AT5G14500

Belongs to the glucose-6-phosphate 1-epimerase family

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
arabidopsis_thaliana
5
OG0020227
Physical Location & Seq
Reverse (-)
4674213 .. 4676872
2660 bp
Loading structure...
UTR
Exon/CDS
Intron
AT5G14500.2

Sequence Viewer

Length: 921 bp
ATGCCTTTAAATGTAGTCAATGATCGTGATGGCTCTTCTCGCATTCTTTTGACCGACCCTGCCGGATCAACTGCTGAGGTGCTTTTGTATGGAGGGCAAGTGGTTTCTTGGAAAAACGAAAGGAGAGAGAAGTTGCTTTATATGAGCACCAAGGCGCAATTGAAGCCACCAAAGGCGATCAGGGGAGGGTTACCTATCAGCTTTCCACAGTTTGGAAATTTTGGTGCACTTGAGCGACATGGATTTGCCCGTAACAGATTCTGGTCACTTGATAATGATCCTTCACCTCTGCCTCCGGCTAACCAGCAATCAACTGTTGATTTAGTATTGAAGTCTACTGAAGATGATTTGAAGATATGGCCTCATAGCTTTGAACTTCGTGTTCGCATATCTATCAGTCCTGGAAAACTTACAATAATCCCGCGTGTGAGGAACACTGACACAAAGGCATTTTCCTTTATGTTTTCACTTCGTAACTACTTATATGTATCCGATATAAGTGAAGTTCGGGTTGAGGGTCTGGAGACGCTTGATTATCTGGACAACTTGATGCGTAGAGAAAGATTCACGGAGCAGGCAGATGCAATTACCTTTGACGGCGAGGTTGATAAAGTGTACTTGAACACGCCGACAAAGATTGCCATCATAGATCATGAGAGGAAAAGAACTATCGAGTTGCGAAAGGAAGGCATGCCAAATGCAGCTGTGTGGAACCCTTGGGACAAGAAGGCCAAGAGTATTGCAGATATGGGAGATGAGGATTACACAACAATGCTGTGTGTAGATTCTGGTGCTATAGAAAGCCCAATTGTGTTGAAGCCACATGAAGAGTGGAAAGGAAGACAAGAACTCTCTATCGTCTCCTCAAGCTACTGCAGCGGTCAGCTCGATCCACGTAAGGTTCTTTATGGGGATTACTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
ko00010 ko01100 ko01110 ko01120 ko01130 map00010 map01100 map01110 map01120 map01130
Pfam Domains
Protein Families
Aldose_epim

Protein Analysis

306

Amino Acids

34.79

Weight (kDa)

6.17

Isoelectric Point (pI)

37.66

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Aldose_epim PF01263 14 - 123 2.3e-20 Aldose 1-epimerase
Aldose_epim PF01263 148 - 309 9e-35 Aldose 1-epimerase
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0020227)

Species Orthologous Gene IDs
arabidopsis_thaliana AT3G01590 AT3G01590 AT5G14500
malus_domestica MD17G1023600.v1.1
prunus_persica Prupe.3G292800_v2.0.a1
pyrus_communis pycom17g02010

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB7I CCANNNNNTGG 1 cut(s) 212
AccI GTMKAC 1 cut(s) 335
AccII CGCG 1 cut(s) 424
AciI CCGC 2 cut(s) 422, 879
AclWI GGATC 3 cut(s) 73, 272, 884
AcsI RAATTY 1 cut(s) 217
AcuI CTGAAG 1 cut(s) 360
AfaI GTAC 1 cut(s) 617
AfiI CCNNNNNNNGG 1 cut(s) 212
AgsI TTSAA 6 cut(s) 163, 331, 352, 374, 622, 817
AjnI CCWGG 1 cut(s) 400
AluBI AGCT 5 cut(s) 201, 369, 704, 870, 886
AluI AGCT 5 cut(s) 201, 369, 704, 870, 886
Alw21I GWGCWC 2 cut(s) 149, 229
Alw26I GTCTC 2 cut(s) 518, 865
Alw44I GTGCAC 1 cut(s) 225
AlwI GGATC 3 cut(s) 73, 272, 884
AlwNI CAGNNNCTG 1 cut(s) 261
AoxI GGCC 2 cut(s) 359, 729
ApaLI GTGCAC 1 cut(s) 225
ApeKI GCWGC 2 cut(s) 701, 876
ApoI RAATTY 1 cut(s) 217
AspLEI GCGC 1 cut(s) 157
AsuHPI GGTGA 1 cut(s) 276
BaeGI GKGCMC 1 cut(s) 229
BbsI GAAGAC 1 cut(s) 847
Bbv12I GWGCWC 2 cut(s) 149, 229
BbvCI CCTCAGC 1 cut(s) 75
BbvI GCAGC 2 cut(s) 713, 888
BccI CCATC 2 cut(s) 23, 650
BceAI ACGGC 1 cut(s) 613
BciT130I CCWGG 1 cut(s) 402
BciVI GTATCC 1 cut(s) 499
BcoDI GTCTC 2 cut(s) 518, 865
BfmI CTRYAG 2 cut(s) 795, 874
BfuI GTATCC 1 cut(s) 499
BisI GCNGC 2 cut(s) 702, 877
BlsI GCNGC 2 cut(s) 703, 878
Bme1390I CCNGG 1 cut(s) 402
BmiI GGNNCC 1 cut(s) 713
BmrFI CCNGG 1 cut(s) 402
BmsI GCATC 2 cut(s) 540, 571
BpiI GAAGAC 1 cut(s) 847
BpmI CTGGAG 1 cut(s) 542
Bpu10I CCTNAGC 1 cut(s) 75
BpuEI CTTGAG 2 cut(s) 251, 850
BsaAI YACGTR 1 cut(s) 896
BsaBI GATNNNNATC 2 cut(s) 276, 641
BsaJI CCNNGG 2 cut(s) 150, 716
BsaXI ACNNNNNCTCC 2 cut(s) 84, 114
Bsc4I CCNNNNNNNGG 1 cut(s) 212
Bse8I GATNNNNATC 2 cut(s) 276, 641
BseBI CCWGG 1 cut(s) 402
BseDI CCNNGG 2 cut(s) 150, 716
BseJI GATNNNNATC 2 cut(s) 276, 641
BseLI CCNNNNNNNGG 1 cut(s) 212
BseMII CTCAG 1 cut(s) 66
BseRI GAGGAG 1 cut(s) 853
BseSI GKGCMC 1 cut(s) 229
BseXI GCAGC 2 cut(s) 713, 888
Bsh1236I CGCG 1 cut(s) 424
BshFI GGCC 2 cut(s) 361, 731
BsiHKAI GWGCWC 2 cut(s) 149, 229
BsiSI CCGG 2 cut(s) 63, 296
BslFI GGGAC 1 cut(s) 734
BslI CCNNNNNNNGG 1 cut(s) 212
BsmAI GTCTC 2 cut(s) 518, 865
BsmBI CGTCTC 2 cut(s) 518, 865
BsmFI GGGAC 1 cut(s) 734
BsmI GAATGC 1 cut(s) 42
BsnI GGCC 2 cut(s) 361, 731
Bsp1286I GDGCHC 2 cut(s) 149, 229
Bsp143I GATC 6 cut(s) 22, 65, 177, 277, 649, 889
BspACI CCGC 2 cut(s) 422, 879
BspANI GGCC 2 cut(s) 361, 731
BspCNI CTCAG 1 cut(s) 67
BspFNI CGCG 1 cut(s) 424
BspHI TCATGA 1 cut(s) 652
BspLI GGNNCC 1 cut(s) 713
BspMAI CTGCAG 1 cut(s) 878
BspPI GGATC 3 cut(s) 73, 272, 884
BspQI GCTCTTC 1 cut(s) 40
BssECI CCNNGG 2 cut(s) 150, 716
BssMI GATC 6 cut(s) 22, 65, 177, 277, 649, 889
BssT1I CCWWGG 2 cut(s) 150, 716
Bst2UI CCWGG 1 cut(s) 402
Bst4CI ACNGT 2 cut(s) 210, 316
Bst6I CTCTTC 2 cut(s) 40, 822
BstBAI YACGTR 1 cut(s) 896
BstC8I GCNNGC 2 cut(s) 576, 692
BstDEI CTNAG 1 cut(s) 75
BstEII GGTNACC 1 cut(s) 189
BstFNI CGCG 1 cut(s) 424
BstHHI GCGC 1 cut(s) 157
BstKTI GATC 6 cut(s) 25, 68, 180, 280, 652, 892
BstMAI GTCTC 2 cut(s) 518, 865
BstMBI GATC 6 cut(s) 22, 65, 177, 277, 649, 889
BstMWI GCNNNNNNNGC 3 cut(s) 39, 163, 876
BstNI CCWGG 1 cut(s) 402
BstNSI RCATGY 1 cut(s) 694
BstPI GGTNACC 1 cut(s) 189
BstSCI CCNGG 1 cut(s) 400
BstSFI CTRYAG 2 cut(s) 795, 874
BstSLI GKGCMC 1 cut(s) 229
BstUI CGCG 1 cut(s) 424
BstV1I GCAGC 2 cut(s) 713, 888
BstV2I GAAGAC 1 cut(s) 847
BsuI GTATCC 1 cut(s) 499
BsuRI GGCC 2 cut(s) 361, 731
BtsIMutI CAGTG 1 cut(s) 435
Cac8I GCNNGC 2 cut(s) 576, 692
CaiI CAGNNNCTG 1 cut(s) 261
CciI TCATGA 1 cut(s) 652
CfoI GCGC 1 cut(s) 157
CseI GACGC 1 cut(s) 535
Csp6I GTAC 1 cut(s) 616
CviAII CATG 4 cut(s) 239, 653, 691, 824
CviQI GTAC 1 cut(s) 616
DdeI CTNAG 1 cut(s) 75
DpnI GATC 6 cut(s) 24, 67, 179, 279, 651, 891
DpnII GATC 6 cut(s) 22, 65, 177, 277, 649, 889
DraI TTTAAA 1 cut(s) 9
Eam1104I CTCTTC 2 cut(s) 40, 822
EarI CTCTTC 2 cut(s) 40, 822
Eco130I CCWWGG 2 cut(s) 150, 716
Eco57I CTGAAG 1 cut(s) 360
Eco91I GGTNACC 1 cut(s) 189
EcoO65I GGTNACC 1 cut(s) 189
EcoRII CCWGG 1 cut(s) 400
EcoT14I CCWWGG 2 cut(s) 150, 716
ErhI CCWWGG 2 cut(s) 150, 716
Esp3I CGTCTC 2 cut(s) 518, 865
FaeI CATG 4 cut(s) 242, 656, 694, 827
FaqI GGGAC 1 cut(s) 734
FatI CATG 4 cut(s) 238, 652, 690, 823
FauI CCCGC 1 cut(s) 429
FblI GTMKAC 1 cut(s) 335
Fnu4HI GCNGC 2 cut(s) 702, 877
Fsp4HI GCNGC 2 cut(s) 702, 877
GlaI GCGC 1 cut(s) 156
GluI GCNGC 2 cut(s) 702, 877
GsuI CTGGAG 1 cut(s) 542
HaeIII GGCC 2 cut(s) 361, 731
HapII CCGG 2 cut(s) 63, 296
HgaI GACGC 1 cut(s) 535
HhaI GCGC 1 cut(s) 157
Hin1II CATG 4 cut(s) 242, 656, 694, 827
Hin6I GCGC 1 cut(s) 155
HinP1I GCGC 1 cut(s) 155
HinfI GANTC 3 cut(s) 258, 564, 785
HpaII CCGG 2 cut(s) 63, 296
HphI GGTGA 1 cut(s) 276
Hpy166II GTNNAC 3 cut(s) 227, 336, 616
Hpy188I TCNGA 1 cut(s) 493
Hpy188III TCNNGA 4 cut(s) 26, 521, 539, 653
Hpy8I GTNNAC 3 cut(s) 227, 336, 616
HpyAV CCTTC 3 cut(s) 291, 680, 721
HpyCH4III ACNGT 2 cut(s) 210, 316
HpyCH4IV ACGT 1 cut(s) 895
HpyCH4V TGCA 5 cut(s) 227, 584, 701, 743, 876
HpyF10VI GCNNNNNNNGC 3 cut(s) 39, 163, 876
HpyF3I CTNAG 1 cut(s) 75
HpySE526I ACGT 1 cut(s) 895
Hsp92II CATG 4 cut(s) 242, 656, 694, 827
HspAI GCGC 1 cut(s) 155
Kzo9I GATC 6 cut(s) 22, 65, 177, 277, 649, 889
LguI GCTCTTC 1 cut(s) 40
LmnI GCTCC 1 cut(s) 571
Lsp1109I GCAGC 2 cut(s) 713, 888
LweI GCATC 2 cut(s) 540, 571
MaeII ACGT 1 cut(s) 895
MaeIII GTNAC 4 cut(s) 189, 251, 264, 473
MalI GATC 6 cut(s) 24, 67, 179, 279, 651, 891
MboI GATC 6 cut(s) 22, 65, 177, 277, 649, 889
MboII GAAGA 5 cut(s) 27, 353, 364, 839, 852
MfeI CAATTG 2 cut(s) 158, 807
MhlI GDGCHC 2 cut(s) 149, 229
MluCI AATT 4 cut(s) 158, 217, 585, 807
MseI TTAA 1 cut(s) 8
MslI CAYNNNNRTG 1 cut(s) 770
MspA1I CMGCKG 2 cut(s) 704, 879
MspI CCGG 2 cut(s) 63, 296
MspR9I CCNGG 1 cut(s) 402
MunI CAATTG 2 cut(s) 158, 807
Mva1269I GAATGC 1 cut(s) 42
MvaI CCWGG 1 cut(s) 402
MvnI CGCG 1 cut(s) 424
MwoI GCNNNNNNNGC 3 cut(s) 39, 163, 876
NdeII GATC 6 cut(s) 22, 65, 177, 277, 649, 889
NlaIII CATG 4 cut(s) 242, 656, 694, 827
NlaIV GGNNCC 1 cut(s) 713
NmuCI GTSAC 1 cut(s) 264
NspI RCATGY 1 cut(s) 694
PaeI GCATGC 1 cut(s) 694
PagI TCATGA 1 cut(s) 652
PciSI GCTCTTC 1 cut(s) 40
PctI GAATGC 1 cut(s) 42
PfeI GAWTC 3 cut(s) 258, 564, 785
PflMI CCANNNNNTGG 1 cut(s) 212
PfoI TCCNGGA 1 cut(s) 400
PkrI GCNGC 2 cut(s) 703, 878
Ppu21I YACGTR 1 cut(s) 896
Psp6I CCWGG 1 cut(s) 400
PspEI GGTNACC 1 cut(s) 189
PspGI CCWGG 1 cut(s) 400
PspN4I GGNNCC 1 cut(s) 713
PstI CTGCAG 1 cut(s) 878
PstNI CAGNNNCTG 1 cut(s) 261
PvuII CAGCTG 1 cut(s) 704
RsaI GTAC 1 cut(s) 617
RsaNI GTAC 1 cut(s) 616
RseI CAYNNNNRTG 1 cut(s) 770
SapI GCTCTTC 1 cut(s) 40
SaqAI TTAA 1 cut(s) 8
SatI GCNGC 2 cut(s) 702, 877
Sau3AI GATC 6 cut(s) 22, 65, 177, 277, 649, 889
ScrFI CCNGG 1 cut(s) 402
SduI GDGCHC 2 cut(s) 149, 229
SfaNI GCATC 2 cut(s) 540, 571
SfcI CTRYAG 2 cut(s) 795, 874
SmiMI CAYNNNNRTG 1 cut(s) 770
SmlI CTYRAG 2 cut(s) 230, 865
SmoI CTYRAG 2 cut(s) 230, 865
SphI GCATGC 1 cut(s) 694
Sse9I AATT 4 cut(s) 158, 217, 585, 807
SsiI CCGC 2 cut(s) 422, 879
StyD4I CCNGG 1 cut(s) 400
StyI CCWWGG 2 cut(s) 150, 716
TaaI ACNGT 2 cut(s) 210, 316
TaiI ACGT 1 cut(s) 898
TaqI TCGA 2 cut(s) 672, 888
TaqII GACCGA 1 cut(s) 68
TasI AATT 4 cut(s) 158, 217, 585, 807
TatI WGTACW 1 cut(s) 615
TfiI GAWTC 3 cut(s) 258, 564, 785
Tru1I TTAA 1 cut(s) 8
Tru9I TTAA 1 cut(s) 8
TscAI CASTG 1 cut(s) 442
TseFI GTSAC 1 cut(s) 264
TseI GCWGC 2 cut(s) 701, 876
Tsp45I GTSAC 1 cut(s) 264
TspDTI ATGAA 1 cut(s) 840
TspGWI ACGGA 1 cut(s) 584
TspRI CASTG 1 cut(s) 442
Van91I CCANNNNNTGG 1 cut(s) 212
VneI GTGCAC 1 cut(s) 225
XapI RAATTY 1 cut(s) 217
XceI RCATGY 1 cut(s) 694
XcmI CCANNNNNNNNNTGG 1 cut(s) 828
XmiI GTMKAC 1 cut(s) 335
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.