MD06G1014300.v1.1

MOB kinase activator-like

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
malus_domestica
Chr06
OG0016549
Physical Location & Seq
Reverse (-)
1807691 .. 1814526
6836 bp
Loading structure...
UTR
Exon/CDS
Intron
MD06G1014300.v1.1.491

Sequence Viewer

Length: 654 bp
ATGAGTCTCTTCGGTCTGGGCAGAGGAAAAAACCAGAGGACGTTCCGCCCGAAAAAAAGCGCACCTTCAGGGAGTAAGGGTGCTCAGCTTAGAAAGCATATTGATGCTACACTTGGTAGTGGCAACCTAAGAGAGGCAGTAAAACTTCCAACTGGAGAAGATTTAAATGAATGGCTTGCTGTTAACACTGTGGATTTCTTCAATCAGGTCAACTTGTTATACGGTACCCTCACAGAGTTCTGTACTCCAGAGAATTGTCCTACAATGACTGCAGGCCCCAAGTATGAGTATAGGTGGGCAGATGGTGTACAGATTAAGAAACCGATTGAGGTTTCAGCTCCAAAATATGTTGAATATCTAATGGACTGGATTGAATCTCAACTTGATGATGAATCCATATTTCCCCAAAAGCTTGGTGCACCATTTCCCCCCAATTTCAGGGAGGTTGTGAAGACGATATTCAAAAGACTGTTCCGTGTATATGCCCACATATATCACTCTCATTTCCAGAAAATTGTGAGCCTTAAGGAGGAGGCCCATTTAAATACTTGCTTCAAGCATTTCATACTATTTACCTGCGAATTTGTGCTAATTGACAAGAAGGAGCTAGCTCCACTTCAAGAGCTTATAGAATCCATCATTGTTCCTTATTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
ko04111 ko04390 ko04391 ko04392 map04111 map04390 map04391 map04392
Pfam Domains
Protein Families
Mob1_phocein

Protein Analysis

218

Amino Acids

24.92

Weight (kDa)

8.26

Isoelectric Point (pI)

37.84

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Mob1_phocein PF03637 36 - 206 1.5e-82 Mob1/phocein family
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0016549)

Species Orthologous Gene IDs
arabidopsis_thaliana AT4G19045
fragaria_vesca FvH4_5g23830 FvH4_5g23830
malus_domestica MD00G1000800.v1.1 MD06G1014300.v1.1
prunus_persica Prupe.5G022100_v2.0.a1 Prupe.5G022100_v2.0.a1
rosa_chinensis RchiOBHm_Chr7g0213221
rosa_laevigata RLG00000002821
rosa_multiflora Rmu_ssc0000084.1_g000016
rosa_rugosa Rorug07G0140400 Rorug07G0140400
rosa_samantha Rh7DG280100
rosa_wichuraiana Rw7G023610

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc36I ACCTGC 1 cut(s) 584
Acc65I GGTACC 1 cut(s) 224
AccB1I GGYRCC 1 cut(s) 224
AciI CCGC 1 cut(s) 46
AcsI RAATTY 1 cut(s) 581
AcuI CTGAAG 1 cut(s) 51
AfaI GTAC 3 cut(s) 226, 244, 309
AfiI CCNNNNNNNGG 3 cut(s) 133, 438, 529
AflII CTTAAG 1 cut(s) 524
AgsI TTSAA 6 cut(s) 202, 353, 374, 463, 556, 620
AluBI AGCT 6 cut(s) 88, 338, 412, 607, 611, 625
AluI AGCT 6 cut(s) 88, 338, 412, 607, 611, 625
Alw21I GWGCWC 2 cut(s) 85, 421
Alw26I GTCTC 1 cut(s) 11
Alw44I GTGCAC 1 cut(s) 417
AoxI GGCC 2 cut(s) 274, 534
ApaLI GTGCAC 1 cut(s) 417
ApoI RAATTY 1 cut(s) 581
Asp718I GGTACC 1 cut(s) 224
AspLEI GCGC 1 cut(s) 62
AspS9I GGNCC 2 cut(s) 275, 535
AsuNHI GCTAGC 1 cut(s) 607
BaeGI GKGCMC 1 cut(s) 421
BanI GGYRCC 1 cut(s) 224
BbsI GAAGAC 1 cut(s) 458
Bbv12I GWGCWC 2 cut(s) 85, 421
BccI CCATC 2 cut(s) 296, 644
BcoDI GTCTC 1 cut(s) 11
BfaI CTAG 1 cut(s) 608
BfmI CTRYAG 1 cut(s) 270
BfrI CTTAAG 1 cut(s) 524
BfuAI ACCTGC 1 cut(s) 584
BlpI GCTNAGC 1 cut(s) 84
BmgT120I GGNCC 2 cut(s) 275, 535
BmiI GGNNCC 2 cut(s) 226, 277
BmsI GCATC 1 cut(s) 94
BmtI GCTAGC 1 cut(s) 611
BpiI GAAGAC 1 cut(s) 458
BpmI CTGGAG 2 cut(s) 174, 231
Bpu1102I GCTNAGC 1 cut(s) 84
BsaXI ACNNNNNCTCC 2 cut(s) 64, 94
Bsc4I CCNNNNNNNGG 3 cut(s) 133, 438, 529
Bse1I ACTGG 2 cut(s) 157, 371
BseLI CCNNNNNNNGG 3 cut(s) 133, 438, 529
BseMII CTCAG 1 cut(s) 98
BseNI ACTGG 2 cut(s) 157, 371
BseRI GAGGAG 1 cut(s) 545
BseSI GKGCMC 1 cut(s) 421
BshFI GGCC 2 cut(s) 276, 536
BshNI GGYRCC 1 cut(s) 224
BsiHKAI GWGCWC 2 cut(s) 85, 421
BslI CCNNNNNNNGG 3 cut(s) 133, 438, 529
BsmAI GTCTC 1 cut(s) 11
BsnI GGCC 2 cut(s) 276, 536
Bsp1286I GDGCHC 2 cut(s) 85, 421
Bsp1407I TGTACA 1 cut(s) 307
Bsp1720I GCTNAGC 1 cut(s) 84
BspACI CCGC 1 cut(s) 46
BspANI GGCC 2 cut(s) 276, 536
BspCNI CTCAG 1 cut(s) 97
BspLI GGNNCC 2 cut(s) 226, 277
BspMAI CTGCAG 1 cut(s) 274
BspMI ACCTGC 1 cut(s) 584
BspOI GCTAGC 1 cut(s) 611
BspT107I GGYRCC 1 cut(s) 224
BspTI CTTAAG 1 cut(s) 524
BsrGI TGTACA 1 cut(s) 307
BsrI ACTGG 2 cut(s) 157, 371
Bst4CI ACNGT 3 cut(s) 190, 224, 471
Bst6I CTCTTC 1 cut(s) 14
BstAFI CTTAAG 1 cut(s) 524
BstAUI TGTACA 1 cut(s) 307
BstC8I GCNNGC 3 cut(s) 177, 274, 609
BstDEI CTNAG 3 cut(s) 84, 89, 128
BstENI CCTNNNNNAGG 2 cut(s) 131, 527
BstHHI GCGC 1 cut(s) 62
BstMAI GTCTC 1 cut(s) 11
BstMWI GCNNNNNNNGC 1 cut(s) 94
BstSFI CTRYAG 1 cut(s) 270
BstSLI GKGCMC 1 cut(s) 421
BstV2I GAAGAC 1 cut(s) 458
BstXI CCANNNNNNTGG 1 cut(s) 413
BsuRI GGCC 2 cut(s) 276, 536
BtsIMutI CAGTG 1 cut(s) 186
BveI ACCTGC 1 cut(s) 584
Cac8I GCNNGC 3 cut(s) 177, 274, 609
CfoI GCGC 1 cut(s) 62
Cfr13I GGNCC 2 cut(s) 275, 535
Csp6I GTAC 3 cut(s) 225, 243, 308
CviQI GTAC 3 cut(s) 225, 243, 308
DdeI CTNAG 3 cut(s) 84, 89, 128
DraI TTTAAA 2 cut(s) 165, 543
Eam1104I CTCTTC 1 cut(s) 14
EarI CTCTTC 1 cut(s) 14
EciI GGCGGA 1 cut(s) 35
Eco57I CTGAAG 1 cut(s) 51
EcoNI CCTNNNNNAGG 2 cut(s) 131, 527
EcoO109I RGGNCCY 1 cut(s) 275
FalI AAGNNNNNCTT 2 cut(s) 49, 81
FspBI CTAG 1 cut(s) 608
GlaI GCGC 1 cut(s) 61
GsuI CTGGAG 2 cut(s) 174, 231
HaeIII GGCC 2 cut(s) 276, 536
HhaI GCGC 1 cut(s) 62
Hin6I GCGC 1 cut(s) 60
HinP1I GCGC 1 cut(s) 60
HincII GTYRAC 2 cut(s) 184, 211
HindII GTYRAC 2 cut(s) 184, 211
HindIII AAGCTT 1 cut(s) 410
HinfI GANTC 4 cut(s) 4, 374, 392, 632
HpaI GTTAAC 1 cut(s) 184
Hpy166II GTNNAC 4 cut(s) 184, 211, 308, 419
Hpy188III TCNNGA 3 cut(s) 248, 508, 620
Hpy8I GTNNAC 4 cut(s) 184, 211, 308, 419
HpyAV CCTTC 2 cut(s) 75, 595
HpyCH4III ACNGT 3 cut(s) 190, 224, 471
HpyCH4IV ACGT 1 cut(s) 41
HpyCH4V TGCA 2 cut(s) 272, 419
HpyF10VI GCNNNNNNNGC 1 cut(s) 94
HpyF3I CTNAG 3 cut(s) 84, 89, 128
HpySE526I ACGT 1 cut(s) 41
HspAI GCGC 1 cut(s) 60
KpnI GGTACC 1 cut(s) 228
KspAI GTTAAC 1 cut(s) 184
LmnI GCTCC 3 cut(s) 343, 604, 616
LweI GCATC 1 cut(s) 94
MaeI CTAG 1 cut(s) 608
MaeII ACGT 1 cut(s) 41
MboII GAAGA 3 cut(s) 170, 190, 463
MhlI GDGCHC 2 cut(s) 85, 421
MluCI AATT 5 cut(s) 253, 433, 513, 581, 591
MlyI GAGTC 1 cut(s) 13
MmeI TCCRAC 1 cut(s) 173
MnlI CCTC 8 cut(s) 17, 30, 127, 239, 322, 436, 523, 526
MseI TTAA 5 cut(s) 164, 183, 315, 525, 542
MslI CAYNNNNRTG 1 cut(s) 102
MspCI CTTAAG 1 cut(s) 524
MwoI GCNNNNNNNGC 1 cut(s) 94
NheI GCTAGC 1 cut(s) 607
NlaIV GGNNCC 2 cut(s) 226, 277
PcsI WCGNNNNNNNCGW 1 cut(s) 47
PfeI GAWTC 3 cut(s) 374, 392, 632
PleI GAGTC 1 cut(s) 12
PpsI GAGTC 1 cut(s) 12
PspN4I GGNNCC 2 cut(s) 226, 277
PspPI GGNCC 2 cut(s) 275, 535
PstI CTGCAG 1 cut(s) 274
RsaI GTAC 3 cut(s) 226, 244, 309
RsaNI GTAC 3 cut(s) 225, 243, 308
RseI CAYNNNNRTG 1 cut(s) 102
SaqAI TTAA 5 cut(s) 164, 183, 315, 525, 542
Sau96I GGNCC 2 cut(s) 275, 535
SchI GAGTC 1 cut(s) 13
SduI GDGCHC 2 cut(s) 85, 421
SfaNI GCATC 1 cut(s) 94
SfcI CTRYAG 1 cut(s) 270
SmiI ATTTAAAT 2 cut(s) 165, 543
SmiMI CAYNNNNRTG 1 cut(s) 102
SmlI CTYRAG 1 cut(s) 524
SmoI CTYRAG 1 cut(s) 524
Sse9I AATT 5 cut(s) 253, 433, 513, 581, 591
SsiI CCGC 1 cut(s) 46
SspMI CTAG 1 cut(s) 608
SwaI ATTTAAAT 2 cut(s) 165, 543
TaaI ACNGT 3 cut(s) 190, 224, 471
TaiI ACGT 1 cut(s) 44
TasI AATT 5 cut(s) 253, 433, 513, 581, 591
TatI WGTACW 2 cut(s) 242, 307
TfiI GAWTC 3 cut(s) 374, 392, 632
Tru1I TTAA 5 cut(s) 164, 183, 315, 525, 542
Tru9I TTAA 5 cut(s) 164, 183, 315, 525, 542
TscAI CASTG 1 cut(s) 193
TspDTI ATGAA 3 cut(s) 183, 405, 553
TspGWI ACGGA 1 cut(s) 464
TspRI CASTG 1 cut(s) 193
Vha464I CTTAAG 1 cut(s) 524
VneI GTGCAC 1 cut(s) 417
XagI CCTNNNNNAGG 2 cut(s) 131, 527
XapI RAATTY 1 cut(s) 581
XspI CTAG 1 cut(s) 608
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.