 3 cut(s) 58, 79, 415
SfaNI GCATC 1 cut(s) 88
SfcI CTRYAG 1 cut(s) 264
SmiI ATTTAAAT 2 cut(s) 159, 537
SmiMI CAYNNNNRTG 1 cut(s) 96
SmlI CTYRAG 1 cut(s) 518
SmoI CTYRAG 1 cut(s) 518
Sse9I AATT 6 cut(s) 247, 306, 427, 507, 575, 585
SsiI CCGC 3 cut(s) 40, 114, 608
SspMI CTAG 1 cut(s) 602
SwaI ATTTAAAT 2 cut(s) 159, 537
TaaI ACNGT 1 cut(s) 184
TasI AATT 6 cut(s) 247, 306, 427, 507, 575, 585
TatI WGTACW 2 cut(s) 236, 301
TauI GCSGC 1 cut(s) 117
TfiI GAWTC 3 cut(s) 368, 386, 626
Tru1I TTAA 4 cut(s) 158, 309, 519, 536
Tru9I TTAA 4 cut(s) 158, 309, 519, 536
TscAI CASTG 1 cut(s) 187
TseI GCWGC 1 cut(s) 610
TspDTI ATGAA 3 cut(s) 177, 399, 547
TspGWI ACGGA 1 cut(s) 458
TspRI CASTG 1 cut(s) 187
Vha464I CTTAAG 1 cut(s) 518
VneI GTGCAC 2 cut(s) 54, 411
XagI CCTNNNNNAGG 2 cut(s) 125, 521
XapI RAATTY 1 cut(s) 575
XspI CTAG 1 cut(s) 602
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.