AT5G08630

DDT domain-containing protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
arabidopsis_thaliana
5
OG0003443
Physical Location & Seq
Reverse (-)
2798010 .. 2803205
5196 bp
Loading structure...
UTR
Exon/CDS
Intron
AT5G08630.1

Sequence Viewer

Length: 2172 bp
ATGCCTCTACTAAAAAAGAAGTCACATAAACTACTGGAGCCCCCAAAGAACTTGGAGCCTCAAGAACTTGTCTATCAAGTTCGTCTAACAAATGAGATCTTTCGAGATTATCAATTGTACTTGAAGAGGTTAAATCTGTATCGCAACCGAGTTTGGACTTGTAAGTCTACTGGTAAAACTAGCTTGAGCTACGAGGAGGCCTTAGATTCAGAAAAACTGGCAGGCAAGAAGGTTCAAACTCTGCCCAGAGAGCTAGTTGCACCTGCTTTACGCATCATCCAATTCAGTACGCTTTCATTGAAAGATCTTGCTGACAAAATAGCGACAGAGTTGCAAGATTGCTTTTTCCCTGGCGCAGAGTTGTATGGGGAAAGGGATGGGGAACTGCATCCTTGCAAAATCTTGAGGATAGTATCAGATGGGGATAGTAAACCTCAGTATGAGGTAGGCTTCCTTGACAAAAACAAGGAAGTAGATGATAACACAGTGCTCTTTGGGGAGGATCTGTCATGGAAGAAGTTTCCATTTAGTAGAAATTTTCTGAAGTCCTTCATTCGAGATTCCACATGCCACAGTATACCTTGGGTAGTAAATGATTACCTGGCTAAAGCACATGAAATCACGAGAAAGATTCCCAAGGAACTTCAGAACAAATATGTCTTTCAGAATGGAGAACTGGTTCAACAAAGGAAGCAGGAAGATAAAACCGGAAGGGAAAATAGAAAAAGAAAGAGAGCAGAAAATGGTAAACATGTTGCAGAGGAGACAGATAGAGAGGTTAATGGGTCTGAGGAAGAGGCTATCAATTACCCAATCGAAGATTTACTTTTGCCACCTGATCCTGATGTCACTCAGCGTCCTTCTCCTTCCCGGGATTTTAGTGTTCCTATGGATTGTGTTGGGGATCTTCTTATGGTCTGGGACTTTTGTACCTCATTTGGTAGGCAGCTGCATCTATGGCGATTTTCTCTTGAAGACTTTGAAAATGCTGTCTGCCACAAGGAGAGTAATTTGGTTCTTATCATGGAAGTGCATGCCTCTCTTTTTCGGTTCCTCATCAATGAACGTGGTGATAGTTTCAAAGCTTTACAGAGAAGGAGTCGCAAGTCGAAGATAACATTGATCACGTGGGCAGAGTATCTTTGTGATTTCCTGGAATCAGTCAACACTCCTGATTTGTGCTTCGATGTTGGAACGATCAAACGTGGACATTATGGTCTCTTGGACCCAAATGTAAAATTGAAAATCTTAAGGGAATTAGTGAACCATATAACCGAAACAGGTATGTTCAAGGGGGAAATAGATGAGCTTGTTGAACAACGGCATGCCCTTGGAGCTGCTAGAAGAGAAGAAGCATTGGCGGAGGCCCGACAGATAAGAGAGGAGAAAGAACGGTCCAAAACTGGTGAGGAAGCTAATGGAGTTTTAGACAATAATAGGTTGGAGAAAAAGAAAAATAGCGCACAAGTATTAGAAAGCAGTGAAGACAGCAAAAAGAATGAGAGCACTGCAGGGGGAAGCAAGATGGAGAATGGGTCTGTTTCTTCGGAAAACATTGAAAAATCAGAGAAAAGGCTTATAGGGAATGTCTATCTGAGAAAGCACAAAAGGCAGATGACGGATACAAAAATCGAACCAAAAGAGGAGGAGGAGGATGAGAAAGCAGAGGAGGACGAAGAGGAGAAAGGATTTTCAGTGAAGAAGCAGGAGGTAAAATCTGCAAGCGAAGATGAGAAAGGAACTTTTGAAAGGAGGGGGCCCGAACAGAGGAGGCAATATTATGAGCGGGAGATGGAGAAAATAGTCATACGTACAAACCCCTTGGGTAAAGATCGGGACTACAACAGGTACTGGTGGTTCCGAAGCAATGGGAGAATATTTGTTGAGAATTCTGATTCCGAAGAATGGGGCTATTATACCGCCAAGGAAGAGCTGGATGCATTGATGGGGTCACTAAACCGTAAAGGAGAGAGGGAACTGTCATTATATACACAACTAGAGATATTCTATGACAGAATATGCTCTACACTACAAAAGAGGACGAAGGACATTGCTCACAACATAGAAATGGAAGAAGCAGTGGTTAGGAGATCTACCCGTGTAAGAGCTCCACTACATGAAAATCCAGCTAGTGCCTTCTTGAGATATGTTAACAAGTGGAAAGAGGACTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
DDT WAC_Acf1_DNA_bd WHIM1 WSD

Protein Analysis

723

Amino Acids

84.4

Weight (kDa)

6.12

Isoelectric Point (pI)

47.7

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
WAC_Acf1_DNA_bd PF10537 24 - 120 9.8e-31 ATP-utilising chromatin assembly and remodelling N-terminal
DDT PF02791 298 - 355 3.8e-17 DDT domain
WHIM1 PF15612 396 - 435 1.1e-06 WSTF, HB1, Itc1p, MBD9 motif 1
WSD PF15613 603 - 667 1.2e-26 Williams-Beuren syndrome DDT (WSD), D-TOX E motif
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 1 cut(s) 271
AasI GACNNNNNNGTC 2 cut(s) 163, 1215
Acc36I ACCTGC 1 cut(s) 271
AccBSI CCGCTC 1 cut(s) 1786
AccI GTMKAC 2 cut(s) 167, 577
AciI CCGC 3 cut(s) 1361, 1786, 1920
AclWI GGATC 3 cut(s) 510, 833, 912
AcsI RAATTY 2 cut(s) 535, 1888
AcuI CTGAAG 2 cut(s) 563, 629
AcvI CACGTG 1 cut(s) 1128
AfaI GTAC 5 cut(s) 119, 289, 931, 1813, 1850
AfiI CCNNNNNNNGG 2 cut(s) 1767, 1905
AflII CTTAAG 1 cut(s) 1249
AflIII ACRYGT 1 cut(s) 751
AjnI CCWGG 3 cut(s) 349, 600, 1152
AloI GAACNNNNNNTCC 2 cut(s) 663, 695
Alw21I GWGCWC 3 cut(s) 492, 1508, 2110
Alw26I GTCTC 2 cut(s) 758, 1223
AlwI GGATC 3 cut(s) 510, 833, 912
AlwNI CAGNNNCTG 1 cut(s) 1851
Ama87I CYCGRG 1 cut(s) 870
AoxI GGCC 3 cut(s) 198, 1365, 1757
ApaI GGGCCC 1 cut(s) 1761
ApeKI GCWGC 3 cut(s) 946, 949, 1337
ApoI RAATTY 2 cut(s) 535, 1888
Asp700I GAANNNNTTC 2 cut(s) 548, 678
AspLEI GCGC 2 cut(s) 356, 1463
AspS9I GGNCC 5 cut(s) 1225, 1366, 1395, 1757, 1758
AsuC2I CCSGG 2 cut(s) 871, 872
AsuHPI GGTGA 2 cut(s) 1082, 1418
AvaI CYCGRG 1 cut(s) 870
AvaII GGWCC 2 cut(s) 1225, 1395
BaeGI GKGCMC 1 cut(s) 1761
BaeI ACNNNNGTAYC 2 cut(s) 913, 946
BanII GRGCYC 3 cut(s) 42, 1761, 2110
BauI CACGAG 1 cut(s) 622
BbrPI CACGTG 1 cut(s) 1128
BbsI GAAGAC 2 cut(s) 981, 1491
Bbv12I GWGCWC 3 cut(s) 492, 1508, 2110
BbvI GCAGC 3 cut(s) 936, 958, 1324
BccI CCATC 5 cut(s) 371, 413, 1519, 1786, 1939
BceAI ACGGC 1 cut(s) 1337
BcgI CGANNNNNNTGC 2 cut(s) 313, 347
BciT130I CCWGG 3 cut(s) 351, 602, 1154
BciVI GTATCC 1 cut(s) 1615
BclI TGATCA 1 cut(s) 1122
BcnI CCSGG 2 cut(s) 871, 872
BcoDI GTCTC 2 cut(s) 758, 1223
BfaI CTAG 5 cut(s) 180, 254, 1341, 1997, 2130
BfmI CTRYAG 1 cut(s) 1509
BfrI CTTAAG 1 cut(s) 1249
BfuAI ACCTGC 1 cut(s) 271
BfuI GTATCC 1 cut(s) 1615
BglII AGATCT 3 cut(s) 96, 304, 2090
BisI GCNGC 3 cut(s) 947, 950, 1338
BlsI GCNGC 3 cut(s) 948, 951, 1339
Bme1390I CCNGG 5 cut(s) 351, 602, 871, 872, 1154
Bme18I GGWCC 2 cut(s) 1225, 1395
BmeT110I CYCGRG 1 cut(s) 870
BmgT120I GGNCC 5 cut(s) 1225, 1366, 1395, 1757, 1758
BmiI GGNNCC 7 cut(s) 39, 57, 1052, 1227, 1758, 1759, 1859
BmrFI CCNGG 5 cut(s) 351, 602, 871, 872, 1154
BmsI GCATC 4 cut(s) 282, 397, 961, 1927
BpiI GAAGAC 2 cut(s) 981, 1491
BpmI CTGGAG 1 cut(s) 56
BpuEI CTTGAG 4 cut(s) 45, 205, 424, 2161
BpuMI CCSGG 2 cut(s) 871, 872
BsaAI YACGTR 2 cut(s) 1128, 1811
BsaI GGTCTC 1 cut(s) 1223
BsaJI CCNNGG 7 cut(s) 349, 581, 636, 870, 1330, 1821, 1923
BsaWI WCCGGW 1 cut(s) 707
BsaXI ACNNNNNCTCC 6 cut(s) 491, 521, 663, 693, 1520, 1550
Bsc4I CCNNNNNNNGG 2 cut(s) 1767, 1905
Bse1I ACTGG 6 cut(s) 39, 175, 222, 681, 1408, 1856
Bse3DI GCAATG 2 cut(s) 1873, 2049
BseBI CCWGG 3 cut(s) 351, 602, 1154
BseDI CCNNGG 7 cut(s) 349, 581, 636, 870, 1330, 1821, 1923
BseGI GGATG 5 cut(s) 276, 382, 388, 1660, 1942
BseLI CCNNNNNNNGG 2 cut(s) 1767, 1905
BseMI GCAATG 2 cut(s) 1873, 2049
BseMII CTCAG 4 cut(s) 449, 780, 866, 1586
BseNI ACTGG 6 cut(s) 39, 175, 222, 681, 1408, 1856
BseRI GAGGAG 9 cut(s) 209, 776, 1397, 1658, 1661, 1664, 1682, 1694, 1783
BseSI GKGCMC 1 cut(s) 1761
BseXI GCAGC 3 cut(s) 936, 958, 1324
BshFI GGCC 3 cut(s) 200, 1367, 1759
BsiHKAI GWGCWC 3 cut(s) 492, 1508, 2110
BsiHKCI CYCGRG 1 cut(s) 870
BsiSI CCGG 2 cut(s) 708, 871
BslFI GGGAC 2 cut(s) 935, 1850
BslI CCNNNNNNNGG 2 cut(s) 1767, 1905
BsmAI GTCTC 2 cut(s) 758, 1223
BsmFI GGGAC 2 cut(s) 935, 1850
BsnI GGCC 3 cut(s) 200, 1367, 1759
Bso31I GGTCTC 1 cut(s) 1223
BsoBI CYCGRG 1 cut(s) 870
Bsp120I GGGCCC 1 cut(s) 1757
Bsp1286I GDGCHC 5 cut(s) 42, 492, 1508, 1761, 2110
Bsp143I GATC 9 cut(s) 96, 304, 502, 838, 904, 1122, 1197, 1831, 2090
BspACI CCGC 3 cut(s) 1361, 1786, 1920
BspANI GGCC 3 cut(s) 200, 1367, 1759
BspCNI CTCAG 4 cut(s) 448, 781, 865, 1587
BspLI GGNNCC 7 cut(s) 39, 57, 1052, 1227, 1758, 1759, 1859
BspMAI CTGCAG 1 cut(s) 1513
BspMI ACCTGC 1 cut(s) 271
BspPI GGATC 3 cut(s) 510, 833, 912
BspQI GCTCTTC 1 cut(s) 1923
BspTI CTTAAG 1 cut(s) 1249
BspTNI GGTCTC 1 cut(s) 1223
BsrBI CCGCTC 1 cut(s) 1786
BsrDI GCAATG 2 cut(s) 1873, 2049
BsrI ACTGG 6 cut(s) 39, 175, 222, 681, 1408, 1856
BssECI CCNNGG 7 cut(s) 349, 581, 636, 870, 1330, 1821, 1923
BssMI GATC 9 cut(s) 96, 304, 502, 838, 904, 1122, 1197, 1831, 2090
BssNAI GTATAC 1 cut(s) 578
BssSI CACGAG 1 cut(s) 622
BssT1I CCWWGG 5 cut(s) 581, 636, 1330, 1821, 1923
Bst1107I GTATAC 1 cut(s) 578
Bst2BI CACGAG 1 cut(s) 622
Bst2UI CCWGG 3 cut(s) 351, 602, 1154
Bst4CI ACNGT 5 cut(s) 487, 575, 1395, 1961, 1980
Bst6I CTCTTC 5 cut(s) 119, 789, 1339, 1671, 1923
BstAFI CTTAAG 1 cut(s) 1249
BstBAI YACGTR 2 cut(s) 1128, 1811
BstC8I GCNNGC 4 cut(s) 223, 1035, 1326, 1723
BstDEI CTNAG 5 cut(s) 202, 435, 789, 852, 1595
BstF5I GGATG 5 cut(s) 276, 382, 388, 1660, 1942
BstHHI GCGC 2 cut(s) 356, 1463
BstKTI GATC 9 cut(s) 99, 307, 505, 841, 907, 1125, 1200, 1834, 2093
BstMAI GTCTC 2 cut(s) 758, 1223
BstMBI GATC 9 cut(s) 96, 304, 502, 838, 904, 1122, 1197, 1831, 2090
BstMWI GCNNNNNNNGC 4 cut(s) 250, 958, 1334, 1609
BstNI CCWGG 3 cut(s) 351, 602, 1154
BstNSI RCATGY 4 cut(s) 570, 755, 1037, 1328
BstSCI CCNGG 5 cut(s) 349, 600, 869, 870, 1152
BstSFI CTRYAG 1 cut(s) 1509
BstSLI GKGCMC 1 cut(s) 1761
BstSNI TACGTA 1 cut(s) 1811
BstV1I GCAGC 3 cut(s) 936, 958, 1324
BstV2I GAAGAC 2 cut(s) 981, 1491
BstX2I RGATCY 5 cut(s) 96, 304, 502, 904, 2090
BstYI RGATCY 5 cut(s) 96, 304, 502, 904, 2090
BstZ17I GTATAC 1 cut(s) 578
BsuI GTATCC 1 cut(s) 1615
BsuRI GGCC 3 cut(s) 200, 1367, 1759
BtsCI GGATG 5 cut(s) 276, 382, 388, 1660, 1942
BtsI GCAGTG 3 cut(s) 1486, 1506, 2085
BtsIMutI CAGTG 5 cut(s) 492, 1486, 1506, 1701, 2085
BveI ACCTGC 1 cut(s) 271
Cac8I GCNNGC 4 cut(s) 223, 1035, 1326, 1723
CaiI CAGNNNCTG 1 cut(s) 1851
CfoI GCGC 2 cut(s) 356, 1463
Cfr13I GGNCC 5 cut(s) 1225, 1366, 1395, 1757, 1758
Cfr9I CCCGGG 1 cut(s) 870
CseI GACGC 1 cut(s) 845
Csp6I GTAC 5 cut(s) 118, 288, 930, 1812, 1849
CspCI CAANNNNNGTGG 2 cut(s) 1048, 1083
CviAII CATG 8 cut(s) 510, 567, 614, 752, 1024, 1034, 1325, 2117
CviQI GTAC 5 cut(s) 118, 288, 930, 1812, 1849
DdeI CTNAG 5 cut(s) 202, 435, 789, 852, 1595
DpnI GATC 9 cut(s) 98, 306, 504, 840, 906, 1124, 1199, 1833, 2092
DpnII GATC 9 cut(s) 96, 304, 502, 838, 904, 1122, 1197, 1831, 2090
DrdI GACNNNNNNGTC 2 cut(s) 163, 1215
DseDI GACNNNNNNGTC 2 cut(s) 163, 1215
Eam1104I CTCTTC 5 cut(s) 119, 789, 1339, 1671, 1923
EarI CTCTTC 5 cut(s) 119, 789, 1339, 1671, 1923
EciI GGCGGA 1 cut(s) 1376
Ecl136II GAGCTC 1 cut(s) 2108
Eco105I TACGTA 1 cut(s) 1811
Eco130I CCWWGG 5 cut(s) 581, 636, 1330, 1821, 1923
Eco147I AGGCCT 1 cut(s) 200
Eco24I GRGCYC 3 cut(s) 42, 1761, 2110
Eco31I GGTCTC 1 cut(s) 1223
Eco47I GGWCC 2 cut(s) 1225, 1395
Eco53kI GAGCTC 1 cut(s) 2108
Eco57I CTGAAG 2 cut(s) 563, 629
Eco72I CACGTG 1 cut(s) 1128
Eco88I CYCGRG 1 cut(s) 870
EcoICRI GAGCTC 1 cut(s) 2108
EcoO109I RGGNCCY 1 cut(s) 1757
EcoRI GAATTC 1 cut(s) 1888
EcoRII CCWGG 3 cut(s) 349, 600, 1152
EcoT14I CCWWGG 5 cut(s) 581, 636, 1330, 1821, 1923
EcoT22I ATGCAT 1 cut(s) 1942
EcoT38I GRGCYC 3 cut(s) 42, 1761, 2110
ErhI CCWWGG 5 cut(s) 581, 636, 1330, 1821, 1923
FaeI CATG 8 cut(s) 513, 570, 617, 755, 1027, 1037, 1328, 2120
FalI AAGNNNNNCTT 2 cut(s) 810, 842
FaqI GGGAC 2 cut(s) 935, 1850
FatI CATG 8 cut(s) 509, 566, 613, 751, 1023, 1033, 1324, 2116
FauI CCCGC 1 cut(s) 1779
FbaI TGATCA 1 cut(s) 1122
FblI GTMKAC 2 cut(s) 167, 577
Fnu4HI GCNGC 3 cut(s) 947, 950, 1338
FokI GGATG 5 cut(s) 263, 375, 389, 1667, 1949
FriOI GRGCYC 3 cut(s) 42, 1761, 2110
Fsp4HI GCNGC 3 cut(s) 947, 950, 1338
FspBI CTAG 5 cut(s) 180, 254, 1341, 1997, 2130
GlaI GCGC 2 cut(s) 355, 1462
GluI GCNGC 3 cut(s) 947, 950, 1338
GsuI CTGGAG 1 cut(s) 56
HaeIII GGCC 3 cut(s) 200, 1367, 1759
HapII CCGG 2 cut(s) 708, 871
HgaI GACGC 1 cut(s) 845
HhaI GCGC 2 cut(s) 356, 1463
Hin1II CATG 8 cut(s) 513, 570, 617, 755, 1027, 1037, 1328, 2120
Hin6I GCGC 2 cut(s) 354, 1461
HinP1I GCGC 2 cut(s) 354, 1461
HincII GTYRAC 2 cut(s) 1165, 2152
HindII GTYRAC 2 cut(s) 1165, 2152
HindIII AAGCTT 1 cut(s) 1083
HinfI GANTC 6 cut(s) 206, 560, 631, 1099, 1157, 1895
HpaI GTTAAC 1 cut(s) 2152
HpaII CCGG 2 cut(s) 708, 871
HphI GGTGA 2 cut(s) 1082, 1418
Hpy166II GTNNAC 8 cut(s) 168, 431, 578, 749, 1165, 1208, 1264, 2152
Hpy8I GTNNAC 8 cut(s) 168, 431, 578, 749, 1165, 1208, 1264, 2152
HpyAV CCTTC 8 cut(s) 223, 559, 705, 870, 876, 1089, 2038, 2146
HpyCH4III ACNGT 5 cut(s) 487, 575, 1395, 1961, 1980
HpyCH4IV ACGT 4 cut(s) 1066, 1127, 1204, 1810
HpyF10VI GCNNNNNNNGC 4 cut(s) 250, 958, 1334, 1609
HpyF3I CTNAG 5 cut(s) 202, 435, 789, 852, 1595
HpySE526I ACGT 4 cut(s) 1066, 1127, 1204, 1810
Hsp92II CATG 8 cut(s) 513, 570, 617, 755, 1027, 1037, 1328, 2120
HspAI GCGC 2 cut(s) 354, 1461
Ksp22I TGATCA 1 cut(s) 1122
KspAI GTTAAC 1 cut(s) 2152
Kzo9I GATC 9 cut(s) 96, 304, 502, 838, 904, 1122, 1197, 1831, 2090
LguI GCTCTTC 1 cut(s) 1923
LmnI GCTCC 4 cut(s) 37, 55, 1334, 2113
Lsp1109I GCAGC 3 cut(s) 936, 958, 1324
LweI GCATC 4 cut(s) 282, 397, 961, 1927
MaeI CTAG 5 cut(s) 180, 254, 1341, 1997, 2130
MaeII ACGT 4 cut(s) 1066, 1127, 1204, 1810
MaeIII GTNAC 3 cut(s) 21, 847, 1950
MalI GATC 9 cut(s) 98, 306, 504, 840, 906, 1124, 1199, 1833, 2092
MbiI CCGCTC 1 cut(s) 1786
MboI GATC 9 cut(s) 96, 304, 502, 838, 904, 1122, 1197, 1831, 2090
MfeI CAATTG 1 cut(s) 113
MflI RGATCY 5 cut(s) 96, 304, 502, 904, 2090
MhlI GDGCHC 5 cut(s) 42, 492, 1508, 1761, 2110
MluCI AATT 8 cut(s) 113, 281, 535, 805, 1009, 1238, 1256, 1888
MlyI GAGTC 1 cut(s) 1108
MmeI TCCRAC 2 cut(s) 1171, 1422
Mph1103I ATGCAT 1 cut(s) 1942
MroXI GAANNNNTTC 2 cut(s) 548, 678
MseI TTAA 4 cut(s) 131, 780, 1250, 2151
MslI CAYNNNNRTG 2 cut(s) 1028, 2066
MspA1I CMGCKG 1 cut(s) 949
MspCI CTTAAG 1 cut(s) 1249
MspI CCGG 2 cut(s) 708, 871
MspR9I CCNGG 5 cut(s) 351, 602, 871, 872, 1154
MunI CAATTG 1 cut(s) 113
MvaI CCWGG 3 cut(s) 351, 602, 1154
MwoI GCNNNNNNNGC 4 cut(s) 250, 958, 1334, 1609
NciI CCSGG 2 cut(s) 871, 872
NdeII GATC 9 cut(s) 96, 304, 502, 838, 904, 1122, 1197, 1831, 2090
NlaIII CATG 8 cut(s) 513, 570, 617, 755, 1027, 1037, 1328, 2120
NlaIV GGNNCC 7 cut(s) 39, 57, 1052, 1227, 1758, 1759, 1859
NmuCI GTSAC 3 cut(s) 21, 847, 1950
NsiI ATGCAT 1 cut(s) 1942
NspI RCATGY 4 cut(s) 570, 755, 1037, 1328
PaeI GCATGC 2 cut(s) 1037, 1328
PaqCI CACCTGC 1 cut(s) 271
PceI AGGCCT 1 cut(s) 200
PciI ACATGT 1 cut(s) 751
PciSI GCTCTTC 1 cut(s) 1923
PdmI GAANNNNTTC 2 cut(s) 548, 678
PfeI GAWTC 5 cut(s) 206, 560, 631, 1157, 1895
PfoI TCCNGGA 1 cut(s) 1152
PkrI GCNGC 3 cut(s) 948, 951, 1339
PleI GAGTC 1 cut(s) 1107
PmaCI CACGTG 1 cut(s) 1128
PmlI CACGTG 1 cut(s) 1128
PpsI GAGTC 1 cut(s) 1107
Ppu21I YACGTR 2 cut(s) 1128, 1811
PscI ACATGT 1 cut(s) 751
Psp124BI GAGCTC 1 cut(s) 2110
Psp6I CCWGG 3 cut(s) 349, 600, 1152
PspCI CACGTG 1 cut(s) 1128
PspGI CCWGG 3 cut(s) 349, 600, 1152
PspN4I GGNNCC 7 cut(s) 39, 57, 1052, 1227, 1758, 1759, 1859
PspOMI GGGCCC 1 cut(s) 1757
PspPI GGNCC 5 cut(s) 1225, 1366, 1395, 1757, 1758
PsrI GAACNNNNNNTAC 2 cut(s) 1841, 1873
PstI CTGCAG 1 cut(s) 1513
PstNI CAGNNNCTG 1 cut(s) 1851
PsuI RGATCY 5 cut(s) 96, 304, 502, 904, 2090
PvuII CAGCTG 1 cut(s) 949
RsaI GTAC 5 cut(s) 119, 289, 931, 1813, 1850
RsaNI GTAC 5 cut(s) 118, 288, 930, 1812, 1849
RseI CAYNNNNRTG 2 cut(s) 1028, 2066
SacI GAGCTC 1 cut(s) 2110
SapI GCTCTTC 1 cut(s) 1923
SaqAI TTAA 4 cut(s) 131, 780, 1250, 2151
SatI GCNGC 3 cut(s) 947, 950, 1338
Sau3AI GATC 9 cut(s) 96, 304, 502, 838, 904, 1122, 1197, 1831, 2090
Sau96I GGNCC 5 cut(s) 1225, 1366, 1395, 1757, 1758
SchI GAGTC 1 cut(s) 1108
ScrFI CCNGG 5 cut(s) 351, 602, 871, 872, 1154
SduI GDGCHC 5 cut(s) 42, 492, 1508, 1761, 2110
SfaNI GCATC 4 cut(s) 282, 397, 961, 1927
SfcI CTRYAG 1 cut(s) 1509
SinI GGWCC 2 cut(s) 1225, 1395
SmaI CCCGGG 1 cut(s) 872
SmiMI CAYNNNNRTG 2 cut(s) 1028, 2066
SmlI CTYRAG 5 cut(s) 60, 184, 403, 1249, 2140
SmoI CTYRAG 5 cut(s) 60, 184, 403, 1249, 2140
SnaBI TACGTA 1 cut(s) 1811
SphI GCATGC 2 cut(s) 1037, 1328
Sse9I AATT 8 cut(s) 113, 281, 535, 805, 1009, 1238, 1256, 1888
SseBI AGGCCT 1 cut(s) 200
SsiI CCGC 3 cut(s) 1361, 1786, 1920
SspI AATATT 2 cut(s) 1778, 1878
SspMI CTAG 5 cut(s) 180, 254, 1341, 1997, 2130
SstI GAGCTC 1 cut(s) 2110
StuI AGGCCT 1 cut(s) 200
StyD4I CCNGG 5 cut(s) 349, 600, 869, 870, 1152
StyI CCWWGG 5 cut(s) 581, 636, 1330, 1821, 1923
TaaI ACNGT 5 cut(s) 487, 575, 1395, 1961, 1980
TaiI ACGT 4 cut(s) 1069, 1130, 1207, 1813
TaqI TCGA 6 cut(s) 103, 556, 816, 1109, 1185, 1632
TasI AATT 8 cut(s) 113, 281, 535, 805, 1009, 1238, 1256, 1888
TatI WGTACW 1 cut(s) 117
TfiI GAWTC 5 cut(s) 206, 560, 631, 1157, 1895
Tru1I TTAA 4 cut(s) 131, 780, 1250, 2151
Tru9I TTAA 4 cut(s) 131, 780, 1250, 2151
TscAI CASTG 5 cut(s) 492, 1486, 1513, 1701, 2085
TseFI GTSAC 3 cut(s) 21, 847, 1950
TseI GCWGC 3 cut(s) 946, 949, 1337
Tsp45I GTSAC 3 cut(s) 21, 847, 1950
TspDTI ATGAA 5 cut(s) 285, 541, 630, 1077, 2133
TspGWI ACGGA 1 cut(s) 1634
TspMI CCCGGG 1 cut(s) 870
TspRI CASTG 5 cut(s) 492, 1486, 1513, 1701, 2085
Vha464I CTTAAG 1 cut(s) 1249
VpaK11BI GGWCC 2 cut(s) 1225, 1395
XapI RAATTY 2 cut(s) 535, 1888
XceI RCATGY 4 cut(s) 570, 755, 1037, 1328
XcmI CCANNNNNNNNNTGG 1 cut(s) 1930
XmaI CCCGGG 1 cut(s) 870
XmiI GTMKAC 2 cut(s) 167, 577
XmnI GAANNNNTTC 2 cut(s) 548, 678
XspI CTAG 5 cut(s) 180, 254, 1341, 1997, 2130
Zsp2I ATGCAT 1 cut(s) 1942
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.