Basic Information

Type: gene

Biological Identity

Species

malus_domestica

Chromosome

Chr15

Orthogroup ID

OG0003443

Physical Location & Seq

Genomic Coordinates Forward (+)

10142689 .. 10148704

Gene Structure 6016 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

MD15G1138200.v1.1.491

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2121 bp

ATGCCTCTATTGAAAAGAAAGCCGTTTCCCTTGGCTGAACTACCTGATGATTTGGAGTCTCATGAGCTTGTATACCAAGTTCGAACTACAAAAGAGATATTTCGAGACTACGGTGAATATCTGAACCGGATAAATTTGTATCGCCAGAGAATTTGGATGTGCAAAGTCTCTGGAAAAACTAATTTGACTTATGAAGAGGCTTTGCTATCAGAAGAACGTGCTACTGAGAAGGTTCAGCAGTTTCCCAAGGAGCTCGTGGCACCTGCACTACAGATTATCCAATACAGTATGCTTTCGTTGAAAGATCTTGCTGACATCATAGCCACAAAGTTGCAGGTTCACATATATGTGGGTGCTGAAATGTATGGGAGGAAGGGTGATGATATGTATCCATGCAAAATATCAAAGGTTTTTGAAGAAAGTGTTGGAAAAGTTGAATATGAGGTAGCTTGGCTTGACAGGAATAAGGAAGTTATGGAAACTTCAGTAATAAATCGGGAAGACCTGAGACAGAAGAAGCCACCATTTAGTAGAAATTTTTTGAAATCTTTTATTCGGGAATCTACATACCGAAATGCTCCTTGGGTGCTCCATGGTAAACTTGCACAAATTCATGGAATCTCAACAAGTGTTCCGGAGAACTTAAGGGGCAAAGTCTCTTTCAAGGATGGTTTACTAGTCTGCAAGAAGAGAAGGAAAAATGAGGAGGAAGCAAAACATGAACTTCAAAATTTTAAAAGGAAAAAAGTTGAAGGTTCAGCTATAGAAGAAGGTGACGAACCAGCAGAAGAACCTATCAAGTATCCAATTGATGACCTTTTGGTACAACCAGATGCAGATGATCCAGTTTTCACGGATCGCCCTTCGCCATTGACGGACTTTAATGTCCCAATGGAATGTGTTGGTGACCTTTTGATGGTTTGGGATTTTTGTTCTTCGTTTGGTAGGCTTTTGCACTTGTGGCCATTCTCTCTTGAAGATTTTGAGAATGCTATCTGCCACAAGATGGGCAATTTGATTCTTCTTGTGGAAACTCATTCGGCTCTTCTCCGGTTGCTCATGAAAGATAATGACGAATATTCTTCAACCATACGGAAAAGAAATCGAAAGTTGAAGATAACTCTAATTACTTGGACAGAGTATTTGTGCGATTTTCTGGATATGGTGAACAGTTCTGAGTTACGTGGTTACATAGCAACTATCAAGCGGGGGCATTATGGCATTTTAGATGCTCATGCTAAATTGCTAATCTTGCGAGAATTGGTCAGTCATGCACTTGAAACAAATACTCTAAGGGAGAAGTTGGCTAAGTTTGTTGAACAGAGGCAGGCACTTGGAGCCACAATAAGGGGGGAAGCATTGGAGGAAGCTAGAAAGAAAAGAGAAGAGAAGGATCGTTTGAAAGCAGAGTATGATCCCAATCAAGTTGTGGATTTGGAGAGTAATGGAAGTGCATCAACAAATGGTAATCATATGAGACAGAACGGAGACATAGTAAAGAAAAGAAATGGTGAAATCCAAACATCAAGACAGAATTGTGCATCAGAGAAAAGTGAGAGCAATCAAATTGACAATGCACCAAAGAAAACAGCCAGGAAACAGAACTTGGAAGTGGACATCCCAATACCCAATGGGAAGGGTTTATCTGAGAAGGACCCACATGAACGATCAAGGGATGATAGAAAGGAAGTCACCGGAATGAAAAGCAAAGAACAGAGGAAGGAATATTATGAGCGGGAGATTGAGAAGCGGGTTATACGTACCAATTCCTTGGGTAAAGACCGAAATTATAACAGATATTGGTGGTTCCAGCGTGATGGAAGAATATTTGTTGAGAGTTCTGACTCCAAGCAGTGGGGGTATTACAGTAGTAAGGAAGAGCTGTATTTGTTGATCGGCTCGCTGAATTGCAAGGGTGAGAGAGAGAGGGCACTTAAAAAGCAGCTGGAAAAATTCAATAGCAGAATATGCCTGGAAATGGAAAAGAGATCAAGGGACTTGGTTCAAGAGGTTGCATTGGAGGAAGCAGTGCTGCGAAGGTCTTCTCGTGTAAGAGCCCCACCGAAGAAAAATCCTGCTAATGCTTTCCTAGAGTACGTTAACAAGTGGAAGGAAGACTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

No ontology terms assigned.

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

DDT WAC_Acf1_DNA_bd WHIM1 WSD

Protein Analysis

707

Amino Acids

82.31

Weight (kDa)

8.72

Isoelectric Point (pI)

40.91

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
WAC_Acf1_DNA_bd	PF10537	24 - 120	5e-30	ATP-utilising chromatin assembly and remodelling N-terminal
DDT	PF02791	299 - 356	2.7e-19	DDT domain
WSD	PF15613	586 - 651	1.3e-26	Williams-Beuren syndrome DDT (WSD), D-TOX E motif

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0003443)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT5G08630 AT5G08630 AT5G08630
fragaria_vesca	FvH4_1g25450 FvH4_1g25450 FvH4_1g25450 FvH4_1g25450 FvH4_1g25450 FvH4_1g25450 FvH4_1g25450
malus_domestica	MD15G1138200.v1.1
prunus_persica	Prupe.4G281500_v2.0.a1 Prupe.4G281500_v2.0.a1 Prupe.4G281500_v2.0.a1 Prupe.4G281500_v2.0.a1 Prupe.4G281500_v2.0.a1 Prupe.4G281500_v2.0.a1 Prupe.4G281500_v2.0.a1 Prupe.4G281500_v2.0.a1 Prupe.4G281500_v2.0.a1 Prupe.4G281500_v2.0.a1 Prupe.4G281500_v2.0.a1 Prupe.4G281500_v2.0.a1
pyrus_communis	pycom15g12450
rosa_chinensis	RchiOBHm_Chr2g0123471
rosa_laevigata	RLG00000018758
rosa_multiflora	Rmu_sc0005876.1_g000001
rosa_roxburghii	Rroxscaffold_2G00120580
rosa_rugosa	Rorug02G0246100 Rorug02G0246200
rosa_samantha	Rh2AG304700 Rh2BG312800 Rh2CG291200 Rh2DG328700
rosa_wichuraiana	Rw0G018560 Rw2G024420

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	1791
AarI	CACCTGC	1 cut(s)	271
AasI	GACNNNNNNGTC	1 cut(s)	884
Acc36I	ACCTGC	2 cut(s)	271, 325
AccB1I	GGYRCC	1 cut(s)	259
AccB7I	CCANNNNNTGG	2 cut(s)	1006, 1854
AccBSI	CCGCTC	1 cut(s)	1735
AccI	GTMKAC	1 cut(s)	72
AccIII	TCCGGA	1 cut(s)	634
AciI	CCGC	3 cut(s)	1207, 1735, 1750
AclWI	GGATC	4 cut(s)	836, 864, 1401, 1409
AcoI	YGGCCR	1 cut(s)	962
AcsI	RAATTY	6 cut(s)	133, 150, 535, 609, 730, 1952
AcuI	CTGAAG	1 cut(s)	468
AfaI	GTAC	3 cut(s)	825, 1762, 2096
AfiI	CCNNNNNNNGG	5 cut(s)	916, 1006, 1347, 1854, 1978
AflII	CTTAAG	1 cut(s)	643
AhlI	ACTAGT	1 cut(s)	676
AjnI	CCWGG	2 cut(s)	1592, 1971
AjuI	GAANNNNNNNTTGG	6 cut(s)	408, 440, 565, 597, 1589, 1621
AluBI	AGCT	7 cut(s)	67, 253, 449, 761, 1370, 1882, 1945
AluI	AGCT	7 cut(s)	67, 253, 449, 761, 1370, 1882, 1945
Alw21I	GWGCWC	2 cut(s)	255, 591
Alw26I	GTCTC	7 cut(s)	63, 99, 172, 502, 661, 1471, 1482
AlwI	GGATC	4 cut(s)	836, 864, 1401, 1409
Aor13HI	TCCGGA	1 cut(s)	634
AoxI	GGCC	1 cut(s)	962
ApeKI	GCWGC	2 cut(s)	1942, 2032
ApoI	RAATTY	6 cut(s)	133, 150, 535, 609, 730, 1952
ArsI	GACNNNNNNTTYG	2 cut(s)	1126, 1158
Asp700I	GAANNNNTTC	1 cut(s)	2041
AspS9I	GGNCC	1 cut(s)	1654
AsuHPI	GGTGA	8 cut(s)	125, 389, 785, 917, 1177, 1523, 1684, 1928
AsuII	TTCGAA	1 cut(s)	82
AvaII	GGWCC	1 cut(s)	1654
BaeGI	GKGCMC	1 cut(s)	1933
BalI	TGGCCA	1 cut(s)	964
BanI	GGYRCC	1 cut(s)	259
BanII	GRGCYC	2 cut(s)	255, 2059
BauI	CACGAG	2 cut(s)	254, 2046
BbsI	GAAGAC	2 cut(s)	507, 2034
Bbv12I	GWGCWC	2 cut(s)	255, 591
BbvI	GCAGC	2 cut(s)	1954, 2019
BccI	CCATC	4 cut(s)	662, 910, 1000, 1811
BceAI	ACGGC	1 cut(s)	7
BciT130I	CCWGG	2 cut(s)	1594, 1973
BciVI	GTATCC	2 cut(s)	399, 813
BcoDI	GTCTC	7 cut(s)	63, 99, 172, 502, 661, 1471, 1482
BcuI	ACTAGT	1 cut(s)	676
BfaI	CTAG	3 cut(s)	677, 1371, 2090
BfmI	CTRYAG	2 cut(s)	269, 762
BfrI	CTTAAG	1 cut(s)	643
BfuAI	ACCTGC	2 cut(s)	271, 325
BfuI	GTATCC	2 cut(s)	399, 813
BglII	AGATCT	1 cut(s)	304
BisI	GCNGC	2 cut(s)	1943, 2033
BlsI	GCNGC	2 cut(s)	1944, 2034
Bme1390I	CCNGG	2 cut(s)	1594, 1973
Bme18I	GGWCC	1 cut(s)	1654
BmgT120I	GGNCC	1 cut(s)	1654
BmiI	GGNNCC	4 cut(s)	261, 1339, 1656, 1808
BmrFI	CCNGG	2 cut(s)	1594, 1973
BmsI	GCATC	4 cut(s)	823, 1219, 1463, 1550
BpiI	GAAGAC	2 cut(s)	507, 2034
Bpu14I	TTCGAA	1 cut(s)	82
BsaAI	YACGTR	2 cut(s)	1184, 1760
BsaBI	GATNNNNATC	2 cut(s)	387, 1419
BsaJI	CCNNGG	5 cut(s)	30, 246, 581, 592, 1770
BsaWI	WCCGGW	4 cut(s)	126, 634, 1050, 1694
BsaXI	ACNNNNNCTCC	4 cut(s)	361, 391, 1479, 1509
Bsc4I	CCNNNNNNNGG	5 cut(s)	916, 1006, 1347, 1854, 1978
Bse1I	ACTGG	1 cut(s)	845
Bse8I	GATNNNNATC	2 cut(s)	387, 1419
BseAI	TCCGGA	1 cut(s)	634
BseBI	CCWGG	2 cut(s)	1594, 1973
BseDI	CCNNGG	5 cut(s)	30, 246, 581, 592, 1770
BseGI	GGATG	4 cut(s)	162, 673, 1617, 1681
BseJI	GATNNNNATC	2 cut(s)	387, 1419
BseLI	CCNNNNNNNGG	5 cut(s)	916, 1006, 1347, 1854, 1978
BseMII	CTCAG	4 cut(s)	216, 497, 1167, 1638
BseNI	ACTGG	1 cut(s)	845
BseRI	GAGGAG	1 cut(s)	719
BseSI	GKGCMC	1 cut(s)	1933
BseXI	GCAGC	2 cut(s)	1954, 2019
BsgI	GTGCAG	1 cut(s)	249
BshFI	GGCC	1 cut(s)	964
BshNI	GGYRCC	1 cut(s)	259
BsiHKAI	GWGCWC	2 cut(s)	255, 591
BsiSI	CCGG	4 cut(s)	127, 635, 1051, 1695
BslFI	GGGAC	2 cut(s)	872, 2009
BslI	CCNNNNNNNGG	5 cut(s)	916, 1006, 1347, 1854, 1978
BsmAI	GTCTC	7 cut(s)	63, 99, 172, 502, 661, 1471, 1482
BsmFI	GGGAC	2 cut(s)	872, 2009
BsmI	GAATGC	1 cut(s)	994
BsnI	GGCC	1 cut(s)	964
Bsp119I	TTCGAA	1 cut(s)	82
Bsp1286I	GDGCHC	4 cut(s)	255, 591, 1933, 2059
Bsp13I	TCCGGA	1 cut(s)	634
Bsp143I	GATC	8 cut(s)	304, 841, 856, 1393, 1414, 1667, 1893, 1988
Bsp19I	CCATGG	1 cut(s)	592
BspACI	CCGC	3 cut(s)	1207, 1735, 1750
BspANI	GGCC	1 cut(s)	964
BspCNI	CTCAG	4 cut(s)	217, 498, 1168, 1639
BspEI	TCCGGA	1 cut(s)	634
BspHI	TCATGA	2 cut(s)	61, 1059
BspLI	GGNNCC	4 cut(s)	261, 1339, 1656, 1808
BspMI	ACCTGC	2 cut(s)	271, 325
BspPI	GGATC	4 cut(s)	836, 864, 1401, 1409
BspQI	GCTCTTC	2 cut(s)	1050, 1872
BspT104I	TTCGAA	1 cut(s)	82
BspT107I	GGYRCC	1 cut(s)	259
BspTI	CTTAAG	1 cut(s)	643
BsrBI	CCGCTC	1 cut(s)	1735
BsrI	ACTGG	1 cut(s)	845
BssECI	CCNNGG	5 cut(s)	30, 246, 581, 592, 1770
BssMI	GATC	8 cut(s)	304, 841, 856, 1393, 1414, 1667, 1893, 1988
BssNAI	GTATAC	1 cut(s)	73
BssSI	CACGAG	2 cut(s)	254, 2046
BssT1I	CCWWGG	5 cut(s)	30, 246, 581, 592, 1770
Bst1107I	GTATAC	1 cut(s)	73
Bst2BI	CACGAG	2 cut(s)	254, 2046
Bst2UI	CCWGG	2 cut(s)	1594, 1973
Bst4CI	ACNGT	4 cut(s)	113, 287, 1172, 1868
Bst6I	CTCTTC	5 cut(s)	189, 683, 1050, 1380, 1872
BstAFI	CTTAAG	1 cut(s)	643
BstAPI	GCANNNNNTGC	1 cut(s)	1968
BstBAI	YACGTR	2 cut(s)	1184, 1760
BstBI	TTCGAA	1 cut(s)	82
BstC8I	GCNNGC	2 cut(s)	1329, 1901
BstDEI	CTNAG	6 cut(s)	225, 506, 1176, 1292, 1308, 1647
BstDSI	CCRYGG	1 cut(s)	592
BstEII	GGTNACC	1 cut(s)	905
BstF5I	GGATG	4 cut(s)	162, 673, 1617, 1681
BstKTI	GATC	8 cut(s)	307, 844, 859, 1396, 1417, 1670, 1896, 1991
BstMAI	GTCTC	7 cut(s)	63, 99, 172, 502, 661, 1471, 1482
BstMBI	GATC	8 cut(s)	304, 841, 856, 1393, 1414, 1667, 1893, 1988
BstMWI	GCNNNNNNNGC	4 cut(s)	961, 1252, 1337, 1968
BstNI	CCWGG	2 cut(s)	1594, 1973
BstPI	GGTNACC	1 cut(s)	905
BstSCI	CCNGG	2 cut(s)	1592, 1971
BstSFI	CTRYAG	2 cut(s)	269, 762
BstSLI	GKGCMC	1 cut(s)	1933
BstSNI	TACGTA	1 cut(s)	1760
BstV1I	GCAGC	2 cut(s)	1954, 2019
BstV2I	GAAGAC	2 cut(s)	507, 2034
BstX2I	RGATCY	1 cut(s)	304
BstXI	CCANNNNNNTGG	2 cut(s)	1771, 1817
BstYI	RGATCY	1 cut(s)	304
BstZ17I	GTATAC	1 cut(s)	73
BsuI	GTATCC	2 cut(s)	399, 813
BsuRI	GGCC	1 cut(s)	964
BtgI	CCRYGG	1 cut(s)	592
BtsCI	GGATG	4 cut(s)	162, 673, 1617, 1681
BtsI	GCAGTG	2 cut(s)	1859, 2034
BtsIMutI	CAGTG	2 cut(s)	1859, 2034
BveI	ACCTGC	2 cut(s)	271, 325
Cac8I	GCNNGC	2 cut(s)	1329, 1901
CciI	TCATGA	2 cut(s)	61, 1059
Cfr13I	GGNCC	1 cut(s)	1654
Csp6I	GTAC	3 cut(s)	824, 1761, 2095
CviAII	CATG	9 cut(s)	62, 393, 593, 614, 719, 1060, 1235, 1271, 1661
CviQI	GTAC	3 cut(s)	824, 1761, 2095
DdeI	CTNAG	6 cut(s)	225, 506, 1176, 1292, 1308, 1647
DpnI	GATC	8 cut(s)	306, 843, 858, 1395, 1416, 1669, 1895, 1990
DpnII	GATC	8 cut(s)	304, 841, 856, 1393, 1414, 1667, 1893, 1988
DraI	TTTAAA	1 cut(s)	736
DrdI	GACNNNNNNGTC	1 cut(s)	884
DseDI	GACNNNNNNGTC	1 cut(s)	884
EaeI	YGGCCR	1 cut(s)	962
Eam1104I	CTCTTC	5 cut(s)	189, 683, 1050, 1380, 1872
EarI	CTCTTC	5 cut(s)	189, 683, 1050, 1380, 1872
Ecl136II	GAGCTC	1 cut(s)	253
Eco105I	TACGTA	1 cut(s)	1760
Eco130I	CCWWGG	5 cut(s)	30, 246, 581, 592, 1770
Eco24I	GRGCYC	2 cut(s)	255, 2059
Eco47I	GGWCC	1 cut(s)	1654
Eco53kI	GAGCTC	1 cut(s)	253
Eco57I	CTGAAG	1 cut(s)	468
Eco91I	GGTNACC	1 cut(s)	905
EcoICRI	GAGCTC	1 cut(s)	253
EcoO109I	RGGNCCY	1 cut(s)	1654
EcoO65I	GGTNACC	1 cut(s)	905
EcoRII	CCWGG	2 cut(s)	1592, 1971
EcoT14I	CCWWGG	5 cut(s)	30, 246, 581, 592, 1770
EcoT38I	GRGCYC	2 cut(s)	255, 2059
ErhI	CCWWGG	5 cut(s)	30, 246, 581, 592, 1770
FaeI	CATG	9 cut(s)	65, 396, 596, 617, 722, 1063, 1238, 1274, 1664
FaqI	GGGAC	2 cut(s)	872, 2009
FatI	CATG	9 cut(s)	61, 392, 592, 613, 718, 1059, 1234, 1270, 1660
FauI	CCCGC	3 cut(s)	1200, 1728, 1743
FauNDI	CATATG	1 cut(s)	1473
FblI	GTMKAC	1 cut(s)	72
Fnu4HI	GCNGC	2 cut(s)	1943, 2033
FokI	GGATG	4 cut(s)	169, 680, 1604, 1688
FriOI	GRGCYC	2 cut(s)	255, 2059
Fsp4HI	GCNGC	2 cut(s)	1943, 2033
FspBI	CTAG	3 cut(s)	677, 1371, 2090
GluI	GCNGC	2 cut(s)	1943, 2033
HaeIII	GGCC	1 cut(s)	964
HapII	CCGG	4 cut(s)	127, 635, 1051, 1695
Hin1II	CATG	9 cut(s)	65, 396, 596, 617, 722, 1063, 1238, 1274, 1664
HincII	GTYRAC	1 cut(s)	2101
HindII	GTYRAC	1 cut(s)	2101
HinfI	GANTC	5 cut(s)	56, 560, 618, 1018, 1844
HpaI	GTTAAC	1 cut(s)	2101
HpaII	CCGG	4 cut(s)	127, 635, 1051, 1695
HphI	GGTGA	8 cut(s)	125, 389, 785, 917, 1177, 1523, 1684, 1928
Hpy166II	GTNNAC	7 cut(s)	73, 340, 599, 674, 1168, 1615, 2101
Hpy188I	TCNGA	6 cut(s)	123, 211, 1177, 1546, 1648, 1843
Hpy8I	GTNNAC	7 cut(s)	73, 340, 599, 674, 1168, 1615, 2101
HpyCH4III	ACNGT	4 cut(s)	113, 287, 1172, 1868
HpyCH4IV	ACGT	4 cut(s)	217, 1183, 1759, 2097
HpyF10VI	GCNNNNNNNGC	4 cut(s)	961, 1252, 1337, 1968
HpyF3I	CTNAG	6 cut(s)	225, 506, 1176, 1292, 1308, 1647
HpySE526I	ACGT	4 cut(s)	217, 1183, 1759, 2097
Hsp92II	CATG	9 cut(s)	65, 396, 596, 617, 722, 1063, 1238, 1274, 1664
Kpn2I	TCCGGA	1 cut(s)	634
KspAI	GTTAAC	1 cut(s)	2101
Kzo9I	GATC	8 cut(s)	304, 841, 856, 1393, 1414, 1667, 1893, 1988
LguI	GCTCTTC	2 cut(s)	1050, 1872
LmnI	GCTCC	4 cut(s)	250, 583, 594, 1337
Lsp1109I	GCAGC	2 cut(s)	1954, 2019
LweI	GCATC	4 cut(s)	823, 1219, 1463, 1550
MaeI	CTAG	3 cut(s)	677, 1371, 2090
MaeII	ACGT	4 cut(s)	217, 1183, 1759, 2097
MaeIII	GTNAC	5 cut(s)	773, 905, 1179, 1187, 1690
MalI	GATC	8 cut(s)	306, 843, 858, 1395, 1416, 1669, 1895, 1990
MbiI	CCGCTC	1 cut(s)	1735
MboI	GATC	8 cut(s)	304, 841, 856, 1393, 1414, 1667, 1893, 1988
MfeI	CAATTG	1 cut(s)	807
MflI	RGATCY	1 cut(s)	304
MhlI	GDGCHC	4 cut(s)	255, 591, 1933, 2059
MlsI	TGGCCA	1 cut(s)	964
MluNI	TGGCCA	1 cut(s)	964
MlyI	GAGTC	2 cut(s)	65, 1838
MmeI	TCCRAC	1 cut(s)	406
Mox20I	TGGCCA	1 cut(s)	964
MroI	TCCGGA	1 cut(s)	634
MroXI	GAANNNNTTC	1 cut(s)	2041
MscI	TGGCCA	1 cut(s)	964
MseI	TTAA	5 cut(s)	644, 735, 882, 1935, 2100
MslI	CAYNNNNRTG	3 cut(s)	345, 347, 1697
Msp20I	TGGCCA	1 cut(s)	964
MspA1I	CMGCKG	1 cut(s)	1945
MspCI	CTTAAG	1 cut(s)	643
MspI	CCGG	4 cut(s)	127, 635, 1051, 1695
MspR9I	CCNGG	2 cut(s)	1594, 1973
MunI	CAATTG	1 cut(s)	807
Mva1269I	GAATGC	1 cut(s)	994
MvaI	CCWGG	2 cut(s)	1594, 1973
MwoI	GCNNNNNNNGC	4 cut(s)	961, 1252, 1337, 1968
NcoI	CCATGG	1 cut(s)	592
NdeI	CATATG	1 cut(s)	1473
NdeII	GATC	8 cut(s)	304, 841, 856, 1393, 1414, 1667, 1893, 1988
NlaIII	CATG	9 cut(s)	65, 396, 596, 617, 722, 1063, 1238, 1274, 1664
NlaIV	GGNNCC	4 cut(s)	261, 1339, 1656, 1808
NmuCI	GTSAC	3 cut(s)	773, 905, 1690
NspV	TTCGAA	1 cut(s)	82
PagI	TCATGA	2 cut(s)	61, 1059
PaqCI	CACCTGC	1 cut(s)	271
PciSI	GCTCTTC	2 cut(s)	1050, 1872
PctI	GAATGC	1 cut(s)	994
PdmI	GAANNNNTTC	1 cut(s)	2041
PfeI	GAWTC	3 cut(s)	560, 618, 1018
PflMI	CCANNNNNTGG	2 cut(s)	1006, 1854
PkrI	GCNGC	2 cut(s)	1944, 2034
PleI	GAGTC	2 cut(s)	64, 1838
PpsI	GAGTC	2 cut(s)	64, 1838
Ppu21I	YACGTR	2 cut(s)	1184, 1760
PpuMI	RGGWCCY	1 cut(s)	1654
PsiI	TTATAA	1 cut(s)	1791
Psp124BI	GAGCTC	1 cut(s)	255
Psp5II	RGGWCCY	1 cut(s)	1654
Psp6I	CCWGG	2 cut(s)	1592, 1971
PspEI	GGTNACC	1 cut(s)	905
PspGI	CCWGG	2 cut(s)	1592, 1971
PspN4I	GGNNCC	4 cut(s)	261, 1339, 1656, 1808
PspPI	GGNCC	1 cut(s)	1654
PspPPI	RGGWCCY	1 cut(s)	1654
PsrI	GAACNNNNNNTAC	2 cut(s)	63, 95
PsuI	RGATCY	1 cut(s)	304
PvuII	CAGCTG	1 cut(s)	1945
RsaI	GTAC	3 cut(s)	825, 1762, 2096
RsaNI	GTAC	3 cut(s)	824, 1761, 2095
RseI	CAYNNNNRTG	3 cut(s)	345, 347, 1697
SacI	GAGCTC	1 cut(s)	255
SapI	GCTCTTC	2 cut(s)	1050, 1872
SaqAI	TTAA	5 cut(s)	644, 735, 882, 1935, 2100
SatI	GCNGC	2 cut(s)	1943, 2033
Sau3AI	GATC	8 cut(s)	304, 841, 856, 1393, 1414, 1667, 1893, 1988
Sau96I	GGNCC	1 cut(s)	1654
SchI	GAGTC	2 cut(s)	65, 1838
ScrFI	CCNGG	2 cut(s)	1594, 1973
SduI	GDGCHC	4 cut(s)	255, 591, 1933, 2059
SfaNI	GCATC	4 cut(s)	823, 1219, 1463, 1550
SfcI	CTRYAG	2 cut(s)	269, 762
SfuI	TTCGAA	1 cut(s)	82
SinI	GGWCC	1 cut(s)	1654
SmiMI	CAYNNNNRTG	3 cut(s)	345, 347, 1697
SmlI	CTYRAG	1 cut(s)	643
SmoI	CTYRAG	1 cut(s)	643
SnaBI	TACGTA	1 cut(s)	1760
SpeI	ACTAGT	1 cut(s)	676
SsiI	CCGC	3 cut(s)	1207, 1735, 1750
SspI	AATATT	3 cut(s)	1079, 1727, 1827
SspMI	CTAG	3 cut(s)	677, 1371, 2090
SstI	GAGCTC	1 cut(s)	255
StyD4I	CCNGG	2 cut(s)	1592, 1971
StyI	CCWWGG	5 cut(s)	30, 246, 581, 592, 1770
TaaI	ACNGT	4 cut(s)	113, 287, 1172, 1868
TaiI	ACGT	4 cut(s)	220, 1186, 1762, 2100
TaqI	TCGA	3 cut(s)	82, 103, 1105
TaqII	GACCGA	1 cut(s)	1797
TfiI	GAWTC	3 cut(s)	560, 618, 1018
Tru1I	TTAA	5 cut(s)	644, 735, 882, 1935, 2100
Tru9I	TTAA	5 cut(s)	644, 735, 882, 1935, 2100
TscAI	CASTG	2 cut(s)	1859, 2034
TseFI	GTSAC	3 cut(s)	773, 905, 1690
TseI	GCWGC	2 cut(s)	1942, 2032
Tsp45I	GTSAC	3 cut(s)	773, 905, 1690
TspDTI	ATGAA	6 cut(s)	207, 602, 735, 1076, 1677, 1715
TspGWI	ACGGA	4 cut(s)	869, 890, 1108, 1500
TspRI	CASTG	2 cut(s)	1859, 2034
Van91I	CCANNNNNTGG	2 cut(s)	1006, 1854
Vha464I	CTTAAG	1 cut(s)	643
VpaK11BI	GGWCC	1 cut(s)	1654
XapI	RAATTY	6 cut(s)	133, 150, 535, 609, 730, 1952
XcmI	CCANNNNNNNNNTGG	2 cut(s)	253, 1426
XmiI	GTMKAC	1 cut(s)	72
XmnI	GAANNNNTTC	1 cut(s)	2041
XspI	CTAG	3 cut(s)	677, 1371, 2090

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.